mRNA_12364 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: A0A835YKU2_9STRA (Methyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKU2_9STRA) HSP 1 Score: 1050 bits (2716), Expect = 0.000e+0 Identity = 567/567 (100.00%), Postives = 567/567 (100.00%), Query Frame = 1
Query: 1 MDNIAGQGEVEGGIEVEDGSSSGDSSGXXXXXXXXXXXXXXXXXXXXXXXAAQHGIENPYRPAAARRRGLPARALFGLARTLWRCYVCTALVVLTLLVAGAVALVASALSMWAAHQEFITKGGSGPQPLSPFLESAATAMEVMTGGPYNYTLAQQQRASAGAGAAGVKYEDSHDAAAXXXADAANSTDPQCARLFMESTRRWTQRVCDRRADTRAAYANIRQPTWDPWEPEFDCEVRDRVGLDAFAGIKPRVMCSAALLAKASSCLAYSFGDSGIDGFLGALLRLAPNCEASLAAAAAAAPSKLPSLSNYDVHVFDPAERAKWLHAKTAKSAGYSFHLLGLGTQAQQEQGAAFRGGALLTLQRIMADLGHAGRAIHVLKLDCDGCALGALQEQVFAPMARAELRVHNVQAMEMRAERVMGLRMQPMSVLDNQPNPMARMGAFFEGADAAGLRTYHKDGNHLGCTGILCADYAFVSAEWARMAFHDSHCPATVASPEELGPLRARLPCRYRCNSYGRASAAGSSALVRQADGLHGIVQLQQLPAALTRAPGVRDIGHMRKFPCVRVDR 1701
MDNIAGQGEVEGGIEVEDGSSSGDSSGXXXXXXXXXXXXXXXXXXXXXXXAAQHGIENPYRPAAARRRGLPARALFGLARTLWRCYVCTALVVLTLLVAGAVALVASALSMWAAHQEFITKGGSGPQPLSPFLESAATAMEVMTGGPYNYTLAQQQRASAGAGAAGVKYEDSHDAAAXXXADAANSTDPQCARLFMESTRRWTQRVCDRRADTRAAYANIRQPTWDPWEPEFDCEVRDRVGLDAFAGIKPRVMCSAALLAKASSCLAYSFGDSGIDGFLGALLRLAPNCEASLAAAAAAAPSKLPSLSNYDVHVFDPAERAKWLHAKTAKSAGYSFHLLGLGTQAQQEQGAAFRGGALLTLQRIMADLGHAGRAIHVLKLDCDGCALGALQEQVFAPMARAELRVHNVQAMEMRAERVMGLRMQPMSVLDNQPNPMARMGAFFEGADAAGLRTYHKDGNHLGCTGILCADYAFVSAEWARMAFHDSHCPATVASPEELGPLRARLPCRYRCNSYGRASAAGSSALVRQADGLHGIVQLQQLPAALTRAPGVRDIGHMRKFPCVRVDR
Sbjct: 1 MDNIAGQGEVEGGIEVEDGSSSGDSSGXXXXXXXXXXXXXXXXXXXXXXXAAQHGIENPYRPAAARRRGLPARALFGLARTLWRCYVCTALVVLTLLVAGAVALVASALSMWAAHQEFITKGGSGPQPLSPFLESAATAMEVMTGGPYNYTLAQQQRASAGAGAAGVKYEDSHDAAAXXXADAANSTDPQCARLFMESTRRWTQRVCDRRADTRAAYANIRQPTWDPWEPEFDCEVRDRVGLDAFAGIKPRVMCSAALLAKASSCLAYSFGDSGIDGFLGALLRLAPNCEASLAAAAAAAPSKLPSLSNYDVHVFDPAERAKWLHAKTAKSAGYSFHLLGLGTQAQQEQGAAFRGGALLTLQRIMADLGHAGRAIHVLKLDCDGCALGALQEQVFAPMARAELRVHNVQAMEMRAERVMGLRMQPMSVLDNQPNPMARMGAFFEGADAAGLRTYHKDGNHLGCTGILCADYAFVSAEWARMAFHDSHCPATVASPEELGPLRARLPCRYRCNSYGRASAAGSSALVRQADGLHGIVQLQQLPAALTRAPGVRDIGHMRKFPCVRVDR 567
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: A0A836CK40_9STRA (Methyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK40_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.340e-66 Identity = 130/319 (40.75%), Postives = 167/319 (52.35%), Query Frame = 1
Query: 571 CARLFMESTRRWTQRVCDRRADT-RAAYANIRQ-PTWDPWEPEFDCEVRDRVGLDAFAGIKPRVMCSAALLAKASSCLAYSFGDSGIDGFLGALLRLAPNCEASLAAAAAAAPSKLPSLSNYDVHVFDPAERAKWLHAKTAKSAGYSFHLLGLGTQAQQEQGAAFRGGALLTLQRIMADLGHAGRAIHVLKLDCDGCALGALQEQVFAPMARAELRVHNVQAMEMRAERVMGLRMQPMSVLDNQPNPMARMGAFFEGADAAGLRTYHKDGNHLGCTGILCADYAFVSAEWARMAFHDSHCPATVASPEELGPLRARLPC 1521
C+ L+ ++ RW C R+ T Y + RQ TWD WEPE+DC V R+G + + G P+ MC L CL YS G DGF +L++AP+CE VH FDP K + A +AK GY FHL+GLG+QAQ + G G L TLQ IMA LGH GR + V K+DC+GC + Q+F PM++ EL+V +Q + + P+ + FFE AD AGLR +HK+ N GC G C +YAFVSAEWAR FH +HCP VA P ELG L A L C
Sbjct: 63 CSSLYHQALHRWRTAACARKMRTPELNYHDGRQGDTWDAWEPEYDCGVETRLG-EHYWGDGPKFMCGIEFLVDRRDCLVYSIGSHEEDGFEQGILKVAPHCE---------------------VHTFDPTSDPKIMAAMSAKG-GYHFHLMGLGSQAQSDAGEVLVHGPLKTLQEIMAQLGHTGRTLDVFKIDCEGCEWDTMSAQLFGPMSKGELKVGQLQI--------------ELHLSGTPAKPLRTIQHFFEAADTAGLRVFHKERNQWGCLGWKCLEYAFVSAEWARHVFHRTHCPDGVADPAELGTLHANLDC 344
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: A0A836CMI5_9STRA (Methyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI5_9STRA) HSP 1 Score: 218 bits (556), Expect = 6.710e-60 Identity = 125/327 (38.23%), Postives = 169/327 (51.68%), Query Frame = 1
Query: 547 AANSTDPQCARLFMESTRRWTQRVCDRRADTRAAYANIRQP--TWDPWEPEFDCEVRDRVGLDAFAGIKPRVMCSAALLAKASSCLAYSFGDSGIDGFLGALLRLAPNCEASLAAAAAAAPSKLPSLSNYDVHVFDPAERAKWLHAKTAKSAGYSFHLLGLGTQAQQEQGAAFRGGALLTLQRIMADLGHAGRAIHVLKLDCDGCALGALQEQVFAPMARAELRVHNVQAMEMRAERVMGLRMQPMSVLDNQPNPMARMGAFFEGADAAGLRTYHKDGNHLGCTGILCADYAFVSAEWARMAFHDSHCPATVASPEELGPLRARLPC 1521
AA S C+ L+ E +RW +R C RR T+ + +WD WEPE C + DRVG + + G P+ +C L CL YS G S D F LL +APNCE VH FDP A+ + K+A + Y FHL+GLG+Q Q + G L TLQ +M +LGH GR I V K+DC+GC LQ+Q+ PM +L++ +Q + + + P+ P+ + +FFE ADAAGLR +HK+ NH GC G C +YAFVSAEW+R FH + CP +V +LG L A L C
Sbjct: 56 AAQSNPATCSALYEEDIQRWRRRACLRRQRTKELKLGMSATIWSWDSWEPEGGCRLEDRVG-EVYWGDGPKFVCGTEYLRDKPDCLVYSIGSSTTDSFELGLLAVAPNCE---------------------VHTFDPTVSAEVMAEKSA-AGHYQFHLMGLGSQQQSDANVMLDRGPLKTLQEMMQELGHVGRTIDVFKIDCEGCEWSTLQDQLMKPMRHGDLKIGQMQ---------IEVHLAPLG-----KKPLPGIISFFEDADAAGLRVFHKERNHWGCDGYRCLEYAFVSAEWSRHVFHKTTCPYSVKDASQLGALHATLDC 345
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: A0A835YJQ6_9STRA (Methyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJQ6_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.050e-51 Identity = 106/257 (41.25%), Postives = 138/257 (53.70%), Query Frame = 1
Query: 751 RVMCSAALLAKASSCLAYSFGDSGIDGFLGALLRLAPNCEASLAAAAAAAPSKLPSLSNYDVHVFDPAERAKWLHAKTAKSAGYSFHLLGLGTQAQQEQGAAFRGGALLTLQRIMADLGHAGRAIHVLKLDCDGCALGALQEQVFAPMARAELRVHNVQAMEMRAERVMGLRMQPMSVLDNQPNPMARMGAFFEGADAAGLRTYHKDGNHLGCTGILCADYAFVSAEWARMAFHDSHCPATVASPEELGPLRARLPC 1521
+ +C LA CL YS G S DGF +L AP+CE VH FDP A + A++ +AGY FHL+GLG++A+ G G L TLQ IMADLGHAGR + +LK+DC+GC L+EQVFAPM L V +Q + +L Q P+ + FE ADAAGLR +HK+ N +C +Y+ VSAEWAR FH +HCP +VA+P ELG +RA+L C
Sbjct: 10 KFVCGVEFLADRKDCLVYSIGSSEHDGFERGILAAAPHCE---------------------VHTFDPTSSADAMRARST-AAGYRFHLVGLGSRARSSTGGTLGAGPLRTLQEIMADLGHAGRTLDILKIDCEGCEWFTLREQVFAPMRSGALAVGQLQV--------------ELHLLRGQLRPLPAIAKLFEDADAAGLRVFHKERNAWCGAWKVCLEYSLVSAEWARHVFHRTHCPDSVATPAELGDVRAQLDC 230
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: A0A835ZCF3_9STRA (Methyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCF3_9STRA) HSP 1 Score: 186 bits (471), Expect = 5.340e-51 Identity = 106/265 (40.00%), Postives = 139/265 (52.45%), Query Frame = 1
Query: 730 AFAGIKPRVMCSAALLAKASSCLAYSFGDSGIDGFLGALLRLAPNCEASLAAAAAAAPSKLPSLSNYDVHVFDPAERAKWLHAKTAKSAGYSFHLLGLGTQAQQEQGAAFRGGALLTLQRIMADLGHAGRAIHVLKLDCDGCALGALQEQVFAPMARAELRVHNVQA-MEMRAERVMGLRMQPMSVLDNQPNPMARMGAFFEGADAAGLRTYHKDGNHLGCTGILCADYAFVSAEWARMAFHDSHCPATVASPEELGPLRARLPC 1521
++ G P+ +C LL + CL YS G + DGF L +APNCE VHVFDP + L A +A + GY FHL+GLG++AQ + G + G L TLQ +M +LGH GR I + K+DC+GC L EQVFAPM L++ +Q M + R +G AFFE ADAAG+R +HK+ NH GC G C +YAF+SA+WAR +H +HCP V P ELG L C
Sbjct: 4 SYYGDGPKFVCGVELLRERPDCLVYSIGSNMQDGFELGLQIMAPNCE---------------------VHVFDPTVDVEALGAASA-AHGYRFHLMGLGSKAQSDGGEVLKNGPLRTLQHMMEELGHTGRTIDIFKIDCEGCEWDTLGEQVFAPMREGHLKIGQLQVEMHLYNRRRLG-----------------DAAAFFEAADAAGMRIFHKERNHWGCGGWKCLEYAFISADWARFVYHKTHCPEAVEDPAELGSKGLVLQC 229
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: R1DT32_EMIHU (Methyltranfer_dom domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DT32_EMIHU) HSP 1 Score: 101 bits (252), Expect = 2.770e-20 Identity = 94/294 (31.97%), Postives = 121/294 (41.16%), Query Frame = 1
Query: 700 CEVRDRVGLDAFAGIK--------------PRVMCSAALLAKASSCLAYSFGDSGIDGFLGALLRLAPNCEASLAAAAAAAPSKLPSLSNYDVHVFDPAERAKWLHAKTAKSAGYSFHLLGLGTQAQQEQGAAFRGGALLTLQRIMADLGHAGRAIHVLKLDCDGCALGALQEQVFAPMARAELRVHNVQAMEMRAERVMGLRMQPMSVLDNQ--------------PNPMARMGAFFEGADAAGLRTYHKDGNHLG-CTGILCADYAFVSAEWARMAFHDSHCPATVASPEEL 1494
CE +RVG A IK P+ +C A+L CL YS G G GF L APNCE +H FDPA + A S H L L + A LTL +I A LGH GR I +LK+DC+GC AL +VF + L V +Q E+ A P+S+ ++ PN + FF+ A+AAG +HK+ N G C G LC +YA V A AF +SHCP+ PE L
Sbjct: 14 CESEERVGTGDGARIKRAGVPPEHLPFGDGPKFVCGPAVLGNRKDCLVYSVGSGGDWGFEQGLKAAAPNCE---------------------MHTFDPAPDEIQPYGGGAYS---KIHALALRGGESTSENA-------LTLGQIQAKLGHTGRHIDLLKVDCEGCEWDALT-RVFGDLRAGNLTVGQIQV-ELHA---------PVSITKSEERGDRAERKRIRGFPNQLRE---FFDTANAAGFYIFHKERNGWGVCDGYLCVEYALVHVSHACHAFVESHCPSLP--PEAL 260
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: A0A2P6V3B8_9CHLO (Protein-serine/threonine phosphatase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V3B8_9CHLO) HSP 1 Score: 90.1 bits (222), Expect = 5.320e-15 Identity = 81/262 (30.92%), Postives = 114/262 (43.51%), Query Frame = 1
Query: 670 TWDPWEPEFDCEVRDRVGLDAFAGIKPRVMCSAALLAKASSCLAYSFGDSGIDGFLGALLRLAPNCEASLAAAAAAAPSKLPSLSNYDVHVFDPA-ERAKWLHAKTAKSAGYSFHLLGL----GTQAQQEQGAAFRGGALLTLQRIMADLGHAGRAIHVLKLDCDGCALGALQEQVFAPMARAELRVHNVQAMEMRAERVMGLRMQPMSVLDNQPNPMARMGAFFEGADAAGLRTYHKDGNHLGCTGILCADYAFVSAEWAR 1440
T+D +EP + C R+G + G K +C + S CLAYS G +G F A+++ CE VH FDP + K+ A+ +AG FH GL G GA LL L ++ LGHAGR I +LK+DC+GC A +LR +++ E +G P A +G FF GADAAG +HK+ NH GC+G C +++ V + AR
Sbjct: 92 TFDRYEPAWTCTFDRRLGGNFGDGGK--FVCGDDAYFRRSPCLAYSVGSNGDASFENAVVQHL-GCE---------------------VHTFDPTGDSVKY--AQKVAAAGAEFHAWGLAGAVGEMVNSAAGANVSN-PLLPLGDVVTRLGHAGRHIDILKIDCEGCEYKAFSA------IWPDLRAGRYSVGQIQIELHLG-------------TPRA-VGEFFSGADAAGFAIFHKERNHWGCSGWSCVEFSLVHLDTAR 306
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: A0A7S4C0N8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0N8_CHRCT) HSP 1 Score: 78.6 bits (192), Expect = 1.850e-11 Identity = 78/282 (27.66%), Postives = 119/282 (42.20%), Query Frame = 1
Query: 673 WDPWEPEFDCEVRDRVGLDAFAGIKPRVMCSAALLA------KASSCLAYSFGDSGIDGFLGALLRLAPNCEASLAAAAAAAPSKLPSLSNYDVHVFDPAERAKWLHAKTAKSAGYS--FHLLGL---------GTQAQQEQGAAFRGGALLTLQRIMADLGHAGRAIHVLKLDCDG----CALG---ALQEQVFAPMA--RAELRVHNVQAMEMRAERVMGLRMQPMSVLDNQPNPMARMGAFFEGADAAGLRTYHKDGNHLGCTGILCADYAFVSAEWAR 1440
WD +E E+ C + + + MC +A K +SCL YSFG +G D + A+ + PNCE VH+FDP+ + T ++ GY FH GL G+ QQ A L T Q+I+ LGH GR + K+D +G LG + +F+ A ELR+ ++ + + SV P + ++F GADA GLR +HK+ N L C CA+++ +S++ A
Sbjct: 388 WDAYEAEWPCPDEENLPTRMVRD-GHKWMCGVHAMAARSGGNKQTSCLIYSFGSNGDDAWEAAMAKRLPNCE---------------------VHIFDPSLSVELAKEVTQRAQGYGGFFHPFGLVAPNAEGQLGSVVQQSSRAG--NWTLYTYQQIVEMLGHRGRTVDYFKIDIEGNEWLLYLGHDLTGKRGLFSLCAGDNPELRIGHL-----------NIELHGYSV----PRRAETIHSWFAGADACGLRVFHKELNTLACATGGCAEFSLISSQQAH 630
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: A0A1E7FU08_9STRA (Methyltranfer_dom domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FU08_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 8.490e-8 Identity = 49/183 (26.78%), Postives = 84/183 (45.90%), Query Frame = 1
Query: 919 LSNYDVHVFDPA-ERAKWLHAKTAKSAGYSFHLLGLGTQAQQEQGAAFRGGALLTLQRIMADLGHAGRAIHVLKLDCDGCALGALQEQVFAPMARAELRVHNVQAMEMRAERVMGLRMQPMSVLDNQPNPMARMGAFFEGADAAGLRTYHKDGNHLGCTGILCADYAFVSAEWARMAFHDSHC 1464
++ ++H FDP E + ++ A FH GLG + + + I+ +L H GR I +LK+DC+ C + Q+F + + L V+ +Q R+ + P ++ +FFE AD A +R +HK+ N GC G C +YAF+S ++ R ++ C
Sbjct: 262 INGCEIHTFDPTIEYSNFIGHDYA-----IFHQWGLGNDNSRMNRGKYNW-ISKSFNTIIKELNHTGRIIDILKIDCELCEWFTMP-QLFQDITNSGLIVNQIQIEMHRSSKKRQRAAIPQNIT-----------SFFEFADNAKMRIFHKERNGWGCDGYRCIEYAFISEDFLRKVNKEAIC 426
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: A0A835YR94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR94_9STRA) HSP 1 Score: 1320 bits (3416), Expect = 0.000e+0 Identity = 1072/1072 (100.00%), Postives = 1072/1072 (100.00%), Query Frame = 2
Query: 35 MRRTLTTSAVALAIAQTGNSFHAPAGSCNTASRPSASRSVSTHAGYAARCVPLRMTSEGGDSEPEPKAKEDAPPAAVKVEEEVISAPKAAKAAAPXXXXXXXXXXXXXXXXKPDPQDYINSLNPFQYVEVVDTGDKPAAKAKXXXXXXXXTKAPAAEVPRPKPAAAATAVDSKAEEESGAEVEEDIVESVKEILDEAQELEQAAEKKVKEEAAXXXXXXXXXXXXXXXXXXXKLKPAVQPKEEALVEKVKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAVKPPAAAKPAKPAXXPXXXXXXXXXXXXXXXXXPKLSVXXXXXXXXXXXXSRVEKAGEAVAGAAGGISKLLGGLFDVKGPAAVRDPQTDPTARGMLSKAKGDYSGKNLPPVDKAVLDKAMEERGGVLNEVFWKEQWAELEEEAAKAAIAARDKVKEAPEPKAEAPTKTEXXXXXXXXXXXXXXPSTPSLDIGGIFGGXXXXXXXXXXXXXXXXXXXXXPAPPAPVAEKPKXXXXXXXAVEKSAPKAAAKAEEPAGGGLFGGLSGLFGGGDKAAAQPKEKPXXXXXXXXXXXXPPRAAPAPVKAAPPLVENPFANMFGKAVYDDEETTVPVRRAEPPAPAXXXXXXXXXXXXXXXXXXXXXXEGXXXXXXXXGGGSSSSKPAPKPAAAPKAAAPKPAAAAPXXXXXXXXXXXXATLRAPPAKKEAXXXXXXXXXXXXXXTTGGGIFGGFFGGGKPAAEPKPEAAPTKPVAAKPVAAAKPAPARSVRPLFGGSAAAPKKVEQAATPXXXXXXXXKPAAGGGGLGGFNLFGAKKPVEKAASAVSAAXXXXXXXXXXXXXXXXXXXXRTQKKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXXAGAVAKAADPFAFAQGKLSAANYDLFVARTKLFARGGINARNYYDTLETLFGKGPRGVGATIGNVVNALPASKARLVEDVYKGLNK 3250
MRRTLTTSAVALAIAQTGNSFHAPAGSCNTASRPSASRSVSTHAGYAARCVPLRMTSEGGDSEPEPKAKEDAPPAAVKVEEEVISAPKAAKAAAPXXXXXXXXXXXXXXXXKPDPQDYINSLNPFQYVEVVDTGDKPAAKAKXXXXXXXXTKAPAAEVPRPKPAAAATAVDSKAEEESGAEVEEDIVESVKEILDEAQELEQAAEKKVKEEAAXXXXXXXXXXXXXXXXXXXKLKPAVQPKEEALVEKVKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAVKPPAAAKPAKPAXXPXXXXXXXXXXXXXXXXXPKLSVXXXXXXXXXXXXSRVEKAGEAVAGAAGGISKLLGGLFDVKGPAAVRDPQTDPTARGMLSKAKGDYSGKNLPPVDKAVLDKAMEERGGVLNEVFWKEQWAELEEEAAKAAIAARDKVKEAPEPKAEAPTKTEXXXXXXXXXXXXXXPSTPSLDIGGIFGGXXXXXXXXXXXXXXXXXXXXXPAPPAPVAEKPKXXXXXXXAVEKSAPKAAAKAEEPAGGGLFGGLSGLFGGGDKAAAQPKEKPXXXXXXXXXXXXPPRAAPAPVKAAPPLVENPFANMFGKAVYDDEETTVPVRRAEPPAPAXXXXXXXXXXXXXXXXXXXXXXEGXXXXXXXXGGGSSSSKPAPKPAAAPKAAAPKPAAAAPXXXXXXXXXXXXATLRAPPAKKEAXXXXXXXXXXXXXXTTGGGIFGGFFGGGKPAAEPKPEAAPTKPVAAKPVAAAKPAPARSVRPLFGGSAAAPKKVEQAATPXXXXXXXXKPAAGGGGLGGFNLFGAKKPVEKAASAVSAAXXXXXXXXXXXXXXXXXXXXRTQKKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXXAGAVAKAADPFAFAQGKLSAANYDLFVARTKLFARGGINARNYYDTLETLFGKGPRGVGATIGNVVNALPASKARLVEDVYKGLNK
Sbjct: 1 MRRTLTTSAVALAIAQTGNSFHAPAGSCNTASRPSASRSVSTHAGYAARCVPLRMTSEGGDSEPEPKAKEDAPPAAVKVEEEVISAPKAAKAAAPXXXXXXXXXXXXXXXXKPDPQDYINSLNPFQYVEVVDTGDKPAAKAKXXXXXXXXTKAPAAEVPRPKPAAAATAVDSKAEEESGAEVEEDIVESVKEILDEAQELEQAAEKKVKEEAAXXXXXXXXXXXXXXXXXXXKLKPAVQPKEEALVEKVKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAVKPPAAAKPAKPAXXPXXXXXXXXXXXXXXXXXPKLSVXXXXXXXXXXXXSRVEKAGEAVAGAAGGISKLLGGLFDVKGPAAVRDPQTDPTARGMLSKAKGDYSGKNLPPVDKAVLDKAMEERGGVLNEVFWKEQWAELEEEAAKAAIAARDKVKEAPEPKAEAPTKTEXXXXXXXXXXXXXXPSTPSLDIGGIFGGXXXXXXXXXXXXXXXXXXXXXPAPPAPVAEKPKXXXXXXXAVEKSAPKAAAKAEEPAGGGLFGGLSGLFGGGDKAAAQPKEKPXXXXXXXXXXXXPPRAAPAPVKAAPPLVENPFANMFGKAVYDDEETTVPVRRAEPPAPAXXXXXXXXXXXXXXXXXXXXXXEGXXXXXXXXGGGSSSSKPAPKPAAAPKAAAPKPAAAAPXXXXXXXXXXXXATLRAPPAKKEAXXXXXXXXXXXXXXTTGGGIFGGFFGGGKPAAEPKPEAAPTKPVAAKPVAAAKPAPARSVRPLFGGSAAAPKKVEQAATPXXXXXXXXKPAAGGGGLGGFNLFGAKKPVEKAASAVSAAXXXXXXXXXXXXXXXXXXXXRTQKKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXXAGAVAKAADPFAFAQGKLSAANYDLFVARTKLFARGGINARNYYDTLETLFGKGPRGVGATIGNVVNALPASKARLVEDVYKGLNK 1072
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: D7G5E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E7_ECTSI) HSP 1 Score: 166 bits (420), Expect = 3.910e-38 Identity = 102/234 (43.59%), Postives = 130/234 (55.56%), Query Frame = 2
Query: 2612 KKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXXAGAVAKA---------------------ADPFAFAQGKLSAANYDLFVARTKLFARGGINARNYYDTLETLFGKGPRGVGATIGNVVNALPASKARLVEDVYKGLNK 3250
K MDD+F+K VS +LRR+QSKIK+FQ +TDRFRGGL+ AP YY VE LFG NV +++ PLLA+LPE DKR+ L+ KA AK LFG A A A ADP+AFA K+S +Y+LF RT L+ARGGINARNYYDTL T+FG +GV A + ++ ALP +K +L++DV GL+K
Sbjct: 785 KTMDDSFLKKVSVMLRRNQSKIKKFQQLTDRFRGGLIKAPVYYAGVEELFGEDNVEEIIGPLLAALPENDKRKTLQAVYSKAQRAK-------------NGEGESDGGGIASLFGGWGGKSKADTAAKPAAAPAPAKKGXXXXXXXXXXXXXXXAADPYAFAAAKISGKDYELFKTRTTLYARGGINARNYYDTLATVFGA--KGVSAQLPALLKALPQNKRKLLQDVVDGLSK 1003
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: A0A6H5L7G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G1_9PHAE) HSP 1 Score: 124 bits (310), Expect = 6.660e-25 Identity = 103/178 (57.87%), Postives = 121/178 (67.98%), Query Frame = 2
Query: 2612 KKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXXAGAVAKAA----------DPFAFAQGKLSAANYDLFVARTKLFARGGINAR 3115
K MDD+F++ VS +LRR+QSKIK+FQ +TDRFRGGL+ AP YY VE LFG NV +++ PLLA+LPE DKR+ L+ KA AK XXXXXXXXXXXXXXXXXXXX XXXXXXXX AA DP+AFA KLS +Y+LF ART L+ RGGINAR
Sbjct: 906 KTMDDSFLRKVSVMLRRNQSKIKKFQQLTDRFRGGLIKAPVYYAGVEELFGEDNVEEIIGPLLAALPENDKRKTLQAVYSKAQRAKNGEGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKGSMKKPAAGGKXXXXXXXDPYAFAAAKLSGKDYELFKARTTLYVRGGINAR 1083
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Match: K8YP81_NANGC (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YP81_NANGC) HSP 1 Score: 72.0 bits (175), Expect = 5.580e-9 Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 2
Query: 2603 RTQKKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPAN-VSKVLQPLLASLPEQDKRRALED 2842
R +KMDDAF++TVS L+ ++ +I+ FQ TDR+R L++A AY AV +LFG A +VL PL LPE KRR L D
Sbjct: 555 RMPRKMDDAFLRTVSRKLQGNRLRIRSFQLQTDRYRNSLLSAGAYVDAVVSLFGSAKEAEEVLLPLTRWLPEASKRRGLSD 635 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
BLAST of jgi.p|Trimin1|350751 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12364 ID=mRNA_12364|Name=jgi.p|Trimin1|350751|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1947bp|location=Sequence derived from alignment at Contig_71:24056..30351- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGACAACATCGCCGGCCAAGGCGAAGTCGAAGGCGGGATTGAGGTTGAback to top protein sequence of jgi.p|Trimin1|350751 >Trimin1|350751|estExt_Genemark1.C_Ctg_710003 ID=Trimin1|350751|estExt_Genemark1.C_Ctg_710003|Name=jgi.p|Trimin1|350751|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=568bp MDNIAGQGEVEGGIEVEDGSSSGDSSGSSGRPAATTGTPGAAAAAAAPAAback to top mRNA from alignment at Contig_71:24056..30351- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12364 ID=mRNA_12364|Name=jgi.p|Trimin1|350751|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6296bp|location=Sequence derived from alignment at Contig_71:24056..30351- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_71:24056..30351- >mRNA_12364 ID=mRNA_12364|Name=jgi.p|Trimin1|350751|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1704bp|location=Sequence derived from alignment at Contig_71:24056..30351- (Tribonema minus UTEX_B_3156 )back to top |