Trimin1|350644|estExt_Genemark1.C_Ctg_680048 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|350644
Unique Name	Trimin1\|350644\|estExt_Genemark1.C_Ctg_680048
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	308

Homology

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BLAST of jgi.p|Trimin1|350644 vs. uniprot
Match: A0A835YLP2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP2_9STRA)

HSP 1 Score: 503 bits (1296), Expect = 2.260e-178
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0

Query:    1 MEVTAGQVAGDGGAELHAHGLAAIIAAALVTLCXXXXXXXXXXXXXLRPPPERCASPYGSSAVCFSSPPARRAMPARDATLRHREPFEHDASGGSYDPCEYAASDGGDSYASSPPRSSSRRSAGAAATPGSKGSRNRLSVFFPRHRLSCLAMDMVEGASAHAQQPMPXXXXXXXXPWPGSCGSSGGSRRRSTRKSMRRSIVAPGLGTASPPFGADGSSXXXXXXXXXGEAADPLGRKWTMEAVHHEYPHEVELRFARKSQRNTPGSGXXXXXXXXXXXXXKETRKASHVSDLGTAQVWLSGVSVDGC 307
            MEVTAGQVAGDGGAELHAHGLAAIIAAALVTLCXXXXXXXXXXXXXLRPPPERCASPYGSSAVCFSSPPARRAMPARDATLRHREPFEHDASGGSYDPCEYAASDGGDSYASSPPRSSSRRSAGAAATPGSKGSRNRLSVFFPRHRLSCLAMDMVEGASAHAQQPMPXXXXXXXXPWPGSCGSSGGSRRRSTRKSMRRSIVAPGLGTASPPFGADGSSXXXXXXXXXGEAADPLGRKWTMEAVHHEYPHEVELRFARKSQRNTPGSGXXXXXXXXXXXXXKETRKASHVSDLGTAQVWLSGVSVDGC
Sbjct:    1 MEVTAGQVAGDGGAELHAHGLAAIIAAALVTLCXXXXXXXXXXXXXLRPPPERCASPYGSSAVCFSSPPARRAMPARDATLRHREPFEHDASGGSYDPCEYAASDGGDSYASSPPRSSSRRSAGAAATPGSKGSRNRLSVFFPRHRLSCLAMDMVEGASAHAQQPMPXXXXXXXXPWPGSCGSSGGSRRRSTRKSMRRSIVAPGLGTASPPFGADGSSXXXXXXXXXGEAADPLGRKWTMEAVHHEYPHEVELRFARKSQRNTPGSGXXXXXXXXXXXXXKETRKASHVSDLGTAQVWLSGVSVDGC 307

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350644 vs. uniprot

BLAST of jgi.p|Trimin1|350644 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YLP2_9STRA	2.260e-178	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_68	contig	Contig_68:333323..334991 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350644	mRNA_8487	Tribonema minus UTEX_B_3156	mRNA	Contig_68 333323..334991 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|350644|estExt_Genemark1.C_Ctg_680048 ID=Trimin1|350644|estExt_Genemark1.C_Ctg_680048|Name=jgi.p|Trimin1|350644|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=308bp
MEVTAGQVAGDGGAELHAHGLAAIIAAALVTLCALLSALLAALRALLRPP
PERCASPYGSSAVCFSSPPARRAMPARDATLRHREPFEHDASGGSYDPCE
YAASDGGDSYASSPPRSSSRRSAGAAATPGSKGSRNRLSVFFPRHRLSCL
AMDMVEGASAHAQQPMPPPLPLPPSPWPGSCGSSGGSRRRSTRKSMRRSI
VAPGLGTASPPFGADGSSGGGGGGGGAGEAADPLGRKWTMEAVHHEYPHE
VELRFARKSQRNTPGSGGGGGGGGAAAARRKETRKASHVSDLGTAQVWLS
GVSVDGC*