mRNA_10858 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350716
Unique NamemRNA_10858
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|350716 vs. uniprot
Match: A0A835YM57_9STRA (Putative RNA methylase family UPF0020-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM57_9STRA)

HSP 1 Score: 805 bits (2080), Expect = 3.880e-294
Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 1
Query:    1 MGQTEAAVPGVDSYLLLCCGGLEHVVADALRERLHDPGISVEPIPRQELTNNHSGGAAGVGKLLVSVPHASDSADVRAALRGDTEPCIIIGLALIQHQTGTVKPEKEAGLQELGAAVAQSQRWAAALNLLARHLRDQGEAAAAQRIAEGTLRFRSSCVRDGPHDWSSNEAMASVGEAVGERFRWGVSMSAFDCDVCTIVLRDCMACGLTLKLLHHKSGNRLPHEPRAYLQRGGRIAMLRPSTAHALLRAARVAPGATLLDPMGGIGTIAVEAALAVAGARCISSDTSVEATACARENAAACAGACVGSVEVHQWDAAALQLPDASVTHVVTDMPFGRQYGSARANKQQVPRLLSEWRRVLKVGGRAVLLSTYSHVIVAAAAAVDVAQGGEGARWRVEQDLPVNIGGVPASVVVLERL 1251
            MGQTEAAVPGVDSYLLLCCGGLEHVVADALRERLHDPGISVEPIPRQELTNNHSGGAAGVGKLLVSVPHASDSADVRAALRGDTEPCIIIGLALIQHQTGTVKPEKEAGLQELGAAVAQSQRWAAALNLLARHLRDQGEAAAAQRIAEGTLRFRSSCVRDGPHDWSSNEAMASVGEAVGERFRWGVSMSAFDCDVCTIVLRDCMACGLTLKLLHHKSGNRLPHEPRAYLQRGGRIAMLRPSTAHALLRAARVAPGATLLDPMGGIGTIAVEAALAVAGARCISSDTSVEATACARENAAACAGACVGSVEVHQWDAAALQLPDASVTHVVTDMPFGRQYGSARANKQQVPRLLSEWRRVLKVGGRAVLLSTYSHVIVAAAAAVDVAQGGEGARWRVEQDLPVNIGGVPASVVVLERL
Sbjct:    1 MGQTEAAVPGVDSYLLLCCGGLEHVVADALRERLHDPGISVEPIPRQELTNNHSGGAAGVGKLLVSVPHASDSADVRAALRGDTEPCIIIGLALIQHQTGTVKPEKEAGLQELGAAVAQSQRWAAALNLLARHLRDQGEAAAAQRIAEGTLRFRSSCVRDGPHDWSSNEAMASVGEAVGERFRWGVSMSAFDCDVCTIVLRDCMACGLTLKLLHHKSGNRLPHEPRAYLQRGGRIAMLRPSTAHALLRAARVAPGATLLDPMGGIGTIAVEAALAVAGARCISSDTSVEATACARENAAACAGACVGSVEVHQWDAAALQLPDASVTHVVTDMPFGRQYGSARANKQQVPRLLSEWRRVLKVGGRAVLLSTYSHVIVAAAAAVDVAQGGEGARWRVEQDLPVNIGGVPASVVVLERL 417          
BLAST of jgi.p|Trimin1|350716 vs. uniprot
Match: A0A813GQB1_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GQB1_POLGL)

HSP 1 Score: 143 bits (361), Expect = 1.860e-33
Identity = 145/405 (35.80%), Postives = 192/405 (47.41%), Query Frame = 1
Query:   43 LLLCCGGLEHVVADALRERLHDPGISVEPIPRQELTNNHSGGAAGVGKLLVSVPH---ASDSADVRAALRGDTEPCIIIGLALIQHQTGTVKPEKEAGLQELGAAVAQSQRWAAALNLL----AR--------------------HLRDQGEAAAAQRIAEGTLRFRSSCVRDGPHDWSSNEAMASVGEAVGERFRWGVSMSAFDCDVCTIVLRDCMACGLTL--KLLHHKSGNR--------LPHEPRAYLQRG-----GRIAMLRPSTAHALLRAARVAPGATLLDPMGGIGTIAVEAALAVAGARCISSDTSVEATACARENAAACAGACVGS---VEVHQWDAAALQLPDASVTHVVTDMPFGRQYGSARANKQQVPRLLSEWRRVLKVGGRAVLLSTYSH 1122
            LLL C GLE V   AL+E   D    ++ +P   +      G A  GK+L++       S   D+     G      +  LA ++       P   AGL EL  A+  S RW AA+ L     AR                     LR    AAA  R  +  LRFR S VRDG H++ ++E M  +G A   R  W VS++ +D ++  +V  D    GL L  +     SG          LP E R YL+       GR+  LRPST H LLR A +  G  +LDPMGG+GTIA+EAA+   G    +SD S++AT  A  NAAA A  C+ S   + V Q DA  LQL   S+  VVTD+PFG +      N   +P   +E  RVL+ GGRAV+L T +H
Sbjct:   20 LLLVCQGLEDVCCAALQEA--DGSCRLKVLPAGGID-----GEASCGKILLATCERDGVSRLLDLACQAPGVQSAFAL--LAAVEKL-----PPSLAGLVELAVALEASPRWPAAVGLWQSARARWLGCSVQAEEERREEYGTEFRLRRLLAAAAGSRKKKAPLRFRGSAVRDGQHEFDTSEVMGRLGGAAKRRMGWQVSLTKYDTELFAVVSHDVAVVGLPLFPEWRGKASGLSDRPERFFVLPREVRPYLRPDVHINCGRM-RLRPSTCHLLLRLAGIKAGDKVLDPMGGVGTIAIEAAVHWPGVSARTSDISMDATKAAELNAAA-ARPCLASGSSLSVAQEDARCLQLEAGSMDAVVTDVPFGNRNRLVWVNGL-LPAFTAELARVLRPGGRAVMLMTRAH 407          
BLAST of jgi.p|Trimin1|350716 vs. uniprot
Match: A0A485LJ24_9STRA (Aste57867_20172 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJ24_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.560e-33
Identity = 131/427 (30.68%), Postives = 190/427 (44.50%), Query Frame = 1
Query:   31 VDS--YLLLCCGGLEHVVADALRERLHDPGISVEPI------PRQELTNNHSGGAAGVGKLLVSVPHASDSADVRAALRGDTEPCIIIGLALIQHQTGTVKPEKEAGLQELGAAVAQSQRWAAALNLLARHLRDQGEAAAAQRIAEGTLRFRSSCVRDGPHDWSSNEAMASVGEAVGERFRWGVSMSAFDCDVCTIVLRDCMACGLTLKLLHHKSGNRLPHEPRAYLQRGGRIA-------------MLRPSTAHALLRAARVAPGATLLDPMGGIGTIAVEAALAVAGARCISSDTSVEATACARENAAACAGACVGSVEVHQWDAAALQLPDASVTHVVTDMPFGRQYGSARANKQQVPRLLSEWRRVLKVGGRAVLLSTYSHVIVAAAAAVDVAQGGEGARWRVEQDLPVNIGGVPASVVVLER 1248
            VDS  Y+LL   GLEH+    + E+L    ++   +      P+ ++      G A VGKLL+     S  A V+A        C I           T+     AG   +   VA +  W AAL L   H           + +  ++RFR+SCVRDG H +SS      VG AV  +F +GVS++AFD +V  +V+   +  GL+L             +P A   RG R+A              LRPSTA+ +L+ A  + G  +LD M G+GT+   +    A       D S +A A A  N             V QW +A L +   +V  V+ DMPFG   G++  N +  P+ + E  RVL+ GGRAVLL     ++V +   V            + QDLPV IGG+   + +LE+
Sbjct:    3 VDSAAYVLLVIRGLEHLAIKEIHEKLEVTSLTTLTLQADPNNPKMDVMR----GEAAVGKLLLHT--TSTPAQVKAL-------CSIQAFLAYLAHADTIPTTDIAGPDVIATLVATASTWPAALQLWEAHC---------PQSSASSVRFRASCVRDGKHAYSSETIAGKVGAAVVAKFGYGVSLAAFDLEVVCLVMHHHVVLGLSLA-----------DDPEAINFRGSRLAPERRRIPTMKYMSTLRPSTAYLMLQLAECSIGDIVLDCMCGVGTLPASSVF-WAPVVAFGGDISTDAVAQANTNFQG------QRANVCQWSSAHLPVRSNAVDCVLVDMPFGLLCGNSTQNAKLYPKAIKEMARVLRPGGRAVLLVMSKKLLVHSVRNVP--------SIAIVQDLPVTIGGLGVGIYILEK 381          
BLAST of jgi.p|Trimin1|350716 vs. uniprot
Match: K3X044_GLOUD (UPF0020 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X044_GLOUD)

HSP 1 Score: 135 bits (339), Expect = 5.590e-32
Identity = 131/418 (31.34%), Postives = 201/418 (48.09%), Query Frame = 1
Query:   31 VDSYLLLCCGGLEHVVADALRERLHDPGI---SVEPIPRQELTNNHSGGAAGVGKLLVSVPHASDSADVRAALRGDTEPCIIIGLALIQH------QTGTVKPEKEAGLQELGAAVAQSQRWAAALNLLARHLRDQGEAAAAQRIAEGTLRFRSSCVRDGPHDWSSNEAMASVGEAVGERFRWGVSMSAFDCDVCTIVLRDCMACGLTLKLLHH-KSGNRLPHEPRAYLQRGGR-IAMLRPSTAHALLRAARVAPGATLLDPMGGIGTIAVEAA-LAVAGARCISSDTSVEATACARENAAACAGACVGSVEVHQWDAAALQLPDASVTHVVTDMPFGRQYGSARANKQQVPRLLSEWRRVLKVGGRAVLLSTYSHVIVAAAAAVDVAQGGEGARWRVEQDLPVNIGGVPASVVVLER 1248
            V +YLLL   G+E +V   +R +L    +   SV+  P ++  N   G AA VG++L               LR  + P  ++ L  +Q       Q+  V  ++ AGL+++   V  +  W  AL L   H       AA ++ A     FR SCVRDG H + S E    +G AV ++F W V++ AFD ++  I+  + M  G++L      K  +RL +E R  +    + I+ LRPST + + + A    G   LD M G+GTI +  A  A      +  +    A + A +NAA      V +  + QWDA AL L   S+  V+ DMPFG + G+ R N +  P+L+ E  RVL+ GGRAV+L     + +++   +          +RV Q   VNIGG+   + VLE+
Sbjct:   17 VPTYLLLVMRGMEWLVEKEIRRKLQVTYLEICSVQNDPARKNMNVMQGEAA-VGRIL---------------LRTTSTPAEVMKLQSVQATLAFLVQSDAVITDRAAGLEQMAKLVTDAD-WEPALRLWRAHFPSAD--AAPKKPA-----FRGSCVRDGRHAYRSMEVAGEIGSAVIDKFGWDVNLVAFDLEIVCILYHNFMITGISLADTSKIKFCSRLANEDRKGVTADVKYISTLRPSTTYLMFQLAEYKVGEIFLDSMCGVGTIPIWCAEFADNNLFALGGELDDLAVSKAGQNAATS----VRNTNIMQWDATALPLRSQSIDKVIVDMPFGVRCGNHRINNKIYPKLMKELIRVLRDGGRAVILVMSKKLFLSSFQHLP---------FRVAQVHEVNIGGLAGGIYVLEK 397          
BLAST of jgi.p|Trimin1|350716 vs. uniprot
Match: A0A7C3B9X7_9CHLR (RNA methyltransferase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7C3B9X7_9CHLR)

HSP 1 Score: 122 bits (306), Expect = 1.370e-28
Identity = 97/265 (36.60%), Postives = 137/265 (51.70%), Query Frame = 1
Query:  457 FRSSCVRDGPHDWSSNEAMASVGEAVGERFRWGVSMSAFDCDVCTIVLRDCMACGLTLKLLHHKSGNRLPHEPRAYLQRGGRIAMLRPSTAHALLRAARVAPGATLLDPMGGIGTIAVEAALAVAGARCISSDTSVEATACARENAAACAGACVGSVEVHQWDAAALQLPDASVTHVVTDMPFGRQYGSARANKQQVPRLLSEWRRVLKVGGRAVLLSTYSHVIVAAAAAVDVAQGGEGARWRVEQDLPVNIGGVPASVVVLERL 1251
            FR +  R G H + S +  A++G  +  RF W V +  F+ +V   +  D +  G+TL      S   L    R      GR A L+ S A+A++R AR  PG  L+DPM G+GTI +EAALA  G RC   D S  A + A  NA          V + +W+   L LP+ SV  +V DMPFGR+ GS   N++  P  L E  RVL+V GRAVLL+    ++        + +G    RWR++    VN+GG+ A + +L RL
Sbjct:    5 FRVTAQRSGDHAYQSPDIAAALGTGLVCRFGWPVKLKGFNLEVMAHLQGDELTLGITL------SPEGLYRRERVAW---GRTA-LKGSIAYAMVRLARPRPGELLVDPMCGVGTIPIEAALAWPGLRCWGGDLSWSAVSRAALNARHVNA----PVHLFRWNVRRLPLPEGSVDALVCDMPFGRRVGSHELNRRIYPPALREMARVLRVDGRAVLLTLEKRLME------QILRGDP--RWRLDAVHLVNVGGLEARLYLLRRL 247          
BLAST of jgi.p|Trimin1|350716 vs. uniprot
Match: A0A812MZ83_9DINO (Thumpd3 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812MZ83_9DINO)

HSP 1 Score: 125 bits (313), Expect = 3.200e-27
Identity = 96/240 (40.00%), Postives = 130/240 (54.17%), Query Frame = 1
Query:  454 RFRSSCVRDGPHDWSSNEAMASVGEAVGERFRWGVSMSAFDCDVCTIVLRDCMACGLTLKLLHHKSGNRL----------PHEPRAYLQRG-----GRIAMLRPSTAHALLRAARVAPGATLLDPMGGIGTIAVEAALAVAGARCISSDTSVEATACARENAAACAG--ACVGSVEVHQWDAAALQLPDASVTHVVTDMPFGRQYGSARANKQQVPRLLSEWRRVLKVGGRAVLLSTYSH 1122
            RFR+S VRDG HD+++ + M  +G A   R  W V+++ +D +V  +V       GL L      +   L          P E R YL+       GR+  LRPST   LL+ A V  G+TLLDPMGG+GTIA+EAA+ +   R ++SD S +AT  A+ N AA A   A   ++ V Q DA +L    AS+  VVTD+PFG +      N   +P  L+E  RVL+ GGRA LL T  H
Sbjct:  163 RFRASAVRDGRHDFAAGQVMGKLGGAAKRRMGWEVNLTKYDTEVFAVVCGGIAVVGLPLFAEWRGAACGLSDRPERFFVLPREVRPYLRPDVHMNFGRM-RLRPSTCFLLLQVAGVKEGSTLLDPMGGVGTIAIEAAVRIPHVRALTSDISWDATQAAKLNVAAAAPHLASGSTLVVSQEDARSLPNEAASIDFVVTDVPFGNRNRLVWVNGL-LPAFLAEMSRVLRPGGRAALLMTRGH 400          
BLAST of jgi.p|Trimin1|350716 vs. uniprot
Match: A0A812MHK0_9DINO (Thumpd3 protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812MHK0_9DINO)

HSP 1 Score: 111 bits (278), Expect = 6.920e-23
Identity = 130/419 (31.03%), Postives = 181/419 (43.20%), Query Frame = 1
Query:   40 YLLLCCGGLEHVVADALRERLHDPGISVEPIPRQELTNNHSGGAAGVGKLLVSVPHASDSADVRAALRGDTEPC-----IIIGLALIQHQTGTVKPEKEAGLQELGAAVAQSQRWAAALNLLARHLRDQGEAAAAQRIAEGTLRFRSSCVRDGPHDWSSNEAMASVGEAVGERFRWGVSMSAFDCDVCTIVLRDCMACGLTLKLLHHK-----SGNRLPHEPRAYLQRGGRIAMLRPSTAHALLRAARVAPGATLLDPMGGIGTIAVEAALAVAGARCISSDTSVEATACARENAAACAGACVG------SVEVHQWDAAALQLPDASVTHVVTDMPFGRQYGSARANKQQVPRLLSEWRRVLKVGGRAVLLSTYSHVIVAAAAAVDVAQGGEGARWRVEQDLPVNIGGVPASVVVLER 1248
            YLLLC  GLE   A+AL  R     +    IP  +     S G A VGKL+V +              G+  PC     II   AL+   TG +  +KEA +++L         W A L      L        A    E T  FR+S VRDG H+++S EAM +VG  VG    W V++  +D +V  I+ RD +  GL+   L          ++LP E R +     R   LR STA  LL  A V+ G  LLD  GG+GTIA+EAA      R +S+D S    AC R  A   A   +G      SVEV                 VV+++PFG       +N      LL+  +RV++ GGR VL++  S        +  + +     +W   +    N+GG    ++   R
Sbjct:   68 YLLLCTRGLEDQ-AEALLWRSLGREVPSWRIPPPQDLPRVSEGHAAVGKLVVGLED------------GEEFPCGGIPGIIHIYALVDSATG-LSDDKEAAMKQLLT-------WTAGLGP---ELLTAVRLTPASAATEAT--FRASVVRDGEHNFTSEEAMPAVGGGVGMAMPWKVNLKTYDIEVTAIIHRDTVVLGLSCAQLGKSRRGATQPSKLPREQRPWHLSDARH--LRFSTARLLLELAEVSSGDRLLDLCGGMGTIALEAACCFPDLRAVSADVSQR--ACQRAEANVAAARSLGLLGPGSSVEVLVRGVLGWTRSSQEFDVVVSELPFGVSISILDSNV-----LLTALQRVVRPGGRVVLIAPRSE-------SPSIEEHTLSDKWSDYRRCDGNVGGTSVHILYFRR 444          
BLAST of jgi.p|Trimin1|350716 vs. uniprot
Match: A0A7C6DLR0_9CHLR (Methyltransferase domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C6DLR0_9CHLR)

HSP 1 Score: 110 bits (274), Expect = 9.610e-23
Identity = 69/182 (37.91%), Postives = 106/182 (58.24%), Query Frame = 1
Query:  706 AMLRPSTAHALLRAARVAPGATLLDPMGGIGTIAVEAALAVAGARCISSDTSVEATACARENAAACAGACVGSVEVHQWDAAALQLPDASVTHVVTDMPFGRQYGSARANKQQVPRLLSEWRRVLKVGGRAVLLSTYSHVIVAAAAAVDVAQGGEGARWRVEQDLPVNIGGVPASVVVLERL 1251
            A L+P+ AHA++  +R  P   +LDPM G+GTI +E A+     + I+ D   +A +    N     G     + + +WDAA L L D+ V+ V+T++PFGRQ GS ++N    PRLL+EW RVL+ GGR VLL+T S ++   AA        +  R R+ + L V + G+PA++ V+ R+
Sbjct:  282 ASLKPTVAHAMVLLSRPRPDDVVLDPMCGVGTIIIERAMHSRFRQLIAGDLDRQAVSATLRNV----GPRYKPISIQRWDAATLPLADSCVSAVLTNLPFGRQVGSHQSNLALYPRLLAEWARVLRPGGRMVLLTTESDLVERVAA--------DDRRLRISRRLSVIVRGLPATLYVIARV 451          
BLAST of jgi.p|Trimin1|350716 vs. uniprot
Match: A0A7S3SZ08_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SZ08_EMIHU)

HSP 1 Score: 106 bits (265), Expect = 4.360e-22
Identity = 115/338 (34.02%), Postives = 152/338 (44.97%), Query Frame = 1
Query:   16 AAVPGVDSYLLLCCGGLEHVVADALRERLHDPGISVEPIPRQELTNNHSGGAAGVGKLLVSVPHASDSADVRAALRGDTEPCIIIGLALIQHQTGTVKPEKEAGLQELGAAVAQ--SQRWAAALNLLARHLRDQGEAAAAQRIAEGTLRFRSSCVRDGPHDWSSNEAMASVGEAVGE-RFRWGVSMSAFDCDVCTIVLRDCMACGLTLKLLHHKSGNRLPHEPRAYLQRGGRIAMLRPSTAHALLRAARVAPGATLLDPMGGIGTIAVEAALAVAGARCISSDTSVEATACARENAAACAGACVGSVEVHQWDAAALQ----LPDASVTHVVTDMPFG 1008
            AAV  +  Y LL   GLE V   AL       G+    +P        S G+AG   +LV+      S     A R  + P +   LA++      V+ E E G   L AAV     +RW +A+   A H         A  +      FR + +R G HD+ S    +++G AV   +  W V + A D  V  +++   +  G  L     +  + LP EPR +L RG R A +RP  A  L R    A G  LLDP GG+G +A+EAAL +A     S D    A   AR NAAA A    G V VH  DAA L     LP ASV  V+ D+PFG
Sbjct:   26 AAVVLMHDYALLTTAGLESVALHALASEC---GLRASALPAPTARKGESFGSAGGLGILVA------SRQEPLAARALSAPVLQAALAVV------VRCEVEDG-DVLAAAVGSVSEERWRSAMRTHAAH---------AAPLPPSAPSFRIASLRAGQHDFDSRALSSALGAAVSALQPSWRVDLEAPDVCVLALLVNRSLLIGALLPPFSPRKSDPLPMEPRQWLVRGER-AHMRPHRAALLARLLAPADGEVLLDPTGGVGILAIEAAL-LASVTAHSVDLDPAACDAARANAAAAAPRLRGRVTVHCGDAARLGGEVGLPRASVDCVLADLPFG 336          
BLAST of jgi.p|Trimin1|350716 vs. uniprot
Match: A0A1Q9EYT3_SYMMI (THUMP domain-containing protein 3 n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EYT3_SYMMI)

HSP 1 Score: 107 bits (266), Expect = 3.240e-21
Identity = 123/376 (32.71%), Postives = 167/376 (44.41%), Query Frame = 1
Query:   40 YLLLCCGGLEHVVADALRERLHDPGISVEPIPRQELTNNHSGGAAGVGKLLVSVPHASDSADVRAALRGDTEPC-----IIIGLALIQHQTGTVKPEKEAGLQELGAAVAQSQRWAAALNLLARHLRDQGEAAAAQRIAEGTLRFRSSCVRDGPHDWSSNEAMASVGEAVGERFRWGVSMSAFDCDVCTIVLRDCMACGLTLKLLHHK-----SGNRLPHEPRAYLQRGGRIAMLRPSTAHALLRAARVAPGATLLDPMGGIGTIAVEAALAVAGARCISSDTSVEATACARENAAACAGACVG------SVEVHQWDAAALQLPDASVTHVVTDMPFGRQYGSARANKQQVPRLLSEWRRVLKVGGRAVLLSTYS 1119
            YLLLC  GLE   A+AL  R     +    IP  +     S G A VGKL++ +    D             PC     II   AL+    G +  +KEA +++L         W A L      L        A    E T  FR+S VRDG H+++S EAM +VG  VG    W V++  +D +V  I+ RD +  GL+   L          ++LP E R +     R   LR STA  LL  A V+ G  LLD  GG+GTIA+EAA      R +S+D S    AC R  A   A   +G      SVEV     +           VV+++PFG       +N      LL+  +RV++ GGR VL++  S
Sbjct:   68 YLLLCTRGLEDQ-AEALLWRSLGREVPSWRIPPPQDLPRVSEGHAAVGKLVIGLKDDEDF------------PCGGIPGIIHIYALVDSARG-LSDDKEAAMKQLLT-------WTAGLGP---ELLTAVRLTPASTATEAT--FRASVVRDGEHNFTSEEAMPAVGGGVGMAMPWKVNLKTYDIEVTAIIHRDTVVLGLSCAQLGKSRRGATQPSKLPREQRPWHLSDARH--LRFSTARLLLELAEVSAGDRLLDLCGGMGTIALEAACCFPDLRAVSADVSQR--ACQRAEANVAAARSLGLLGLGSSVEVLVRGVSGWTRSSQEFDVVVSELPFGVSISILDSNV-----LLTAIQRVVRPGGRVVLIAPCS 408          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350716 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YM57_9STRA3.880e-294100.00Putative RNA methylase family UPF0020-domain-conta... [more]
A0A813GQB1_POLGL1.860e-3335.80Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A485LJ24_9STRA2.560e-3330.68Aste57867_20172 protein n=1 Tax=Aphanomyces stella... [more]
K3X044_GLOUD5.590e-3231.34UPF0020 domain-containing protein n=1 Tax=Globispo... [more]
A0A7C3B9X7_9CHLR1.370e-2836.60RNA methyltransferase n=1 Tax=Caldilineae bacteriu... [more]
A0A812MZ83_9DINO3.200e-2740.00Thumpd3 protein n=1 Tax=Symbiodinium sp. CCMP2592 ... [more]
A0A812MHK0_9DINO6.920e-2331.03Thumpd3 protein (Fragment) n=1 Tax=Symbiodinium sp... [more]
A0A7C6DLR0_9CHLR9.610e-2337.91Methyltransferase domain-containing protein n=1 Ta... [more]
A0A7S3SZ08_EMIHU4.360e-2234.02Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A1Q9EYT3_SYMMI3.240e-2132.71THUMP domain-containing protein 3 n=2 Tax=Symbiodi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_70contigContig_70:147293..151459 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350716|estExt_Genemark1.C_Ctg_700018
GOsGO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
Preferred nameTHUMPD3
DescriptiontRNA (guanine) methyltransferase activity
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0116@1|root,2QSE5@2759|Eukaryota
Evalue9.04e-37
Seed ortholog112098.XP_008607884.1
Hectar predicted targeting categoryother localisation
TranscriptId351038
TrackFilteredModels1
ProteinId350716
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350716gene_10858Tribonema minus UTEX_B_3156 geneContig_70 147293..151459 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350716Trimin1|350716|estExt_Genemark1.C_Ctg_700018Tribonema minus UTEX_B_3156 polypeptideContig_70 147293..151459 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10858_5exon_10858_5Tribonema minus UTEX_B_3156 exonContig_70 147293..147616 -
exon_10858_4exon_10858_4Tribonema minus UTEX_B_3156 exonContig_70 148416..148686 -
exon_10858_3exon_10858_3Tribonema minus UTEX_B_3156 exonContig_70 149739..149890 -
exon_10858_2exon_10858_2Tribonema minus UTEX_B_3156 exonContig_70 150681..151046 -
exon_10858_1exon_10858_1Tribonema minus UTEX_B_3156 exonContig_70 151319..151459 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10858CDS_10858Tribonema minus UTEX_B_3156 CDSContig_70 151319..151459 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10858 ID=mRNA_10858|Name=jgi.p|Trimin1|350716|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1254bp|location=Sequence derived from alignment at Contig_70:147293..151459- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGCAAACGGAGGCGGCGGTGCCTGGTGTGGACAGCTATCTGCTGCT
GTGCTGCGGAGGGCTAGAGCATGTCGTAGCGGACGCGTTGCGCGAAAGAC
TGCATGATCCAGGCATTAGCGTGGAGCCGATACCAAGGCAGGAACTCACA
AACAACCACAGCGGAGGCGCGGCGGGAGTCGGCAAGCTGCTGGTGTCTGT
CCCACATGCATCAGATAGCGCGGACGTGCGAGCAGCACTCCGTGGCGACA
CGGAGCCCTGCATCATAATCGGCCTCGCTCTGATACAACATCAAACTGGC
ACTGTCAAACCGGAAAAGGAGGCCGGCCTGCAAGAGCTGGGCGCCGCAGT
GGCGCAGTCGCAGCGGTGGGCAGCAGCGCTCAACCTCCTGGCGCGCCACT
TGCGCGATCAGGGGGAGGCCGCCGCGGCGCAGAGGATCGCTGAGGGGACC
CTGAGGTTCAGGTCGTCATGCGTGCGCGACGGGCCGCACGACTGGAGCAG
CAATGAGGCCATGGCCAGCGTGGGGGAGGCGGTGGGGGAGCGGTTCCGCT
GGGGCGTGAGCATGTCGGCCTTTGACTGCGACGTCTGCACCATCGTGCTG
CGCGACTGCATGGCGTGCGGCCTGACGCTCAAGCTGCTGCACCACAAGTC
GGGCAACAGGCTGCCGCACGAGCCGCGCGCCTACCTCCAACGCGGCGGCC
GCATCGCCATGCTGCGGCCGAGCACTGCGCACGCGCTGCTGCGCGCCGCG
CGCGTCGCCCCCGGCGCGACGCTGCTGGACCCCATGGGCGGCATAGGGAC
CATTGCGGTGGAGGCGGCGCTGGCAGTCGCGGGCGCGCGCTGCATAAGTT
CGGACACTAGCGTGGAGGCGACGGCGTGCGCTCGTGAGAATGCCGCCGCG
TGCGCCGGCGCGTGCGTCGGAAGCGTCGAGGTCCACCAGTGGGACGCGGC
GGCGCTGCAGCTGCCCGACGCGAGCGTCACGCACGTCGTGACGGACATGC
CCTTTGGGCGCCAGTACGGCAGCGCGCGGGCCAACAAGCAGCAGGTCCCG
CGCCTGCTGTCGGAGTGGCGCCGCGTGCTCAAGGTCGGCGGCCGCGCCGT
GCTGCTCTCAACGTACAGCCACGTGATTGTGGCGGCGGCGGCGGCAGTAG
ACGTTGCGCAGGGGGGGGAGGGGGCGCGGTGGCGCGTCGAGCAAGACCTG
CCTGTGAATATTGGCGGCGTGCCGGCGAGCGTCGTGGTGCTGGAGCGGTT
ATGA
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protein sequence of jgi.p|Trimin1|350716

>Trimin1|350716|estExt_Genemark1.C_Ctg_700018 ID=Trimin1|350716|estExt_Genemark1.C_Ctg_700018|Name=jgi.p|Trimin1|350716|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=418bp
MGQTEAAVPGVDSYLLLCCGGLEHVVADALRERLHDPGISVEPIPRQELT
NNHSGGAAGVGKLLVSVPHASDSADVRAALRGDTEPCIIIGLALIQHQTG
TVKPEKEAGLQELGAAVAQSQRWAAALNLLARHLRDQGEAAAAQRIAEGT
LRFRSSCVRDGPHDWSSNEAMASVGEAVGERFRWGVSMSAFDCDVCTIVL
RDCMACGLTLKLLHHKSGNRLPHEPRAYLQRGGRIAMLRPSTAHALLRAA
RVAPGATLLDPMGGIGTIAVEAALAVAGARCISSDTSVEATACARENAAA
CAGACVGSVEVHQWDAAALQLPDASVTHVVTDMPFGRQYGSARANKQQVP
RLLSEWRRVLKVGGRAVLLSTYSHVIVAAAAAVDVAQGGEGARWRVEQDL
PVNIGGVPASVVVLERL*
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mRNA from alignment at Contig_70:147293..151459-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10858 ID=mRNA_10858|Name=jgi.p|Trimin1|350716|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4167bp|location=Sequence derived from alignment at Contig_70:147293..151459- (Tribonema minus UTEX_B_3156 )
ATGGGGCAAACGGAGGCGGCGGTGCCTGGTGTGGACAGCTATCTGCTGCT GTGCTGCGGAGGGCTAGAGCATGTCGTAGCGGACGCGTTGCGCGAAAGAC TGCATGATCCAGGCATTAGCGTGGAGCCGATACCAAGGCAGGTATGCGTG AAACATATGCTCGCTATCTCGTGTTAGTGCTAGCAGATCTACTCACAGTA CACCAGAGCTGACGCAGCTGACATTGGACATTGGCCTTATTGACACAGGA TGGCATGACGACGGAAGCACAAATGTGAACAGTACACAACAACTAGCTTC AGCAACCTACAACAAGATTTGTCTTTATAGAGGTTGCGTGCTCCCGCACA ATGTCGTTTACGCAATCAACTTCACCAGCAAACCGCAGCTAGCTGGCCCG GTGACTCCTGCAGGAACTCACAAACAACCACAGCGGAGGCGCGGCGGGAG TCGGCAAGCTGCTGGTGTCTGTCCCACATGCATCAGATAGCGCGGACGTG CGAGCAGCACTCCGTGGCGACACGGAGCCCTGCATCATAATCGGCCTCGC TCTGATACAACATCAAACTGGCACTGTCAAACCGGAAAAGGAGGCCGGCC TGCAAGAGCTGGGCGCCGCAGTGGCGCAGTCGCAGCGGTGGGCAGCAGCG CTCAACCTCCTGGCGCGCCACTTGCGCGATCAGGGGGAGGCCGCCGCGGC GCAGAGGATCGCTGAGGGGACCCTGAGGTTCAGGTCGTCATGCGTGCGCG ACGGGCCGCACGACTGGAGCAGCAATGAGGTGAGCGCATGCAGTTCAACA GGTCTGATGAGAGCTGAGAGCTTTGCGTTTGGAGCTGTTGCCTTGGCCAC AGTCAGGAATTGTTAGGAGTTGCACTGTCGAGTAAGCGCATGCAGTTCCA CGGCCTGCCAGGGATGCTGCTTCGGAGCCGTTGCCTTGCACCTGTCAGCA TTCCGCTGTCGACTGCGCATACCTGGCTGATGATGTCATGAGTAATGAAA CTTACAGCGGTAATGGTGCAATTCTTTGCCGTGCACTTTATATCCACTTT TGTTCATTCATGTGGCTTCGGTGAACGCCATAGCATGCTCAGGGCACAAT ATCAGCGACATCAGACATGGCAGAATGAGACAAGGGTTGATTACTGTTAT GAGCGCTTGCAGCACACAGGTGCCTGCCCATGCTTGGCGCCCTTCATGCA GACTGAACCAGTGGGCAATCGAGGCCAGCGGCTGCTGCAGTCAGCGAGGC AGTGACTGTTGGCAATCACCGACTGTCACACCGCCGCACGCCAGTTACAA GCAAATGTGATAAGCACCCGTCACTCAAGCAGTAGATGTTCAGAGACTCT ACTTTCAAACACCACCTGCCTTCTCAACGCGCCGGCATACACCCATCTGA CACAACAGCACCTCCCACTGTGTTCCTGCAACATACAAACATCACATTGA CTCGTGGCCAATGACGCCAGCAGCGGCGACTACGGTTATTGATGGAAGGC ACTTGCAGCTAACCATCCTTTGTCACCTAGAGCTCTACGATCTTCTGATT CGTTTCCATCGACCGTCAGGCCATGGCCAGCGTGGGGGAGGCGGTGGGGG AGCGGTTCCGCTGGGGCGTGAGCATGTCGGCCTTTGACTGCGACGTCTGC ACCATCGTGCTGCGCGACTGCATGGCGTGCGGCCTGACGCTCAAGCTGCT GCACCACAAGTCGGGCAACAGGTGCGCGCACGCGTCCGTCTGAGCGCTGC CACAAGTACTCGTTGCCATGCCTCTAGATTGCGCCATGGCAGTACATGGC ACCACTTTGCGTGTCCTTACGCCTCTGAACACTCTTTTAACATCAACTCG AATCCGAACTGAATGTGAATGATGCGGCATGTACACCAACAGCGTGCCGG TGCGTCAATGGTGGCCACCTCTTGCCACACGCCCTTGCGCACTCCCTGGG CGTGTCAGGCATTGCTATACCGGCATGCTTTAGTTTGCGGCATCACGCGC AGTTGCGTGCTGATCACTGCTGCCTGCTGTCTTCGCCGCGACCCGCTCAC GCGCCCGCAGGCTTTCCGTCCTGTGTGTCTGAGCACTGCACCCCTTTCTT GCTGAGCGCTGCTGCTGTCTGCACCTCCTCGAGCGCTGCTGCTGCTGCCG CCGCTGCTGCTGTTGCTGCTGTCTGTCCCCCTCCGCCGCGCCACGTTGCC GTACGATGGCGACTCCGCCTCGCTGTATCACTGACGAGCGCTGTGCACTT CGAGACCGAGCAGCACCCCCCAGCCTTTGCGCAACAACAGAAACACAGTC TTACGATGCGCATCACCCTCTTTCCGCACCCCCGGCCCGCATGCAGGCTG CCGCATGCGCCGCGTGCATACCTCAAACGCGGCGCCCGCGGCGCCATGCT GCACTGCCAGTTACCTCCTCACAAAGCAAAACACAGTTTTATGATGAACA TTACTCTCTTTCCGTGCCTCCTTCAGCCCATGTATATTTTCAGGCTGCGG CACGAGCCGCGCACCTACCTCAGCCGCGGCGCCCGCGTCGCCATGCTGCA CTGCCATCAACCACCGCACAATACAAACCCAGTTTCACAATGAGCATCGC CCTCTTTCCGCACCCCCGGCCCGCATTCAGGCTGCCGCACGAGCCGCGCG CATACCTCAAATGCGGCGGCCGCATCGCCACGCTGCACCACCACCAACCA TCGCACAAACAACGCAAACGCAGTTTTTCACGATGAACATCAACCTCCTT CTGCACCCCTGCCCCATATTCAGGCTGCCGCACGAGCCGCGCGCCTACCT CCAACGCGGCGGCCGCATCGCCATGCTGCGGCCGAGCACTGCGCACGCGC TGCTGCGCGCCGCGCGCGTCGCCCCCGGCGCGACGCTGCTGGACCCCATG GGCGGCATAGGGACCATTGCGGTGGAGGCGGCGCTGGCAGTCGCGGGCGC GCGCTGCATAAGTTCGGACACTAGCGTGGAGGCGACGGCGTGCGCTCGTG AGAATGCCGCCGCGTGCGCCGGCGCGTGCGTCGGAAGCGTCGAGGTGCGT GTTGCTGCGAGCGCTGTGGGGGGGGGGGGGGGTCAATCCGTGTGCGCACT TGTTGCTGTCGTCTGTGGCCGTTCGCTGCGATGCGGGTGCTGTTGCATGA TCTCGAGCGCTGACACGCATGCTGAGCAACGCACACGTGTGTCGGCGTGC GGCAGGGCACTGCTGCAGTGCACGCGTGACCGCCGCCATTGATGCGAGCA GGCACCGTTGCCATACGCATGCGCAGCGCCACTCCCGCTGCATGCTACCC TCAGCGCGCATACATCACACTGCACTCACTGTGGTACATATTGCAAAGGT ACACGTTTTGCAGGCGGCGGTTCCGACTACGCCAGTTCTGGCAACGAACA CACGGACACGCCAACTTCAACTTGTGCATCCGTCCTGCTGTGCTCAGCAT ACATCCTTCACCGACCGCACTGCAAGTCATCCGAACCCTCTCTCCGTGGC GCAGCTCCACCAGTGGGACGCGGCAGCGCTGCAAATAGCGCTCTTCTGCT TGGCACTGTGATCTGGCGCGTGTGGTTGCATGATACAGCGTTCGTGGTTG CATGGTGTTGTGTACGCGCTGCTCGCCAGGGTCGCGGCGGCACCGCTGCT GCTGCATGACCCCGCAAATGGCCGAACGTGCGCTTCGGACGCCGCTCGGG GAGCAGCCAGCGCACGCACGATGATGCCAACTTAACCCATGCATCAGCTG CACGCTGCTGTGCCCAGCACACATCCCCCCCCCCCCCCCCCCCCCCAACC TCAATTCCCGTCATCCGATGCCCCTCTCTCCGTGGCGGCGCAGGTCCACC AGTGGGACGCGGCGGCGCTGCAGCTGCCCGACGCGAGCGTCACGCACGTC GTGACGGACATGCCCTTTGGGCGCCAGTACGGCAGCGCGCGGGCCAACAA GCAGCAGGTCCCGCGCCTGCTGTCGGAGTGGCGCCGCGTGCTCAAGGTCG GCGGCCGCGCCGTGCTGCTCTCAACGTACAGCCACGTGATTGTGGCGGCG GCGGCGGCAGTAGACGTTGCGCAGGGGGGGGAGGGGGCGCGGTGGCGCGT CGAGCAAGACCTGCCTGTGAATATTGGCGGCGTGCCGGCGAGCGTCGTGG TGCTGGAGCGGTTATGA
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Coding sequence (CDS) from alignment at Contig_70:147293..151459-

>mRNA_10858 ID=mRNA_10858|Name=jgi.p|Trimin1|350716|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1254bp|location=Sequence derived from alignment at Contig_70:147293..151459- (Tribonema minus UTEX_B_3156 )
ATGGGGCAAACGGAGGCGGCGGTGCCTGGTGTGGACAGCTATCTGCTGCT
GTGCTGCGGAGGGCTAGAGCATGTCGTAGCGGACGCGTTGCGCGAAAGAC
TGCATGATCCAGGCATTAGCGTGGAGCCGATACCAAGGCAGGAACTCACA
AACAACCACAGCGGAGGCGCGGCGGGAGTCGGCAAGCTGCTGGTGTCTGT
CCCACATGCATCAGATAGCGCGGACGTGCGAGCAGCACTCCGTGGCGACA
CGGAGCCCTGCATCATAATCGGCCTCGCTCTGATACAACATCAAACTGGC
ACTGTCAAACCGGAAAAGGAGGCCGGCCTGCAAGAGCTGGGCGCCGCAGT
GGCGCAGTCGCAGCGGTGGGCAGCAGCGCTCAACCTCCTGGCGCGCCACT
TGCGCGATCAGGGGGAGGCCGCCGCGGCGCAGAGGATCGCTGAGGGGACC
CTGAGGTTCAGGTCGTCATGCGTGCGCGACGGGCCGCACGACTGGAGCAG
CAATGAGGCCATGGCCAGCGTGGGGGAGGCGGTGGGGGAGCGGTTCCGCT
GGGGCGTGAGCATGTCGGCCTTTGACTGCGACGTCTGCACCATCGTGCTG
CGCGACTGCATGGCGTGCGGCCTGACGCTCAAGCTGCTGCACCACAAGTC
GGGCAACAGGCTGCCGCACGAGCCGCGCGCCTACCTCCAACGCGGCGGCC
GCATCGCCATGCTGCGGCCGAGCACTGCGCACGCGCTGCTGCGCGCCGCG
CGCGTCGCCCCCGGCGCGACGCTGCTGGACCCCATGGGCGGCATAGGGAC
CATTGCGGTGGAGGCGGCGCTGGCAGTCGCGGGCGCGCGCTGCATAAGTT
CGGACACTAGCGTGGAGGCGACGGCGTGCGCTCGTGAGAATGCCGCCGCG
TGCGCCGGCGCGTGCGTCGGAAGCGTCGAGGTCCACCAGTGGGACGCGGC
GGCGCTGCAGCTGCCCGACGCGAGCGTCACGCACGTCGTGACGGACATGC
CCTTTGGGCGCCAGTACGGCAGCGCGCGGGCCAACAAGCAGCAGGTCCCG
CGCCTGCTGTCGGAGTGGCGCCGCGTGCTCAAGGTCGGCGGCCGCGCCGT
GCTGCTCTCAACGTACAGCCACGTGATTGTGGCGGCGGCGGCGGCAGTAG
ACGTTGCGCAGGGGGGGGAGGGGGCGCGGTGGCGCGTCGAGCAAGACCTG
CCTGTGAATATTGGCGGCGTGCCGGCGAGCGTCGTGGTGCTGGAGCGGTT
ATGA
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