Trimin1|352226|estExt_Genemark1.C_Ctg_1130002 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352226
Unique NameTrimin1|352226|estExt_Genemark1.C_Ctg_1130002
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length276
Homology
BLAST of jgi.p|Trimin1|352226 vs. uniprot
Match: A0A835ZHW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHW1_9STRA)

HSP 1 Score: 427 bits (1098), Expect = 2.860e-149
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
Query:    1 MAATAAVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTILRWAVWRKRSSGFTTVVEACGPTTTTSTAVKLAETKECGGFYGSLAARCTEAEAAVVALVPSTAVVTPRAPVLALKAKAIWDELVRPSEVFAMYSHHLAIDVMAGGEEEFRGWRGYMEPPVRKLLDHFTYMRIPARDLHLGSATAAAAFDGAARGWRRXXXXXXXXXXXXXXXXEGELLEQEWEGEAEAADAARDFFVLEPVVPQWRRTALEAAGQAKRVRIQLLPPAPAQAAAR 275
            MAATAAVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTILRWAVWRKRSSGFTTVVEACGPTTTTSTAVKLAETKECGGFYGSLAARCTEAEAAVVALVPSTAVVTPRAPVLALKAKAIWDELVRPSEVFAMYSHHLAIDVMAGGEEEFRGWRGYMEPPVRKLLDHFTYMRIPARDLHLGSATAAAAFDGAARGWRRXXXXXXXXXXXXXXXXEGELLEQEWEGEAEAADAARDFFVLEPVVPQWRRTALEAAGQAKRVRIQLLPPAPAQAAAR
Sbjct:    1 MAATAAVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTILRWAVWRKRSSGFTTVVEACGPTTTTSTAVKLAETKECGGFYGSLAARCTEAEAAVVALVPSTAVVTPRAPVLALKAKAIWDELVRPSEVFAMYSHHLAIDVMAGGEEEFRGWRGYMEPPVRKLLDHFTYMRIPARDLHLGSATAAAAFDGAARGWRRXXXXXXXXXXXXXXXXEGELLEQEWEGEAEAADAARDFFVLEPVVPQWRRTALEAAGQAKRVRIQLLPPAPAQAAAR 275          
BLAST of jgi.p|Trimin1|352226 vs. uniprot
Match: A0A835ZG61_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG61_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.180e-36
Identity = 127/314 (40.45%), Postives = 133/314 (42.36%), Query Frame = 0
Query:  119 AIWDELVRPSEVFAMYSHHLAIDVMAGGEEEFRGWRGYMEPPVRKLLDHFTYMRIPARDLHL------------------------------------------------------------------------------------GSATAAAAFDGAARG-------------------------------------WRRXXXXXXXXXXXXXXXXEGELLEQEWEGE--------------------AEAADAA----------------RDFFVLEPVVPQWRRTALEAAGQAKRVRIQLLPPAPAQAAAR 275
            A WDELVRPSE FAMYSH+LAIDVMAGGEEEFRGWRGYME  VRKLLD+FTYMRIPARDLHL                                                                                    G   AA A   A R                                         XXXXXXXXXX      EG+LLEQEWEGE                    A+ +DAA                RDFFVLEPVVPQWRR ALEAAGQAKRVRIQLLPPAPAQAA+R
Sbjct:  345 ASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTYMRIPARDLHLYPRAFDRCCSGGVNGELPAHCVCFFVGFNVDRARLAAGRRLDVGHAFQKFEESATGVPWLKEGMCLALTAYSFKTLPAWTADELGGRDAARALRAALRAKDDATRKATLAXXXXXXLAQRPQLAXXXXXXXXXXXXXXXXXXXXXXXXXEAAVGGEGDLLEQEWEGEXXXXXXXXXXXXXXXXXXXYAKLSDAAKAEXXXXXXXXKRPATRDFFVLEPVVPQWRRAALEAAGQAKRVRIQLLPPAPAQAASR 658          
BLAST of jgi.p|Trimin1|352226 vs. uniprot
Match: A0A836CBM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM7_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.300e-20
Identity = 74/136 (54.41%), Postives = 75/136 (55.15%), Query Frame = 0
Query:  143 MAGGEEEFRGWRGYMEPPVRKLLDHFTYMRIPARDLHLGSATAAAAFDGAARGWRRXXXXXXXXXXXXXXXXEGELLEQEWEGEAEAADAA------------RDFFVLEPVVPQWRRTALEAAGQAKRVRIQLLP 266
            MAGGEEEFRGWRGYMEP                                          XXXXXXXXXXXX       +EWEGEAEAADAA            RDFFVLEPVVPQWRRTALEAAGQAKRVRIQLLP
Sbjct:    1 MAGGEEEFRGWRGYMEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXARASCWSREWEGEAEAADAAQGGSAARNCAPRRDFFVLEPVVPQWRRTALEAAGQAKRVRIQLLP 125          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352226 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZHW1_9STRA2.860e-149100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZG61_9STRA1.180e-3640.45Polynucleotide adenylyltransferase n=1 Tax=Tribone... [more]
A0A836CBM7_9STRA1.300e-2054.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_113contigContig_113:9697..11414 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352226mRNA_13158Tribonema minus UTEX_B_3156 mRNAContig_113 9526..11414 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352226|estExt_Genemark1.C_Ctg_1130002 ID=Trimin1|352226|estExt_Genemark1.C_Ctg_1130002|Name=jgi.p|Trimin1|352226|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=276bp
MAATAAVAPAAAAAAARAAAGKAVTTTVMSAVAAAAAATILRWAVWRKRS
SGFTTVVEACGPTTTTSTAVKLAETKECGGFYGSLAARCTEAEAAVVALV
PSTAVVTPRAPVLALKAKAIWDELVRPSEVFAMYSHHLAIDVMAGGEEEF
RGWRGYMEPPVRKLLDHFTYMRIPARDLHLGSATAAAAFDGAARGWRRRR
HCAAAAEAAAAGGGEGELLEQEWEGEAEAADAARDFFVLEPVVPQWRRTA
LEAAGQAKRVRIQLLPPAPAQAAAR*
back to top