mRNA_12917 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|170085
Unique NamemRNA_12917
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A835YPD3_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPD3_9STRA)

HSP 1 Score: 572 bits (1475), Expect = 1.090e-206
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 1
Query:    1 MESNGDGNICGPNTLGLGGDFMPEVVPGLPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDMLPVPPVAV 828
            MESNGDGNICGPNTLGLGGDFMPEVVPGLPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDMLPVPPVAV
Sbjct:    1 MESNGDGNICGPNTLGLGGDFMPEVVPGLPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDMLPVPPVAV 276          
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A6H5JI30_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI30_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 3.100e-68
Identity = 114/248 (45.97%), Postives = 161/248 (64.92%), Query Frame = 1
Query:   61 FMPEVVPGLPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDM 804
            + P     L PMP RFL+AE  D  KA ARW  T++WR+  + D +L +PHP+F LIK  Y  CFHLPD +G + YYE PG  ++A LK  G+ + +L  HY YCMEFLW+ LQPR+  ++TIV D  G  V +++L GE+ +FLK++V M+S HYP RSFKI+ILNAPS  N  +  +K ++ + T+ KI ++P + +  E+L++IP E+LP  YGG   + LG SP E+++ AHV   L      M
Sbjct: 1351 YPPPSGSSLAPMPHRFLLAESMDVAKAWARWEATLDWRKETEADTILDRPHPKFALIKSKYAHCFHLPDKDGRVTYYERPGMSDIAELKRLGITKSELLDHYVYCMEFLWKVLQPRQSQRITIVIDLAG--VRFRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANVGDEMLKVIPSEHLPLHYGGAGEVALGSSPQELAMLAHVEKVLAENGQSM 1596          
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A7S3XQ11_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ11_HETAK)

HSP 1 Score: 177 bits (448), Expect = 9.420e-51
Identity = 96/273 (35.16%), Postives = 154/273 (56.41%), Query Frame = 1
Query:    4 ESNGDGNICGPNTLGLGGDFMPEVVPGLPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDMLPVPPV 822
            E  G    C  + LG  G     +  G   +P+ F+ AE G+   A  R+  T+ WR     D +L +PH +FD+ K  Y   F+  D  G++VY E  G++++  ++ +G+  +DL RHY Y ME+LW  L P + D++T V D EG+++  ++  GE  +F+KS + M S HYP R  K+ I+NAPS  ++ Y A+K +IP+ TR KIS++  S+   E++++I P+ +P +YGG+    +  SP E   RA V    ++T   + P  PV
Sbjct:    3 EGGGGEGFCLMDFLGAPGRVAAALGEG--DVPQLFVEAEFGNRAAALDRYRKTLLWRWEVGADRILDEPHLKFDIFKKCYPHSFYGRDREGNVVYIEQAGRVDVEGMRRHGLSLDDLLRHYMYNMEYLWGRLSPGKADRMTAVLDLEGVRL--RDFAGEVAAFVKSAIGMNSTHYPQRGHKVFIINAPSWFSMVYKAVKPLIPEVTRKKISILD-SRFYDEMVKVIDPDQIPQEYGGSGAHAMADSPFEQQYRAFVTAVAEKTGKTLEPFVPV 270          
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A7S2AKR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKR7_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.630e-47
Identity = 88/239 (36.82%), Postives = 134/239 (56.07%), Query Frame = 1
Query:   88 PPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDM 804
            PPMP RFL AE GD  KA  RW+ T  WR+    +  L +PHP F L+K+ Y   +H  D  G++VYYE PG +++  LK  G+  E    H  Y  EFLWR LQP E D++T V D  G+   +        S +K+ V    AHYP RS+KI++LN P+     +G +K ++    + KI++    ++ + +L+II  +N+P  YGG+    LG    E++L  HV+  +++ N ++
Sbjct:  127 PPMPTRFLNAEAGDEVKATQRWLDTCRWREEHGAEEALDKPHPDFALLKNCYPHFYHGRDREGNIVYYECPGGLDIDRLKTAGITCEKFVDHVMYQQEFLWRKLQPSEEDRVTAVIDLGGVNSMFI-FNKALISIVKACVVTTGAHYPERSYKILVLNVPNWFGTLFGFVKPLLNDVQKAKINIFRQHEVHSGMLKIIDDDNIPTAYGGSSPDELGNWEGELTLTTHVLETMRKANVEL 364          
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: G4YXA9_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YXA9_PHYSP)

HSP 1 Score: 172 bits (436), Expect = 1.580e-45
Identity = 88/223 (39.46%), Postives = 130/223 (58.30%), Query Frame = 1
Query:  103 RFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHV 771
            RF+  E+GD +K  AR+  T++WR+  D+DN+L  PHP F++IK +Y   FH    +GH VYYE PG++++ ALK  G+  +DL RHY Y  E+LWR ++P +  +   V D  G  +   +L GE   F+K   +   AHYP RS  I I+N P   N+ +  +K +I   TR+K+ ++  S +  EL  +I  EN+P  +GG     LG S  E +L AHV
Sbjct:  484 RFIAGEKGDVEKGRARYEATLQWRKENDIDNILVTPHPNFEIIKKYYPQYFHGKTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYMTEYLWRVVEPDDSGRSITVLDVTG--IGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDMENIPSDFGGGGAA-LGDSEEEHALAAHV 703          
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A0P1ALM7_PLAHL (Sec14 cytosolic n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ALM7_PLAHL)

HSP 1 Score: 171 bits (433), Expect = 2.270e-45
Identity = 86/223 (38.57%), Postives = 132/223 (59.19%), Query Frame = 1
Query:  103 RFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHV 771
            RF+  E+GD +K  AR++ T++WR+  ++DN+L  PHP F++IK  Y   FH    +GH VYYE PG++++ ALK  G+  +DL RHY Y  E+LWR ++P ++ +   V D  G  +   +L GE   F+K   +    HYP RS  I I+N P   N+ +  +K +I   TR+K+ ++  S +  EL  +I  EN+P  +GG  ++ LG S  E +L AHV
Sbjct:  416 RFIAGEKGDEEKGRARYLATLKWRKENNIDNILVTPHPNFEIIKRSYPQYFHGRTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDLGRSITVLDVSG--IGMYDLGGEVLDFIKRASAFTGEHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGGE-SVALGDSEEEHALAAHV 635          
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A8J5X530_DIALT (CRAL-TRIO domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X530_DIALT)

HSP 1 Score: 164 bits (414), Expect = 3.200e-45
Identity = 92/255 (36.08%), Postives = 140/255 (54.90%), Query Frame = 1
Query:   67 PEVVPGLPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMAT-ELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDMLPVPPVAV 828
            P   P  PP+P  FL AE   A++A ARW  T+ WR  + +D +LS+P+  F  +K  Y    HLPD  GH+ Y+E+PG++N+ ALK  GV+     RHY +  E+ W+   P+E  + T++FD  G    + +L  E    +K  V   + HYP+R+ +I++LN P+     +  LK I+      K+  + P Q+A  +L + I   NLP QYGG   + LG+S  E ++RA V    +R    + PV P+AV
Sbjct:   65 PGAAPDEPPVPANFLRAEP-TAERARARWQQTLRWRADERVDVILSEPNAVFYALKAHYPHYLHLPDKEGHLTYWELPGRLNLGALKKLGVDPSRGYRHYVWHTEYTWQLAAPKEGAQATVLFDAAGF--GWDQLSFELLELIKRIVYFTNQHYPHRAARIIVLNTPAWYGALHSMLKPIMSDVCETKLVFLSPQQVAAGDLTRWIDAANLPAQYGGKSRLQLGESRHEKAMRAFVDKANRRAG--VRPVQPLAV 314          
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A485K5A0_9STRA (Aste57867_436 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5A0_9STRA)

HSP 1 Score: 162 bits (409), Expect = 3.990e-45
Identity = 86/235 (36.60%), Postives = 127/235 (54.04%), Query Frame = 1
Query:   91 PMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTN 795
            P   RF+ AE+GD +K   RW  T +WR+  ++D +L +P P FD+IK  Y   FH    NGH VYYE  G ++   LK  G+  + L RHY +  EFLW+ L+P +  +   V D E     + +L G+  SF++  ++  +AHYP RS +I+++N P    + + A+  +I   T+ KI +   S    ELL  I  + LP  YGGT +  LG+S  E  L  HV + L   N
Sbjct:   27 PFSPRFIAAEKGDEEKGRHRWEATRQWRRENNIDGLLHEPQPHFDIIKKNYPQYFHGKSKNGHCVYYERLGYVDFKTLKKSGLNMDQLLRHYMFITEFLWKVLEPSDSGRSITVLDVENF--GFYDLTGDVTSFIRQAMAFAAAHYPERSAQIIVINVPGWFYMTWRAMSPMIDPVTKAKIRICNSSTSRDELLAAIDLDQLPSNYGGT-SCALGESDEEKRLAQHVQSYLSGNN 258          
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A6H5K979_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K979_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.660e-43
Identity = 89/229 (38.86%), Postives = 137/229 (59.83%), Query Frame = 1
Query:   94 MPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPR-EVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVI--PPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHV 771
            +P R+L    GD  +A  RW  T+EWR  + +D VL +P P F+LIK  Y    H    NG  V+ E+PG++++ A++  GV  E L+RHY +  E++W  L+P  E  +   V D +GL +  ++L GE   F+K   +++  HY  RS ++ I+NAPS  +L +  ++ ++ +RT+ KI +I     ++A  LL+ I PENLP QYGGTC + LG+S  E  LRA+V
Sbjct:  301 VPGRYLRGCAGDPVEAERRWRLTLEWRAKERIDEVLREPQPHFELIKRHYPHYIHRRARNGCPVWIELPGRIDLPAIRSAGVSPEALQRHYVFVTEYMWGVLEPDFENGQAVTVLDVQGLGM--RDLAGEALGFVKQATAIIQDHYVERSNRMFIVNAPSYFSLIWRVIRPMLNERTQAKIGIINTDAKKIAAALLECIAPENLPRQYGGTCPLDLGESEEETDLRAYV 527          
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A662WMZ0_9STRA (CRAL-TRIO domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMZ0_9STRA)

HSP 1 Score: 159 bits (402), Expect = 3.930e-43
Identity = 81/224 (36.16%), Postives = 123/224 (54.91%), Query Frame = 1
Query:   94 MPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPR----------EVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLG 735
            +PR FL+AE GD  KA  R+  T+ WR+    D++L+ P   +D IK  Y    H  D  GH +Y+E  G +N+  LK  G+ +EDL RHY + MEF  ++              +  KL IV D  G  +  +++ GE F F++    ++  HYP RSFKI  +N PS   + +  +K ++ + TR K +++  S+ A  LL+ I  ENLP +YGG+C+ P G
Sbjct:   63 IPRSFLVAENGDVAKATERYEATLAWRKETMADSILTMPQTHYDTIKTHYTQFLHKHDKLGHPLYFEKIGSINIGQLKKAGIAQEDLFRHYLFAMEFTLKYAAHELCQCDACATSDTQKLCIVLDARG--IGMRDMGGEAFEFIRKCTGVMQRHYPQRSFKIFFVNVPSWFGMAWKGVKPLLNEATRAKTNILTESETAAALLEFIDAENLPVEYGGSCSCPGG 284          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YPD3_9STRA1.090e-206100.00CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5JI30_9PHAE3.100e-6845.97CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S3XQ11_HETAK9.420e-5135.16Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2AKR7_9STRA1.630e-4736.82Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
G4YXA9_PHYSP1.580e-4539.46Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A0P1ALM7_PLAHL2.270e-4538.57Sec14 cytosolic n=1 Tax=Plasmopara halstedii TaxID... [more]
A0A8J5X530_DIALT3.200e-4536.08CRAL-TRIO domain-containing protein n=1 Tax=Diacro... [more]
A0A485K5A0_9STRA3.990e-4536.60Aste57867_436 protein n=1 Tax=Aphanomyces stellatu... [more]
A0A6H5K979_9PHAE1.660e-4338.86CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A662WMZ0_9STRA3.930e-4336.16CRAL-TRIO domain-containing protein (Fragment) n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_69contigContig_69:212048..215230 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|170085|e_gw1.69.54.1
DescriptionDomain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
COG categoryT
Max annot lvl121069|Pythiales
EggNOG OGsKOG1471@1|root,KOG1471@2759|Eukaryota,1MDQ7@121069|Pythiales
Evalue5.02e-47
Seed ortholog65071.PYU1_T011281
Hectar predicted targeting categoryother localisation
TranscriptId170407
TrackFilteredModels1
ProteinId170085
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170085gene_12917Tribonema minus UTEX_B_3156 geneContig_69 212048..215230 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170085Trimin1|170085|e_gw1.69.54.1Tribonema minus UTEX_B_3156 polypeptideContig_69 212048..215230 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12917_1exon_12917_1Tribonema minus UTEX_B_3156 exonContig_69 212048..212158 +
exon_12917_2exon_12917_2Tribonema minus UTEX_B_3156 exonContig_69 212703..212893 +
exon_12917_3exon_12917_3Tribonema minus UTEX_B_3156 exonContig_69 213581..213722 +
exon_12917_4exon_12917_4Tribonema minus UTEX_B_3156 exonContig_69 214163..214393 +
exon_12917_5exon_12917_5Tribonema minus UTEX_B_3156 exonContig_69 215075..215230 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12917CDS_12917Tribonema minus UTEX_B_3156 CDSContig_69 212048..212158 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12917 ID=mRNA_12917|Name=jgi.p|Trimin1|170085|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=831bp|location=Sequence derived from alignment at Contig_69:212048..215230+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGAGCAACGGCGACGGCAACATCTGCGGTCCCAACACCCTGGGCTT
GGGTGGCGATTTCATGCCGGAAGTGGTGCCTGGCCTGCCGCCAATGCCCC
GCCGGTTCCTGATTGCCGAAGAAGGTGATGCCAAGAAGGCAGCGGCGCGG
TGGGTCACGACGGTGGAATGGCGCCAATCCCAGGACATGGACAACGTATT
GTCACAGCCGCACCCGCAGTTCGACCTCATCAAGCACTTCTACAAGTTCT
GCTTCCACCTCCCCGACTGCAACGGGCACATGGTCTACTACGAGATGCCA
GGGCAGATGAACATGGCAGCGCTGAAAGACTACGGCGTGGAGCGTGAGGA
TCTGCGGAGGCACTACTGCTACTGCATGGAGTTCCTCTGGAGGTTTCTGC
AGCCAAGGGAGGTTGATAAGCTGACCATTGTATTTGATTGCGAGGGACTG
AAGGTCAATTATCAGGAACTGCGCGGCGAAACTTTTTCGTTCTTGAAGAG
CACCGTGTCGATGCTCAGCGCGCACTACCCCAACCGCAGCTTCAAGATCG
TCATCCTCAACGCGCCGTCAGCATTGAACTTATTTTATGGCGCCCTAAAG
TCCATCATCCCTCAGCGCACGCGCGACAAGATCAGCGTGATACCGCCGAG
CCAGATGGCCACGGAGCTGCTGCAGATCATACCCCCCGAGAACCTGCCGC
CGCAGTACGGTGGAACGTGCACCATACCCCTGGGCCAGTCGCCCGCAGAG
GTGTCTCTGCGAGCGCACGTCATGACAGAGCTGCAGCGCACCAATTCCGA
CATGCTGCCAGTGCCGCCCGTGGCAGTCTAA
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protein sequence of jgi.p|Trimin1|170085

>Trimin1|170085|e_gw1.69.54.1 ID=Trimin1|170085|e_gw1.69.54.1|Name=jgi.p|Trimin1|170085|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=277bp
MESNGDGNICGPNTLGLGGDFMPEVVPGLPPMPRRFLIAEEGDAKKAAAR
WVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMP
GQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGL
KVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALK
SIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAE
VSLRAHVMTELQRTNSDMLPVPPVAV*
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mRNA from alignment at Contig_69:212048..215230+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12917 ID=mRNA_12917|Name=jgi.p|Trimin1|170085|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3183bp|location=Sequence derived from alignment at Contig_69:212048..215230+ (Tribonema minus UTEX_B_3156 )
ATGGAGAGCAACGGCGACGGCAACATCTGCGGTCCCAACACCCTGGGCTT GGGTGGCGATTTCATGCCGGAAGTGGTGCCTGGCCTGCCGCCAATGCCCC GCCGGTTCCTGGTGAGTCGCACTGAGCAGCACTACTTCATCTTTGAAGTA GCTCCACGATGCTTCATGTCTACTGTAAAAGGTTTTTTAAAGTGAGATGC ACAGAATTACTTCAACCTTGCAGTCGCTACTTCCAAATACTTCCTGTCTG CCGTTGAAAGGGGTTTTGGGACATGACAGACAACTGCGTGCTGCACACGG TACGGTGCCTGAGTTGCCAACTCTGCCATGACCATCTTGCAGCCGTCGCT GGTTCACTATGCTACCACTTGGCCGTTTTCAGGTTGTTCATGCTTGGTTG ATGTTCTCATCGACTACAGTACTTCCAACACTGATTTTTTGTTGTGTTCA ACCGCCAGGGGCACCGCAAAGGCAGCAACTTGCTTGCTCTTTCAACACCG CTGTTGAAGTCTTACCCTGCAGACGCGCCTCTTTGCTGGTGCCACGCCAC CATGAACCGTACATTGCCGAAGAGGGCGTGACAGTGGAGAGTCAACTGCT TTCACTTTGTCTTGAAGCTTCAATTAGCAGGCGCCTCATTGCCTCTGCGC TACAGATTGCCGAAGAAGGTGATGCCAAGAAGGCAGCGGCGCGGTGGGTC ACGACGGTGGAATGGCGCCAATCCCAGGACATGGACAACGTATTGTCACA GCCGCACCCGCAGTTCGACCTCATCAAGCACTTCTACAAGTTCTGCTTCC ACCTCCCCGACTGCAACGGGCACATGGTCTACTACGAGATGCCAGGGTGC GCGTTCAAGAATGAAGTACATCTTTTGAAGTACAGTGCACTAGACTATGT ATTACTTCTGAAGCACAGTGTACTATGTACTTTATTTACTTCCGCCTGAG GGGCGGAAACCTTCCCTATGATCGCACCTTGTACAAATACTATGTACTCC TGAAGTAGAGTGTACATCTGAAGTCCATGTACTTTAAGATGTACTTCTGC CTTCGGGCCGGAAACTCAGCTGAAAGCAAGCGCTATCTGCCTTCAGCCAG GGCAACCACAGCTGGGCCTCGAAAAGGACTTGTCTGCCGTGGAAATATTC ATTGCTCATAAACAACTACAGTATTATGCATGTATACTGCAAGTGAAAAC GCCATGGTGGCGCACATGCAACTGCAGCCACGCTGGGGTACACGCCACCA AGTAATGATGCCTCTGCAGGGCACACTAGATGCGCGTGACTGATACGATG CTGCACATTTTCAGAATGCAATAACCAGCTGTACAGCACGCTTGTAAGAT GAGCAGCACCGCTCAGCATGCCCAGCTCCTTAGCTGCGCAGTACGTCCGC TGAGACAACAGCCGCCGACACACGGAAACGGTGACCGTTTGTCGTCAATG AGATCAGGACTAACCAGCGCTACTCTTCTGCCAGTTTGCCAGTTGTTTAC AACAAATGCATCTGGCTTCTTGCGCATCTGCAGGCAGATGAACATGGCAG CGCTGAAAGACTACGGCGTGGAGCGTGAGGATCTGCGGAGGCACTACTGC TACTGCATGGAGTTCCTCTGGAGGTTTCTGCAGCCAAGGGAGGTTGATAA GCTGACCATTGTATTTGATTGCGAGGTCAGTGCCCCACCTGTAAACATTG CAATTGCAATCCTCTCTTGCTGTCGCTGGCGCTCTACTTGTGAATGCCTG CAATTTCTGCAGGTAACGTGTTGCAAGCTGTGTGCTGCCAAGCACTTGTG CCAAGCGGGTCTTGGGGACAAATTGCACAGCAGGCATTGGCCCCTGAGTA TCACAGGCATGCAGAGGTGGGTGTGGAGGGTGAGGTTTAGGGTTAGTAGT CATAGAGTTGCCCTCAGACCCTTACAAGTTGCCTGACCTACTCATGTCAA ATGCTCTCAAAGTACTTCAGACACGACATGACACATTTTCACCCCTGCCA GCTGTCGTATCAGTGCCAAATGCCTGCCAGCTGTCATATCAGCACCGAGC ACGGAAGCTGGTTTCAACACTTCCACTTCAACTCATCAGCGCTTCGGTGA TGCTCCTTGCCACAGGGACTGAAGGTCAATTATCAGGAACTGCGCGGCGA AACTTTTTCGTTCTTGAAGAGCACCGTGTCGATGCTCAGCGCGCACTACC CCAACCGCAGCTTCAAGATCGTCATCCTCAACGCGCCGTCAGCATTGAAC TTATTTTATGGCGCCCTAAAGTCCATCATCCCTCAGCGCACGCGCGACAA GATCAGCGTGATACCGCCGAGCCAGATGGCCACGGAGCTGCTGCAGGTGG GACGAGGGTGTTTCGTAACCGCTTTATAACTGCTCGTTTGAGTGACATGT GTGCTGTGCTTCATCATGGTATGGTGGGGTGTGTGATTTGTTATGCTTTA TGAATGCGCCTTTGTTTGATGTGAGCTGTGCTTTCAAAAAACTGCACTTG CGAGTGGGATGTGTGCTGTGCGTCTCTGACCTCGTGAAGCCATTGCGCCA TTCAAAGTTCATGCCCCGCATGAAGAGGTCCCTTCTTGCTTGCTAGGACA CGGCAGGTACAACAGTCGCGACATTGGCTCAGAGCATTGTGGTATGTCTG CTGCGCACCAAATGTCCATGCGGTTGGCACTACGTTTCGCTTTGGTCACC ATGGTCAACATGTGCATGTTCCAAGCATGCAGGTTGAGGCTCTGCACCAG AAGTCCAGTACCGTTCTCAAGTACTTGACCTGGGGCTGTTGTTTCATGAC AATCAGACATTGCCATCATGATTGTCGTCAAACGATCAGAGCTATTGTAC GCCATCACAAATTCAGCAAGACTGTGTTGAGTGTCCATGCGAGGCAAGGC CATTAAAGCCCACGAGGAGCTTACCTGATGTGCTTCTGACCACTTTGGTG GCAGGCTGCTGGCGTGTAAAGAGGGCCGTTGTCTCACATGGAAACTTACG CAAACTTCCTGCGTGCCTTGCGTGCAGATCATACCCCCCGAGAACCTGCC GCCGCAGTACGGTGGAACGTGCACCATACCCCTGGGCCAGTCGCCCGCAG AGGTGTCTCTGCGAGCGCACGTCATGACAGAGCTGCAGCGCACCAATTCC GACATGCTGCCAGTGCCGCCCGTGGCAGTCTAA
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Coding sequence (CDS) from alignment at Contig_69:212048..215230+

>mRNA_12917 ID=mRNA_12917|Name=jgi.p|Trimin1|170085|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=831bp|location=Sequence derived from alignment at Contig_69:212048..215230+ (Tribonema minus UTEX_B_3156 )
ATGGAGAGCAACGGCGACGGCAACATCTGCGGTCCCAACACCCTGGGCTT
GGGTGGCGATTTCATGCCGGAAGTGGTGCCTGGCCTGCCGCCAATGCCCC
GCCGGTTCCTGATTGCCGAAGAAGGTGATGCCAAGAAGGCAGCGGCGCGG
TGGGTCACGACGGTGGAATGGCGCCAATCCCAGGACATGGACAACGTATT
GTCACAGCCGCACCCGCAGTTCGACCTCATCAAGCACTTCTACAAGTTCT
GCTTCCACCTCCCCGACTGCAACGGGCACATGGTCTACTACGAGATGCCA
GGGCAGATGAACATGGCAGCGCTGAAAGACTACGGCGTGGAGCGTGAGGA
TCTGCGGAGGCACTACTGCTACTGCATGGAGTTCCTCTGGAGGTTTCTGC
AGCCAAGGGAGGTTGATAAGCTGACCATTGTATTTGATTGCGAGGGACTG
AAGGTCAATTATCAGGAACTGCGCGGCGAAACTTTTTCGTTCTTGAAGAG
CACCGTGTCGATGCTCAGCGCGCACTACCCCAACCGCAGCTTCAAGATCG
TCATCCTCAACGCGCCGTCAGCATTGAACTTATTTTATGGCGCCCTAAAG
TCCATCATCCCTCAGCGCACGCGCGACAAGATCAGCGTGATACCGCCGAG
CCAGATGGCCACGGAGCTGCTGCAGATCATACCCCCCGAGAACCTGCCGC
CGCAGTACGGTGGAACGTGCACCATACCCCTGGGCCAGTCGCCCGCAGAG
GTGTCTCTGCGAGCGCACGTCATGACAGAGCTGCAGCGCACCAATTCCGA
CATGCTGCCAGTGCCGCCCGTGGCAGTCTAA
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