Trimin1|350782|estExt_Genemark1.C_Ctg_720015 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350782
Unique NameTrimin1|350782|estExt_Genemark1.C_Ctg_720015
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length176
Homology
BLAST of jgi.p|Trimin1|350782 vs. uniprot
Match: A0A835YV54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV54_9STRA)

HSP 1 Score: 337 bits (865), Expect = 4.740e-117
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query:    1 MRTGLGLALLTVAANVCPACSFQAWTRSGVGRAAVASSAKCRTRALLMSEAPASEAPAVPAAPASLDVKIAGMQETAGGFISHLEVHIFRTVTTHKIIIAKANLQDLSERTGKPVDVEQVLKHIVEFMVDKKMPLDNTEGMIDAGVFPVNYFTAGQLAQFHPELWDKLAETLASD 175
            MRTGLGLALLTVAANVCPACSFQAWTRSGVGRAAVASSAKCRTRALLMSEAPASEAPAVPAAPASLDVKIAGMQETAGGFISHLEVHIFRTVTTHKIIIAKANLQDLSERTGKPVDVEQVLKHIVEFMVDKKMPLDNTEGMIDAGVFPVNYFTAGQLAQFHPELWDKLAETLASD
Sbjct:    1 MRTGLGLALLTVAANVCPACSFQAWTRSGVGRAAVASSAKCRTRALLMSEAPASEAPAVPAAPASLDVKIAGMQETAGGFISHLEVHIFRTVTTHKIIIAKANLQDLSERTGKPVDVEQVLKHIVEFMVDKKMPLDNTEGMIDAGVFPVNYFTAGQLAQFHPELWDKLAETLASD 175          
BLAST of jgi.p|Trimin1|350782 vs. uniprot
Match: D7FYU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYU6_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 2.900e-23
Identity = 49/114 (42.98%), Postives = 76/114 (66.67%), Query Frame = 0
Query:   57 PAVPAAPASL--DVKIAGMQETAGGFISHLEVHIFRTVTTHKIIIAKANLQDLSERTGKPVDVEQVLKHIVEFMVDKKMPLDNTEGMIDAGVFPVNYFTAGQLAQFHPELWDKL 168
            PA  AAP      + +  +QET  G+IS ++V  F+  T H+I+++K  L   SE  GK V+V  ++ +++++M+DK + LDNTEGMI+A VFPVNYFT  QL+ FH ++ +K+
Sbjct:    8 PAAAAAPIKKKRSITVQFVQETPAGYISVVDVKNFKATTNHRIVMSKEQLAQYSELAGKKVEVGDLMGYVMKYMLDKGIKLDNTEGMIEASVFPVNYFTLKQLSYFHDDVEEKI 121          
BLAST of jgi.p|Trimin1|350782 vs. uniprot
Match: W7TI06_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TI06_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 7.730e-17
Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 0
Query:   35 VASSAKCRTRALLMSEAPASEAPAVPAAPAS--LDVKIAGMQETAGGFISHLEVHIFRTVTTHKIIIAKANLQDLSERTGKPVD---VEQVLKHIVEFMVDKKMPLDNTEGMIDAGVFPVNYFTAGQLAQFHPELWDKLAETL 172
            V  SA CR      +  PA+EA    AAP     ++ I  + E+ GG+++ +EV  F+ VT H +I +K   Q+     GK  D   +E   + + +F++ K +PL  TEGMIDAGVFP+NYF+  QLA F  +  + +A  L
Sbjct:   33 VRKSADCRVWMSSAAVPPATEASPAAAAPTRPRREINILQVIESNGGYMAKVEVKNFKDVTEHTVITSKELYQETCALAGKTPDELPIEDYYRGVFKFIIGKGLPLTRTEGMIDAGVFPINYFSVSQLAIFLDDTVEGVAAEL 175          
BLAST of jgi.p|Trimin1|350782 vs. uniprot
Match: A0A7S1K9Y0_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K9Y0_9ALVE)

HSP 1 Score: 80.5 bits (197), Expect = 3.730e-15
Identity = 40/104 (38.46%), Postives = 65/104 (62.50%), Query Frame = 0
Query:   68 VKIAGMQETAGGFISHLEVHIFRTVTT-HKIIIAKANLQDLSERTGKPVDVEQVLKHIVEFMVDKKMPLDNTEGMIDAGVFPVNYFTAGQLAQFHPELWDKLAE 170
            +K+  + E  GG++S + +      TT H + +      D+  +  + VD E ++K+I +FM+D+KM +DNTEGMID+ VFPVNYF+A Q+   H +  D+LA+
Sbjct:  146 IKVEYVDEWNGGWMSDVVIDYGGGKTTKHTVTVGFFLYNDVVTKANREVDPETLVKYIFKFMLDRKMSMDNTEGMIDSSVFPVNYFSAAQVEYVHEDFRDRLAD 249          
BLAST of jgi.p|Trimin1|350782 vs. uniprot
Match: A0A0G4H3W5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H3W5_VITBC)

HSP 1 Score: 80.5 bits (197), Expect = 1.860e-14
Identity = 40/104 (38.46%), Postives = 65/104 (62.50%), Query Frame = 0
Query:   68 VKIAGMQETAGGFISHLEVHIFRTVTT-HKIIIAKANLQDLSERTGKPVDVEQVLKHIVEFMVDKKMPLDNTEGMIDAGVFPVNYFTAGQLAQFHPELWDKLAE 170
            +K+  + E  GG++S + +      TT H + +      D+  +  + VD E ++K+I +FM+D+KM +DNTEGMID+ VFPVNYF+A Q+   H +  D+LA+
Sbjct:  465 IKVEYVDEWNGGWMSDVVIDYGGGKTTKHTVTVGFFLYNDVVTKANREVDPETLVKYIFKFMLDRKMSMDNTEGMIDSSVFPVNYFSAAQVEYVHEDFRDRLAD 568          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350782 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YV54_9STRA4.740e-117100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FYU6_ECTSI2.900e-2342.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TI06_9STRA7.730e-1737.06Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1K9Y0_9ALVE3.730e-1538.46Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
A0A0G4H3W5_VITBC1.860e-1438.46Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_72contigContig_72:202005..205630 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350782mRNA_13425Tribonema minus UTEX_B_3156 mRNAContig_72 201993..205884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350782|estExt_Genemark1.C_Ctg_720015 ID=Trimin1|350782|estExt_Genemark1.C_Ctg_720015|Name=jgi.p|Trimin1|350782|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=176bp
MRTGLGLALLTVAANVCPACSFQAWTRSGVGRAAVASSAKCRTRALLMSE
APASEAPAVPAAPASLDVKIAGMQETAGGFISHLEVHIFRTVTTHKIIIA
KANLQDLSERTGKPVDVEQVLKHIVEFMVDKKMPLDNTEGMIDAGVFPVN
YFTAGQLAQFHPELWDKLAETLASD*
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