Trimin1|350660|estExt_Genemark1.C_Ctg_680070 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|350660
Unique Name	Trimin1\|350660\|estExt_Genemark1.C_Ctg_680070
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	710

Homology

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BLAST of jgi.p|Trimin1|350660 vs. uniprot
Match: A0A836CAY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY3_9STRA)

HSP 1 Score: 993 bits (2566), Expect = 0.000e+0
Identity = 709/709 (100.00%), Postives = 709/709 (100.00%), Query Frame = 0

Query:    1 MGPGGISVADLKNMTALRVAQQTQAQQXXXXXXXXXXXXXXQRSLDQPPAPLLRPPSFHQPRAHVGDASAIPPPLRMSPPLPSRYGPASPALDQRDHMDPALLMSPPAPPLPPQAPAPAPAAPPRGRGGLTVEELKALTRQRLRAQGVAAGQGGAASRALLSSPPPTGPAQHTMRRAASMPYPGPGGHWGDAAPSPLPPPAQQQXXXXAHAMHAASMRAHGASPPLIPRNAAGSRGGIGXXXXXXXXAHDPVVAALAADWEAQLRLMAQRGECSSPQALSQPASPHFSPPQVSRSSSRSQLPPTAPPPPGLLGLHSPPFMSSAAMRAGPLSAAAVGEAFALGNGXXXXXADLAPAHRGLHHTRSLPQLLRQQQQQRGAGGPASPYDSEWESPRPQQGPXXXXXXXXXXXXXXXXXXXXEHLLEQXXXXXXXALLXXXXXXXXXXXXXVEQRXXXXXXXXXXXXXXXXXXXXXXXXXXWQSSAELDDAPLPPSWSRGPTRSASXXXXXXXXXXXXXXXXXXAYSIGSDGGGGGMVSGYGGDPALPRSRPQHLRINSNDAFHAGGGGSSGSLGXXXXXXXXXXXXXSTQIRAAMANGTGGYSAHAQPAQRPHHQLPPSTRAAIATEVAEFALLTPTAGGGPSDVQLQWPQQDWSSAAXXXXXXXXXXXXXXXXXXXXXXYVLWSSANXXXXXXXXXXXXSRSPPSRWLDEM 709
            MGPGGISVADLKNMTALRVAQQTQAQQXXXXXXXXXXXXXXQRSLDQPPAPLLRPPSFHQPRAHVGDASAIPPPLRMSPPLPSRYGPASPALDQRDHMDPALLMSPPAPPLPPQAPAPAPAAPPRGRGGLTVEELKALTRQRLRAQGVAAGQGGAASRALLSSPPPTGPAQHTMRRAASMPYPGPGGHWGDAAPSPLPPPAQQQXXXXAHAMHAASMRAHGASPPLIPRNAAGSRGGIGXXXXXXXXAHDPVVAALAADWEAQLRLMAQRGECSSPQALSQPASPHFSPPQVSRSSSRSQLPPTAPPPPGLLGLHSPPFMSSAAMRAGPLSAAAVGEAFALGNGXXXXXADLAPAHRGLHHTRSLPQLLRQQQQQRGAGGPASPYDSEWESPRPQQGPXXXXXXXXXXXXXXXXXXXXEHLLEQXXXXXXXALLXXXXXXXXXXXXXVEQRXXXXXXXXXXXXXXXXXXXXXXXXXXWQSSAELDDAPLPPSWSRGPTRSASXXXXXXXXXXXXXXXXXXAYSIGSDGGGGGMVSGYGGDPALPRSRPQHLRINSNDAFHAGGGGSSGSLGXXXXXXXXXXXXXSTQIRAAMANGTGGYSAHAQPAQRPHHQLPPSTRAAIATEVAEFALLTPTAGGGPSDVQLQWPQQDWSSAAXXXXXXXXXXXXXXXXXXXXXXYVLWSSANXXXXXXXXXXXXSRSPPSRWLDEM
Sbjct:    1 MGPGGISVADLKNMTALRVAQQTQAQQXXXXXXXXXXXXXXQRSLDQPPAPLLRPPSFHQPRAHVGDASAIPPPLRMSPPLPSRYGPASPALDQRDHMDPALLMSPPAPPLPPQAPAPAPAAPPRGRGGLTVEELKALTRQRLRAQGVAAGQGGAASRALLSSPPPTGPAQHTMRRAASMPYPGPGGHWGDAAPSPLPPPAQQQXXXXAHAMHAASMRAHGASPPLIPRNAAGSRGGIGXXXXXXXXAHDPVVAALAADWEAQLRLMAQRGECSSPQALSQPASPHFSPPQVSRSSSRSQLPPTAPPPPGLLGLHSPPFMSSAAMRAGPLSAAAVGEAFALGNGXXXXXADLAPAHRGLHHTRSLPQLLRQQQQQRGAGGPASPYDSEWESPRPQQGPXXXXXXXXXXXXXXXXXXXXEHLLEQXXXXXXXALLXXXXXXXXXXXXXVEQRXXXXXXXXXXXXXXXXXXXXXXXXXXWQSSAELDDAPLPPSWSRGPTRSASXXXXXXXXXXXXXXXXXXAYSIGSDGGGGGMVSGYGGDPALPRSRPQHLRINSNDAFHAGGGGSSGSLGXXXXXXXXXXXXXSTQIRAAMANGTGGYSAHAQPAQRPHHQLPPSTRAAIATEVAEFALLTPTAGGGPSDVQLQWPQQDWSSAAXXXXXXXXXXXXXXXXXXXXXXYVLWSSANXXXXXXXXXXXXSRSPPSRWLDEM 709

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350660 vs. uniprot

BLAST of jgi.p|Trimin1|350660 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CAY3_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 350..512
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..451
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 389..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 579..593
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 655..709
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 468..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 495..512
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 533..619

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_68	contig	Contig_68:455973..458552 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350660	mRNA_8512	Tribonema minus UTEX_B_3156	mRNA	Contig_68 455973..458666 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|350660|estExt_Genemark1.C_Ctg_680070 ID=Trimin1|350660|estExt_Genemark1.C_Ctg_680070|Name=jgi.p|Trimin1|350660|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=710bp
MGPGGISVADLKNMTALRVAQQTQAQQRAATAAAAAAAAAAQRSLDQPPA
PLLRPPSFHQPRAHVGDASAIPPPLRMSPPLPSRYGPASPALDQRDHMDP
ALLMSPPAPPLPPQAPAPAPAAPPRGRGGLTVEELKALTRQRLRAQGVAA
GQGGAASRALLSSPPPTGPAQHTMRRAASMPYPGPGGHWGDAAPSPLPPP
AQQQQQHQAHAMHAASMRAHGASPPLIPRNAAGSRGGIGGGDGGGGGAHD
PVVAALAADWEAQLRLMAQRGECSSPQALSQPASPHFSPPQVSRSSSRSQ
LPPTAPPPPGLLGLHSPPFMSSAAMRAGPLSAAAVGEAFALGNGGGGGGA
DLAPAHRGLHHTRSLPQLLRQQQQQRGAGGPASPYDSEWESPRPQQGPPQ
QQQRWPSQQQQSQMAHHREHLLEQQHQQHREALLEQHHREALFERQHVEQ
RRQQQQAPPPMSHRDDWRQPPPQQQQQWQSSAELDDAPLPPSWSRGPTRS
ASWREGSGGSNFWREAGNGNAYSIGSDGGGGGMVSGYGGDPALPRSRPQH
LRINSNDAFHAGGGGSSGSLGGSGHGGGSSGHGGSTQIRAAMANGTGGYS
AHAQPAQRPHHQLPPSTRAAIATEVAEFALLTPTAGGGPSDVQLQWPQQD
WSSAAAAAALSGGGGGGDGGGDADGDAYVLWSSANERGRGGNGNGDRSRS
PPSRWLDEM*