Trimin1|350788|estExt_Genemark1.C_Ctg_720024 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350788
Unique NameTrimin1|350788|estExt_Genemark1.C_Ctg_720024
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length584
Homology
BLAST of jgi.p|Trimin1|350788 vs. uniprot
Match: A0A835YL63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL63_9STRA)

HSP 1 Score: 1085 bits (2805), Expect = 0.000e+0
Identity = 583/583 (100.00%), Postives = 583/583 (100.00%), Query Frame = 0
Query:    1 MRNYKKETELRSSKAKLRDELEGKRDVEETPERRKEALKEGMATLDKEEALEAQRLSDALPRLLKDPEDDDRGDGLGHHEKILVELCELGVFCAVVTDDFDEAKAATTDGHTAEVREKETIDHHDGALSSSWVFIPFMQESYGRLGTRACRFVEDLAMPQRCAQGATAYWIQALNKDRSSSDYPTQEVYTRITTAACTVENTKDAVWMFDAEADAPFIFPVLAARYNPLPAWIAIAHQGLPSMDSPLNDVGAVSSGLRDSAFLIGDTIDAAVVPEHNPFGDADVYLENKGKCPAPASTGSWVDEFNVVSPFPYVVTTTDVFVPWPTVTNTLQASVRLLSGVAACPKLMAAMQREEQAXXXXXMIAAAEAAEAAKAHXXXXXXXXXXAVVNQPEAPAGAVLSIEDVSHEMGFTQAQLAAGLQNIALQRTEEEVDEQQRKLEACQAEHLRLVEEIKKLEPEVQRKRGIMAAFKGELAGNAAAYSEIQAQLKRSRRTLWRACRAHDFTYVYDYDTETAILTPVEEGEDAYTRKERIRAGDMSYDGDAVVERQQAAQDAADAEFEARRFEAENAGESAEEAEQNGDY 583
            MRNYKKETELRSSKAKLRDELEGKRDVEETPERRKEALKEGMATLDKEEALEAQRLSDALPRLLKDPEDDDRGDGLGHHEKILVELCELGVFCAVVTDDFDEAKAATTDGHTAEVREKETIDHHDGALSSSWVFIPFMQESYGRLGTRACRFVEDLAMPQRCAQGATAYWIQALNKDRSSSDYPTQEVYTRITTAACTVENTKDAVWMFDAEADAPFIFPVLAARYNPLPAWIAIAHQGLPSMDSPLNDVGAVSSGLRDSAFLIGDTIDAAVVPEHNPFGDADVYLENKGKCPAPASTGSWVDEFNVVSPFPYVVTTTDVFVPWPTVTNTLQASVRLLSGVAACPKLMAAMQREEQAXXXXXMIAAAEAAEAAKAHXXXXXXXXXXAVVNQPEAPAGAVLSIEDVSHEMGFTQAQLAAGLQNIALQRTEEEVDEQQRKLEACQAEHLRLVEEIKKLEPEVQRKRGIMAAFKGELAGNAAAYSEIQAQLKRSRRTLWRACRAHDFTYVYDYDTETAILTPVEEGEDAYTRKERIRAGDMSYDGDAVVERQQAAQDAADAEFEARRFEAENAGESAEEAEQNGDY
Sbjct:    1 MRNYKKETELRSSKAKLRDELEGKRDVEETPERRKEALKEGMATLDKEEALEAQRLSDALPRLLKDPEDDDRGDGLGHHEKILVELCELGVFCAVVTDDFDEAKAATTDGHTAEVREKETIDHHDGALSSSWVFIPFMQESYGRLGTRACRFVEDLAMPQRCAQGATAYWIQALNKDRSSSDYPTQEVYTRITTAACTVENTKDAVWMFDAEADAPFIFPVLAARYNPLPAWIAIAHQGLPSMDSPLNDVGAVSSGLRDSAFLIGDTIDAAVVPEHNPFGDADVYLENKGKCPAPASTGSWVDEFNVVSPFPYVVTTTDVFVPWPTVTNTLQASVRLLSGVAACPKLMAAMQREEQAXXXXXMIAAAEAAEAAKAHXXXXXXXXXXAVVNQPEAPAGAVLSIEDVSHEMGFTQAQLAAGLQNIALQRTEEEVDEQQRKLEACQAEHLRLVEEIKKLEPEVQRKRGIMAAFKGELAGNAAAYSEIQAQLKRSRRTLWRACRAHDFTYVYDYDTETAILTPVEEGEDAYTRKERIRAGDMSYDGDAVVERQQAAQDAADAEFEARRFEAENAGESAEEAEQNGDY 583          
BLAST of jgi.p|Trimin1|350788 vs. uniprot
Match: A0A835ZIB2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIB2_9STRA)

HSP 1 Score: 349 bits (895), Expect = 4.000e-112
Identity = 221/396 (55.81%), Postives = 248/396 (62.63%), Query Frame = 0
Query:  233 IAIAHQGLPSM-----DSPLNDVGAVSSGLRDSAFLIGDTIDAAVVPEHNPFG---------------------------------------DADVYLENKGKCPAPASTGSWVDEFNVVSPFPYVVTTTDVFVPWPTVTNTLQASVRLLSGVAACPKLMAAMQREEQAXXXXXMIAAAEAAEAAKAHXXXXXXXXXXAVVNQPEAPAGAVLSIEDVSHEMGFTQAQLAAGLQNIALQRTEEEVDEQQRKLEACQAEHLRLVEEIKKLEPEVQRKRGIMAAFKGELAGNAAAYSEIQAQLKRSRRTLWRACRAHDFTYVYDYDTETAILTPVEEGEDAYTRKERIRAGDMSYDGDAV-VERQQAAQDAADAEFEARRFEAENAGESAEEAEQNGDY 583
            +A    GL SM     +SPLNDV AVSSGLR+S FLIGD +DAAVVPE N +G                                       DADVYL+N GK PAP  T                                    VR L+GVAA PKLM AMQREEQA     MI AAEA                        A AG+VLSIEDVSHE+GFTQA+LAAGLQNIALQR +E VDEQ+RKLEA Q+EHLRL+ +IK+LEPEV R+RGIMA  K ELA N AAY+EIQAQLK SRRTLWRACRAHDFT+ YDYDTETAILTPV EGEDAYTR++RI AG++S D DA+ VERQQAA++A DAEFEARR +AEN GESAEEAEQNGDY
Sbjct:   51 LASGESGLSSMSPYCMNSPLNDVAAVSSGLRNSVFLIGDIVDAAVVPEQNSYGIPCYILYIETRTPANSNNIKKYLTNLELPKSPHHRFVIEDADVYLDNNGKRPAPIYT------------------------------------VRALNGVAASPKLMDAMQREEQAHQQLFMIEAAEAVG--------------------DRASAGSVLSIEDVSHELGFTQAELAAGLQNIALQRAQEGVDEQRRKLEAYQSEHLRLINQIKELEPEVHRQRGIMAGLKAELASNVAAYNEIQAQLKTSRRTLWRACRAHDFTHEYDYDTETAILTPVVEGEDAYTRQQRIHAGNLSLDVDAIIVERQQAAREAIDAEFEARRIQAENVGESAEEAEQNGDY 390          
BLAST of jgi.p|Trimin1|350788 vs. uniprot
Match: A0A835ZG51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG51_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.020e-76
Identity = 201/467 (43.04%), Postives = 233/467 (49.89%), Query Frame = 0
Query:  167 TAYWIQALNKDRSSSDYPTQEVYTRITTAACTVENTKDAVWMFDAEA---DAPFIF--------------PVLAARYNPLPAWIAIAH-------------------QGLP-----------------------------------------------------------------------SMDSPLNDVGAVSSGLRDSAFLIGDTIDAAVVPEHN------PFGDADVYLENKGKCPAPASTGS---WVDEFNVVSPFPYVVTTTDVFV--------PWPTVTNTLQASVRLLSGVAACPKLMAAMQREEQAXXXXXMIAAAEAAEAAKAHXXXXXXXXXXAVVNQPEAPAGAVLSIEDVSHEMGFTQAQLAAGLQNIALQRTEEEVDEQQRKLEACQAEHLRLVEEIKKLEPEVQRKRGIMAAFKGELAGNAAAYSEIQAQLKRSRRTLWRACRAHDFTYVYD 509
            TAYW QAL+KD S   +P  EVYTRITTAACTVENTKDAVW +DA+A    APFIF               VL   Y+  P   AI                     QG P                                                                        MDSPLNDVGAVSSGL  SAFL+GDT+DAAVVPE N      P+    +Y+E K    APA++ +    +    +     +     D +V        P PT+T              A P+LMAAM REEQA     MI AAEA  A                    +A AG VLSIEDVSHE+ FT+A+L AGLQNIA+QR ++ V EQ+RKLEA QAEHLRLV+EIK+LEPEVQRKRG+MA +K ELAG AAAY+EIQAQLK SRRTLWRACRAHDF Y YD
Sbjct:    9 TAYWFQALHKDHS---FPAMEVYTRITTAACTVENTKDAVWRWDAKAIPRAAPFIFVRLEKQQAIAAHLAKVLQQFYSSWPDATAIIFTPAELLAPMKFDAMGRAPAQGAPLVVAAARAGGQVKNSAGMDSHRASGSAKGHWNGYVLLIKFLLHRELSDEHDQRCERALASGKPRLSSKFPYCMDSPLNDVGAVSSGLHASAFLLGDTVDAAVVPEENKSHVGVPY--YILYIETK----APANSNNIKKCLTNLQLPESPHHRAVIEDAYVFLENKGQRPAPTIT--------------ARPELMAAMLREEQAHQQLLMIEAAEAVVA--------------------QASAGTVLSIEDVSHELAFTRAELTAGLQNIAVQRAQDGVGEQKRKLEAYQAEHLRLVDEIKELEPEVQRKRGLMAGYKAELAGKAAAYNEIQAQLKVSRRTLWRACRAHDFKYHYD 432          
BLAST of jgi.p|Trimin1|350788 vs. uniprot
Match: A0A836CGX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGX0_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.310e-13
Identity = 62/131 (47.33%), Postives = 77/131 (58.78%), Query Frame = 0
Query:    2 RNYKKETELRSSKAKLRDELEGKRDVEETPER----------------RKEALKEGMATLDKEEALEAQRLSDALPRLLKDPEDDDRGDGLGHHEKILVELCELGVFCAVVTDDFDEAKAATTDGHTAEVR 116
            R  ++ETELRSS AKLRDE+EG RDV++T ER                ++ + +EG    D E   E  RLSD LPRLL+  + +D GDG G   KIL+EL + GVFC VVTDDFDEA A     H  + R
Sbjct:  493 RRRQEETELRSSNAKLRDEIEGLRDVKDTLERXXXXXXXXXXXXXXXXQRISFEEG----DLERRRE--RLSDMLPRLLQGLDGEDIGDGPGRFGKILIELRQHGVFCCVVTDDFDEADAVQEAAHKYKTR 617          
BLAST of jgi.p|Trimin1|350788 vs. uniprot
Match: A0A835YP37_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP37_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.960e-10
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0
Query:  108 TDGHTAEVREKETIDHHDGALSSSWVFIPFMQESYGRLGTRACRFVEDLAMPQRCAQGATAYWIQA 173
            TDGHTA V E+E I +HDGAL SSW F+PF+QES+GR G +  +F++ LA       G     I++
Sbjct:    6 TDGHTASVGEQEKIKYHDGALGSSWAFVPFVQESFGRFGVKTQQFIKKLAQHSAMCSGGNGAQIKS 71          
BLAST of jgi.p|Trimin1|350788 vs. uniprot
Match: A0A835YP77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP77_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.630e-9
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0
Query:  103 AKAATTDGHTAEVREKETIDHHDGALSSSWVFIPFMQES 141
            AK   +DGHTAEV EKE  DHHDGALSSSWVF+PF+QES
Sbjct:   24 AKRINSDGHTAEVGEKEKEDHHDGALSSSWVFVPFVQES 62          
BLAST of jgi.p|Trimin1|350788 vs. uniprot
Match: A0A836CCC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC9_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.470e-9
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0
Query:  102 EAKAATTDGHTAEVREKETIDHHDGALSSSWVFIPFMQESYGRLGTRACRFVEDLAMPQRCAQG 165
            +  A+ TDG+ A V E   + HH G L+SSW F+PF+QESYGRLG +   FV++LAM      G
Sbjct:   94 KTNASNTDGYAAGVGEDAKVKHHTGTLTSSWAFVPFVQESYGRLGKQTRLFVKELAMHSALCSG 157          
BLAST of jgi.p|Trimin1|350788 vs. uniprot
Match: A0A835YMI5_9STRA (Uncharacterized protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMI5_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.310e-9
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0
Query:  102 EAKAATTDGHTAEVREKETIDHHDGALSSSWVFIPFMQESYGRLGTRACRFVEDLAMPQRCAQG 165
            +  A+ TDG+ A V E   + HH G L+SSW F+PF+QESYGRLG +   FV++LAM      G
Sbjct:  132 KTNASNTDGYAAGVGEDAKVKHHTGTLTSSWAFVPFVQESYGRLGKQTSLFVKELAMHSALCSG 195          
BLAST of jgi.p|Trimin1|350788 vs. uniprot
Match: A0A835ZF31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF31_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.490e-8
Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 0
Query:  102 EAKAATTDGHTAEVREKETIDHHDGALSSSWVFIPFMQESYGRLGTRACRFVEDLAM 158
            +  A+ TDG+ A V E   + HH G L+SSW F+PF+QESYGRLG +   FV++LAM
Sbjct:  182 KTNASNTDGYAAGVGEDAKVKHHTGTLTSSWAFVPFVQESYGRLGKQTRLFVKELAM 238          
BLAST of jgi.p|Trimin1|350788 vs. uniprot
Match: A0A836CGZ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ3_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.000e-8
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0
Query:  102 EAKAATTDGHTAEVREKETIDHHDGALSSSWVFIPFMQESYGRLGTRACRFVEDLAMPQRCAQG 165
            +  A+ TDG+ A V E   + HH G L+SSW F+PF+QE+YGRLG +   FV++LAM      G
Sbjct:  299 KTNASNTDGYAAGVGEDAKVKHHTGTLTSSWAFVPFVQETYGRLGKQTSLFVKELAMHSALCSG 362          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350788 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835YL63_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIB2_9STRA4.000e-11255.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZG51_9STRA1.020e-7643.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGX0_9STRA2.310e-1347.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YP37_9STRA2.960e-1048.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YP77_9STRA1.630e-976.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCC9_9STRA2.470e-948.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMI5_9STRA3.310e-948.44Uncharacterized protein n=5 Tax=Tribonema minus Ta... [more]
A0A835ZF31_9STRA1.490e-852.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGZ3_9STRA3.000e-846.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 425..452
NoneNo IPR availableCOILSCoilCoilcoord: 548..568
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..583
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 557..571

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_72contigContig_72:286460..293337 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350788mRNA_13439Tribonema minus UTEX_B_3156 mRNAContig_72 286354..293337 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350788|estExt_Genemark1.C_Ctg_720024 ID=Trimin1|350788|estExt_Genemark1.C_Ctg_720024|Name=jgi.p|Trimin1|350788|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=584bp
MRNYKKETELRSSKAKLRDELEGKRDVEETPERRKEALKEGMATLDKEEA
LEAQRLSDALPRLLKDPEDDDRGDGLGHHEKILVELCELGVFCAVVTDDF
DEAKAATTDGHTAEVREKETIDHHDGALSSSWVFIPFMQESYGRLGTRAC
RFVEDLAMPQRCAQGATAYWIQALNKDRSSSDYPTQEVYTRITTAACTVE
NTKDAVWMFDAEADAPFIFPVLAARYNPLPAWIAIAHQGLPSMDSPLNDV
GAVSSGLRDSAFLIGDTIDAAVVPEHNPFGDADVYLENKGKCPAPASTGS
WVDEFNVVSPFPYVVTTTDVFVPWPTVTNTLQASVRLLSGVAACPKLMAA
MQREEQAQQQLLMIAAAEAAEAAKAHQQLLMIEAAEAVVNQPEAPAGAVL
SIEDVSHEMGFTQAQLAAGLQNIALQRTEEEVDEQQRKLEACQAEHLRLV
EEIKKLEPEVQRKRGIMAAFKGELAGNAAAYSEIQAQLKRSRRTLWRACR
AHDFTYVYDYDTETAILTPVEEGEDAYTRKERIRAGDMSYDGDAVVERQQ
AAQDAADAEFEARRFEAENAGESAEEAEQNGDY*
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