mRNA_12886 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|170521 vs. uniprot
Match: A0A835YLX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLX3_9STRA) HSP 1 Score: 801 bits (2070), Expect = 1.340e-293 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1 Query: 1 MARGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVDRNPLAYTYEPGGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVKATPAWYAKMAALLAVYIPLYLAMLGVDVLGRGAGLGVGARLAAAFAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPDLIHARPFIRKSLLSPLHEYFRWFVDWQHVVAPGFMCVIPGQSLGQTISYARGAAQGHVWRVPARDVRGGIRWYEWCVYALSVGSHLWGMNIFVSYAYLMGINTLYHLTIAPDHDTYESAVLNARHPKPSAPQDWGEAQVRNGHGRSRAKSGIQIHASM 1164 MARGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVDRNPLAYTYEPGGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVKATPAWYAKMAALLAVYIPLYLAMLGVDVLGRGAGLGVGARLAAAFAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPDLIHARPFIRKSLLSPLHEYFRWFVDWQHVVAPGFMCVIPGQSLGQTISYARGAAQGHVWRVPARDVRGGIRWYEWCVYALSVGSHLWGMNIFVSYAYLMGINTLYHLTIAPDHDTYESAVLNARHPKPSAPQDWGEAQVRNGHGRSRAKSGIQIHASM Sbjct: 1 MARGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVDRNPLAYTYEPGGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVKATPAWYAKMAALLAVYIPLYLAMLGVDVLGRGAGLGVGARLAAAFAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPDLIHARPFIRKSLLSPLHEYFRWFVDWQHVVAPGFMCVIPGQSLGQTISYARGAAQGHVWRVPARDVRGGIRWYEWCVYALSVGSHLWGMNIFVSYAYLMGINTLYHLTIAPDHDTYESAVLNARHPKPSAPQDWGEAQVRNGHGRSRAKSGIQIHASM 388
BLAST of jgi.p|Trimin1|170521 vs. uniprot
Match: A0A6H5KKY7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY7_9PHAE) HSP 1 Score: 350 bits (898), Expect = 1.690e-111 Identity = 174/356 (48.88%), Postives = 231/356 (64.89%), Query Frame = 1 Query: 7 RGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVDRNPLAYTYEPGGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVKATPAWYAKMAALLAVYIPLYLAMLGVDVLGRGAGLGVG-----ARLAAAFAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPDLIHARPFIRKSLLSPLHEYFRWFVDWQHVVAPGFMCVIPGQSLGQTISYARGAAQGHVWRVPARDVRGGIRWYEWCVYALSVGSHLWGMNIFVSYAYLMGINTLYHLTIAPDHDTYESAVLNA 1059 +G ED+T +FESYHAL++ AIR L+ +TGK+ DD+ +EAA++ G + P+ Y ++ GGFY VL ARVK++FL H R A P + ++ R+VKA PAWY K +L VY+PL+ MLG +V G G G + R AA AG LLQ SFC LHDASHY L + QE +SR CNAWTLW+H +W++HHVYGHHSFTGDP RDPDL+HARP++RKS+L+P +Y + V WQ AP FM V+PG SLGQT +Y RG +G++W V GG RWYE+ YA VG H+ G +++VS+ Y MGI+ YHL +APDHDT ES+++N+ Sbjct: 120 KGAEDITPVFESYHALAHSAAIRQSLEKFEWTGKLVDDVSEREAALVGGTRKEPVRYRWDEGGFYAVLTARVKSYFLQKHGR--------------AGVDP----RNASVNRFVKAPPAWYLKELLILVVYLPLFACMLGYNVCGTGLGEALSPPPLWVRATAAVLAGGLLQSFSFCTLHDASHYGLLFKRPRVQEVVSRLCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAPAEQYDPFLVKWQRFFAPAFMMVMPGASLGQTQAYLRGLREGNLWHVSITAASGGTRWYEYMTYAAVVGLHVVGGSVWVSFCYFMGISVAYHLCVAPDHDTLESSIVNS 457
BLAST of jgi.p|Trimin1|170521 vs. uniprot
Match: D7G7E3_ECTSI (FA_desaturase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E3_ECTSI) HSP 1 Score: 308 bits (789), Expect = 7.830e-100 Identity = 159/329 (48.33%), Postives = 211/329 (64.13%), Query Frame = 1 Query: 7 RGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVDRNPLAYTYEPGGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVK-ATPAWYAKMAALLAVYIPLYLAMLGVDVLGRGAGLGVG-----ARLAAAFAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPDLIHARPFIRKSLLSPLHEYFRWFVDWQHVVAPGFMCVIPGQSLGQTISYARGAAQGHVWRVPARDVRGGIRWYEWCVYALSVGSHLWGMNIFVSY 975 +G ED+T +FESYHAL++ AIR L+ +TGK+ DD+ +EAA++ G + P+ Y ++ GGFY VL ARVKA+FL H R P+ A ++ R+VK A PAWY K +L VY+PL+ MLG +V G G + R AA AGALLQ SFC LHDASHY L + QEA+SR CNAWTLW+H +W++HHVYGHHSFTGDP RDPDL+HARP++RKS+L+P +Y + V WQ AP FM V+PG SLGQT +Y RG +G++W V GG RWYE+ YA +VG H+ G ++++S+ Sbjct: 2 KGAEDITPVFESYHALAHSAAIRQNLEKFEWTGKLMDDVSEREAALVGGTRKEPVRYRWDEGGFYAVLIARVKAYFLQKHGRA--------GVDPRKA----------SVNRFVKEAPPAWYFKELLILVVYLPLFTCMLGYNVFATGLGEALPPPPLWVRATAAVLAGALLQSFSFCTLHDASHYGLLFKRPRVQEAVSRLCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAPAEQYDPFLVKWQRFFAPAFMMVMPGASLGQTQAYLRGLREGNLWHVSITAASGGTRWYEYVTYAAAVGLHVVGGSVWISF 312
BLAST of jgi.p|Trimin1|170521 vs. uniprot
Match: A0A0V0QTF1_PSEPJ (Cytochrome b5-like heme/steroid binding domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QTF1_PSEPJ) HSP 1 Score: 159 bits (402), Expect = 6.050e-41 Identity = 114/375 (30.40%), Postives = 166/375 (44.27%), Query Frame = 1 Query: 1 MARGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVDRNPLAYTYEPGGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVKATPAWYAKMAALLAVYIP-LYLAMLGVDVLGRGAGLGVGARLAAAFAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPDLIHARPFIRKSLLSPLHEYFRWFVDWQHVVAPGFMCVIPGQSLGQTISYA-RGAAQGHVWRVPARDVRGGIRWYEWCVYALSVGSHLWGMNIFVSYAYLMGINTLYHLTIAPDHDTYESAVLNARHPK--PSAPQDWGEAQVRN 1113 + RG D+T +FESYHA ++L ++ L A G P YT+ G FYDV++ RV+ +F G + VK W+ K++ + +Y+ LY + +F +G LL + C HDASH+AL++R + +R A+ L+ +WM HH + HH++TGD DPD+I+ +PFIRK P +Y ++ +V M ++PGQ +GQ + Y QG +WR+ R YE + V HL+ NIFV+ Y +G N Y L I PDHDT N H PS +DWGE QVRN Sbjct: 45 VTRGHLDITPMFESYHAFADLDKLKQDL-----------------ATYQVGKSEYPQKYTFNKGEFYDVVRERVRKYF----------------------------GTEKNVNHKVKINAFWFTKVSIITILYLASLYFSFF--------TNYSTKLTCLISFISGWLLIAVGMCVYHDASHFALFQRNFEKNDVFTRIVGAFLLFRPELWMTHHSFRHHAYTGDENLDPDIINYQPFIRKVDRVPAKKYMKYTNKILGLVTCITMWLLPGQGVGQALIYEFTWRIQGRIWRMSYPKEILNRRIYERLILIALVFMHLYKFNIFVTICYFIGYNMAYSLAIVPDHDT------NQTHQNFDPSR-KDWGETQVRN 359
BLAST of jgi.p|Trimin1|170521 vs. uniprot
Match: A0A5K0U7T4_9VIRU (Cytochrome b5-like heme/steroid binding domain n=1 Tax=Yasminevirus sp. GU-2018 TaxID=2420051 RepID=A0A5K0U7T4_9VIRU) HSP 1 Score: 128 bits (322), Expect = 1.780e-29 Identity = 101/374 (27.01%), Postives = 166/374 (44.39%), Query Frame = 1 Query: 7 RGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVDRNPLAYTYEPGGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVKATPAWYAKMAALLAVYIPLYLAMLGVDVLGRGAGLGVGARLAAAFAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPDLIHARPFIRKSLLSPLHEYFRWFVDWQHVVAPGFMCVIPGQSLGQTISY-ARGAAQGHVWRVP-ARDVRGGIRWYEWCVYALSVGSHLWGMNIFVSYAYLMGINTLYHLTIAPDHDTYESA---VLNARHPKPSAPQDWGEAQVRN 1113 +GL D T LFESYH++ ++ I+ + + + + + ++ ++ P YT+ GFY V+ RV+ HF + Y W K + +Y+ + L R +A AG ++ F +HDASH+A+ R+ LSR N LW+H +W++HHV HHSFTGD DPD++H RPF++K+ Y +++ + V PG +GQ + Y +G +WR+ + R + YE + ++ S ++G ++ V AY++ +N LY + I PDHDT ++A + + DWGE QVRN Sbjct: 37 KGLIDSTPLFESYHSVCDMDKIKAIMPKYEVSVSTSVPTIFSMSDVISKSNQGP-KYTFNRDGFYSVVTNRVREHF------------------------------NKNSHHY---NSFWLVKSIVQILMYVVAFTTAFWFT------DLNFHVRCISAVVAGLMVVGAGFGVMHDASHFAV-ARSDKINTLLSRTWNGIALWDHQLWLMHHVVRHHSFTGDDNWDPDVLHLRPFVQKTPYDKRSGYISTALNFPRFMTLLVSVVFPGLFVGQCVMYHLMWPLRGRIWRMEFPKYYRRSL--YETLLNLVTCVSFVYGGSLTVFLAYIVPLNILYFVGIFPDHDTQKTADNKIKSTDSTDNGLDIDWGEMQVRN 367
BLAST of jgi.p|Trimin1|170521 vs. uniprot
Match: A0A0G4FKE0_9ALVE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FKE0_9ALVE) HSP 1 Score: 129 bits (323), Expect = 3.190e-29 Identity = 110/327 (33.64%), Postives = 148/327 (45.26%), Query Frame = 1 Query: 157 DRNPLAYTYEP-GGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVKATPAWYAKMAALLAVYIPLYLAMLGVDVLGRGAGLGVGARLAAA---FAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPDLIHARPFIRKSLLSPLHEYFRWFVDWQHVVAPGFMCVIPGQSLGQTISYARGAAQGHVWRVPARDVRGGIRWYEWCVYALSVGSHLWGMNIFV-SYAYLMGINTLYHLTIAPDHDTYESAVLNARHPKPSAPQ----DWGEAQVR 1110 D L + P G Y L+ RV+AHF+ + KA + + + KAT W K++ +Y L+LA R GLG+ L F A + C FC +HDASHYA+ + E LSR CNA W H +W HHVYGHHSFTGD +DPD + RPF RK ++ ++ Q A + V PGQ GQ + Y + + +P DV + +E V L W +V S AY +N LY + IAPDHDT+ES LN + + + DWGE QVR Sbjct: 160 DTAKLREAFSPDSGLYRTLQTRVRAHFI---------------DRAKA--------KGIDVRDSWKATSWWTFKVS----IYACLFLAACVTGFRQRWLGLGLPFPLLVLIGFFQAVFHIAC-GFCVMHDASHYAVSSKPWV-NELLSRLCNASQSWFHHVWARHHVYGHHSFTGDVAKDPDTRYGRPFFRKHPDDAEKKFLAVGLENQPASALIALAVFPGQFFGQGLLYLQALFKHRYIGIPV-DVLNDLFTFE-VVVILLAQLQWWVFQPWVQSLAYWGSLNILYWMCIAPDHDTWESLSLNKKKAEEGGDKEEKMDWGEMQVR 455
BLAST of jgi.p|Trimin1|170521 vs. uniprot
Match: A0A6C0KGR0_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KGR0_9ZZZZ) HSP 1 Score: 113 bits (282), Expect = 4.190e-24 Identity = 100/380 (26.32%), Postives = 159/380 (41.84%), Query Frame = 1 Query: 19 DVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVDRNPLAYTYEPGGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVKATPAWYAKMAALLAVYIPLYLAMLGVDVLGRGAGLGVGARLAAAFAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPDLIHARPFIRKS--LLSPLHEYFRWFVDWQHVVAPGFMCVIPGQSLGQTISY-ARGAAQGHVWRVPARDVRGGIRW--YEWCVYALSVGSHLWGMNIFVSYAYLMGINTLYHLTIAPDHDTYESAVLNARHPKPSAP----------QDWGEAQVRN 1113 D TALFESYHA S++ I+ +K + T + ++++P GFY K RV F T + +KA WY + + ++I +L G+ + + +G L I + LHD SHY + + LSR LWNH +W HH HH +TGD +DPD+I++RPF+RKS + E+ + + ++ V+ F + PG +LGQTI Y +W++ GG+ W +++ + V L + Y +L+G+N Y + APDHD Y + + H K + +DWGE QV++ Sbjct: 32 DCTALFESYHAFSDMKKIKMTMKKYEKRDSHTKN-----------------EFSFKPDGFYYTCKKRVNKLF--------------------------------TNKKSIKANIEWYKTVLCSIFLFIMFQFFVLFFQT-------GI-IKCIMSIGSGITLVSIGYNILHDGSHYGISQYV-FINNILSRIIQGMCLWNHTLWSYHHCIRHHQYTGDIEKDPDMINSRPFLRKSKQIRPRKSEFTKILLSFKTVL---FNTIYPGTALGQTIMYHVYWINYRKLWKMDLPKHFGGL-WDIFQYIISFCFVIFELCYGGLLYFYLHLVGMNIGYFIGSAPDHDMYPNHLQIEEHNKEQSXXXXXXXQYIIKDWGEIQVKH 349
BLAST of jgi.p|Trimin1|170521 vs. uniprot
Match: L8H5B9_ACACA (Fatty acid desaturase subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5B9_ACACA) HSP 1 Score: 112 bits (279), Expect = 1.480e-23 Identity = 109/385 (28.31%), Postives = 156/385 (40.52%), Query Frame = 1 Query: 1 MARGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVDRNPLAYTYEPGGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVKATPAWYAKMAALLAVYIPL--YLAMLGVDVLGRGAGLGVGARLAAAFAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPDLIHARPFIRKSLLSPLHEYF--RWFVDWQHVVAPGFMCVIPGQSLGQTISYARGAAQGHVWRVPARDVRGGIRWYEWCVYALSVGSHL--------WGMNIFVSYAYLMGINTLYHLTIAPDHDTYESAVLNARHPKPSAP----QDWGEAQV 1107 + RG D T +FES HALS + + A L KV + E A V+ + ++P GFY VL RV+ HF T Y KAT A++ K+ A ++ L Y +G L A AG ++ I F +HD SHY + + L + W LW+H +W+ HH YGHHS+TG RDPDL++ + F RK SP +W+V + + +P Q +GQ++ Y R V+ VP + +Y S+ HL + + Y G Y L I P+HDTYE+ H S P +DWGE Q+ Sbjct: 55 LGRG-RDCTEMFESVHALS-----KRNVHALLAKYKV----ETPEGAPPPPVE----LFAWQPDGFYSVLSQRVRKHF------------------------------EQTDGNY-KATTAYWFKVTAFFVSWLALISYAYSIG--------------SLYAGLLAGFVMNMIGFTVMHDGSHYGISKNP-LVNRVLHTLWSDWNLWSHFLWLRHHTYGHHSYTGVYRRDPDLVNGQVFFRKHSESPFQAQHTQQWWVTYV------LLWFLPNQHVGQSLLYLRAWIVKTVFGVPLERISAIDLLASTAIYVPSLYFHLVLPFQLLPTSAALTMMALYWSGQGLGYALNIIPNHDTYET------HSLVSVPSNGLRDWGEQQL 367
BLAST of jgi.p|Trimin1|170521 vs. uniprot
Match: A0A6C0KM19_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KM19_9ZZZZ) HSP 1 Score: 79.0 bits (193), Expect = 1.890e-12 Identity = 84/283 (29.68%), Postives = 121/283 (42.76%), Query Frame = 1 Query: 7 RGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVDRNPLAYTYEPGGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVKATPAWYAKMAALLAVYIPLYLAMLGVDVLGRGAGLGVGARLAAAFAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPD--LIHARPFIRKSLLSPLHEYFRWFVDWQHVVAPGFMCVIPGQSLGQTISYARGA 849 +GLED TALFESYHA S+L +I+ L K L A + ++ Y + +Y +++ ++K F P A+ VKA P+WY ++ + Y+ L M+ + A L + AF + + + F LHD+SHYA+ A S +WT+WNH++W LHHV HHSFTGD +DPD L I S LSP QH++ PGQ Q+ YA+ A Sbjct: 29 KGLEDCTALFESYHAFSDLESIKQSLD------KYEKPLVADDDTVIVNT------YNTDFTTYYKLIE-KIKEVF------------------PDRAS--------------VKAPPSWYLFVSVIGCAYMYLLYHMI---MNTHHAFL----QCILAFISSTMEVSLLFNILHDSSHYAI-TTDYKVNTAFSIISQSWTIWNHSIWYLHHVILHHSFTGDE-QDPDKYLYEYAHMIDISHLSP---------STQHLINTIIFAFFPGQHTLQSFLYAKRA 248
BLAST of jgi.p|Trimin1|170521 vs. uniprot
Match: A0A6C0D075_9ZZZZ (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0D075_9ZZZZ) HSP 1 Score: 71.2 bits (173), Expect = 6.910e-10 Identity = 92/386 (23.83%), Postives = 152/386 (39.38%), Query Frame = 1 Query: 7 RGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVDRNPLAYTYEPGGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVKATPAWYAKMAALLAVYIPLYLAMLGVDVLGRGAGLGVGARLAAAFAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPDLIHARPFIRKSLLSPLHEYFRWFVDWQHVVAPGFMCVIPGQSLGQTISYARGAAQGHVWR---------------VPARDVRGGIRWYE-WCVYALSVGSHLWG-MNIFVSYAYLMGINTLYHLTIAPDHDTYESAVLNARHPKPSAPQDWGEAQVRN 1113 R + D TALFESYHA S+ IR L+ + +T+ + Y ++ +++++ R+K L + + P +K + WY ++ L Y+ + +L ++ G L + + G L I F +HD+SHYA + + A S N+W LWNH +W HH++ HHSFTG+ DPD ++ + L W V++ F V PGQ + Q I Y ++ VP RG +Y+ W + +S+ L + I Y + +N LY+ + +HD Y + L + P DW + Q+ N Sbjct: 29 RNMGDCTALFESYHAFSDFPQIRQSLEKYKIQNHLTEGKKD---------------YCHDFTTYHELVD-RIK---------------LVFPDRPS-----------------IKPSSFWYTLVSGLGIAYVFILYHLLSYELYGFWTTLYLSGVM------GLLESTILFNIVHDSSHYAFFLDSKKNNVA-STLSNSWILWNHTVWFFHHIFYHHSFTGNFI-DPD---------HNIFNNLRNVPSWMVNF-------FYMVFPGQYVTQIIWYGVSVFTHDLYTFFSFNDNRQVNGEPIVPLPS-RGFSYFYDPWSLSIMSIKIVLLSRIPIVPLLFYFIVVNVLYYGNVFGNHDLYST--LENFYDGP----DWAKRQICN 335 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170521 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12886 ID=mRNA_12886|Name=jgi.p|Trimin1|170521|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1167bp|location=Sequence derived from alignment at Contig_73:594523..598468+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCGCGAGGGCTGGAGGACGTCACGGCATTGTTTGAGAGCTACCATGCback to top protein sequence of jgi.p|Trimin1|170521 >Trimin1|170521|e_gw1.73.93.1 ID=Trimin1|170521|e_gw1.73.93.1|Name=jgi.p|Trimin1|170521|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=389bp MARGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRback to top mRNA from alignment at Contig_73:594523..598468+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12886 ID=mRNA_12886|Name=jgi.p|Trimin1|170521|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3946bp|location=Sequence derived from alignment at Contig_73:594523..598468+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_73:594523..598468+ >mRNA_12886 ID=mRNA_12886|Name=jgi.p|Trimin1|170521|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1167bp|location=Sequence derived from alignment at Contig_73:594523..598468+ (Tribonema minus UTEX_B_3156 )back to top |