Trimin1|350842|estExt_Genemark1.C_Ctg_740015 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350842
Unique NameTrimin1|350842|estExt_Genemark1.C_Ctg_740015
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length968
Homology
BLAST of jgi.p|Trimin1|350842 vs. uniprot
Match: A0A836CA89_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA89_9STRA)

HSP 1 Score: 1556 bits (4029), Expect = 0.000e+0
Identity = 967/967 (100.00%), Postives = 967/967 (100.00%), Query Frame = 0
Query:    1 MVRDAPPGIRQEVDLDVGSLGSRLKVAELVDTLNDLVQAARDKDEDITVYLNKARTTFSHLRARMADAKLGRDSRWFDYELELAKHAALAVIRNKLKCAEANDVNVQGLDCTAYMTAVGEVLVSQGTAATAEQEAMERYRRQKAHENLRDIFAEGMGRARVLARAPAAAAAPLRLQSQAVCVRRAAARRSDGSAERRELRCAARXXXXXXXXAHDDSAAAATAEGSDWCRLLLITRTPAVLARAFIDRQEGVISVMKLNALLHENELSTLMANIMTLCRHLDDSLDKPRLPMIYGRGLKPPTIRPLQRGATVPAPWSDAMLAADDGAFRARVLQDLGMLNAGRGGGGAPERSGDAQQRRRLALAPDAFRWHAGRASSAQKRSXXXXXXXXXXXXXXDGLAAPLLPTVAXXXXGAVKKRGADETEXXXXXXXXXXXXXXXXXXXXAEGEAGVPPTPDEAKRLRAAREAAEAVVHNRRGLSTVEQALAEAPSPARPVAVQKRLKLRRSTKENVKNAKAKASPPSPQRKKGLKRAIAGAGXXXXXXXXXXXXXXXXXXXXXXXVVSVKRNGPLDWASHSDSEFESDELVEEEDDEEPEVELEPEEAXXGQGGAAEGAEGXXXXXXXXXLGAPETPGEGGKPRTLRAVQAAHRRALPPRAAVAQRQSSGQRNAPPPPQKRITLSRSPGEQRAALPSALPPPHVSRRVARAFCKVDWTDSQSVDEPLASPGGAAGAIARMGEAQAPGERWVKPLKKTVASGSRGRRFWAASARAGSDGMRGPMPCHLRAAADSRSSTARHQPTKEEEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNITKSDAATARASAAQDAAANGDXXXXXXGLALLGDGSAPPALRPLAPRVLLPGIGLPLAPSPLQLGAAPGAAAGFAPXXXXXXXXXXXXXXXXXXXXXXXAAEGAGAGDGVAPLGMSAAGASNIAQV 967
            MVRDAPPGIRQEVDLDVGSLGSRLKVAELVDTLNDLVQAARDKDEDITVYLNKARTTFSHLRARMADAKLGRDSRWFDYELELAKHAALAVIRNKLKCAEANDVNVQGLDCTAYMTAVGEVLVSQGTAATAEQEAMERYRRQKAHENLRDIFAEGMGRARVLARAPAAAAAPLRLQSQAVCVRRAAARRSDGSAERRELRCAARXXXXXXXXAHDDSAAAATAEGSDWCRLLLITRTPAVLARAFIDRQEGVISVMKLNALLHENELSTLMANIMTLCRHLDDSLDKPRLPMIYGRGLKPPTIRPLQRGATVPAPWSDAMLAADDGAFRARVLQDLGMLNAGRGGGGAPERSGDAQQRRRLALAPDAFRWHAGRASSAQKRSXXXXXXXXXXXXXXDGLAAPLLPTVAXXXXGAVKKRGADETEXXXXXXXXXXXXXXXXXXXXAEGEAGVPPTPDEAKRLRAAREAAEAVVHNRRGLSTVEQALAEAPSPARPVAVQKRLKLRRSTKENVKNAKAKASPPSPQRKKGLKRAIAGAGXXXXXXXXXXXXXXXXXXXXXXXVVSVKRNGPLDWASHSDSEFESDELVEEEDDEEPEVELEPEEAXXGQGGAAEGAEGXXXXXXXXXLGAPETPGEGGKPRTLRAVQAAHRRALPPRAAVAQRQSSGQRNAPPPPQKRITLSRSPGEQRAALPSALPPPHVSRRVARAFCKVDWTDSQSVDEPLASPGGAAGAIARMGEAQAPGERWVKPLKKTVASGSRGRRFWAASARAGSDGMRGPMPCHLRAAADSRSSTARHQPTKEEEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNITKSDAATARASAAQDAAANGDXXXXXXGLALLGDGSAPPALRPLAPRVLLPGIGLPLAPSPLQLGAAPGAAAGFAPXXXXXXXXXXXXXXXXXXXXXXXAAEGAGAGDGVAPLGMSAAGASNIAQV
Sbjct:    1 MVRDAPPGIRQEVDLDVGSLGSRLKVAELVDTLNDLVQAARDKDEDITVYLNKARTTFSHLRARMADAKLGRDSRWFDYELELAKHAALAVIRNKLKCAEANDVNVQGLDCTAYMTAVGEVLVSQGTAATAEQEAMERYRRQKAHENLRDIFAEGMGRARVLARAPAAAAAPLRLQSQAVCVRRAAARRSDGSAERRELRCAARXXXXXXXXAHDDSAAAATAEGSDWCRLLLITRTPAVLARAFIDRQEGVISVMKLNALLHENELSTLMANIMTLCRHLDDSLDKPRLPMIYGRGLKPPTIRPLQRGATVPAPWSDAMLAADDGAFRARVLQDLGMLNAGRGGGGAPERSGDAQQRRRLALAPDAFRWHAGRASSAQKRSXXXXXXXXXXXXXXDGLAAPLLPTVAXXXXGAVKKRGADETEXXXXXXXXXXXXXXXXXXXXAEGEAGVPPTPDEAKRLRAAREAAEAVVHNRRGLSTVEQALAEAPSPARPVAVQKRLKLRRSTKENVKNAKAKASPPSPQRKKGLKRAIAGAGXXXXXXXXXXXXXXXXXXXXXXXVVSVKRNGPLDWASHSDSEFESDELVEEEDDEEPEVELEPEEAXXGQGGAAEGAEGXXXXXXXXXLGAPETPGEGGKPRTLRAVQAAHRRALPPRAAVAQRQSSGQRNAPPPPQKRITLSRSPGEQRAALPSALPPPHVSRRVARAFCKVDWTDSQSVDEPLASPGGAAGAIARMGEAQAPGERWVKPLKKTVASGSRGRRFWAASARAGSDGMRGPMPCHLRAAADSRSSTARHQPTKEEEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNITKSDAATARASAAQDAAANGDXXXXXXGLALLGDGSAPPALRPLAPRVLLPGIGLPLAPSPLQLGAAPGAAAGFAPXXXXXXXXXXXXXXXXXXXXXXXAAEGAGAGDGVAPLGMSAAGASNIAQV 967          
BLAST of jgi.p|Trimin1|350842 vs. uniprot
Match: A0A6B2G6N2_MYXSQ (Telomeric repeat-binding factor 1 (Trinotate prediction) (Fragment) n=1 Tax=Myxobolus squamalis TaxID=59785 RepID=A0A6B2G6N2_MYXSQ)

HSP 1 Score: 73.2 bits (178), Expect = 9.880e-11
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0
Query:  798 TKEEEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNI 841
            T EEE YL DGVK YG+G W+ IL  Y F NRT+VNLKDKWRNI
Sbjct:  169 TTEEENYLLDGVKKYGKGNWSTILNNYEFNNRTNVNLKDKWRNI 212          
BLAST of jgi.p|Trimin1|350842 vs. uniprot
Match: A0A7L2RW97_9PASS (TERF2 factor (Fragment) n=1 Tax=Neodrepanis coruscans TaxID=254563 RepID=A0A7L2RW97_9PASS)

HSP 1 Score: 66.2 bits (160), Expect = 4.080e-10
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0
Query:  798 TKEEEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNITK 843
            T EE  ++++GVK YGEGRW  I + YPF+NRTSV +KD+WR + K
Sbjct:    3 TIEESEWIKEGVKKYGEGRWKSICQKYPFQNRTSVMIKDRWRTMKK 48          
BLAST of jgi.p|Trimin1|350842 vs. uniprot
Match: A0A7L3MSN6_9PASS (TERF2 factor (Fragment) n=1 Tax=Horornis vulcanius TaxID=2585811 RepID=A0A7L3MSN6_9PASS)

HSP 1 Score: 66.2 bits (160), Expect = 6.210e-10
Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 0
Query:  798 TKEEEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNITK 843
            T +E  ++++GVK YGEGRW  I + YPF+NRTSV +KD+WR + K
Sbjct:   19 TVQESEWIKEGVKKYGEGRWKAICQKYPFQNRTSVMIKDRWRTMKK 64          
BLAST of jgi.p|Trimin1|350842 vs. uniprot
Match: A0A7L3WF39_9GRUI (TERF2 factor (Fragment) n=1 Tax=Atlantisia rogersi TaxID=2478892 RepID=A0A7L3WF39_9GRUI)

HSP 1 Score: 64.3 bits (155), Expect = 2.960e-9
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 0
Query:  798 TKEEEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNITK 843
            T +E  ++++GVK YGEGRW  I + YPF+NRT+V +KD+WR + K
Sbjct:   19 TIQESEWIKEGVKKYGEGRWKAICQKYPFQNRTAVMVKDRWRTMKK 64          
BLAST of jgi.p|Trimin1|350842 vs. uniprot
Match: A0A0Q3PVK0_AMAAE (Uncharacterized protein n=1 Tax=Amazona aestiva TaxID=12930 RepID=A0A0Q3PVK0_AMAAE)

HSP 1 Score: 64.7 bits (156), Expect = 3.360e-9
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 0
Query:  798 TKEEEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNITK 843
            T EE  +++DGV+ +GEGRW  I + YPF+NRT+V +KD+WR + K
Sbjct:   35 TVEESEWIKDGVQKFGEGRWKTICQKYPFQNRTAVMIKDRWRTMKK 80          
BLAST of jgi.p|Trimin1|350842 vs. uniprot
Match: A0A7K5VTM8_9CORV (TERF2 factor (Fragment) n=1 Tax=Platysteira castanea TaxID=1160851 RepID=A0A7K5VTM8_9CORV)

HSP 1 Score: 63.9 bits (154), Expect = 4.050e-9
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0
Query:  798 TKEEEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNITK 843
            T +E  ++++GVK YGEGRW  I   YPFENRT V +KD+WR + K
Sbjct:   19 TMQESEWIKEGVKKYGEGRWKAICLKYPFENRTPVMIKDRWRTMKK 64          
BLAST of jgi.p|Trimin1|350842 vs. uniprot
Match: A0A7K4S436_COLPI (TERF2 factor (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7K4S436_COLPI)

HSP 1 Score: 63.2 bits (152), Expect = 4.970e-9
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
Query:  798 TKEEEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNITK 843
            T +E  +++ GVK +GEGRW  I E YPF+NRT V +KD+WR + K
Sbjct:    3 TVQESEWIKSGVKKFGEGRWKAICEKYPFQNRTPVMIKDRWRTMKK 48          
BLAST of jgi.p|Trimin1|350842 vs. uniprot
Match: A0A7K7YKQ3_THRLU (TERF2 factor (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7K7YKQ3_THRLU)

HSP 1 Score: 63.2 bits (152), Expect = 8.670e-9
Identity = 24/46 (52.17%), Postives = 34/46 (73.91%), Query Frame = 0
Query:  798 TKEEEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNITK 843
            T +E  ++++GVK YGEGRW  I   YPF+NRT+V +KD+WR + K
Sbjct:   24 TLQESEWIKEGVKKYGEGRWKAICLRYPFQNRTAVMIKDRWRTMKK 69          
BLAST of jgi.p|Trimin1|350842 vs. uniprot
Match: A0A6G3MIH3_HENSL (Telomeric repeat-binding factor 1 (Trinotate prediction) (Fragment) n=1 Tax=Henneguya salminicola TaxID=69463 RepID=A0A6G3MIH3_HENSL)

HSP 1 Score: 67.8 bits (164), Expect = 9.060e-9
Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 0
Query:  782 LRAAADSRSSTARHQPTKEEEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNITK 843
            L   + S +   R    K+EE  L DGVKIYG+G WAVI   Y F NRT+++L DKWRN+ K
Sbjct:  170 LNEVSTSLNRRVRRSWKKDEEKNLIDGVKIYGKGNWAVIRSHYKFNNRTNIDLSDKWRNLEK 231          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350842 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CA89_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6B2G6N2_MYXSQ9.880e-1170.45Telomeric repeat-binding factor 1 (Trinotate predi... [more]
A0A7L2RW97_9PASS4.080e-1056.52TERF2 factor (Fragment) n=1 Tax=Neodrepanis corusc... [more]
A0A7L3MSN6_9PASS6.210e-1054.35TERF2 factor (Fragment) n=1 Tax=Horornis vulcanius... [more]
A0A7L3WF39_9GRUI2.960e-952.17TERF2 factor (Fragment) n=1 Tax=Atlantisia rogersi... [more]
A0A0Q3PVK0_AMAAE3.360e-952.17Uncharacterized protein n=1 Tax=Amazona aestiva Ta... [more]
A0A7K5VTM8_9CORV4.050e-954.35TERF2 factor (Fragment) n=1 Tax=Platysteira castan... [more]
A0A7K4S436_COLPI4.970e-952.17TERF2 factor (Fragment) n=3 Tax=Neognathae TaxID=8... [more]
A0A7K7YKQ3_THRLU8.670e-952.17TERF2 factor (Fragment) n=2 Tax=Passeriformes TaxI... [more]
A0A6G3MIH3_HENSL9.060e-950.00Telomeric repeat-binding factor 1 (Trinotate predi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 793..844
e-value: 1.6E-4
score: 31.0
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 789..842
score: 7.386894
NoneNo IPR availableGENE3D1.10.10.60coord: 788..845
e-value: 3.3E-14
score: 54.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 419..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 419..702
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 909..955
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 659..681
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 718..745
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 915..929
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 581..608
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..472
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 544..558
NoneNo IPR availablePANTHERPTHR46734TELOMERIC REPEAT-BINDING FACTOR 1 TERF1coord: 453..845
NoneNo IPR availableCDDcd11660SANT_TRFcoord: 798..843
e-value: 3.8098E-18
score: 76.8371
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 798..841
e-value: 1.9E-7
score: 31.2
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 798..846
score: 13.80508
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 798..851

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_74contigContig_74:152837..168054 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350842mRNA_10521Tribonema minus UTEX_B_3156 mRNAContig_74 152837..168054 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350842|estExt_Genemark1.C_Ctg_740015 ID=Trimin1|350842|estExt_Genemark1.C_Ctg_740015|Name=jgi.p|Trimin1|350842|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=968bp
MVRDAPPGIRQEVDLDVGSLGSRLKVAELVDTLNDLVQAARDKDEDITVY
LNKARTTFSHLRARMADAKLGRDSRWFDYELELAKHAALAVIRNKLKCAE
ANDVNVQGLDCTAYMTAVGEVLVSQGTAATAEQEAMERYRRQKAHENLRD
IFAEGMGRARVLARAPAAAAAPLRLQSQAVCVRRAAARRSDGSAERRELR
CAARCRSRARPRAHDDSAAAATAEGSDWCRLLLITRTPAVLARAFIDRQE
GVISVMKLNALLHENELSTLMANIMTLCRHLDDSLDKPRLPMIYGRGLKP
PTIRPLQRGATVPAPWSDAMLAADDGAFRARVLQDLGMLNAGRGGGGAPE
RSGDAQQRRRLALAPDAFRWHAGRASSAQKRSKAAAAAAAAATAAADGLA
APLLPTVAAAAAGAVKKRGADETETDDEAKGGGGKGKGKAKRPRAEGEAG
VPPTPDEAKRLRAAREAAEAVVHNRRGLSTVEQALAEAPSPARPVAVQKR
LKLRRSTKENVKNAKAKASPPSPQRKKGLKRAIAGAGGGSSAESDDGYAS
SSSSGDGAVVVVSVKRNGPLDWASHSDSEFESDELVEEEDDEEPEVELEP
EEAEEGQGGAAEGAEGGGGAEGQAGLGAPETPGEGGKPRTLRAVQAAHRR
ALPPRAAVAQRQSSGQRNAPPPPQKRITLSRSPGEQRAALPSALPPPHVS
RRVARAFCKVDWTDSQSVDEPLASPGGAAGAIARMGEAQAPGERWVKPLK
KTVASGSRGRRFWAASARAGSDGMRGPMPCHLRAAADSRSSTARHQPTKE
EEGYLRDGVKIYGEGRWAVILEAYPFENRTSVNLKDKWRNITKSDAATAR
ASAAQDAAANGDGGDGGGGLALLGDGSAPPALRPLAPRVLLPGIGLPLAP
SPLQLGAAPGAAAGFAPPPLLPQQPPQQQQGLEPPEGGGGAAEGAGAGDG
VAPLGMSAAGASNIAQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf