Trimin1|350709|estExt_Genemark1.C_Ctg_690060 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350709
Unique NameTrimin1|350709|estExt_Genemark1.C_Ctg_690060
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length185
Homology
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BLAST of jgi.p|Trimin1|350709 vs. uniprot
Match: A0A835YN72_9STRA (GCK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN72_9STRA)

HSP 1 Score: 350 bits (898), Expect = 8.720e-122
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 
Query:    1 MLQARAASFALLSVLHASAAAAPASSEPPHPSSEVEHAAVETKQQDEEPEQKGEGGAAPKGEEDWCSPYPEEDYFVDENEPEEPTTCSLCIMMKNGPCPMTFRRWARCTEVAKERGEDDKVACRCANIFMDLYRCMNENPNYFMIEKDGQGNDTAEDAHAAESASDSPTEADAAAVAAAGVATA 184
            MLQARAASFALLSVLHASAAAAPASSEPPHPSSEVEHAAVETKQQDEEPEQKGEGGAAPKGEEDWCSPYPEEDYFVDENEPEEPTTCSLCIMMKNGPCPMTFRRWARCTEVAKERGEDDKVACRCANIFMDLYRCMNENPNYFMIEKDGQGNDTAEDAHAAESASDSPTEADAAAVAAAGVATA
Sbjct:    1 MLQARAASFALLSVLHASAAAAPASSEPPHPSSEVEHAAVETKQQDEEPEQKGEGGAAPKGEEDWCSPYPEEDYFVDENEPEEPTTCSLCIMMKNGPCPMTFRRWARCTEVAKERGEDDKVACRCANIFMDLYRCMNENPNYFMIEKDGQGNDTAEDAHAAESASDSPTEADAAAVAAAGVATA 184
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350709 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YN72_9STRA8.720e-122100.00GCK domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012891GCK domainSMARTSM01227GCK_2coord: 85..173
e-value: 1.2E-4
score: 26.1
IPR012891GCK domainPFAMPF07802GCKcoord: 86..143
e-value: 3.5E-11
score: 43.4
NoneNo IPR availableGENE3D1.10.287.2900coord: 70..146
e-value: 5.2E-7
score: 31.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..172
NoneNo IPR availablePANTHERPTHR34357F7A19.14 PROTEIN-RELATEDcoord: 22..172
NoneNo IPR availablePANTHERPTHR34357:SF2F7A19.14 PROTEIN-RELATEDcoord: 22..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_69contigContig_69:666207..669150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350709mRNA_12956Tribonema minus UTEX_B_3156 mRNAContig_69 666121..669443 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350709|estExt_Genemark1.C_Ctg_690060 ID=Trimin1|350709|estExt_Genemark1.C_Ctg_690060|Name=jgi.p|Trimin1|350709|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=185bp
MLQARAASFALLSVLHASAAAAPASSEPPHPSSEVEHAAVETKQQDEEPE
QKGEGGAAPKGEEDWCSPYPEEDYFVDENEPEEPTTCSLCIMMKNGPCPM
TFRRWARCTEVAKERGEDDKVACRCANIFMDLYRCMNENPNYFMIEKDGQ
GNDTAEDAHAAESASDSPTEADAAAVAAAGVATA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012891GCK_dom