Trimin1|350811|estExt_Genemark1.C_Ctg_730024 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350811
Unique NameTrimin1|350811|estExt_Genemark1.C_Ctg_730024
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length245
Homology
BLAST of jgi.p|Trimin1|350811 vs. uniprot
Match: A0A835YU23_9STRA (Meiotic nuclear division protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU23_9STRA)

HSP 1 Score: 394 bits (1011), Expect = 4.910e-137
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
Query:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244
            MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV
Sbjct:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244          
BLAST of jgi.p|Trimin1|350811 vs. uniprot
Match: D8LRU4_ECTSI (MND1 family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU4_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.270e-47
Identity = 99/244 (40.57%), Postives = 135/244 (55.33%), Query Frame = 0
Query:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244
            MV++ LSV+EK++++L I+H+TK + +LKE+EK A + G+  NTVKDVN  LV+DG+VD DKIGASNFFW+FPSK  +T  N + +L++ I     +    KRK  EL   R D +              RR KL RL E   R   L  + E LK                              NDP ELE+V    +  ++  N WTDN W IK++MVK +G++GK+VDR L +K DFD V
Sbjct:    1 MVKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTAANKRKFSELEEGRADTAS-------------RREKLGRLQENGLRLQELEKEYESLKE-----------------------------NDPAELEKVARLTQVCKDGVNRWTDNSWCIKSWMVKTKGMSGKDVDRYLQIKGDFDLV 202          
BLAST of jgi.p|Trimin1|350811 vs. uniprot
Match: A0A7S2XYC3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYC3_9STRA)

HSP 1 Score: 161 bits (407), Expect = 6.480e-46
Identity = 94/242 (38.84%), Postives = 139/242 (57.44%), Query Frame = 0
Query:    3 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244
            RK LS++EK++R+L I+H++ EV NLKE+EK A +AG+V  T+KDVN  L++D +VD+DKIG++NFFW+FPSK  +     I SL++QIE +   L  A+ K  +L  A               D + RR  L +L +ER+R + L    + LK                              NDP+EL R++   E  +E  N WTDN+WA+K++ VKK+G+  K+VDR + L +DFDY+
Sbjct:    5 RKGLSLEEKRQRILGIYHSSGEVYNLKEIEKIASKAGVVLQTIKDVNQSLIDDHLVDADKIGSANFFWSFPSKVYVVKKTKIESLQKQIEDSKRQLNAAQDKVADLENA------------GRQDSNTRREGLAKLDQERKRGSELDERLQCLKE-----------------------------NDPEELLRLKNLQEEIKEHVNRWTDNIWAVKSWCVKKKGMPSKDVDRYMQLPQDFDYI 205          
BLAST of jgi.p|Trimin1|350811 vs. uniprot
Match: H3HEE5_PHYRM (Uncharacterized protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3HEE5_PHYRM)

HSP 1 Score: 160 bits (405), Expect = 1.180e-45
Identity = 93/244 (38.11%), Postives = 140/244 (57.38%), Query Frame = 0
Query:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244
            M RK +S+ EK+ER+L I+H +KEV NLKE+EK   +AG+V  TVKDVN  LV+D +VD DKIG+ N+FW+FPSK   T    ++ L+++ +T    L   K+  E+  G R              + +ER  KL+RL E++ +   LR   + L                               NDP+ LE++  +V  A+E ++ WTDN++ +K+++VKK+G+ GKEVD+ LG+K+DFDYV
Sbjct:    1 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDVLVDCDKIGSGNYFWSFPSKLSQTRRRKLSELEQRHQTAQDKLVKVKQNVEKQKGLRP-------------ESEERVQKLRRLEEQKAKVQVLRTKVQHL-----------------------------AENDPEILEQLERKVRMAKEGSDRWTDNVYTLKSWVVKKRGVEGKEVDKWLGIKDDFDYV 202          
BLAST of jgi.p|Trimin1|350811 vs. uniprot
Match: A0A0W8B6R8_PHYNI (Dephospho-CoA kinase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8B6R8_PHYNI)

HSP 1 Score: 160 bits (404), Expect = 1.550e-42
Identity = 95/253 (37.55%), Postives = 140/253 (55.34%), Query Frame = 0
Query:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSL---------GXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244
            M RK +S+ EK+ER+L I+H +KEV NLKE+EK   +AG+V  TVKDVN  LV+D +VD DKIG+ N+FW+FPSK   +    ++ L+++  T   +L   ++  EE    R D            G        + DER  KL+RL E++ +  ALR   + L                               NDP  LE +  +V  A+E ++ WTDN++ +K+++VKK+G+ GKEVD+ LG+K+DFDYV
Sbjct:  272 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDALVDCDKIGSGNYFWSFPSKLSQSRKRKLSELEQRRHTAQENLAKVQQNIEEQKSLRSDSVRTNISRGNFGGVLMEWIICEQDERVQKLRRLEEQKAKVNALRTKVQHL-----------------------------AENDPAILEELERKVRMAKEGSDRWTDNVYTLKSWVVKKRGVEGKEVDKWLGIKDDFDYV 495          
BLAST of jgi.p|Trimin1|350811 vs. uniprot
Match: A0A7S3XLC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLC7_HETAK)

HSP 1 Score: 151 bits (382), Expect = 1.570e-42
Identity = 94/242 (38.84%), Postives = 127/242 (52.48%), Query Frame = 0
Query:    3 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244
            RK +S +EK+ R+L I+H  KEVLNLKELEK   + G+V  ++K+VN  LV+D +VD+DKIG++NFFW+FPSK        +A L                    LG  R              D  +RRA+LQ+L +E+ REAAL    + LK                              NDP+EL R+  E E  +E AN WTDN+WA+K++ +KK+G+   EVDR L L  DFDYV
Sbjct:    5 RKGVSYEEKRTRILGIYHEKKEVLNLKELEKLGVKQGVVVQSIKEVNQALVDDNLVDTDKIGSANFFWSFPSK--------VAEL--------------------LGAGR-------------HDTPQRRAQLQKLQDEKAREAALDQRLDTLKE-----------------------------NDPRELARIETETEKCKEAANRWTDNIWALKSWCIKKKGMASTEVDRYLQLSSDFDYV 176          
BLAST of jgi.p|Trimin1|350811 vs. uniprot
Match: A0A0P1AFA8_PLAHL (Protein involved in meiotic recombination/predicted coiled-coil protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFA8_PLAHL)

HSP 1 Score: 150 bits (378), Expect = 1.350e-41
Identity = 92/244 (37.70%), Postives = 135/244 (55.33%), Query Frame = 0
Query:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244
            M RK +S+ EK+ER+L I+H +KEV NLKE+EK   +AG+V  TVKDVN  LV+D +VD DKIG+ N+FW+FPSK   +    ++ L++  +     L+  K K EE    R              D DER  KL+RL E + +  +LR   + L                               NDP  LE +  +V  A+E A+ WTDN++ +K+++VKK+G+ GKEV++ L +++DFDYV
Sbjct:    1 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDALVDCDKIGSGNYFWSFPSKLSQSRKRKLSELEQCRQARQEKLDRVKEKIEEQQALRS-------------DSDERIQKLKRLEELKVKVESLRNTMQHL-----------------------------AENDPAILEDLECKVGIAKEGADRWTDNVFTLKSWVVKKRGVEGKEVNKWLEIQDDFDYV 202          
BLAST of jgi.p|Trimin1|350811 vs. uniprot
Match: A0A8K1FKH2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKH2_PYTOL)

HSP 1 Score: 145 bits (366), Expect = 9.060e-40
Identity = 82/242 (33.88%), Postives = 135/242 (55.79%), Query Frame = 0
Query:    3 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244
            +K +S++EK+ER+L I+H +K+V N+KE+EK   +AG+V  T+KDVN  LV+D +VD DKIG+ N+FW+FPSK        ++ L+++ ++T   L   K++ E+    R              D D+R AKLQRLAE +     ++A  + L                               NDP  LE +   ++ A+  A+ WTDN++ +++++ +K+G +  EVD+ LG+K+DFDY+
Sbjct:    5 KKGVSLEEKRERILKIYHESKDVYNIKEIEKLGAKAGVVLQTIKDVNQALVDDALVDFDKIGSGNYFWSFPSKVSQQRKRKLSELEQRKQSTSEQLSKVKQEVEKQKSLRT-------------DSDDRVAKLQRLAELQTHVKDMKAKIQHL-----------------------------ADNDPAILEHLERNMQVAKVGADRWTDNVYTVRSWVAQKRGCSTGEVDKWLGIKDDFDYI 204          
BLAST of jgi.p|Trimin1|350811 vs. uniprot
Match: A0A5D6Y0R0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0R0_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.920e-38
Identity = 83/242 (34.30%), Postives = 130/242 (53.72%), Query Frame = 0
Query:    3 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244
            RK +S++EK+ R+L I+H +K+V NLKE+EK   +AG+V  T+KDVN  LV+DG+VD DKIG+ N+FW+FPSK        +  L+++       L   ++  +E    R              + D+R AKLQRLAE       L+A  + LK                              NDP+ L ++   V+ A+  A+ WTDN++ +++++ +K+G    EVD+ LG+K+DFDY+
Sbjct:    4 RKGVSLEEKRARILHIYHDSKDVFNLKEVEKIGAKAGVVLQTIKDVNQALVDDGLVDCDKIGSGNYFWSFPSKLSQARKRKLGELEQRKAAAQDKLAKVRQSIDEQKSKRT-------------ESDDRAAKLQRLAE-------LQASVKDLKAKVQHLAD----------------------NDPEILAQLERSVQVAKIGADRWTDNVFTMRSWVAQKRGCASSEVDKWLGIKDDFDYI 203          
BLAST of jgi.p|Trimin1|350811 vs. uniprot
Match: K3X901_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X901_GLOUD)

HSP 1 Score: 140 bits (354), Expect = 5.690e-38
Identity = 82/242 (33.88%), Postives = 131/242 (54.13%), Query Frame = 0
Query:    3 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244
            +K +S++EK+ERLL I+H  K+V NLKE+EK   +AG+V  T+KDVN  LV+D +VDSDKIG+ N+FW+FPSK   +    ++ L+++   T   L   +   E     R              + D+R  KLQRLAE +++   L+ +   L                               NDP+ L  +  +V+ A+  A+ WTDN++ +++++ +K+G    EVD+ LG+K+DFDY+
Sbjct:    5 KKGVSLEEKRERLLRIYHDAKDVFNLKEIEKLGAKAGVVLQTIKDVNQALVDDALVDSDKIGSGNYFWSFPSKVSQSRKRKLSELEQRKAATQEKLSKVQLAIETQKTMRT-------------ESDDRVQKLQRLAELQKKVKVLKTNIHHL-----------------------------AENDPEILREMERKVQIAKLGADRWTDNVFTMRSWVAQKRGCASSEVDKWLGIKDDFDYI 204          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350811 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YU23_9STRA4.910e-137100.00Meiotic nuclear division protein 1 n=1 Tax=Tribone... [more]
D8LRU4_ECTSI1.270e-4740.57MND1 family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A7S2XYC3_9STRA6.480e-4638.84Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
H3HEE5_PHYRM1.180e-4538.11Uncharacterized protein n=24 Tax=Phytophthora TaxI... [more]
A0A0W8B6R8_PHYNI1.550e-4237.55Dephospho-CoA kinase domain-containing protein n=2... [more]
A0A7S3XLC7_HETAK1.570e-4238.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0P1AFA8_PLAHL1.350e-4137.70Protein involved in meiotic recombination/predicte... [more]
A0A8K1FKH2_PYTOL9.060e-4033.88Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y0R0_9STRA3.920e-3834.30Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3X901_GLOUD5.690e-3833.88Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 135..187
NoneNo IPR availableCOILSCoilCoilcoord: 84..104
NoneNo IPR availableCOILSCoilCoilcoord: 192..212
IPR040453Mnd1, HTH domainPFAMPF03962Mnd1coord: 15..73
e-value: 5.0E-21
score: 74.7
IPR005647Meiotic nuclear division protein 1PIRSFPIRSF026991MND1coord: 116..244
e-value: 6.5E-16
score: 55.7
coord: 1..165
e-value: 2.5E-33
score: 112.6
IPR040661Leucine zipper with capping helix domainPFAMPF18517LZ3wCHcoord: 192..244
e-value: 2.5E-11
score: 43.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_73contigContig_73:197915..202972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350811mRNA_12854Tribonema minus UTEX_B_3156 mRNAContig_73 197462..202972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350811|estExt_Genemark1.C_Ctg_730024 ID=Trimin1|350811|estExt_Genemark1.C_Ctg_730024|Name=jgi.p|Trimin1|350811|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=245bp
MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNA
ELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLED
AKRKGEELGGARVDPSLGEELRGTRVDCDERRAKLQRLAEEREREAALRA
DAEQLKRESEAALRADAEQLREREAALRADVEQLKENDPKELERVRAEVE
GARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040453Mnd1_HTH
IPR005647Mnd1
IPR040661LZ3wCH