Trimin1|350636|estExt_Genemark1.C_Ctg_680037 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350636
Unique NameTrimin1|350636|estExt_Genemark1.C_Ctg_680037
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length744
Homology
BLAST of jgi.p|Trimin1|350636 vs. uniprot
Match: A0A835YQ46_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ46_9STRA)

HSP 1 Score: 924 bits (2388), Expect = 0.000e+0
Identity = 743/743 (100.00%), Postives = 743/743 (100.00%), Query Frame = 0
Query:    1 MKKGSKALAGLGFERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINGNHLLNFKANFQFLLLPGTSLEHRSFTNADVVVDWESVESVCLIQGEGGEXXXXXXXXXEAGWRCPICLEHPRCPRITRCGHGPFCAVCILRHLGGEPYRXXXXXXXXXXXXRLAGALLRAHKPPVAGQSASFVLLLRDKEELIPRGVDRWGGGSCTAWCPKEGQPAATFSRLVLAKPQQLLQRMATEDAELAAFREESLAGGDTEWLPYISQARALLVERRAQLSAKGALALSPTASPRANSAPRSAFFTKDGGNHGAERRSSRSPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDAEEYGSXXXXXXXAPGDAGGTRGEALHPPARFAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGCALPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDLANQLSDQREDAMLALRLATIDLDGPPPGASTAPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALFNGSTASFARVVGRAPNAVDDFPALGAAAXXXXXXXXXXAPARPASGAASPILAGAWGKQRLAPSXXXXXXXXGDAEGPAELALGTPATSGKKRGGKGKGGGKGQALFSNAGQRGGVGR 743
            MKKGSKALAGLGFERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINGNHLLNFKANFQFLLLPGTSLEHRSFTNADVVVDWESVESVCLIQGEGGEXXXXXXXXXEAGWRCPICLEHPRCPRITRCGHGPFCAVCILRHLGGEPYRXXXXXXXXXXXXRLAGALLRAHKPPVAGQSASFVLLLRDKEELIPRGVDRWGGGSCTAWCPKEGQPAATFSRLVLAKPQQLLQRMATEDAELAAFREESLAGGDTEWLPYISQARALLVERRAQLSAKGALALSPTASPRANSAPRSAFFTKDGGNHGAERRSSRSPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDAEEYGSXXXXXXXAPGDAGGTRGEALHPPARFAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGCALPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDLANQLSDQREDAMLALRLATIDLDGPPPGASTAPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALFNGSTASFARVVGRAPNAVDDFPALGAAAXXXXXXXXXXAPARPASGAASPILAGAWGKQRLAPSXXXXXXXXGDAEGPAELALGTPATSGKKRGGKGKGGGKGQALFSNAGQRGGVGR
Sbjct:    1 MKKGSKALAGLGFERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINGNHLLNFKANFQFLLLPGTSLEHRSFTNADVVVDWESVESVCLIQGEGGEXXXXXXXXXEAGWRCPICLEHPRCPRITRCGHGPFCAVCILRHLGGEPYRXXXXXXXXXXXXRLAGALLRAHKPPVAGQSASFVLLLRDKEELIPRGVDRWGGGSCTAWCPKEGQPAATFSRLVLAKPQQLLQRMATEDAELAAFREESLAGGDTEWLPYISQARALLVERRAQLSAKGALALSPTASPRANSAPRSAFFTKDGGNHGAERRSSRSPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDAEEYGSXXXXXXXAPGDAGGTRGEALHPPARFAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGCALPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDLANQLSDQREDAMLALRLATIDLDGPPPGASTAPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALFNGSTASFARVVGRAPNAVDDFPALGAAAXXXXXXXXXXAPARPASGAASPILAGAWGKQRLAPSXXXXXXXXGDAEGPAELALGTPATSGKKRGGKGKGGGKGQALFSNAGQRGGVGR 743          
BLAST of jgi.p|Trimin1|350636 vs. uniprot
Match: A0A6H5KXX5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX5_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.200e-38
Identity = 146/512 (28.52%), Postives = 197/512 (38.48%), Query Frame = 0
Query:  130 EAGWRCPICLEHPRCPRITRCGHGPFCAVCILRHLGGEPYRXXXXXXXXXXXXRLAGALLRAHKPPVAGQSASFVLLLRDKEELIP------RGVDRWGGGSCTAW-------------------CPKEGQPAATFSRLVLAKPQQLLQRMATEDAELAAFREESLAGGDTEWLPYISQARALLVERRAQLSAKGALALSPTASPRANSAPRSAFFTKDGGNHGAERRSSRSPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDAEEYGSXXXXXXXAPGDAGGTRG-EALHPPARFAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGCALPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDLANQLSDQ------------------------------------REDAMLALRLATIDLDGPPPGAS 579
            E  W CPICL  P  PR+T+CGHGPFC VCILRHL  E               +L  A  R  +P V G +AS +LL R++  L+P      +G      G  TA                    CP EG  +  FSRLV A P  L    A E   L +FR  S+A G+TEW+PYISQA+AL+  +  + ++    A++ TA+   +  P+     + GG  G+   SS  P                                                                                                      GD    G+   XXXX           E    P  F F+Q  DGQ AF+HPL MR LL++     G  LP  ++A +LEVET +L+ DLR+R  FLGHLP HC + F+E+D+++ +SD+                                    R D + A+R  T+DL GP PG +
Sbjct:  210 EGDWTCPICLGMPVAPRVTKCGHGPFCLVCILRHLNSEASARCPLCFDKMHRNQLRRAACRDVRPYVPGGTASLLLLRRERSSLVPVQSASDKGTASGVPGGATASNPAXXXXXXXXXXXXXXGVCPAEGDESERFSRLVRAAPSTLRDLAAAEHMALLSFRHSSIASGETEWVPYISQAQALVKAQLDRFASVPPTAITATAAT-GSLKPQERAAVRRGGALGSPEVSSTPPGTTSISAETPSHAGGGAQRVGADSSSPVGLEDGGGTTVGRGSGGSSSGSLMAAPEAAQLSAKGSSR------------------------------------GDKPSLGTTSSXXXXXXXXXXXXXXXEGSGGP--FRFFQSTDGQKAFLHPLDMRQLLDD--AERGLPLPPRIDAKVLEVETVKLTPDLRKRLPFLGHLPIHCDISFLEVDMSDFVSDETSRKFREETQKRERKRRSRAAQEARLKKEEARLEQDRADRIAAMRAFTVDLQGPTPGGA 680          
BLAST of jgi.p|Trimin1|350636 vs. uniprot
Match: D7FRK0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK0_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 2.200e-34
Identity = 159/516 (30.81%), Postives = 204/516 (39.53%), Query Frame = 0
Query:  130 EAGWRCPICLEHPRCPRITRCGHGPFCAVCILRHLGGEPYRXXXXXXXXXXXXRLAGALLRAHKPPVAGQSASFVLLLRDKEELIP------RGVDRWGGGSCTA----------------W------CPKEGQPAATFSRLVLAKPQQLLQRMATEDAELAAFREESLAGGDTEWLPYISQARALLVERRAQLSAKGALALSPTASPRANSA--PRSAFFTKDGGNHGAERRSSRSPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDAEEYGSXXXXXXXAPGDAGGTRGEALHPPARFAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGCALPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDLANQLSDQ------------------------------------REDAMLALRLATIDLDGPPPGAS 579
            E  W CPICL  P  PR+T+CGHGPFC VCILRHL GE               +L  A  +  +P V G +AS +LL R +  L+P      +G      G  TA                W      CP EG  +  FSRLV A P  L    A E   L +FR  S+A G+TEW+PYISQA+AL+   +AQL     +  +   +  A S   P+       GG       +S SPA                                     XXXXXXXXX                                  XX                    D    G+ XXXXXX                  F F+Q  DGQ AF+HPL MR LLE+     G  LP  ++A +LEVET +L+ +LR+R  FLGHLP HC + F+E+D+ + +SD+                                    R D + A+R  T+DL GP PG +
Sbjct:  212 EGDWTCPICLGVPVAPRVTKCGHGPFCLVCILRHLDGEASARCPLCFDKMQRNQLRRAACQDVRPYVPGGTASLLLLRRKRSSLVPVQSASDKGTASGVPGGATASIPGXXXXXXGAVDEGWAAAGGVCPAEGDGSERFSRLVRAAPSTLRDLAAAEQMALLSFRHSSIASGETEWVPYISQAQALV---KAQLDRFAGVPPTTITAKTATSGLKPQERTAVGRGGLV-----ASGSPA------------------VDATPPGTKSISAETPPHGXXXXXXXXXRRVDSAQRVEADSSSPVGLENGAGTTVGRGSGGSXXGSLVVAPEAAQPSAKGSXXSDKPSLGTRXXXXXXXXXXXXXXXXXXXXXXP-FRFFQSVDGQKAFLHPLDMRQLLED--AERGLPLPPRIDAKVLEVETVKLTPELRKRLPFLGHLPIHCDISFLEVDMLDLVSDETSRKFREDTQKRERKRRSRVAQEARLKKEEARLERDRADRIAAMRAFTVDLQGPTPGGA 698          
BLAST of jgi.p|Trimin1|350636 vs. uniprot
Match: A0A835ZED2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZED2_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.520e-30
Identity = 185/465 (39.78%), Postives = 206/465 (44.30%), Query Frame = 0
Query:  162 RHLGGEPYRXXXXXXXXXXXXRLAGALLRAHKPPVAGQSASFVLLLRDKEELIPRGVDRWGGGSCTAWCPKEGQPAATFSRLVLAKPQQLLQRMATEDAELAAFREESLAGGDTEWLPYISQARALLVERRAQLSAKGAL---ALSPTASPRANSAPRSAFFTKDGGNHGAERRSSRSPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDAEEYGSXXXXXXXAPGDAGGTRGEALHPPARFAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGC-----ALPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDLANQLSDQ------------------------------------REDAMLALRLATIDLDGPPPGASTAP 582
            +HLGGE  R            RLA A     + P AG  A+F LLLRDK +L                                     LLQR+  E+AEL AFRE SLA GDTEWLPY+++A ALL  RRA L   GAL   A +P A+PRA          K     G       SP                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                             GD E    XXXXXXX             H    +AFYQLEDGQ  F+HPLS   LLEEH  GG        LP  L A +LEVETFRL+++LRRRYAFLGHLPEHCS+ FVELDL   LS Q                                    RE    +LR AT+DL GPPPG+   P
Sbjct:   12 QHLGGEDSRRCPCCFDGVSRERLAPAAPLPLRAPRAGALATFTLLLRDKRDL-------------------------------------LLQRLEQEEAELLAFREASLASGDTEWLPYVTEACALLDARRAALV--GALPHAAAAPGATPRAR--------PKRAATEGV------SPPEVVAAAHKRAAPESCTGGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLVEAAP------------------------------------TGDTEREXXXXXXXXXXXXXXXXXXXRLPH----YAFYQLEDGQCGFLHPLSFVSLLEEH-CGGSAERAARGLPETLMARVLEVETFRLTRELRRRYAFLGHLPEHCSISFVELDLTQTLSQQTQDKYGADLQRRHKRRQAAXXXXXXXXXXXXXXXXXREALFSSLRTATVDLSGPPPGSPALP 382          
BLAST of jgi.p|Trimin1|350636 vs. uniprot
Match: A0A4D9CXT0_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXT0_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 4.180e-15
Identity = 153/516 (29.65%), Postives = 196/516 (37.98%), Query Frame = 0
Query:   78 KANFQFLLLPGTSLEHRSFTNADVVVDWESVESVCLIQGEGGEXXXXXXXXXEAGWRCPICLEHPRCPRITRCGHGPFCAVCILRHLGGE------PYRXXXXXXXXXXXXRLAGALLRAHKPPVAG----------------------QSASFVLLLRDKEELIPRGVDR-----------WGGGSCTAWCPKEGQPAATFSRLVLAKPQQLLQRMAT---EDAELAAFREESLAGGDTEWLPYISQARALLVERRAQLSAKGALALSPTASPRANSAPRSAFFTKDGGNHGAERRSSRSPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDAEEYGSXXXXXXXAPGDAGGTR--GEALHPPARFAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGCALPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDL 549
            + NF+ +L P     H +  +AD  +DWE V+ V L                     CPIC +HP   +ITRCGH  +CA C+LR+L  E      P                    L A  P                          +   F+LL R K  L PR V+            +G G       ++G     + R     P +  +++AT   E AEL A REES+     EW+P+I +A  +L  RR + +A+          PR          ++ G   G E  + R    XXXXXXX   XXX                      XXXXXXXXXXXXXXXXXX                                                D              P   G +   GE L   A   FYQLEDGQ AF+HPL+MRCL+ E G G    LP  +   +LE ET  L+ +LR RY FL HLP + SV  VEL L
Sbjct:   49 QTNFRLVLSPLVPPSHPALFDADSPMDWEHVDLVLL------------PSLIPTLPPCPICFDHPHAAQITRCGHH-YCAPCVLRYLEEEGCVRRCPMCLEHIHQSDLRPLEAWSPSLPASSPXXXXXXXXXXXXXXXXXXXXXXXXXEERVKFLLLARTKGSLTPRVVEGGXXXXXXXXTGYGEGVAAWGVKRKGAGPPDWLR-----PWRRKKKVATLTREAAELVAAREESVGVEGAEWIPFIDEALKMLDRRREKYAARR---------PRGQGLVEGPPESRAG--MGREDAAGRGXXXXXXXXXXPVGXXXPAQASTPRPSQRPRGHSEGTGGXXXXXXXXXXXXXXXXXXGEGGFSAACAADGFPFPMD-----------------------------DVPSAREDKACPSSPPASLGPSSLSGEGLDSQASH-FYQLEDGQLAFLHPLTMRCLMAEAG-GRHALLPRVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELAL 504          
BLAST of jgi.p|Trimin1|350636 vs. uniprot
Match: UPI001CF9DFB0 (RING finger protein 10 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CF9DFB0)

HSP 1 Score: 79.7 bits (195), Expect = 1.250e-11
Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0
Query:  473 FAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGCALPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDL 549
            + FYQ EDGQ+ F+HP+++RCL++E+G    C  P  + A ++E E F ++++LRRRY +LGHLP  C     EL L
Sbjct:  489 YYFYQAEDGQHMFLHPVNVRCLVKEYGSLENC--PECITAEVVETEGFSMTEELRRRYRYLGHLPLTCEFSICELAL 563          
BLAST of jgi.p|Trimin1|350636 vs. uniprot
Match: A0A485L4U1_9STRA (Aste57867_15595 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4U1_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.910e-11
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0
Query:  473 FAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGCA---LPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDLANQLS 554
            +AFYQL++G YA +HP+ MR +  E     G A    P  L+A +LE+E   ++ + R+R+ +L HLP HC V  VE+DLA  +S
Sbjct:  304 YAFYQLQNGHYAVLHPVCMRAMTREFSSDHGAADDPFPLELSAKVLEIEHIVMNDETRKRFRYLSHLPSHCDVFLVEVDLAGLVS 388          
BLAST of jgi.p|Trimin1|350636 vs. uniprot
Match: A0A6S7FWH5_PARCT (RING finger protein 10 (Fragment) n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FWH5_PARCT)

HSP 1 Score: 75.1 bits (183), Expect = 2.870e-10
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 0
Query:  473 FAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGCALPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDL 549
            + FYQ EDGQ+ F+HP++ RCL++E+G    C  P  +  NI+E+E    +++LRRR+ +L HLP  C  +  ELDL
Sbjct:  451 YYFYQAEDGQHIFLHPINARCLIKEYGSLEHC--PQTIAGNIVEMECHTQTEELRRRFRYLRHLPLTCEFVICELDL 525          
BLAST of jgi.p|Trimin1|350636 vs. uniprot
Match: A0A3L6VF43_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VF43_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.450e-10
Identity = 33/84 (39.29%), Postives = 53/84 (63.10%), Query Frame = 0
Query:  471 ARFAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGCALPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDLANQLS 554
            A ++FYQL++G  A +HPL +R L  E   G   + P  + A +LE+E   ++ D+RRR+ ++ HLP HC +  VE+DL+  +S
Sbjct:  162 APYSFYQLDNGHAAILHPLCLRALTRE--FGSTHSFPHTITATVLEIEHMVVTDDVRRRFRYMAHLPSHCDLFLVEVDLSPVVS 243          
BLAST of jgi.p|Trimin1|350636 vs. uniprot
Match: W4H9W9_9STRA (RING-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9W9_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 4.210e-10
Identity = 33/84 (39.29%), Postives = 53/84 (63.10%), Query Frame = 0
Query:  471 ARFAFYQLEDGQYAFMHPLSMRCLLEEHGLGGGCALPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDLANQLS 554
            A ++FYQL++G  A +HPL +R L  E   G   + P  + A +LE+E   ++ D+RRR+ ++ HLP HC +  VE+DL+  +S
Sbjct:  314 APYSFYQLDNGHAAILHPLCLRALTRE--FGSTHSFPHTITATVLEIEHMVVTDDVRRRFRYMAHLPSHCDLFLVEVDLSPVVS 395          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350636 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQ46_9STRA0.000e+0100.00RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5KXX5_9PHAE1.200e-3828.52RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRK0_ECTSI2.200e-3430.81RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835ZED2_9STRA1.520e-3039.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CXT0_9STRA4.180e-1529.65RING-type domain-containing protein n=1 Tax=Nannoc... [more]
UPI001CF9DFB01.250e-1145.45RING finger protein 10 n=1 Tax=Protopterus annecte... [more]
A0A485L4U1_9STRA1.910e-1142.35Aste57867_15595 protein n=1 Tax=Aphanomyces stella... [more]
A0A6S7FWH5_PARCT2.870e-1044.16RING finger protein 10 (Fragment) n=3 Tax=Paramuri... [more]
A0A3L6VF43_9STRA3.450e-1039.29Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W4H9W9_9STRA4.210e-1039.29RING-type domain-containing protein n=2 Tax=Aphano... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 135..175
e-value: 2.3E-6
score: 37.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 135..175
score: 10.999225
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 135..175
e-value: 3.5E-6
score: 26.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 128..185
e-value: 1.9E-8
score: 35.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 573..626
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 690..743
NoneNo IPR availableCDDcd16536RING-HC_RNF10coord: 135..176
e-value: 7.72096E-17
score: 72.5969
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 134..180
IPR039739RING-finger protein Mag2/Rnf10PANTHERPTHR12983RING FINGER 10 FAMILY MEMBERcoord: 30..736

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_68contigContig_68:268206..274338 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350636mRNA_8475Tribonema minus UTEX_B_3156 mRNAContig_68 268206..274808 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350636|estExt_Genemark1.C_Ctg_680037 ID=Trimin1|350636|estExt_Genemark1.C_Ctg_680037|Name=jgi.p|Trimin1|350636|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=744bp
MKKGSKALAGLGFERGGGGGFESNQQRLLMSSSGGSAGNSQPVARRRDKQ
EGRGGHSRASRQQQQQQIINGNHLLNFKANFQFLLLPGTSLEHRSFTNAD
VVVDWESVESVCLIQGEGGEGSGGGGGEGEAGWRCPICLEHPRCPRITRC
GHGPFCAVCILRHLGGEPYRRCPMCFDNVSCDRLAGALLRAHKPPVAGQS
ASFVLLLRDKEELIPRGVDRWGGGSCTAWCPKEGQPAATFSRLVLAKPQQ
LLQRMATEDAELAAFREESLAGGDTEWLPYISQARALLVERRAQLSAKGA
LALSPTASPRANSAPRSAFFTKDGGNHGAERRSSRSPARRGGKGRSGGGG
DGTQLGGSAAARWGDGGAPATPAAAAAGAASASAAALEGEHEGGGAAASV
AEGSDGGGAAAASGDAADVVEREGGGEEDGSSAAAAAGAGDAEEYGSGAV
AAAAAPGDAGGTRGEALHPPARFAFYQLEDGQYAFMHPLSMRCLLEEHGL
GGGCALPTALNANILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDLA
NQLSDQREDAMLALRLATIDLDGPPPGASTAPLSPPPDGGDAGSPGSGGG
DAAAAAAADSPSTSPPPPPPAPALFNGSTASFARVVGRAPNAVDDFPALG
AAAAAAAAAAVASAPARPASGAASPILAGAWGKQRLAPSPLLGGAGGGDA
EGPAELALGTPATSGKKRGGKGKGGGKGQALFSNAGQRGGVGR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR039739Mag2/Rnf10