mRNA_12868 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350819
Unique NamemRNA_12868
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|350819 vs. uniprot
Match: A0A835YV25_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV25_9STRA)

HSP 1 Score: 748 bits (1932), Expect = 8.570e-271
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 1
Query:    1 MRKKRRRSLSDKPPPGVEGEDFVLIPWTPEQLKSIRAKAKAEADASVSPAVAWQRASKGRNVKLKQSLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAGTGNLTQAILDAHKGDISHLTLVELDRDMARKLADRIDAQGYEFTVMEGNDRTPAQSIRFTRAMKASAAVPGGDGARRDVGVDIERCDVLSARLPPFDVLLSNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGFVDKAAARPGHPLYGAPSXXXXXXXXXXXXXXVLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTPLGDSAAEARHVFQQTSSSELLVTYRRFLEACFRSRNRKLRGILRDGVTAVPSAPHQPSDEFIRVKVDELISSQGLLEKRPNSTGVREFCTLFVRLHEAGLQLK 1314
            MRKKRRRSLSDKPPPGVEGEDFVLIPWTPEQLKSIRAKAKAEADASVSPAVAWQRASKGRNVKLKQSLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAGTGNLTQAILDAHKGDISHLTLVELDRDMARKLADRIDAQGYEFTVMEGNDRTPAQSIRFTRAMKASAAVPGGDGARRDVGVDIERCDVLSARLPPFDVLLSNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGFVDKAAARPGHPLYGAPSXXXXXXXXXXXXXXVLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTPLGDSAAEARHVFQQTSSSELLVTYRRFLEACFRSRNRKLRGILRDGVTAVPSAPHQPSDEFIRVKVDELISSQGLLEKRPNSTGVREFCTLFVRLHEAGLQLK
Sbjct:    1 MRKKRRRSLSDKPPPGVEGEDFVLIPWTPEQLKSIRAKAKAEADASVSPAVAWQRASKGRNVKLKQSLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAGTGNLTQAILDAHKGDISHLTLVELDRDMARKLADRIDAQGYEFTVMEGNDRTPAQSIRFTRAMKASAAVPGGDGARRDVGVDIERCDVLSARLPPFDVLLSNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGFVDKAAARPGHPLYGAPSXXXXXXXXXXXXXXVLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTPLGDSAAEARHVFQQTSSSELLVTYRRFLEACFRSRNRKLRGILRDGVTAVPSAPHQPSDEFIRVKVDELISSQGLLEKRPNSTGVREFCTLFVRLHEAGLQLK 438          
BLAST of jgi.p|Trimin1|350819 vs. uniprot
Match: A0E6J3_PARTE (rRNA adenine N(6)-methyltransferase n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0E6J3_PARTE)

HSP 1 Score: 82.8 bits (203), Expect = 1.050e-13
Identity = 80/277 (28.88%), Postives = 111/277 (40.07%), Query Frame = 1
Query:  181 NVKLKQSLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAGTGNLTQAILDAHKGDISHLTLVELDRDMARKLADRIDAQGY--EFTVMEGNDRTPAQSIRFTRAMKASAAVPGGDGARRDVGVDIERCDVLSARLPPFDVLLSNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGFVDKAAARPGHPLYGAPSXXXXXXXXXXXXXXVLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTP 1005
            N+   +S  QH+L +Q +L  +V ++A+   D VLEIG GTGNLT+ +L   K     +  VE+D  M  +L  R     Y  +F +++G                                      D L+A LP FD+ ++N PY IS  L+ +L  LA  P +R AVLM Q+EF                                    +  A+PG+ LY   S                 Q   RV+ L  +G  NF PPPKV S VVR  P
Sbjct:    9 NMVFNKSFGQHILINQQILQMIVDKSAIRPTDIVLEIGPGTGNLTELLLQRAK----QVICVEIDPRMVIELTKRFKYSQYSDKFKLIQG--------------------------------------DFLTAELPFFDLCVANVPYQISSPLVFKL--LAQRPLWRCAVLMFQQEF----------------------------------AFRLVAKPGNELYCRLSAN--------------VQMLSRVDHLMKVGKNNFKPPPKVESSVVRIEP 193          
BLAST of jgi.p|Trimin1|350819 vs. uniprot
Match: A0A6A7FXU9_9CRUS (rRNA adenine N(6)-methyltransferase n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FXU9_9CRUS)

HSP 1 Score: 80.1 bits (196), Expect = 8.230e-13
Identity = 99/373 (26.54%), Postives = 144/373 (38.61%), Query Frame = 1
Query:  199 SLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAGTGNLTQAILDAHKGDISHLTLVELDRDMARKLADRIDAQGYEFTVMEGNDRTPAQSIRFTRAMKASAAVPGGDGARRDVGVDIERCDVLSARLPPFDVLLSNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGFVDKAAARPGHPLYGAPSXXXXXXXXXXXXXXVLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTPLGDSAAEARHVFQQTSSSELLVTYRRF--LEACFRSRN--RKLRGILRDGVTAVPSAPHQPSDEFIRVKVDELISSQGLLEKRPNSTGVREFCTLFVRLHEAGL 1305
            S+ QH+L +  ++  ++ +AAV   D VLE+G GTGN+TQ +L+  K     +   E+D  M  +L  R                TP  +                        +DI   DVL + LP FD+ +SN PY IS   + +L  L   P +R AVLM Q+EF                                    +  A+PG  LY   S              V  Q   +++ L  +G  NF PPPKV S VVR  P           FQ+      +V  R+   L A F+  +  + LR   R  V         P D  ++ KV E+++   L   R  S    EF  L +  ++AG+
Sbjct:   71 SIGQHILKNPLIITNMLDKAAVKSTDTVLEVGPGTGNMTQKLLERAK----LIVACEVDPRMVAELHKRFVG-------------TPFYNK-----------------------LDIRIGDVLKSTLPAFDICVSNLPYQISSPFVFKL--LLHRPIFRCAVLMFQQEF----------------------------------AQRLVAKPGSKLYCRLS--------------VNTQLLAKIDHLMKVGKNNFKPPPKVESSVVRIEPRNPLP---NINFQEWDGMLRIVFVRKSKTLLAAFKQTSVIKTLRANYR--VWCTKHGRRVPEDLDMKAKVTEVLTGCELASSRARSMEQEEFMKLLLAFNKAGI 348          
BLAST of jgi.p|Trimin1|350819 vs. uniprot
Match: A0A5C2SHK5_9APHY (rRNA adenine N(6)-methyltransferase n=2 Tax=Lentinus tigrinus TaxID=5365 RepID=A0A5C2SHK5_9APHY)

HSP 1 Score: 78.2 bits (191), Expect = 2.760e-12
Identity = 103/413 (24.94%), Postives = 159/413 (38.50%), Query Frame = 1
Query:  100 SIRAKAKAEADASVSPAVAWQRASKGRN-VKLKQSLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAGTGNLTQAILDAHKGDISHLTLVELDRDMARKLADRIDAQGYEFTVMEGNDRTPAQSIRFTRAMKASAAVPGGDGARRDVGVDIERCDVLSARLPPFDVLLSNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGFVDKAAARPGHPLYGAPSXXXXXXXXXXXXXXVLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTP--------LGDSAAEARHVFQQTSSSELLVTYRRFLEACFRSRNRKLRGILRDGVTAVPSAPHQPSDEFI--RVKVDELISSQGLLEKRPNSTGVREFCTLFVRLHEAGL 1305
            S ++K+KA ++AS S  V        RN +   +   QH+L +  +   +V++A +   D VLE+G GTGNLTQ +L   K    H+T VE+D  MA ++  R+                                   G   +R + + I   D + A LP FDV +SN PY IS  L+ RL  L+  P +RVA+LM Q+EF                                    +  A+PG   +   S                 Q +  V     +G  NF PPPKV S V+R  P         G+    AR VF + + +         + A F ++   +  +L        S      ++ I  + KV+E++   G  + R     + +   L    H AG+
Sbjct:   16 SAKSKSKASSEASSSSGV--------RNPIFNTERFGQHILQNPKIAEEIVQKAGLRPTDKVLEVGPGTGNLTQYMLAQAK----HVTAVEMDPRMAAEVTKRVQ----------------------------------GKPEQRKLEIIIG--DFVKATLPYFDVCISNTPYQISSPLIFRL--LSHRPLFRVAILMFQKEF----------------------------------ALRLVAKPGSDAWSRLSAN--------------VQLYAEVNIAMDVGRNNFRPPPKVESTVIRLVPRDPPPPVEFGEFDGLARIVFGRRNKT---------VHANFMAKG--VMEMLESNWKTWASVNDMIVEDNINFKKKVEEVLEESGFSQSRAAKMDINDLLNLLSAFHNAGI 319          
BLAST of jgi.p|Trimin1|350819 vs. uniprot
Match: A0A7S4J4C0_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4C0_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.900e-11
Identity = 76/282 (26.95%), Postives = 112/282 (39.72%), Query Frame = 1
Query:  169 SKGRN-VKLKQSLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAGTGNLTQAILDAHKGDISHLTLVELDRDMARKLADRIDA--QGYEFTVMEGNDRTPAQSIRFTRAMKASAAVPGGDGARRDVGVDIERCDVLSARLPPFDVLLSNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGFVDKAAARPGHPLYGAPSXXXXXXXXXXXXXXVLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTP 1005
            S GRN +     L QH L +  ++  +V ++AV   D VLEIG GTGN+T+ + +  K  ++    +E D  M R++  R++     ++  V++G                                      D +    P FD+ ++N PY IS  L+ +L  LA  P +R AV+M QEEF                                    + +A+PG  LY   S              V  Q   +V+ L  +G  NF PPPKV SRVVR  P
Sbjct:  110 SAGRNLIAPNTGLGQHFLKNPAVVTGIVAKSAVKPTDVVLEIGPGTGNMTEPLCEQAKSVVA----IEYDTRMVREVLKRVEGTPNEHKLRVIQG--------------------------------------DAIKTAWPFFDLCVANVPYQISSPLVFKL--LAHRPMFRCAVMMFQEEF----------------------------------ALRLSAKPGEALYCRLS--------------VNTQLLAKVDQLMKVGRNNFRPPPKVESRVVRIEP 299          
BLAST of jgi.p|Trimin1|350819 vs. uniprot
Match: A0A5J5BRD0_9ASTE (rRNA adenine N(6)-methyltransferase n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BRD0_9ASTE)

HSP 1 Score: 75.1 bits (183), Expect = 4.760e-11
Identity = 80/282 (28.37%), Postives = 115/282 (40.78%), Query Frame = 1
Query:  184 VKLKQSLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAGTGNLTQAILDAHKGDISHLTLVELDRDMARKLADRIDAQGYEFTVMEGNDRTPAQS-IRFTRAMKASAAVPGGD-------GARRDVGVDIERCDVLSARLPPFDVLLSNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGFVDKAAARPGHPLYGAPSXXXXXXXXXXXXXXVLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTP 1005
            +   +S  QH+L +  L+  ++++A +   D +LEIG GTGNLT+ +L+A K  ++    VE+D  M  +L  R   QG           +P  S ++   A   +  +P  D          +     + + DVL   LP FD+ ++N PY IS  L  +L  L   P +R AV+M Q EF                                    +  A+PG  LY   S              V  Q   RV  L  +G  NF PPPKV S VVR  P
Sbjct:   27 ISFHKSKGQHILKNPLLIDTIIQKAGIKSTDAILEIGPGTGNLTKKLLEAGKSVVA----VEIDPRMVLELQRRF--QG-----------SPLSSRLKGIGAFGITIEIPEVDDLLAHNNNLSQRTEARVIQGDVLKCDLPYFDICVANIPYQISSPLTFKL--LFHRPLFRCAVIMFQREF----------------------------------AMRLVAQPGDTLYCRLS--------------VNTQLMARVFHLLKVGRNNFRPPPKVDSSVVRIEP 241          
BLAST of jgi.p|Trimin1|350819 vs. uniprot
Match: T1IS59_STRMM (rRNA adenine N(6)-methyltransferase n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IS59_STRMM)

HSP 1 Score: 73.6 bits (179), Expect = 8.280e-11
Identity = 92/379 (24.27%), Postives = 146/379 (38.52%), Query Frame = 1
Query:  178 RNVKLKQSLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAGTGNLTQAILDAHKGDISHLTLVELDRDMARKLADRIDAQGYEFTVMEGNDRTPAQSIRFTRAMKASAAVPGGDGARRDVGVDIERCDVLSARLPPFDVLLSNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGFVDKAAARPGHPLYGAPSXXXXXXXXXXXXXXVLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTPLGDSAAEARHVFQQTSSSELLVTYRR--FLEACFRSRNRKLRGILRDGVTAVPSAPHQPSDEF-IRVKVDELISSQGLLEKRPNSTGVREFCTLFVRLHEAGL 1305
            + ++   +L QH+L +  ++  +V ++A+   D VLEIG GTGN+TQ +L+  K  ++    VE+D  +  +L  R     Y                      K +  V  GD  R D               P FD+ ++N PY IS  L+ +L  L   P +R A+LM Q EF                                    +  A+PG  LY   S              +  Q   RV+ L  IG  NF PPPKV S +VR  P           FQ+      L   R+   L A F+ ++  L  ++++            +D+F ++ K +E++     LE+R     + +F  L    +  G+
Sbjct:   19 QGIRFNTNLGQHILKNPLVIQSIVDKSAIRPTDVVLEIGPGTGNMTQKLLEKGKKVLA----VEIDTRLVAELQKRFQTSPYY--------------------SKLNIIV--GDALRTD--------------FPFFDICVANIPYQISSSLVFKL--LLHRPFFRCAILMFQREF----------------------------------AQRLIAKPGEKLYCRLS--------------INVQLLARVDHLMKIGKNNFRPPPKVESSIVRIEPRNPPPPIN---FQEWDGLVRLAFLRKNKTLGAIFKQKS-VLEMLMKNYQIHASVKNEVITDDFNMKAKAEEILLGCEFLEQRARHMDIDDFLRLLYAFNSNGI 303          
BLAST of jgi.p|Trimin1|350819 vs. uniprot
Match: A0A2U1LSE3_ARTAN (rRNA adenine N(6)-methyltransferase n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LSE3_ARTAN)

HSP 1 Score: 75.1 bits (183), Expect = 8.400e-11
Identity = 83/291 (28.52%), Postives = 116/291 (39.86%), Query Frame = 1
Query:  184 VKLKQSLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAGTGNLTQAILDAHKGDISHLTLVELDRDMARKLADRI---------------DAQGYEFTVMEGNDRTPAQSIRFTRAM--KASAAVPGGDGARRDVGVDIERCDVLSARLPPFDVLLSNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGFVDKAAARPGHPLYGAPSXXXXXXXXXXXXXXVLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTP 1005
            ++  +S  QH+L +  L+  +V++A +   D VLEIG GTGNLT+ +L+A K  I+    VELD  M  +L  R                D Q Y ++++          + F R    K    V     A   + + I + DVL   LP FD+ ++N PY IS  L  +L+     P +R AV+M Q EF                                    +  A+P    Y   S              V  Q   RV  L  +G  NF PPPKV S VVR  P
Sbjct:  138 IQFHKSKGQHILKNPLLVDAIVQKAGINSTDVVLEIGPGTGNLTKKLLEAGKSVIA----VELDSRMVLELQRRFQGTPHSNRLKASLGNDDQRYLYSIIGAVLCALLSKVLFARQSDPKLHLLVLYNALADGSLTLLIIQGDVLKCDLPYFDICVANIPYQISSPLTFKLLNHR--PLFRCAVIMFQREF----------------------------------AMRLVAQPRDSQYCRLS--------------VNTQLLARVSHLLKVGKNNFRPPPKVDSSVVRIEP 374          
BLAST of jgi.p|Trimin1|350819 vs. uniprot
Match: A0A197K7C9_9FUNG (rRNA adenine N(6)-methyltransferase n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A197K7C9_9FUNG)

HSP 1 Score: 73.6 bits (179), Expect = 1.000e-10
Identity = 78/270 (28.89%), Postives = 108/270 (40.00%), Query Frame = 1
Query:  196 QSLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAGTGNLTQAILDAHKGDISHLTLVELDRDMARKLADRIDAQGYEFTVMEGNDRTPAQSIRFTRAMKASAAVPGGDGARRDVGVDIERCDVLSARLPPFDVLLSNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGFVDKAAARPGHPLYGAPSXXXXXXXXXXXXXXVLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTP 1005
            + L QH+L +  +   +V +A +   D VLEIG GTGNLT  IL+  K  ++    VE+D  +A +L  R+               TP Q                         ++I   D + A+LP FDV +SN PY IS  L+ +L+E    P +R +VLM Q EF                                    +  A+PG  LY   S              V  Q F +VE +  +G  NF PPP+V S VVR  P
Sbjct:   45 KDLGQHILKNPLVAQGIVDKAYLRPTDTVLEIGPGTGNLTVKILEKCKKVVA----VEMDPRLAAELQKRVHG-------------TPDQKK-----------------------LEIMIGDFMKAKLPYFDVCISNTPYQISSVLVFKLLEHR--PVFRSSVLMFQREF----------------------------------ALRLVAKPGDSLYCRLS--------------VNVQLFAKVEHIMKVGKNNFRPPPQVESSVVRMEP 224          
BLAST of jgi.p|Trimin1|350819 vs. uniprot
Match: A0A662HEY1_9CREN (Probable ribosomal RNA small subunit methyltransferase A n=2 Tax=Thermoprotei archaeon TaxID=2250277 RepID=A0A662HEY1_9CREN)

HSP 1 Score: 72.0 bits (175), Expect = 1.670e-10
Identity = 84/318 (26.42%), Postives = 118/318 (37.11%), Query Frame = 1
Query:  184 VKLKQSLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAGTGNLTQAILDAHKGDISHLTLVELDRDMARKLADRIDAQGYEFTVMEGNDRTPAQSIRFTRAMKASAAVPGGDGARRDVGVDIERCDVLSARLPPFDVLLSNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGFVDKAAARPGHPLYGAPSXXXXXXXXXXXXXXVLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTPLGDSAAEARHVFQQTSSSELLVTYRRFLEACFRSRNRKLRGILR 1137
            ++ ++ LSQ+ +  +G L  +V       GD V EIGAG G LT  +  A +G  + +  VE+DR +   L DR                                        R D  VD+   D LS  +P  D ++SN PYAIS +LL +L+     P YRVAVL LQ EF                                    +  ARPG   YG  S              V+ Q +  VE +  +  + F P P+V S V+R  P      E R  F+       ++         F  R RKL  ++R
Sbjct:   17 IRPRRRLSQNFIVSEGALRLIVDALGPGPGDRVYEIGAGLGTLTLEL--ARRG--AAVIAVEVDRRLVEVLRDRF---------------------------------------RGDSLVDVVCSDALSTPVPRVDGVVSNVPYAISSRLLLKLLR---EPSYRVAVLTLQREF----------------------------------ALRLVARPGTAQYGRIS--------------VITQLYSEVEVVGSVSRRAFYPQPEVDSLVIRLRP----RMENREFFRDVEKLTAIL---------FSQRRRKLAKVVR 227          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350819 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YV25_9STRA8.570e-271100.00rRNA adenine N(6)-methyltransferase n=1 Tax=Tribon... [more]
A0E6J3_PARTE1.050e-1328.88rRNA adenine N(6)-methyltransferase n=2 Tax=Parame... [more]
A0A6A7FXU9_9CRUS8.230e-1326.54rRNA adenine N(6)-methyltransferase n=2 Tax=Hirond... [more]
A0A5C2SHK5_9APHY2.760e-1224.94rRNA adenine N(6)-methyltransferase n=2 Tax=Lentin... [more]
A0A7S4J4C0_9STRA3.900e-1126.95rRNA adenine N(6)-methyltransferase n=1 Tax=Odonte... [more]
A0A5J5BRD0_9ASTE4.760e-1128.37rRNA adenine N(6)-methyltransferase n=1 Tax=Nyssa ... [more]
T1IS59_STRMM8.280e-1124.27rRNA adenine N(6)-methyltransferase n=1 Tax=Striga... [more]
A0A2U1LSE3_ARTAN8.400e-1128.52rRNA adenine N(6)-methyltransferase n=1 Tax=Artemi... [more]
A0A197K7C9_9FUNG1.000e-1028.89rRNA adenine N(6)-methyltransferase n=2 Tax=Mortie... [more]
A0A662HEY1_9CREN1.670e-1026.42Probable ribosomal RNA small subunit methyltransfe... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_73contigContig_73:384483..389072 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350819|estExt_Genemark1.C_Ctg_730038
BRITEko00000,ko01000,ko03009
KEGG rclassRC00003,RC03257
KEGG ReactionR10716
KEGG koko:K14191
EC2.1.1.183
GOsGO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
DescriptionBelongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
COG categoryA
Max annot lvl554915|Amoebozoa
EggNOG OGsCOG0030@1|root,KOG0820@2759|Eukaryota,3X8AT@554915|Amoebozoa
Evalue1.38e-17
Seed ortholog44689.DDB0266789
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-10_001390.3
TranscriptId351141
TrackFilteredModels1
ProteinId350819
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350819gene_12868Tribonema minus UTEX_B_3156 geneContig_73 384483..389072 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350819Trimin1|350819|estExt_Genemark1.C_Ctg_730038Tribonema minus UTEX_B_3156 polypeptideContig_73 384499..389072 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12868_9exon_12868_9Tribonema minus UTEX_B_3156 exonContig_73 384483..384733 -
exon_12868_8exon_12868_8Tribonema minus UTEX_B_3156 exonContig_73 385082..385143 -
exon_12868_7exon_12868_7Tribonema minus UTEX_B_3156 exonContig_73 386217..386378 -
exon_12868_6exon_12868_6Tribonema minus UTEX_B_3156 exonContig_73 386515..386556 -
exon_12868_5exon_12868_5Tribonema minus UTEX_B_3156 exonContig_73 387120..387137 -
exon_12868_4exon_12868_4Tribonema minus UTEX_B_3156 exonContig_73 387237..387320 -
exon_12868_3exon_12868_3Tribonema minus UTEX_B_3156 exonContig_73 387398..387607 -
exon_12868_2exon_12868_2Tribonema minus UTEX_B_3156 exonContig_73 388218..388403 -
exon_12868_1exon_12868_1Tribonema minus UTEX_B_3156 exonContig_73 388755..389072 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_12868UTR3_12868Tribonema minus UTEX_B_3156 three_prime_UTRContig_73 384483..384498 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12868CDS_12868Tribonema minus UTEX_B_3156 CDSContig_73 388755..389072 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12868 ID=mRNA_12868|Name=jgi.p|Trimin1|350819|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1333bp|location=Sequence derived from alignment at Contig_73:384483..389072- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGAAGAAACGAAGACGCAGCCTGAGCGACAAGCCTCCTCCGGGCGT
AGAGGGAGAGGACTTCGTGCTGATACCTTGGACACCGGAGCAGCTGAAAA
GCATCAGGGCGAAGGCAAAAGCGGAGGCAGACGCTTCAGTGAGTCCAGCT
GTCGCCTGGCAGCGCGCCAGCAAGGGCAGGAACGTGAAGCTCAAGCAAAG
TCTGAGCCAGCACTTGCTGACGGATCAGGGGCTGCTGGGCTATGTTGTGA
GGCAAGCAGCTGTGGCGGAGGGGGATCACGTTTTGGAGATTGGTGCCGGC
ACAGGAAATCTCACTCAGGCCATACTGGACGCGCACAAGGGCGACATCTC
TCACCTGACGCTCGTGGAGCTGGACAGGGACATGGCGCGCAAGCTTGCGG
ACCGCATCGACGCTCAGGGCTACGAGTTTACGGTGATGGAGGGCAACGAC
CGCACGCCCGCGCAGAGCATCCGCTTCACGCGTGCGATGAAGGCGAGCGC
TGCTGTGCCGGGCGGCGACGGCGCGCGCCGCGACGTCGGCGTGGACATTG
AGCGCTGCGACGTGCTGTCCGCGCGCCTGCCGCCGTTTGACGTGCTGCTG
TCCAACGCGCCGTACGCCATCAGCCGCAAGCTGCTGGAGCGGCTCGTGGA
GCTCGCGCTCGCACCGGGCTACCGCGTCGCCGTGCTCATGCTGCAGGAGG
AGTTTGTCGACAAGCTGCTGGAGCGGCTCGTGGAGCTGGCGCTCGCGCCG
GGCTACCGCGCCGCCGTGCTCATGCTGCAGGAGGAGTTCGTAGACAAGGA
GGGTTTCGTGGACAAGGCCGCCGCGCGGCCGGGCCACCCCCTGTACGGCG
CGCCGTCGGCCGCCGCGCGCCCGGGCCACCCGCTGTACGGCGCGCCGTCG
GTGCTCGCGCAGACGTTCCTGCGCGTCGAGCCGCTGCGCCTGATTGGGCC
GCAGAATTTTCTGCCGCCGCCCAAGGTGTCCTCGCGCGTCGTGCGCTTCA
CACCGCTGGGCGACTCTGCGGCGGAGGCCAGGCACGTCTTCCAACAAACG
TCATCGTCAGAGCTGCTCGTGACCTATAGGAGGTTCTTGGAGGCTTGCTT
CCGCAGCCGCAACCGCAAGCTGCGCGGCATCCTGCGCGATGGCGTCACCG
CCGTCCCCAGTGCTCCACATCAGCCATCAGATGAATTCATCCGTGTTAAA
GTGGATGAATTGATTTCTTCACAGGGGCTTCTCGAGAAGCGGCCCAACAG
CACCGGTGTAAGAGAGTTCTGCACGTTGTTTGTGCGCCTGCATGAGGCGG
GGCTTCAGCTAAAATAGCAAGTATCCATGGCCG
back to top

protein sequence of jgi.p|Trimin1|350819

>Trimin1|350819|estExt_Genemark1.C_Ctg_730038 ID=Trimin1|350819|estExt_Genemark1.C_Ctg_730038|Name=jgi.p|Trimin1|350819|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=439bp
MRKKRRRSLSDKPPPGVEGEDFVLIPWTPEQLKSIRAKAKAEADASVSPA
VAWQRASKGRNVKLKQSLSQHLLTDQGLLGYVVRQAAVAEGDHVLEIGAG
TGNLTQAILDAHKGDISHLTLVELDRDMARKLADRIDAQGYEFTVMEGND
RTPAQSIRFTRAMKASAAVPGGDGARRDVGVDIERCDVLSARLPPFDVLL
SNAPYAISRKLLERLVELALAPGYRVAVLMLQEEFVDKLLERLVELALAP
GYRAAVLMLQEEFVDKEGFVDKAAARPGHPLYGAPSAAARPGHPLYGAPS
VLAQTFLRVEPLRLIGPQNFLPPPKVSSRVVRFTPLGDSAAEARHVFQQT
SSSELLVTYRRFLEACFRSRNRKLRGILRDGVTAVPSAPHQPSDEFIRVK
VDELISSQGLLEKRPNSTGVREFCTLFVRLHEAGLQLK*
back to top

mRNA from alignment at Contig_73:384483..389072-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12868 ID=mRNA_12868|Name=jgi.p|Trimin1|350819|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4590bp|location=Sequence derived from alignment at Contig_73:384483..389072- (Tribonema minus UTEX_B_3156 )
ATGAGGAAGAAACGAAGACGCAGCCTGAGCGACAAGCCTCCTCCGGGCGT AGAGGGAGAGGACTTCGTGCTGATACCTTGGACACCGGAGCAGCTGAAAA GCATCAGGGCGAAGGCAAAAGCGGAGGCAGACGCTTCAGTGAGTCCAGCT GTCGCCTGGCAGCGCGCCAGCAAGGGCAGGAACGTGAAGCTCAAGCAAAG TCTGAGCCAGCACTTGCTGACGGATCAGGGGCTGCTGGGCTATGTTGTGA GGCAAGCAGCTGTGGCGGAGGGGGATCACGTTTTGGAGATTGGTGCCGGC ACAGGAAATCTCACTCAGGTACGCATCTGGTCAACTACCAGCCGCGATGT GTTTCGTGGCAAAAACGTTAATTTGGAAATCAAAGTACGTTGTCCTTCAA TCTTTGGCAGACCAGGGCAAGCACCTTGGCCATCAAACCAGCTCCACCTG TGCGATGTGCAAGTATTATGTTGGGTAATGTTCACTGAAAACTGATCTTG ACCTGCCATGCTGCAGACCTGGTCCCAAATCTCATGCATGCTCGTTGCTC AGTGAGCGTGCTCATGCTGTCATGCCACAGTTTCCTTGGCACCAGAGGCA CCAGGTACTTATAATGCGCGCGCGCTTGACATATGCGACCCTTCCCCATG CGCGCGGCGGCTGTTGCAGGCCATACTGGACGCGCACAAGGGCGACATCT CTCACCTGACGCTCGTGGAGCTGGACAGGGACATGGCGCGCAAGCTTGCG GACCGCATCGACGCTCAGGGCTACGAGTTTACGGTGATGGAGGGCAACGA CCGCACGCCCGCGCAGAGCATCCGCTTCACGCGTGCGATGAAGGCGAGCG CTGCTGTAGTCACAGAAAGTTTGCATGCTATGGCGTATATACATACAGAC TGTGTGTGTATATGTAAACTCAGCTTTGGAGGACGATCGGCTTGTGAGCC CTGTGTCGGCGAGCATTTATGCATCGCCAGGACTGTGTGTGTATATGTGG CCTTAGCTTCGGAGGACGATCAGCTTGAAGGCGCTGTGGTGGCAAACATG TATGCATCGCCATGTAGCGCCGTAGGCCAGCACATGACCATTGCGGCATT CTCCGCTGTTCACCACGAGTGAGGACAGGCAGCCAGCCAGCTGGCAGCGC TGCTCTGAGCGACGAACGTTGTCATCGCCACATTGCGCGGGCCGGCACGC CTCCCCTCACAACACTGCTCAGCTCCTCATTCGCGCCACAGCATTTAGAA CGGTGCTCACGCACCGATGCCCTTGTGACTACAGAAAGCGCTGCGCCGCG GCGCGTGCGCGCAACTGCAGTCACCCGACGCGGTCGCTCCGACAACGACG ATGATGATCCCGCCCGCTACCATCACTTTGCTACCATCACTTTGAACCCA GTCCGTCACTCCGTTGTGTGCTTCTCTGATCAAGGACATGGCCGCCGTCG CGCTCATCGCTGCAGGTGCCGGGCGGCGACGGCGCGCGCCGCGACGTCGG CGTGGACATTGAGCGCTGCGACGTGCTGTCCGCGCGCCTGCCGCCGTTTG ACGTGCTGCTGTCCAACGCGCCGTACGCCATCAGCCGCAAGCTGCTGGAG CGGCTCGTGGAGCTCGCGCTCGCACCGGGCTACCGCGTCGCCGTGCTCAT GCTGCAGGAGGAGTTTGTCGACAAGGTCGGTGGGCGTAATTTACAATGAT TCTGAATGTTTATGAATGCATCACTTTGAACACTTGTGAGCATAGCCGCA AGCTGCTGGAGCGGCTCGTGGAGCTGGCGCTCGCGCCGGGCTACCGCGCC GCCGTGCTCATGCTGCAGGAGGAGTTCGTAGACAAGGTCGGTGGGCGTCG CCTTCAATCATCATGAATGTTTGTGCATTTTTGTGAACGCTTGTGAGCGT GAACGAGGATGCGCGCCGCCGCGCTCATGCGGCAGGAGGGTTTCGTGGAC AAGGTCGGTGGTAGCTTGTCAGGCTCGTGATCTGAAGGTCGCAGGTTCAA ATCCTGCTCTCGCGTTTGGGAACATAGCGCAATCGGGAGAGCATATGCTT TCGTCACCTTGGATGATCATGAACGTTCATGATCATGAACGTTCATGATC ATGAACGCTAGTGGGCATGAACGGGGACGCATGGACTCCCTGTTGCGGCT GTCAGGTGCTACGGGCAATCCTTGTTGCGGCTTGCACGCCTTACAGATCG GGCGCTTTGCACTATCTCAGCGATGGCCTTCAGTAAGGCGCACACCGACA CCGCATATAGTGCCCAATCATGAAGTCCTTCACTGCGCGGCTCCCGCGCT AATCACTGCTGCACGCAGGCCGCTGCGTGTGCAGGCCACCCCCTGTACGG CGCACCGTCGGTGATCGCACACTGCGTCTTCATCGTTCATGCGCCGTGCA GATAGACATTTTGCCTGACTTGAGCAAGGGACTGACTGTATCACCACCAC GACACCCCATCCATGAGTTACTGTCAAAACACGTTAGGGCCGTGATCTGA TCGCTGCCGCACGCAGGCCGCCGCGCGGCCGGGCCACCCCCTGTACGGCG CGCCGTCGGTGCTCGCACACTGCGTCTTCATCGGTCATGCGCCGCAGACT GGCCATTTTTTTGCCTGACTTGCCATCACCACCACAATACTTCATCAATG AGTTTCTGTGAAAACGTGTGTGACGGCCGTGACTGCCGTTGCAGGCCGCC GCGCGCCCGGGCCACCCGCTGTACGGCGCGCCGTCGGTGCTCGCGCAGAC GTTCCTGCGCGTCGAGCCGCTGCGCCTGATTGGGCCGCAGAATTTTCTGC CGCCGCCCAAGGTGTCCTCGCGCGTCGTGCGCTTCACACCGCTGGGCGAC TCTGCGGTGCGTGCTCGCGTGTACTGTTCGCATGCGCTGTCGGTCTGTGG CGCTTGTGCAGTCTTGCGGTAAAGGTGCCGGTGGCGTTTGTGAATCAGGC ACCAACGCTGCGGTGCGTGCTCTTGCGTACTGCTCGCACGCTGTGGCGCG CTTGCGCAGTCTTGCCGTCAACGTGCCAGTGGTGTGTGACTGAGGCGCTA TGAGTGCCAAGTGTATGTCGCCATTAAAGTTGCTTTGGAAGAGGACTTCC TGTGCACGACGGTACGGCGGTGCGTGCAGAGCTACTTGCTACAAAGTCCA CCGGCACAACATCCCCTGCTGCACGACTGCACTCATGCAATACAGACCAA CAGCACACAAAGTGTGCACTCGTGCAGCAACGAATGTCGTGCCAGCGAAG TTTGTTGCTTGTTCATTGAGGGCGTTGAGTGTAGGTCCCACTGGCACGTT CTACTATTGTACTAGCATCAAAGTGTGATCAGTTCATTGGAGAGCTTATT GCTGGCAGCAGTGTTGTTACACGTGAGCGCTGCGTCACATCGCCCACTTC AAGTGATACGGGCAGACAGTACATGTTTGCTCCTCCCCCTGTTCAGTGAA CATGCTGTGTCCATGGGTGTTTAGTGTCAATTGACAAGAGGGCGTGTGTT CATTTCAGCTGCGCGTCAGCTATCCACGTGCAGCCATCACGAGGTGCACT ATCCTTTCGTGAGTGATGTCTGGCAAGAGCTGTGCATTTAACATGGCATT CCGTCACTGCATACGTAGCATGACTAAACAACCTGCGGTGACTAGGCAGC GCCGCCGCCGCTGCTGGCACGTTCACATTCTGGGTGCTGGTGTGACGTGG CTGACTTGCTCGCGTCGCAAAACACGCTGCGGTGATTAGGCTGCGCCACC GCTGCTGCTGGCAATCATACATTCTGAGTGCTGGTGTGACGCGGCTGACT TGCTCGCATCGCAAAACACCCTGCGGCGATAAGGCGGCCCCGCCGCTACT GCTGGCGATGTCACACTCTGAGTGCCGGTGGGTTGCGGCTGCCTTGCTCA CTCACGCCGCTGTCGTTGGTTCACCGCAGGCGGAGGCCAGGCACGTCTTC CAACAAACGTCATCGTCAGAGCTGCTCGTGACCTATAGGAGGTAAGAAAA GATTTAACACGGTTGAGCTTGTGTGTACCTTCCAACTTGTGCGCCTGGCA GTGCGCACTCATTTGCGATGTCGCTGGCAAATATTGAAGCTGTCCTTGCT TGAAGTTGTTGAAGCTCCCATTGTGTTGCATCATGTGAACATGCATGATT GACAGAACTGCGTAGTTCATAGCCCCCGCTGGTATGATGCCATGCAGAGA CAACACTTCTTGCATCGAACACCGCATTTTTTTTAGCCTTTTCTGGCATG AAGCATCTTCCCGCCTTTTCTGAGGTGGCCCAAGCACCGGCTCAGCTACA CCAGATCGCTCATATTAGGCGGTTTTCTGAATCATGCAGGTTCTTGGAGG CTTGCTTCCGCAGCCGCAACCGCAAGCTGCGCGGCATCCTGCGCGATGGC GTCACCGCCGTCCCCAGTGCTCCACATCAGCCATCAGATGAATTCATCCG TGTTAAAGTGGATGAATTGATTTCTTCACAGGGGCTTCTCGAGAAGCGGC CCAACAGCACCGGTGTAAGAGAGTTCTGCACGTTGTTTGTGCGCCTGCAT GAGGCGGGGCTTCAGCTAAAATAGCAAGTATCCATGGCCG
back to top

Coding sequence (CDS) from alignment at Contig_73:384483..389072-

>mRNA_12868 ID=mRNA_12868|Name=jgi.p|Trimin1|350819|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1317bp|location=Sequence derived from alignment at Contig_73:384483..389072- (Tribonema minus UTEX_B_3156 )
ATGAGGAAGAAACGAAGACGCAGCCTGAGCGACAAGCCTCCTCCGGGCGT
AGAGGGAGAGGACTTCGTGCTGATACCTTGGACACCGGAGCAGCTGAAAA
GCATCAGGGCGAAGGCAAAAGCGGAGGCAGACGCTTCAGTGAGTCCAGCT
GTCGCCTGGCAGCGCGCCAGCAAGGGCAGGAACGTGAAGCTCAAGCAAAG
TCTGAGCCAGCACTTGCTGACGGATCAGGGGCTGCTGGGCTATGTTGTGA
GGCAAGCAGCTGTGGCGGAGGGGGATCACGTTTTGGAGATTGGTGCCGGC
ACAGGAAATCTCACTCAGGCCATACTGGACGCGCACAAGGGCGACATCTC
TCACCTGACGCTCGTGGAGCTGGACAGGGACATGGCGCGCAAGCTTGCGG
ACCGCATCGACGCTCAGGGCTACGAGTTTACGGTGATGGAGGGCAACGAC
CGCACGCCCGCGCAGAGCATCCGCTTCACGCGTGCGATGAAGGCGAGCGC
TGCTGTGCCGGGCGGCGACGGCGCGCGCCGCGACGTCGGCGTGGACATTG
AGCGCTGCGACGTGCTGTCCGCGCGCCTGCCGCCGTTTGACGTGCTGCTG
TCCAACGCGCCGTACGCCATCAGCCGCAAGCTGCTGGAGCGGCTCGTGGA
GCTCGCGCTCGCACCGGGCTACCGCGTCGCCGTGCTCATGCTGCAGGAGG
AGTTTGTCGACAAGCTGCTGGAGCGGCTCGTGGAGCTGGCGCTCGCGCCG
GGCTACCGCGCCGCCGTGCTCATGCTGCAGGAGGAGTTCGTAGACAAGGA
GGGTTTCGTGGACAAGGCCGCCGCGCGGCCGGGCCACCCCCTGTACGGCG
CGCCGTCGGCCGCCGCGCGCCCGGGCCACCCGCTGTACGGCGCGCCGTCG
GTGCTCGCGCAGACGTTCCTGCGCGTCGAGCCGCTGCGCCTGATTGGGCC
GCAGAATTTTCTGCCGCCGCCCAAGGTGTCCTCGCGCGTCGTGCGCTTCA
CACCGCTGGGCGACTCTGCGGCGGAGGCCAGGCACGTCTTCCAACAAACG
TCATCGTCAGAGCTGCTCGTGACCTATAGGAGGTTCTTGGAGGCTTGCTT
CCGCAGCCGCAACCGCAAGCTGCGCGGCATCCTGCGCGATGGCGTCACCG
CCGTCCCCAGTGCTCCACATCAGCCATCAGATGAATTCATCCGTGTTAAA
GTGGATGAATTGATTTCTTCACAGGGGCTTCTCGAGAAGCGGCCCAACAG
CACCGGTGTAAGAGAGTTCTGCACGTTGTTTGTGCGCCTGCATGAGGCGG
GGCTTCAGCTAAAATAG
back to top