Trimin1|350677|estExt_Genemark1.C_Ctg_680094 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350677
Unique NameTrimin1|350677|estExt_Genemark1.C_Ctg_680094
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length290
Homology
BLAST of jgi.p|Trimin1|350677 vs. uniprot
Match: A0A835YV56_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV56_9STRA)

HSP 1 Score: 493 bits (1270), Expect = 5.250e-175
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query:    1 MSTTYLVVEARGARQLKKVQLIGTQDPYLKLWAGSGGDVLRTKVHTDGGSSAVWNQRFVFDVGAVMGDFIYFEVADKNIMSSASIGCGKWPIASVPANATLDQWHEIYDAKGRSAGAVHLVMKLDGNVSPAATAAAAPAGTDGIGSGMRFASSQTAALPTPAQRSQQRSQQQHQDGGATPFKPYYDLQGRWISGPEPQQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHPSAASRTAWAEARYTSAGNLNGGEQPSPLPQPSPLPPGWEEQTDPKGRK 289
            MSTTYLVVEARGARQLKKVQLIGTQDPYLKLWAGSGGDVLRTKVHTDGGSSAVWNQRFVFDVGAVMGDFIYFEVADKNIMSSASIGCGKWPIASVPANATLDQWHEIYDAKGRSAGAVHLVMKLDGNVSPAATAAAAPAGTDGIGSGMRFASSQTAALPTPAQRSQQRSQQQHQDGGATPFKPYYDLQGRWISGPEPQQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHPSAASRTAWAEARYTSAGNLNGGEQPSPLPQPSPLPPGWEEQTDPKGRK
Sbjct:    1 MSTTYLVVEARGARQLKKVQLIGTQDPYLKLWAGSGGDVLRTKVHTDGGSSAVWNQRFVFDVGAVMGDFIYFEVADKNIMSSASIGCGKWPIASVPANATLDQWHEIYDAKGRSAGAVHLVMKLDGNVSPAATAAAAPAGTDGIGSGMRFASSQTAALPTPAQRSQQRSQQQHQDGGATPFKPYYDLQGRWISGPEPQQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHPSAASRTAWAEARYTSAGNLNGGEQPSPLPQPSPLPPGWEEQTDPKGRK 289          
BLAST of jgi.p|Trimin1|350677 vs. uniprot
Match: D7G0H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H2_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 4.790e-24
Identity = 70/176 (39.77%), Postives = 93/176 (52.84%), Query Frame = 0
Query:    6 LVVEARGARQLKKVQLIGTQDPYLKLWAGSGGDVLRTKVHTDGGSSAVWNQRFVFDVGAVMGD-FIYFEVADKNIMSSASIGCGKWPIASVPANATLDQWHEIYDAKGRSAGAVHLVMKLDGNVSPAATAAAAPAGTDGIGSGMRFASSQTAALPTPAQRSQQRSQQQHQDGGATP 180
            L + A+ A+ LK VQ+IG QDPYLKLW G  G  ++TKVH DGG  A WN+ FVFD+  V  +   +FE  +KN+  S +IG GK+P+      A    WH+IY+ KG+ AG V L  ++D     +   A     T G+G        Q +A P P Q S    Q  H   G  P
Sbjct:   10 LYIVAKEAKGLKNVQMIGRQDPYLKLWVGRAGTKVKTKVHEDGGKVATWNETFVFDLQNVDAEECFHFEAKNKNVTDSKTIGMGKFPLKHFGPVAQAT-WHKIYNIKGKPAGEVLLEGRMDDRHGMSTHGAPMVGSTPGLG--------QPSASPIPPQSSMHYPQ--HPSAGGYP 174          
BLAST of jgi.p|Trimin1|350677 vs. uniprot
Match: A0A6H5L027_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L027_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.010e-22
Identity = 64/146 (43.84%), Postives = 84/146 (57.53%), Query Frame = 0
Query:    3 TTYLVVEARGARQLKKVQLIGTQDPYLKLWAGSGGDVLRTKVHTDGGSSAVWNQRFVFDVGAVMGD-FIYFEVADKNIMSSASIGCGKWPIA--SVPANATLDQWHEIYDAKGRSAGAVHLVMKLDGNVSPAATAAAAPAGTDGIG 145
            T Y+V  A+ AR LK VQLIG QDPYLKLWAG  G  ++TKVH DGG  A WN+ F FD+  V  + +++FE  +KN+  S +IG GK  +      A AT   WH+IY   G+ AG V L  ++D     +   A     T G+G
Sbjct:    9 TLYIV--AKEARGLKNVQLIGRQDPYLKLWAGRAGTKVKTKVHEDGGKVATWNETFAFDLQNVGAEEYLFFEAKNKNVTDSKTIGMGKISLKYFGPVAQAT---WHKIYSINGKVAGEVLLEGRMDDRHGMSTHGAPMVGSTPGLG 149          
BLAST of jgi.p|Trimin1|350677 vs. uniprot
Match: A0A0B7N748_9FUNG (C2 domain-containing protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7N748_9FUNG)

HSP 1 Score: 66.2 bits (160), Expect = 1.020e-8
Identity = 46/128 (35.94%), Postives = 62/128 (48.44%), Query Frame = 0
Query:    4 TYLVVEARGARQLKKVQLIGTQDPYLKL---WAGSGGDVLRTKVHTDGGSSAVWNQRFVFDVGAVMGDFIYFEVADKNIMSSASIGCGKWPIAS-VPANAT-LDQWHEIYDAKGRSAGAVHLVMKLDG 126
            T L + A  A +L+KVQ IG QDP+L+    +    G  L+T  H DGG  A WNQ F  ++     + +Y E+ DK       IG    PI   V AN + L+    ++D K   AG VHL     G
Sbjct:   50 TSLTINAVSAYELRKVQRIGKQDPFLQFSLDFTNKEG-FLKTFTHKDGGEKATWNQSFTIELNGE--ENLYVEILDKEKTFDEVIGFAAIPINQIVHANGSYLNGLFTVFDTKREKAGTVHLQFSTTG 174          
BLAST of jgi.p|Trimin1|350677 vs. uniprot
Match: A0A433PL65_9FUNG (C2 domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PL65_9FUNG)

HSP 1 Score: 64.7 bits (156), Expect = 3.630e-8
Identity = 44/138 (31.88%), Postives = 65/138 (47.10%), Query Frame = 0
Query:    8 VEARGARQLKKVQLIGTQDPYLKLWAGSGGDVLRTKVHTDGGSSAVWNQRFVFDVGAVMGDFIYFEVADKNIMSSASIGCGKWPIASVPANATLDQWHEIYDAKGRSAGAVHLVMKLDGNVSPAATAAAAPAGTDGIG 145
            V A  AR LK+  +    DP++  +        RT+ H DGGS   WNQ    D+     + ++ EV D++  SS  IG    P+  V  +   D W  I    G+SAG +HL++K+ G   P    +  P G+  IG
Sbjct:    8 VTAVSARGLKETGMFDKMDPFVGFYVDPA-HKHRTRSHVDGGSDPQWNQTISVDLQDSH-NTLFVEVFDEDPRSSDLIGGVALPLDQVFRSGFQDSWIPIQRPNGKSAGEIHLILKVAGQGVPTGYQSPHPPGSQTIG 143          
BLAST of jgi.p|Trimin1|350677 vs. uniprot
Match: A0A1Y1Z6K8_9FUNG (C2 domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z6K8_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 1.800e-7
Identity = 42/115 (36.52%), Postives = 57/115 (49.57%), Query Frame = 0
Query:    6 LVVEARGARQLKKVQLIGTQDPYLKLWAGSGGDVLRTKVHTDGGSSAVWNQRFVFDVGAVMGDFIYFEVADKNIMSSASIGCGKWPIASVPANATLDQWHEIYDAKGRSAGAVHL 120
            L V     R LK VQ IG QDP+L++  G+     RTK   +GG    WN+R  FDV   +   I  +  D+N+   A IG G+           LD+W E+ D +G  AG V+L
Sbjct:   13 LEVRPCKGRDLKVVQKIGKQDPFLQIEIGNKRQ--RTKADRNGGQKPTWNERLSFDVTEGVHRVIV-KCFDQNLREHAFIGEGEIDFGPALTYYQLDKWFELND-RGVPAGEVYL 123          
BLAST of jgi.p|Trimin1|350677 vs. uniprot
Match: A0A1Y2HXF2_9FUNG (C2 domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HXF2_9FUNG)

HSP 1 Score: 57.8 bits (138), Expect = 3.530e-6
Identity = 46/128 (35.94%), Postives = 64/128 (50.00%), Query Frame = 0
Query:    6 LVVEARGARQLKKV-QLIGTQDPYLKLWAGSGGDVLRTKVHTDGGSSAVWNQRFVFDVGA---VMGDFIYFEVADKNIMSSAS-IGCGKWPIASV-PANATLDQWHEIYDAKG--RSAGAVHLVMKLD 125
            L V    AR L     LIG+QDPYLKL  GS    L++ VH +GG+ A WN    F + A   +    ++    DK+ +SS   IG G+  +  V  A    D W E+   +G  R AG VHL ++ +
Sbjct:    5 LTVHCVAARNLYDAGDLIGSQDPYLKLTLGS--TKLKSSVHKNGGTQAQWNDTLTFSIPADPALAPTTLHVACWDKDTISSDDLIGEGQVNLPQVLAATGAFDGWIELSRGEGGKRVAGQVHLQIQYE 130          
BLAST of jgi.p|Trimin1|350677 vs. uniprot
Match: A0A067C421_SAPPC (C2 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C421_SAPPC)

HSP 1 Score: 52.8 bits (125), Expect = 2.950e-5
Identity = 37/105 (35.24%), Postives = 53/105 (50.48%), Query Frame = 0
Query:    6 LVVEARGARQLKKVQLIGTQDPYLKLWAGSGGDVLRTKVHTDGGSSAVWNQRFVFDVGAVMGDFIYFEVADKN---IMSSASIGCGKWPI-ASVPANATLDQWHE 106
            L++  R AR LK+ QL+G QDPY  +   +  D   T+VH  GGS+  WN  F+  V   +   +   V  KN   ++   SIG  +  + A   A AT D +HE
Sbjct:    3 LILTLREARNLKRTQLLGAQDPYCNVSIPNIFDAT-TEVHHHGGSNPWWNASFLLSVPETIPSGLTLAVHIKNAMHVLPDRSIGMARVDLDALATALATDDIYHE 106          
BLAST of jgi.p|Trimin1|350677 vs. uniprot
Match: A0A1Y1XRE5_9FUNG (C2 domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XRE5_9FUNG)

HSP 1 Score: 53.1 bits (126), Expect = 7.690e-5
Identity = 37/107 (34.58%), Postives = 53/107 (49.53%), Query Frame = 0
Query:   14 RQLKKVQLIGTQDPYLKLWAGSGGDVLRTKVHTDGGSSAVWNQRFVFDVGAVMGDFIYFEVADKNIMSSASIGCGKWPIASVPANATLDQWHEIYDAKGRSAGAVHL 120
            R L+ VQ IG QDP+L+   G+     RTK   +GG    WN+R  F+V   +   +  +  D+N+   A IG  +   +       LD W E+ D KG  AG V+L
Sbjct:   21 RDLRVVQKIGKQDPFLQFELGNTRK--RTKADKNGGQKPTWNERISFEVPEGVHK-VAVKCYDQNLREHAFIGEREIDFSPAITYYQLDNWFELKD-KGDPAGEVYL 123          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350677 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A835YV56_9STRA5.250e-175100.00C2 domain-containing protein n=1 Tax=Tribonema min... [more]
D7G0H2_ECTSI4.790e-2439.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L027_9PHAE1.010e-2243.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0B7N748_9FUNG1.020e-835.94C2 domain-containing protein n=1 Tax=Parasitella p... [more]
A0A433PL65_9FUNG3.630e-831.88C2 domain-containing protein n=1 Tax=Endogone sp. ... [more]
A0A1Y1Z6K8_9FUNG1.800e-736.52C2 domain-containing protein n=1 Tax=Basidiobolus ... [more]
A0A1Y2HXF2_9FUNG3.530e-635.94C2 domain-containing protein n=1 Tax=Catenaria ang... [more]
A0A067C421_SAPPC2.950e-535.24C2 domain-containing protein n=1 Tax=Saprolegnia p... [more]
A0A1Y1XRE5_9FUNG7.690e-534.58C2 domain-containing protein n=1 Tax=Basidiobolus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 5..104
e-value: 5.8E-10
score: 49.1
IPR000008C2 domainPFAMPF00168C2coord: 5..106
e-value: 4.0E-11
score: 43.1
IPR000008C2 domainPROSITEPS50004C2coord: 1..105
score: 13.929934
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 1..129
e-value: 1.0E-16
score: 63.2
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 3..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..289
NoneNo IPR availablePANTHERPTHR47052CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790)coord: 5..283
NoneNo IPR availablePANTHERPTHR47052:SF3CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790)coord: 5..283
NoneNo IPR availableCDDcd00030C2coord: 6..107
e-value: 5.11265E-13
score: 62.0843

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_68contigContig_68:635526..637927 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350677mRNA_8535Tribonema minus UTEX_B_3156 mRNAContig_68 635526..638098 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350677|estExt_Genemark1.C_Ctg_680094 ID=Trimin1|350677|estExt_Genemark1.C_Ctg_680094|Name=jgi.p|Trimin1|350677|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=290bp
MSTTYLVVEARGARQLKKVQLIGTQDPYLKLWAGSGGDVLRTKVHTDGGS
SAVWNQRFVFDVGAVMGDFIYFEVADKNIMSSASIGCGKWPIASVPANAT
LDQWHEIYDAKGRSAGAVHLVMKLDGNVSPAATAAAAPAGTDGIGSGMRF
ASSQTAALPTPAQRSQQRSQQQHQDGGATPFKPYYDLQGRWISGPEPQQQ
QQHQQQQQQQPLQQHLQQQLLQQLPQQQQQEPQHQLQQQHPSAASRTAWA
EARYTSAGNLNGGEQPSPLPQPSPLPPGWEEQTDPKGRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf