Trimin1|350688|estExt_Genemark1.C_Ctg_690011 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|350688
Unique Name	Trimin1\|350688\|estExt_Genemark1.C_Ctg_690011
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	363

Homology

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BLAST of jgi.p|Trimin1|350688 vs. uniprot
Match: A0A835YN49_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN49_9STRA)

HSP 1 Score: 517 bits (1332), Expect = 4.760e-182
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0

Query:    1 MAHDIGAAEAAAPPPLKNPRLGEAEEPASMFTIGKDVTARIFGFLGARRFLFMGLTCKSARSIYVETFSAPDVSKATSLRLRDLCGFPVERRLAQQKALVKWAWESGLPKNGGLLVQAAADGDISLAEFLRSGKTRRTREPWTMQASEAAASAGHLAFLQWARDENGGGMEKWGRRVILXXXXXXXXXXXXXXHSQGCMAAGTDPVAAAIKGGHADVVDWFLAHDAKPTATFALLQWAVTTGCPTIAHTCAAAADCGQLGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAHAIVEFIDSVPAGEGEGEESAP 362
            MAHDIGAAEAAAPPPLKNPRLGEAEEPASMFTIGKDVTARIFGFLGARRFLFMGLTCKSARSIYVETFSAPDVSKATSLRLRDLCGFPVERRLAQQKALVKWAWESGLPKNGGLLVQAAADGDISLAEFLRSGKTRRTREPWTMQASEAAASAGHLAFLQWARDENGGGMEKWGRRVILXXXXXXXXXXXXXXHSQGCMAAGTDPVAAAIKGGHADVVDWFLAHDAKPTATFALLQWAVTTGCPTIAHTCAAAADCGQLGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAHAIVEFIDSVPAGEGEGEESAP
Sbjct:    1 MAHDIGAAEAAAPPPLKNPRLGEAEEPASMFTIGKDVTARIFGFLGARRFLFMGLTCKSARSIYVETFSAPDVSKATSLRLRDLCGFPVERRLAQQKALVKWAWESGLPKNGGLLVQAAADGDISLAEFLRSGKTRRTREPWTMQASEAAASAGHLAFLQWARDENGGGMEKWGRRVILXXXXXXXXXXXXXXHSQGCMAAGTDPVAAAIKGGHADVVDWFLAHDAKPTATFALLQWAVTTGCPTIAHTCAAAADCGQLGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAHAIVEFIDSVPAGEGEGEESAP 362

[Close]

BLAST of jgi.p|Trimin1|350688 vs. uniprot
Match: A0A836C8R1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8R1_9STRA)

HSP 1 Score: 208 bits (529), Expect = 1.470e-60
Identity = 244/402 (60.70%), Postives = 261/402 (64.93%), Query Frame = 0

Query:    1 MAHDIGAAEAAAPPPLKNPRLGEAEEPASMFTIGKDVTARIFGFLGARRFLFMGLTCKSARSIYVETFSAPDVSKATSLRLRDLCGFPVERRLAQQKALVKWAWESGLPKNGGLLVQAAADGDISLAEFLRSGKTRRTREPWTMQASEAAASAGHLAFLQWARDENGGGMEKWGRRVILXXXXXXXXXXXXXXHSQGCMAAGTD--------------------------------------PVAAAIKGGHADVVDWFLAHD--AKPTATFALLQWAVTTGCPTIAHTCAAAADCGQLGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAHAIVEFIDSVPAGEGEGEESAP 362
            MA D+GAA AA   PLK PRLG+A++PASM TIG  VT RIFGFLGA++FLFM LTCKS ++ Y ETFSAP                        QK  VKWAW+SGLPKNG LL Q AADGDISLAEFL SG+TRRTREPW MQASEAAA+ GHLAFLQWARD+   GMEK       XXXXXXXXXXXXXX                                                 P+   ++   A    W  +    A  +  FALLQWAVTTGCPT                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAHAIVEFIDSVPAGEGEGEESAP
Sbjct:    1 MAQDMGAAAAA---PLKAPRLGDADQPASMSTIG--VTVRIFGFLGAKKFLFMALTCKSTKATYDETFSAP-----------------------AQKVFVKWAWDSGLPKNGRLLAQTAADGDISLAEFLCSGETRRTREPWAMQASEAAATHGHLAFLQWARDD---GMEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLPLLQRLR--KAVYAPWNPSTTVAAVHSGNFALLQWAVTTGCPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAHAIVEFIDSVPAGEGEGEESAP 369

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350688 vs. uniprot

BLAST of jgi.p|Trimin1|350688 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YN49_9STRA	4.760e-182	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836C8R1_9STRA	1.470e-60	60.70	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 91..354 e-value: 3.2E-13 score: 51.0
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 114..324
None	No IPR available	PANTHER	PTHR46586:SF3	ANKYRIN REPEAT-CONTAINING PROTEIN	coord: 89..339
None	No IPR available	PANTHER	PTHR46586	ANKYRIN REPEAT-CONTAINING PROTEIN	coord: 89..339

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_69	contig	Contig_69:125771..127241 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350688	mRNA_12908	Tribonema minus UTEX_B_3156	mRNA	Contig_69 125771..127241 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|350688|estExt_Genemark1.C_Ctg_690011 ID=Trimin1|350688|estExt_Genemark1.C_Ctg_690011|Name=jgi.p|Trimin1|350688|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=363bp
MAHDIGAAEAAAPPPLKNPRLGEAEEPASMFTIGKDVTARIFGFLGARRF
LFMGLTCKSARSIYVETFSAPDVSKATSLRLRDLCGFPVERRLAQQKALV
KWAWESGLPKNGGLLVQAAADGDISLAEFLRSGKTRRTREPWTMQASEAA
ASAGHLAFLQWARDENGGGMEKWGRRVILNAAAQGHLALIEWAHSQGCMA
AGTDPVAAAIKGGHADVVDWFLAHDAKPTATFALLQWAVTTGCPTIAHTC
AAAADCGQLGMLQWLRAQGCAWDAITCSAAAKGGHLSVLQWARSRGCPWT
EYTCFQAARHGQLEVLRWVRANGAPWRRSECRRAAAEAKAHAIVEFIDSV
PAGEGEGEESAP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf