Trimin1|350648|estExt_Genemark1.C_Ctg_680053 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350648
Unique NameTrimin1|350648|estExt_Genemark1.C_Ctg_680053
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length449
Homology
BLAST of jgi.p|Trimin1|350648 vs. uniprot
Match: A0A836CA93_9STRA (DUF1992 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA93_9STRA)

HSP 1 Score: 733 bits (1891), Expect = 2.660e-264
Identity = 448/448 (100.00%), Postives = 448/448 (100.00%), Query Frame = 0
Query:    1 MRGALCRHATVLRCRGRSAAPTAXXXXXXXXXXXXXXXXPSSQKAQDSADSGSHMPTSEQQSEMDFDILAVMAKSNARWSKQQQPAATADVGXXXXXXXXXXKHLAPQHRRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDYQLDREGLVSEEAGANRLTQAKGLDAIVEDKIQMAIMRGDFDALRGRGQPLETEREGSVVDPATDVISRLLAQNGILPGWVEKQKAVNALGAALRARVRGDWAAAYLDANRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAWVHPDAAAFRRRAEGAADHADVLRELNAAIDAYNLEVPSYHLQRGRARIAWLLEAVTAAPIRGRAEAAALAEEGRRARQQALSFETLLLDPPSYNTPPAHSHAAMRSTGGGGRAWAADTGYGAGMHGGGGAGAARGSNALLQVCMLPIDGLADMLRRAFF 448
            MRGALCRHATVLRCRGRSAAPTAXXXXXXXXXXXXXXXXPSSQKAQDSADSGSHMPTSEQQSEMDFDILAVMAKSNARWSKQQQPAATADVGXXXXXXXXXXKHLAPQHRRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDYQLDREGLVSEEAGANRLTQAKGLDAIVEDKIQMAIMRGDFDALRGRGQPLETEREGSVVDPATDVISRLLAQNGILPGWVEKQKAVNALGAALRARVRGDWAAAYLDANRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAWVHPDAAAFRRRAEGAADHADVLRELNAAIDAYNLEVPSYHLQRGRARIAWLLEAVTAAPIRGRAEAAALAEEGRRARQQALSFETLLLDPPSYNTPPAHSHAAMRSTGGGGRAWAADTGYGAGMHGGGGAGAARGSNALLQVCMLPIDGLADMLRRAFF
Sbjct:    1 MRGALCRHATVLRCRGRSAAPTAXXXXXXXXXXXXXXXXPSSQKAQDSADSGSHMPTSEQQSEMDFDILAVMAKSNARWSKQQQPAATADVGXXXXXXXXXXKHLAPQHRRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDYQLDREGLVSEEAGANRLTQAKGLDAIVEDKIQMAIMRGDFDALRGRGQPLETEREGSVVDPATDVISRLLAQNGILPGWVEKQKAVNALGAALRARVRGDWAAAYLDANRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAWVHPDAAAFRRRAEGAADHADVLRELNAAIDAYNLEVPSYHLQRGRARIAWLLEAVTAAPIRGRAEAAALAEEGRRARQQALSFETLLLDPPSYNTPPAHSHAAMRSTGGGGRAWAADTGYGAGMHGGGGAGAARGSNALLQVCMLPIDGLADMLRRAFF 448          
BLAST of jgi.p|Trimin1|350648 vs. uniprot
Match: A0A401NSV9_SCYTO (J domain-containing protein n=2 Tax=Scyliorhinus TaxID=7829 RepID=A0A401NSV9_SCYTO)

HSP 1 Score: 94.0 bits (232), Expect = 2.120e-17
Identity = 47/137 (34.31%), Postives = 81/137 (59.12%), Query Frame = 0
Query:  103 KHLAPQHRRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDY--------QLDREGLVSEEAGANRLTQAKGLDAIVEDKIQMAIMRGDFDALRGRGQPLETEREGSVVDPATDVISRLLAQNGILPGWVEKQKAV 231
            KH+APQHR++LS   IG GTP  REK+  + R+  A  +  DY        +L+   +V +   + ++   + ++ +VED IQ ++ +G+FD L G+G+PL+   +   +DP T  ++R+L +NG  P W+ +QK +
Sbjct:  114 KHMAPQHRQYLSFEGIGIGTPSQREKQYRKFRMNRATEQVLDYRKQKLQHEELENSMMVKDVQQSKKIKITQAVERLVEDLIQESMAKGEFDNLSGKGKPLQKLSQYPYIDPMTHNLNRILIENGYQPEWIVRQKEI 250          
BLAST of jgi.p|Trimin1|350648 vs. uniprot
Match: UPI001B7E093B (dnaJ homolog subfamily C member 28 n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7E093B)

HSP 1 Score: 93.6 bits (231), Expect = 2.530e-17
Identity = 47/137 (34.31%), Postives = 81/137 (59.12%), Query Frame = 0
Query:  103 KHLAPQHRRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDY--------QLDREGLVSEEAGANRLTQAKGLDAIVEDKIQMAIMRGDFDALRGRGQPLETEREGSVVDPATDVISRLLAQNGILPGWVEKQKAV 231
            KH+APQHR++LS   IG GTP  REK+  + R+  A  +  DY        +L+   +V +   + ++   + ++ +VED IQ ++ +G+FD L G+G+PL+   +   +DP T  ++R+L +NG  P W+ +QK +
Sbjct:  103 KHVAPQHRQYLSFEGIGTGTPSQREKQYRKFRMNRATDQVLDYRKQKLQHQELENTMMVKDVQQSKKIKITQAVERLVEDLIQESMAKGEFDNLSGKGKPLQKFSQYPYIDPMTHNLNRILIENGYQPEWIVQQKEI 239          
BLAST of jgi.p|Trimin1|350648 vs. uniprot
Match: B4KFE2_DROMO (J domain-containing protein n=4 Tax=repleta group TaxID=32321 RepID=B4KFE2_DROMO)

HSP 1 Score: 92.0 bits (227), Expect = 8.690e-17
Identity = 72/262 (27.48%), Postives = 119/262 (45.42%), Query Frame = 0
Query:  103 KHLAPQHRRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDYQLDREGLVSEEA---------GANRLTQAKGLDAIVEDKIQMAIMRGDFDALRGRGQPLE-TEREGSVVDPATDVISRLLAQNGILPGWVEKQKAVNALGAALRARVR------GDWAAAYLDANRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAWVHPDAAAFRRRAEGAADHADVLRELNAAIDAYNLEVPSYHLQRGRARIAWLLEAVTAAP 348
            +H APQHR++LS+  IG GTP  R+K+  ++R   A  R  ++++++     E A         G + +    G+D +VED IQ A+ +GDF+ L G G+PL   + +   +D  T  +++++  NG  P W+   + +    A L+ ++R      GDW  A L+                                        + AA+++ A+    HAD +++LN  ID YNL VP    Q  R  +  L E+V   P
Sbjct:  108 RHTAPQHRQYLSNEGIGVGTPFQRQKQYQQVRAMKAQERVLEHRVEKAA-AGEHALMRKGGSYYGKHAIKTKYGIDRVVEDLIQEAMSKGDFNNLNGAGKPLSLAQTQNPYLDFTTHKLNKIMLDNGFTPEWITLSRDIREAAAKLKQQLRNERCYYGDWPLATLE----------------------------------------EQAAWQKFAQL---HADDIKQLNKTIDKYNLIVPILENQYFRLTLDRLAESVFKEP 325          
BLAST of jgi.p|Trimin1|350648 vs. uniprot
Match: A0A3R7PAH1_PENVA (DnaJ-like protein subfamily C member 28 n=3 Tax=Penaeus TaxID=133894 RepID=A0A3R7PAH1_PENVA)

HSP 1 Score: 89.7 bits (221), Expect = 7.120e-16
Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = 0
Query:  103 KHLAPQHRRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDY-------QLDREGLVSEE-AGANRLTQAKGLDAIVEDKIQMAIMRGDFDALRGRGQPLETEREGSVVDPATDVISRLLAQNGILPGWVEKQKAV 231
            K  APQHR++LS+  IG GTP  R+K+ S+ ++  A     DY       Q     LV ++ A A ++    G+D IV+D IQ A+ RGDFD L   G+PLET      VD  T  ++ +L  NG  P WV  +K +
Sbjct:  135 KQTAPQHRQYLSYEGIGIGTPGQRQKQYSKFQVLRASENVIDYKVKQISSQYPETSLVDKDRAAAKKIRTRFGIDRIVDDMIQEAMARGDFDNLSMAGKPLETRNHNPYVDTVTHKLNEVLINNGYAPEWVMLEKEI 271          
BLAST of jgi.p|Trimin1|350648 vs. uniprot
Match: Q29P30_DROPS (dnaJ homolog subfamily C member 28 n=3 Tax=pseudoobscura subgroup TaxID=32358 RepID=Q29P30_DROPS)

HSP 1 Score: 88.2 bits (217), Expect = 1.820e-15
Identity = 71/250 (28.40%), Postives = 111/250 (44.40%), Query Frame = 0
Query:  103 KHLAPQHRRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDYQLDREG-----LVSEEAG---ANRLTQAKGLDAIVEDKIQMAIMRGDFDALRGRGQPLET-EREGSVVDPATDVISRLLAQNGILPGWVEKQKAVNALGAALRARVR------GDWAAAYLDANRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAWVHPDAAAFRRRAEGAADHADVLRELNAAIDAYNLEVPSYHLQRGRARI 337
            KH APQHR++LS+  IG GTP  R+K+  ++R   A  R  ++++D+       L+S+E      + +    G+D +VED IQ A+ +GDF+ L G G+PL + + +   +D  T  +++++  NG  P W+   K +      L   VR      GDW                                        P     + AA+ R  +   DH + ++ELN  ID YNL VP    Q  R R+
Sbjct:  109 KHTAPQHRQYLSNEGIGVGTPFQRQKQYQQVRAMKAQERVLEHRIDKAAAGDSDLISKEGNHFQKHAIKTKYGIDRVVEDLIQEAMSKGDFNNLNGSGKPLSSAQSQNPYLDFTTHKLNKIMLDNGFTPEWITLGKEIRDARMQLLKTVRQERVYYGDW----------------------------------------PLQNAEEQAAWLRFTQ---DHEEEVQELNKMIDKYNLIVPILKNQFFRYRL 315          
BLAST of jgi.p|Trimin1|350648 vs. uniprot
Match: W7U8R2_9STRA (DnaJ subfamily C member 28 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8R2_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.900e-15
Identity = 70/231 (30.30%), Postives = 112/231 (48.48%), Query Frame = 0
Query:  110 RRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDYQLDREGL---VSEEAGA---NRLTQAK--GLDAIVEDKIQMAIMRGDFDALRGRGQPLETEREGSVVDPATDVISRLLAQNGILPGWVEKQKAVNALGAALRARVRGDWAAAYLDANRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAWVHPDAAAFRRRAEGAADHADVLRELNAAIDAYNLEVPSYHLQR 332
            R+FL+H  +  GT   RE+ A + R+         +   R G    V EE G    NR+ + +  G+ ++VE++IQ++++RG+F  L+ RG+ LE ER   + D  TD+   +L +NG+LP W+++QK V ++   L+ R+  ++A A +DAN                                P    P   AF  R  G    A+    +N+ I  YNL+VP+ HLQR
Sbjct:   83 RQFLTHPGVPAGTMFAREEMAMKKRMMETKEGVQKHLAKRLGSADDVLEEQGEDAQNRIERGRRTGVASLVEERIQLSMIRGEFANLKRRGK-LERERTPGL-DRTTDIFMDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDAN----------------------PELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQR 289          
BLAST of jgi.p|Trimin1|350648 vs. uniprot
Match: UPI001E67278F (dnaJ homolog subfamily C member 28-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E67278F)

HSP 1 Score: 87.8 bits (216), Expect = 2.940e-15
Identity = 53/149 (35.57%), Postives = 81/149 (54.36%), Query Frame = 0
Query:  103 KHLAPQHRRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDYQLDR-------EGLVSEE-AGANRLTQAKGLDAIVEDKIQMAIMRGDFDALRGRGQPLETEREGSVVDPATDVISRLLAQNGILPGWVEKQKAVNALGAALRARVR 243
            KH APQHR++LS+  IG GTP  REK+ +R +   A +   DY++ +         LV ++ A A ++    G+D IV+D IQ A+ +G+FD L   G+PL  +     VD  T  ++++L  NG  P WV  +K +      LR  +R
Sbjct:  133 KHTAPQHRQYLSYEGIGVGTPSQREKQYTRYQALRASTNVTDYKIQKITSQYPETSLVDKDRAFAKKIRTRYGIDRIVDDMIQEAMAKGEFDNLPNAGKPLPQQNCNPYVDTVTHKLNQVLINNGYAPEWVMLEKEIREDRMYLRKMLR 281          
BLAST of jgi.p|Trimin1|350648 vs. uniprot
Match: A0A6P4FEJ8_DRORH (dnaJ homolog subfamily C member 28 n=4 Tax=melanogaster group TaxID=32346 RepID=A0A6P4FEJ8_DRORH)

HSP 1 Score: 87.4 bits (215), Expect = 3.210e-15
Identity = 53/159 (33.33%), Postives = 87/159 (54.72%), Query Frame = 0
Query:  103 KHLAPQHRRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDYQLDREG-----LVSEEAGANRLTQAK---GLDAIVEDKIQMAIMRGDFDALRGRGQPLE-TEREGSVVDPATDVISRLLAQNGILPGWVEKQKAVNALGAALRARVR------GDW 246
            KH APQHR++LS+  IG G P+ R+K+  ++R   A  R  ++++D+       L+S+     R    K   G+D +VED IQ A+ +GDF+ L G G+PL  T+ +   +D  T  +++++  NG  P W+   K +    A L+ ++R      GDW
Sbjct:  105 KHTAPQHRQYLSNEGIGVGNPYQRQKQYQQVRAMKAQERVLEHRIDKAAAGEKTLMSKGGNHFRKHAIKTKYGIDRVVEDLIQEAMSKGDFNNLNGAGKPLSSTQSQNPYLDFTTHKLNKIMLDNGFTPEWISLGKDIRDAVAQLKKKLRQERIFYGDW 263          
BLAST of jgi.p|Trimin1|350648 vs. uniprot
Match: A0A8B7MRX9_DROEL (dnaJ homolog subfamily C member 28 n=1 Tax=Drosophila elegans TaxID=30023 RepID=A0A8B7MRX9_DROEL)

HSP 1 Score: 87.0 bits (214), Expect = 4.370e-15
Identity = 52/160 (32.50%), Postives = 88/160 (55.00%), Query Frame = 0
Query:  103 KHLAPQHRRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDYQLDREG-----LVSEEAGANRLTQA----KGLDAIVEDKIQMAIMRGDFDALRGRGQPLE-TEREGSVVDPATDVISRLLAQNGILPGWVEKQKAVNALGAALRARVR------GDW 246
            +H APQHR++LS+  IG GTP  R+K+  ++R   A  R  ++++D+       L+S+  G +    A     G+D +VED IQ A+ +GDF+ L G G+PL  T+ +   +D  T  +++++  NG  P W+   K +    A L+ ++R      G+W
Sbjct:  105 RHTAPQHRQYLSNEGIGMGTPFQRQKQYQQVRAMKAQERVLEHRIDKAAAGEKTLMSKGGGGHFRRHAIKTKYGIDRVVEDLIQEAMSKGDFNNLNGAGKPLSSTQSQNPYLDFTTHKLNKIMLDNGFTPEWISLGKEIRDAVAKLKQKLRQERIFYGEW 264          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350648 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CA93_9STRA2.660e-264100.00DUF1992 domain-containing protein n=1 Tax=Tribonem... [more]
A0A401NSV9_SCYTO2.120e-1734.31J domain-containing protein n=2 Tax=Scyliorhinus T... [more]
UPI001B7E093B2.530e-1734.31dnaJ homolog subfamily C member 28 n=1 Tax=Carchar... [more]
B4KFE2_DROMO8.690e-1727.48J domain-containing protein n=4 Tax=repleta group ... [more]
A0A3R7PAH1_PENVA7.120e-1638.69DnaJ-like protein subfamily C member 28 n=3 Tax=Pe... [more]
Q29P30_DROPS1.820e-1528.40dnaJ homolog subfamily C member 28 n=3 Tax=pseudoo... [more]
W7U8R2_9STRA1.900e-1530.30DnaJ subfamily C member 28 n=2 Tax=Nannochloropsis... [more]
UPI001E67278F2.940e-1535.57dnaJ homolog subfamily C member 28-like n=1 Tax=Pr... [more]
A0A6P4FEJ8_DRORH3.210e-1533.33dnaJ homolog subfamily C member 28 n=4 Tax=melanog... [more]
A0A8B7MRX9_DROEL4.370e-1532.50dnaJ homolog subfamily C member 28 n=1 Tax=Drosoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018961DnaJ homologue, subfamily C, member 28, conserved domainPFAMPF09350DUF1992coord: 171..239
e-value: 1.4E-15
score: 57.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..64
NoneNo IPR availablePANTHERPTHR24016:SF12DNAJ HOMOLOG SUBFAMILY C MEMBER 28coord: 85..242
NoneNo IPR availablePANTHERPTHR24016CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4coord: 85..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_68contigContig_68:366189..368890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350648mRNA_8493Tribonema minus UTEX_B_3156 mRNAContig_68 366189..368890 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350648|estExt_Genemark1.C_Ctg_680053 ID=Trimin1|350648|estExt_Genemark1.C_Ctg_680053|Name=jgi.p|Trimin1|350648|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=449bp
MRGALCRHATVLRCRGRSAAPTAAAAAAAPMRQSSGAAAPSSQKAQDSAD
SGSHMPTSEQQSEMDFDILAVMAKSNARWSKQQQPAATADVGGAEEEEED
EKKHLAPQHRRFLSHAEIGPGTPHNREKRASRLRLALAVSRSHDYQLDRE
GLVSEEAGANRLTQAKGLDAIVEDKIQMAIMRGDFDALRGRGQPLETERE
GSVVDPATDVISRLLAQNGILPGWVEKQKAVNALGAALRARVRGDWAAAY
LDANRGGGGGGAPHAPSPGGTRSGGGGSDSGGGGGAPAWVHPDAAAFRRR
AEGAADHADVLRELNAAIDAYNLEVPSYHLQRGRARIAWLLEAVTAAPIR
GRAEAAALAEEGRRARQQALSFETLLLDPPSYNTPPAHSHAAMRSTGGGG
RAWAADTGYGAGMHGGGGAGAARGSNALLQVCMLPIDGLADMLRRAFF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018961DnaJ_homolog_subfam-C_membr-28