Trimin1|170320|e_gw1.71.54.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|170320
Unique NameTrimin1|170320|e_gw1.71.54.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length263
Homology
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BLAST of jgi.p|Trimin1|170320 vs. uniprot
Match: A0A835YUB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUB6_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.470e-30
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 
Query:    1 MLHLFLEQKRQVDSGDFNKPLGALPASLTYIKVVGCYFDQALGPLPPALVHLAVDSAFT 59
            MLHLFLEQKRQVDSGDFNKPLGALPASLTYIKVVGCYFDQALGPLPPALVHLAVDSAFT
Sbjct:    1 MLHLFLEQKRQVDSGDFNKPLGALPASLTYIKVVGCYFDQALGPLPPALVHLAVDSAFT 59
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170320 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YUB6_9STRA1.470e-30100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 29..235
e-value: 4.7E-13
score: 50.3
IPR008615FNIPPFAMPF05725FNIPcoord: 98..135
e-value: 9.7E-7
score: 28.9
NoneNo IPR availablePANTHERPTHR32134:SF107FNIP REPEAT-CONTAINING PROTEIN DDB_G0289381-RELATEDcoord: 133..242
coord: 15..100
NoneNo IPR availablePANTHERPTHR32134:SF107FNIP REPEAT-CONTAINING PROTEIN DDB_G0289381-RELATEDcoord: 57..157
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 57..157
coord: 15..100
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 133..242
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 21..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_71contigContig_71:446376..447164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170320mRNA_12414Tribonema minus UTEX_B_3156 mRNAContig_71 446376..447164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|170320|e_gw1.71.54.1 ID=Trimin1|170320|e_gw1.71.54.1|Name=jgi.p|Trimin1|170320|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=263bp
MLHLFLEQKRQVDSGDFNKPLGALPASLTYIKVVGCYFDQALGPLPPALV
HLAVDSAFTRALGPLPPMLRTLSLGRLLDHSLGVLPTALMHLKLGAAFNQ
PLGALPPKLTVLSLGKDFNRPLRPLPPSLAELRIGACFDQPLAPLPPALV
ELHVGDAFSTALGPLPAGLAHLTLGNAFSRALGPLPAGLRSLSLGNAFDR
ALGPLPAGLGSLSLGDAFDRALGPLPVGLASVELGLAFSQPLGHVPRLCY
VRRRHCAWAVAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP