mRNA_8532 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350674 vs. uniprot
Match: A0A835YLH4_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLH4_9STRA) HSP 1 Score: 756 bits (1953), Expect = 3.220e-271 Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 1
Query: 1 MIFRTQNFPHAQTQAAVLLYYKYVDLGEKSREECRAWYQEVCSKANLCGRVRVALDGVNCTLGGCEAALQHHITQVKAHPVLRGADIDFKLSPSPGALNAAARRESGFDQLSVKAVKEVRTRAHFNSVNVLLYDPAHTLALCVVSLGAQVPAELSARHVSPQEFHAMLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVMLLDARNGYESDIGRFGARGVPLLAPRTRQFSDLPRWIDAHLAELEGRTVLMYCTGGVRCERASAYLRAKGPAFADVVQLSGGIERYLQAFPDGGFFAGKNFVFDERVSVAPAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRESSXXXADSTTASARSDSASCAVXXXXXXXXXXXXXXXXXXXXXAVVGRCALCTAAWDDYGARARCERCRVLMLVCPACQXXXXXXXXXXXXXXXXXXXXXXXXXVGGSGCAAQQLLCDACTSRGEETAMSHWRRRQRNQGQPPKSEADACQAIAVA 1545
MIFRTQNFPHAQTQAAVLLYYKYVDLGEKSREECRAWYQEVCSKANLCGRVRVALDGVNCTLGGCEAALQHHITQVKAHPVLRGADIDFKLSPSPGALNAAARRESGFDQLSVKAVKEVRTRAHFNSVNVLLYDPAHTLALCVVSLGAQVPAELSARHVSPQEFHAMLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVMLLDARNGYESDIGRFGARGVPLLAPRTRQFSDLPRWIDAHLAELEGRTVLMYCTGGVRCERASAYLRAKGPAFADVVQLSGGIERYLQAFPDGGFFAGKNFVFDERVSVAPAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRESSXXXADSTTASARSDSASCAVXXXXXXXXXXXXXXXXXXXXXAVVGRCALCTAAWDDYGARARCERCRVLMLVCPACQXXXXXXXXXXXXXXXXXXXXXXXXXVGGSGCAAQQLLCDACTSRGEETAMSHWRRRQRNQGQPPKSEADACQAIAVA
Sbjct: 1 MIFRTQNFPHAQTQAAVLLYYKYVDLGEKSREECRAWYQEVCSKANLCGRVRVALDGVNCTLGGCEAALQHHITQVKAHPVLRGADIDFKLSPSPGALNAAARRESGFDQLSVKAVKEVRTRAHFNSVNVLLYDPAHTLALCVVSLGAQVPAELSARHVSPQEFHAMLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVMLLDARNGYESDIGRFGARGVPLLAPRTRQFSDLPRWIDAHLAELEGRTVLMYCTGGVRCERASAYLRAKGPAFADVVQLSGGIERYLQAFPDGGFFAGKNFVFDERVSVAPAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRESSXXXADSTTASARSDSASCAVXXXXXXXXXXXXXXXXXXXXXAVVGRCALCTAAWDDYGARARCERCRVLMLVCPACQXXXXXXXXXXXXXXXXXXXXXXXXXVGGSGCAAQQLLCDACTSRGEETAMSHWRRRQRNQGQPPKSEADACQAIAVA 515
BLAST of jgi.p|Trimin1|350674 vs. uniprot
Match: A0A7S1X6D0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X6D0_9CHLO) HSP 1 Score: 245 bits (626), Expect = 4.690e-73 Identity = 138/308 (44.81%), Postives = 171/308 (55.52%), Query Frame = 1
Query: 49 VLLYYKYVDLGEKSREECRAWYQEVCSKANLCGRVRVALDGVNCTLGGCEAALQHHITQVKAHPVLRGADIDFKLSPSPGALNAAARRESGFDQLSVKAVKEVRTRAHFNSVNVLLYDPAHTLALCVVSLGAQVPAELSARHVSPQEFHAMLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVMLLDARNGYESDIGRFGARGVPLLAPRTRQFSDLPRWIDAHLAELEGRTVLMYCTGGVRCERASAYLRAKGPAFADVVQLSGGIERYLQAFPDGGFFAGKNFVFDERVSVAPA 972
VLLYYKYV L E RE +W + +C L GRVRVALDG+N TLGG A LQ HI V+AHP++ G DIDFKL+ S GA+N A E+GF L V TRA ++ L A + AE H SP +F L + +L+D RN YES IGRF G+ + P+ RQFSD P W+D ++ L G+TV+MYCTGGVRCERASAYL KG F +V+QL GGI+RYL+AFPDGGFF GKNFVFD+R+++A A
Sbjct: 7 VLLYYKYVTLSENEREAVASWLETLCKDLALVGRVRVALDGINVTLGGNTAQLQEHIAAVQAHPLVGGPDIDFKLAISSGAINEQASHETGFKDL------RVLTRAELVTLG---------------PLAAGIRAEQGGTHYSPYDFQDTLLERQSTGAAA-------------------------------NTVLIDTRNCYESRIGRFDVEGIAVEVPQIRQFSDFPAWVDDNVERLRGKTVMMYCTGGVRCERASAYLIKKGAEFENVIQLEGGIQRYLEAFPDGGFFKGKNFVFDDRLAIAGA 262
BLAST of jgi.p|Trimin1|350674 vs. uniprot
Match: A0A5B8MK37_9CHLO (Rhodanese-like domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MK37_9CHLO) HSP 1 Score: 240 bits (613), Expect = 6.370e-69 Identity = 155/428 (36.21%), Postives = 197/428 (46.03%), Query Frame = 1
Query: 49 VLLYYKYVDLGEKS---REECRAWYQEVCSKANLCGRVRVALDGVNCTLGGCEAALQHHITQVKAHPVLRGADIDFKLSPSPGALNAAARRESGFDQLSVKAVKEVRTRAHFNSVNVLLYDPAHTLALCVVSLGAQ---VPAELSARHVSPQEFHAMLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVMLLDARNGYESDIGRFGARGVPLLAPRTRQFSDLPRWIDAHLAELEGRTVLMYCTGGVRCERASAYLRAKGPAFADVVQLSGGIERYLQAFPD-GGFFAGKNFVFDERVSVAPAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRESSXXXADSTTASARSDSASCAVXXXXXXXXXXXXXXXXXXXXXAVVGRCALCTAAWDDYGARARCERCRVLMLVCPAC 1311
VLLYYKY D +S RE R WY++ C L GRVRVA DG+N TLGG A L+ H ++ G ID+KL+ SPG+LN A ESGFDQLSV+ +EV VSLG + V E +H+ P +FH ML+ A V+L+D RN YES IG F GV L P TR F+ PRW+D+ +L + ++MYCTGGVRCE+ASAY+++KGPAF++ QLSGGI+RYL+AFPD GG+F GKNFVFD R SV P A++ +CA C DDYG R RC+ CR+L+L+CPAC
Sbjct: 10 VLLYYKYTDTEVESLGGREGLRRWYEDTCGAKGLVGRVRVARDGINATLGGTMAKLRLHCVELAGFEGFEG--IDYKLARSPGSLNEAVEVESGFDQLSVQLTEEV------------------------VSLGPRAVGVHCEKGGKHLKPLDFHRMLSEADGEE----------------------------------EVVLIDVRNVYESRIGNFQCDGVETLLPATRTFNQFPRWVDSVENDLRDKKIMMYCTGGVRCEKASAYIKSKGPAFSNCFQLSGGIQRYLEAFPDDGGYFRGKNFVFDSRSSVPPE--------------------------------------------------------------------------RHGGAIISKCASCGRLHDDYGQRVRCDYCRLLLLLCPAC 303
BLAST of jgi.p|Trimin1|350674 vs. uniprot
Match: A0A7S3FTL5_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FTL5_9CHLO) HSP 1 Score: 233 bits (593), Expect = 1.810e-68 Identity = 155/430 (36.05%), Postives = 198/430 (46.05%), Query Frame = 1
Query: 31 AQTQAAVLLYYKYVDLGEKS--REECRAWYQEVCSKANLCGRVRVALDGVNCTLGGCEAALQHHITQVKAHPVLRGAD-IDFKLSPSPGALNAAARRESGFDQLSVKAVKEVRTRAHFNSVNVLLYDPAHTLALCVVSLG---AQVPAELSARHVSPQEFHAMLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVMLLDARNGYESDIGRFGARGVPLLAPRTRQFSDLPRWIDAHLAELEGRTVLMYCTGGVRCERASAYLRAKGPAFADVVQLSGGIERYLQAFPDGGFFAGKNFVFDERVSVAPAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRESSXXXADSTTASARSDSASCAVXXXXXXXXXXXXXXXXXXXXXAVVGRCALCTAAWDDYGARARCERCRVLMLVC 1302
A++Q VLLYYKY D+ + RE R WY+ C + L GRVRVA DGVN TLGG +L+ H Q++A +G + IDFKL S GALN R ESGFD+L V+ EV VSLG A + A+ A H+SP++FH L+ A V+L+D RN YES IG+F GV L P TR F+ PRW D EL G+ ++MYCTGGVRCE+ASA+++A G F +VVQL GGI+RYL++FP+GG + GKNFVFD R SV+P + VGRCA C +D YG RARC RCR+L+L+C
Sbjct: 17 AESQEGVLLYYKYTDVTSLAGGREGLRIWYEMSCLELGLVGRVRVAKDGVNATLGGSLQSLRRHCDQMEA----KGFEGIDFKLDRSHGALNERTRDESGFDRLRVQETDEV------------------------VSLGPRAAGILAKEGAPHLSPEDFHRELSDAKES-----------------------------------EVVLVDVRNVYESRIGKFQCEGVKTLVPETRTFAQFPRWADTRERELRGKRIMMYCTGGVRCEKASAFIKAMGDGFENVVQLKGGIQRYLESFPEGGHYKGKNFVFDSRSSVSPRLVRPED------------------------------------------------------------------------CTVGRCAGCGVPYDSYGLRARCGRCRLLLLLC 311
BLAST of jgi.p|Trimin1|350674 vs. uniprot
Match: A0A836BZU0_9CHLO (Rhodanese domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BZU0_9CHLO) HSP 1 Score: 246 bits (627), Expect = 5.650e-68 Identity = 203/443 (45.82%), Postives = 237/443 (53.50%), Query Frame = 1
Query: 91 REECRAWYQEVCSKANLCGRVRVALDGVNCTLGGCEAALQHHITQVKAHPVLRG-ADIDFKLSPSPGALNAAARRESGFDQLSVKAVKEVRTRAHFNSVNVLLYDPAHTLALCVVSLGAQVPAELSARHVSPQEFHAMLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---------------------------------VMLLDARNGYESDIGRFGAR-GVPLLAPRTRQFSDLPRWIDAHLAELEGRTVLMYCTGGVRCERASAYLRAKGPAFADVVQLSGGIERYLQAFPDGGFFAGKNFVFDERVSVAPAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRESSXXXADSTTASARSDSASCAVXXXXXXXXXXXXXXXXXXXXXAVVGRCALCTAAWDDYGARARCERCRVLMLVCPACQ 1314
RE AWY+ +C + L GR+RVA DGVN T+GG A L+ H V AH +LRG A IDFK +PS G NA E+ D+L V+ +E+ T + L D A P +A H++PQ+FH +LA A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+LLDARN YE+ IG F GVP L PRTR FS+LP W+DAH L G TVLMYCTGGVRCERASAYLR KGP F V QLSGGI+RYL+AFPDGGFF GKNF++D+R++V P S R + AVVGRCALC AWDDYG R RC RCR+L+LVC AC+
Sbjct: 101 REAVAAWYEALCGRLGLRGRIRVARDGVNVTVGGRMADLRAHAAAVAAHSLLRGGAAIDFKFAPSSGPRNAETLAETKMDRLMVRRCEELVT------LGPLARDRAD-------------PCASTAPHLTPQQFHDLLARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDGXXSXADGGASGEASAAPGRVVLLDARNLYETRIGHFDVGPGVPTLDPRTRCFSELPPWMDAHEGALRGATVLMYCTGGVRCERASAYLREKGPGFGAVYQLSGGIQRYLEAFPDGGFFRGKNFLYDDRIAVGP-----------------------------------------------SGREPGSE-----------------------GAVVGRCALCARAWDDYGPRLRCSRCRLLLLVCDACR 454
BLAST of jgi.p|Trimin1|350674 vs. uniprot
Match: I0YV93_COCSC (Phospholipase/Carboxylesterase family protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YV93_COCSC) HSP 1 Score: 239 bits (610), Expect = 8.380e-68 Identity = 139/316 (43.99%), Postives = 180/316 (56.96%), Query Frame = 1
Query: 37 TQAAVLLYYKYVDLGEKSREECRAWYQEVCSKANLCGRVRVALDGVNCTLGGCEAALQHHITQVKAHPVLRGADIDFKLSPSPGALNAAARRESGFDQLSVKAVKEVRTRAHFNSVNVLLYDPAHTLALCVVSLGAQVPAEL------SARHVSPQEFHAMLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVMLLDARNGYESDIGRFGARGVPLLAPRTRQFSDLPRWIDAHLAELEGRTVLMYCTGGVRCERASAYLRAKGPAFADVVQLSGGIERYLQAFPDGGFFAGKNFVFDERVSVA 966
++ VLLYYKYVDL E+ + + W Q +C L GR+RVA DG+N T+GG AAL+ HI V+ HP+L G+ IDFKL+ SPG ++ A RE+GFD L+V +EV V+LG +L +A HVSPQ+FH++L + +LLD RN YE+ +G F GV L+ P+ R F++L W+D A L R VLMYCTGGVRCERASAYLR+KGPAF DV QL GGI+RY++AFP GG+FAG+NFVFDERV+VA
Sbjct: 5 SEQGVLLYYKYVDLTEE-QGAVKEWMQNLCQNLGLRGRIRVARDGINTTVGGTMAALRDHIAGVERHPLL-GSGIDFKLASSPGPSSSQAARETGFDSLAVTVCQEV------------------------VALGGSTQMDLEELKEATALHVSPQQFHSLLDQSVEDSTK--------------------------------ETVLLDVRNLYETRVGHFDKDGVRLVDPQLRSFNELRAWLDCQAAALADRRVLMYCTGGVRCERASAYLRSKGPAFQDVYQLEGGIQRYMEAFPLGGYFAGRNFVFDERVTVA 262
BLAST of jgi.p|Trimin1|350674 vs. uniprot
Match: A0A8J4C990_9CHLO (Rhodanese domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C990_9CHLO) HSP 1 Score: 246 bits (627), Expect = 1.020e-67 Identity = 172/493 (34.89%), Postives = 225/493 (45.64%), Query Frame = 1
Query: 13 TQNFPHAQTQAAVLLYYKYVDLGEKSREECRAWYQEVCSKANLCGRVRVALDGVNCTLGGCEAALQHHITQVKAHPVLRGADIDFKLSPSPGALNAAARRESGFDQLSVKAVKEV---------RTRAHFNSVNVLLYDPAHTLALCV-----------VSLGAQV-PAEL-SARHVSPQEFHAMLAA-------------------------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVMLLDARNGYESDIGRFGAR-GVPLLAPRTRQFSDLPRWIDAHLAELEGRTVLMYCTGGVRCERASAYLRAKGPAFADVVQLSGGIERYLQAFPDGGFFAGKNFVFDERVSVAPAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRESSXXXADSTTASARSDSASCAVXXXXXXXXXXXXXXXXXXXXXAVVGRCALCTAAWDDYGARARCERCRVLMLVCPAC 1311
TQ+ ++ Q +LLYYKY+ L E+ +Y E+CS+ +L GR+RVA DGVN T+GG +ALQ H+ V HP+LRG+DIDFKL+ S G N R E+ D+L V+ +E+ R N+ L + H + V VS G++V PA S H+ P+ A A SV+LLDARN YE+ IG F A V L PRTR FSDLP W+DAH L RTVLMYCTGGVRCERASAYLR KGP F+ V QLSGGI+RYL+ FPDGG+F GKNF++D+R++V P ++ + S S+++ + VVGRC +C +WDDYGAR RC RCR+L+L+C C
Sbjct: 17 TQSTQTSEVQG-ILLYYKYLPLQGGDAEDVTKFYTELCSRLDLRGRIRVARDGVNVTVGGSMSALQAHVAAVTEHPLLRGSDIDFKLAASGGPRNEVTRSETKMDRLVVRLCEELVTLGPLARHRADPRANTAPHLTPEQFHQILDGVIAGLPVPPGEGVSAGSRVVPAPAASGTHLRPEAAAAPTVGSGPGSKSTAAKRNPLGTCVEDVEDVEAPRSNTGGRGGALAPAGHPAATLTDASRGSGVEGCGISCIHRTGDNAAAGSVVLLDARNIYETRIGHFDAGPAVTTLDPRTRCFSDLPAWLDAHEELLRNRTVLMYCTGGVRCERASAYLREKGPEFSRVFQLSGGIQRYLERFPDGGYFRGKNFLYDDRIAVGPEISE------------------------------QVSPRPWCSSSSSPS-----------------------------PGVVGRCLMCRCSWDDYGARLRCSRCRLLVLICDTC 449
BLAST of jgi.p|Trimin1|350674 vs. uniprot
Match: A0A2V0PBW1_9CHLO (Rhodanese domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PBW1_9CHLO) HSP 1 Score: 242 bits (618), Expect = 1.410e-67 Identity = 152/309 (49.19%), Postives = 188/309 (60.84%), Query Frame = 1
Query: 55 LYYKYVDLGEKSREECRAWYQEVCSKANLCGRVRVALDGVNCTLGGCEAALQHHITQVKAHPVLRGADIDFKLSPSPGALNAAARRESGFDQLSVKAVKEVRTRAHFNSVNVLLYDPAHTLALCVVSLGAQVPAELSARHVSPQEFHAMLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVMLLDARNGYESDIGRFGARGVPLLAPRTRQFSDLPRWIDAHLAELEGRTVLMYCTGGVRCERASAYLRAKGPAFADVVQLSGGIERYLQAFPDGGFFAGKNFVFDERVSVAPAVAA 981
LYYKYV L + E AWY+ +C GR+RVA DGVN T+GG ++ HI V+AHP+L GA IDFK++P G L++ ESGF L V KE+ ++L + A P RH+SP EFH ML A XXXXXXXXXXX XXXX ++L+DARN YE++IGRF GVPLL PRTR +S+LP +DA A L GR +LMYCTGGVRCERASAY+R KG AF +V QLSGG++RYL+AFPDGGFFAG+ FV+D R S+ P+ A
Sbjct: 56 LYYKYVPLSGREAEVA-AWYRALCGSLRQTGRIRVAADGVNATVGGSADSIDAHIAAVRAHPLLAGAGIDFKVAPCSGPLSSGTLEESGFLGLRVAVCKEL-------------------VSLGAAAQSAADPFANGGRHLSPHEFHEMLQRAARRGDREAAGGXXXXXXXXXXXPEXXXXGDGADGKP---IVLVDARNAYETEIGRFEVPGVPLLDPRTRSYSELPARLDAREAALAGRRILMYCTGGVRCERASAYVREKGAAFDEVYQLSGGVQRYLEAFPDGGFFAGRLFVYDPRGSMGPSQGA 341
BLAST of jgi.p|Trimin1|350674 vs. uniprot
Match: A0A250WVQ1_9CHLO (Rhodanese domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WVQ1_9CHLO) HSP 1 Score: 244 bits (623), Expect = 2.070e-67 Identity = 154/439 (35.08%), Postives = 206/439 (46.92%), Query Frame = 1
Query: 49 VLLYYKYVDLGEKSREECRAWYQEVCSKANLCGRVRVALDGVNCTLGGCEAALQHHITQVKAHPVLRGADIDFKLSPSPGALNA--AARRESGFDQLSVKAVKEVRTRAHFNSVNVLLYDPAHTLALCVVSLGAQVPAELSARHVSPQEFHAMLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVMLLDARNGYESDIGRFGARGVPLLAPRTRQFSDLPRWIDAHLAELEGRTVLMYCTGGVRCERASAYLRAKGPAFADVVQLSGGIERYLQAFPDGGFFAGKNFVFDERVSVAPAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRESSXXXADSTTASARS----------------DSASCAVXXXXXXXXXXXXXXXXXXXXXAVVGRCALCTAAWDDYGARARCERCRVLMLVCPAC 1311
VLLYY Y + ++E ++ + C +L GR+RVA DG+N T+GG E ++ H+ V++HP+LRG +IDFKL+ +P A +A AA E+GF+ LSV+ KE+ T ++ G P E +A H+ P EFH ML + +++D RN YE+ IG F G+PLL PRTR FSDLP W+D +L G+ ++MYCTGGVRCERASAYL+ KG F DV QL GGI+RYL+A+ + GFF GKNFV+D+R++V P+ A+ S D A + DS A+ VVGRCALC WDDYG RARC MLVC C
Sbjct: 20 VLLYYCYKYFVDDEQQEMGCFFSDNCKYLDLKGRIRVAEDGINVTVGGLEDNIKRHVEAVRSHPLLRGCNIDFKLALNPAATSASDAASAETGFNTLSVRICKELVTMGP-------------------LAQGRANPLENAATHLKPAEFHGMLTSVTTHGKELGRDFQEGVDAHK-------------------ETVIIDVRNMYETQIGHFHVEGIPLLDPRTRCFSDLPAWLDKQEEKLRGKRIMMYCTGGVRCERASAYLKEKGAGFQDVYQLEGGIQRYLEAYGERGFFKGKNFVYDDRIAVGPSNTASSVPEHVGHQDLPVEGRRAVLPEQVMKRPVPFSGSQTDDCRNPDALNAVHGQDLVNPQEVLGKDSHHIAIPHDTASCPPSSSCCMQPAAVE-VVGRCALCENPWDDYGLRARCXXXXXXMLVCDQC 419
BLAST of jgi.p|Trimin1|350674 vs. uniprot
Match: A0A8J9RWV3_9CHLO (Probable thiosulfate sulfurtransferase/rhodanese-like domain-containing protein at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RWV3_9CHLO) HSP 1 Score: 234 bits (596), Expect = 2.430e-65 Identity = 146/318 (45.91%), Postives = 177/318 (55.66%), Query Frame = 1
Query: 31 AQTQAAVLLYYKYVDLGEKSREECRAWYQEVCSKANLCGRVRVALDGVNCTLGGCEAALQHHITQVKAHPVLRGADIDFKLSPSPGALNAAARRESGFDQLSVKAVKEVRTRAHFNSVNVLLYDPAHTLALCVVSLG---AQVPAEL---SARHVSPQEFHAMLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVMLLDARNGYESDIGRFGARGVPLLAPRTRQFSDLPRWIDAHLAELEGRTVLMYCTGGVRCERASAYLRAKGPAFADVVQLSGGIERYLQAFPDGGFFAGKNFVFDERVSVA 966
A TQ +LLYYKYVDL ++ + + W Q +C L GR+RVA DG+N T+GG AAL+ HI V H +L G IDFKL+ S G + A RE+GF L+V +EV V+LG P EL +A HVSPQ FH +L + +LLD RN YE+ IG F GV LL P+ R F++L W+D A L R VLMYCTGGVRCERASAYLR+KGPAF DVVQLSGGI+RY++AFPDGGFFAGKNFVFDERV+VA
Sbjct: 3 ASTQG-ILLYYKYVDLTDQ-QTAVQQWMQSLCEDLGLRGRIRVARDGINTTVGGSMAALRAHIDAVHQHHLL-GTGIDFKLASSSGPSSTQAARETGFQSLTVSMCQEV------------------------VALGDGPVSDPQELEKTTAPHVSPQLFHDLLDQSKEGSSK--------------------------------ETVLLDVRNLYETRIGHFHKEGVRLLDPQLRSFNELRTWLDRQAAALANRRVLMYCTGGVRCERASAYLRSKGPAFQDVVQLSGGIQRYMEAFPDGGFFAGKNFVFDERVTVA 261 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350674 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8532 ID=mRNA_8532|Name=jgi.p|Trimin1|350674|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1604bp|location=Sequence derived from alignment at Contig_68:623749..626878+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGATTTTCCGCACCCAAAATTTCCCGCATGCTCAGACGCAAGCAGCGGTback to top protein sequence of jgi.p|Trimin1|350674 >Trimin1|350674|estExt_Genemark1.C_Ctg_680091 ID=Trimin1|350674|estExt_Genemark1.C_Ctg_680091|Name=jgi.p|Trimin1|350674|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=516bp MIFRTQNFPHAQTQAAVLLYYKYVDLGEKSREECRAWYQEVCSKANLCGRback to top mRNA from alignment at Contig_68:623749..626878+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8532 ID=mRNA_8532|Name=jgi.p|Trimin1|350674|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3130bp|location=Sequence derived from alignment at Contig_68:623749..626878+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_68:623749..626878+ >mRNA_8532 ID=mRNA_8532|Name=jgi.p|Trimin1|350674|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1548bp|location=Sequence derived from alignment at Contig_68:623749..626878+ (Tribonema minus UTEX_B_3156 )back to top |