Trimin1|350749|estExt_Genemark1.C_Ctg_700080 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350749
Unique NameTrimin1|350749|estExt_Genemark1.C_Ctg_700080
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length261
Homology
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BLAST of jgi.p|Trimin1|350749 vs. uniprot
Match: A0A835YNZ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNZ8_9STRA)

HSP 1 Score: 500 bits (1287), Expect = 1.460e-178
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0 
Query:    1 MMLEKAMTMAAAPIKSPVKRQPAGDHSSSGSSSSPAGSCSDAQTWVQDSAHGAVTDAPPCCPGSPEEIMSVDEERMLRGAFIIHAELPAPLTRSQVMEPMLPSDPAACLRKFRAILLAVGLKCDDVQFQRDFDQARGYYISEGEAAVVRAWHDLHAGTGRRARDGRDFIAAADLRRVLTHECERLTDEEAAELLQECRPDADGRVYFEERGARPVATRRRRAHGPAAAAALRSSSAAEGPRGERIRSAGLGAPPQQRCAR 260
            MMLEKAMTMAAAPIKSPVKRQPAGDHSSSGSSSSPAGSCSDAQTWVQDSAHGAVTDAPPCCPGSPEEIMSVDEERMLRGAFIIHAELPAPLTRSQVMEPMLPSDPAACLRKFRAILLAVGLKCDDVQFQRDFDQARGYYISEGEAAVVRAWHDLHAGTGRRARDGRDFIAAADLRRVLTHECERLTDEEAAELLQECRPDADGRVYFEERGARPVATRRRRAHGPAAAAALRSSSAAEGPRGERIRSAGLGAPPQQRCAR
Sbjct:    1 MMLEKAMTMAAAPIKSPVKRQPAGDHSSSGSSSSPAGSCSDAQTWVQDSAHGAVTDAPPCCPGSPEEIMSVDEERMLRGAFIIHAELPAPLTRSQVMEPMLPSDPAACLRKFRAILLAVGLKCDDVQFQRDFDQARGYYISEGEAAVVRAWHDLHAGTGRRARDGRDFIAAADLRRVLTHECERLTDEEAAELLQECRPDADGRVYFEERGARPVATRRRRAHGPAAAAALRSSSAAEGPRGERIRSAGLGAPPQQRCAR 260
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BLAST of jgi.p|Trimin1|350749 vs. uniprot
Match: A0A7S3Y6E4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6E4_HETAK)

HSP 1 Score: 57.0 bits (136), Expect = 9.060e-6
Identity = 24/65 (36.92%), Postives = 40/65 (61.54%), Query Frame = 0 
Query:  144 EAAVVRAWHDLHAGTGRRARDGRDFIAAADLRRVLTHECERLTDEEAAELLQECRPDADGRVYFE 208
            E  + + + DL  GT     +G  FI A   R ++T   ++LTDEEA E+L++C+ D +GR++F+
Sbjct:  294 EEVIEKNFEDLWKGTNANTAEGHKFIPATKFREIMTTVADKLTDEEADEMLRDCKADQEGRIFFQ 358
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350749 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YNZ8_9STRA1.460e-178100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y6E4_HETAK9.060e-636.92Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 162..210
e-value: 2.0E-7
score: 33.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..260
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 163..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_70contigContig_70:691179..696629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350749mRNA_10922Tribonema minus UTEX_B_3156 mRNAContig_70 690864..696629 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350749|estExt_Genemark1.C_Ctg_700080 ID=Trimin1|350749|estExt_Genemark1.C_Ctg_700080|Name=jgi.p|Trimin1|350749|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=261bp
MMLEKAMTMAAAPIKSPVKRQPAGDHSSSGSSSSPAGSCSDAQTWVQDSA
HGAVTDAPPCCPGSPEEIMSVDEERMLRGAFIIHAELPAPLTRSQVMEPM
LPSDPAACLRKFRAILLAVGLKCDDVQFQRDFDQARGYYISEGEAAVVRA
WHDLHAGTGRRARDGRDFIAAADLRRVLTHECERLTDEEAAELLQECRPD
ADGRVYFEERGARPVATRRRRAHGPAAAAALRSSSAAEGPRGERIRSAGL
GAPPQQRCAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair