mRNA_8482 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|169920
Unique Name	mRNA_8482
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A836C9X0_9STRA (DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X0_9STRA)

HSP 1 Score: 1345 bits (3482), Expect = 0.000e+0
Identity = 679/679 (100.00%), Postives = 679/679 (100.00%), Query Frame = 1

Query:    1 MPAPSACPSACGTPAPQTIYLLSQGHTAQPPPVPLPPRAPLLPLXXXXXXLVLQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGTREMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDDEEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFETLRAVTAESSDEPKAVTAVADDA 2037
            MPAPSACPSACGTPAPQTIYLLSQGHTAQPPPVPLPPRAPLLPLXXXXXXLVLQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGTREMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDDEEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFETLRAVTAESSDEPKAVTAVADDA
Sbjct:    1 MPAPSACPSACGTPAPQTIYLLSQGHTAQPPPVPLPPRAPLLPLXXXXXXLVLQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGTREMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDDEEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFETLRAVTAESSDEPKAVTAVADDA 679

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BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7S2WTQ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ7_9STRA)

HSP 1 Score: 702 bits (1812), Expect = 6.390e-243
Identity = 361/639 (56.49%), Postives = 455/639 (71.21%), Query Frame = 1

Query:  157 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGT--REMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSS-------------------------QDADDDEEKKELTQRKFE-----GSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFETLR 1977
            +++YKWWE   L  G+QW  LEHNG+ FP EY+PHGV L Y+G+++ L P+ EE+ATF+  VP DGPQLGD  T  +F  NFF+D+K+++   H +K  KF  CDF A+R H+++ RLIKKAAT+ E+ AAK EK+     +G A+VDGHLEK+GN + EPP LFRGRGKHP  GK+K+R  P +VT+NIG+ AK+P CP PG AWG VQHD  V W++TW ENI   NKY ML+A SSFKGKSD  KY KAMRLKG I  IR +Y++ LNA     RQLATAMW+ID LALRVGGEKGEDEADTVGCC+LRVEH+ FG  G    ++ELEFLGKDSM +K+  DF+ YG++G +VF N  +FCK +KP +QV  ++DP  LN+HLQS+MPGL+AKVFRTYNASETLQ ++P+ +++K M+VQ KV+ YN ANR+VAILCNHQRTVS AM KS + L ER+A  K Q+ +L A LK  K GK K + +K    +                         Q     E  KEL QR+        SH+F+  PS EQL ++I+ W  K++K+++D+R+K+ NKEV+LGTSKINY DPRISVAWCKR EVPIER+F KTLRDKFVWAM VPPDW   FE LR
Sbjct:  154 MKSYKWWEHEDLPAGQQWRTLEHNGLCFPPEYKPHGVALKYEGKDLVLPPDLEELATFYGLVPDDGPQLGDPETRPIFQKNFFTDFKKALGGEHEIK--KFQGCDFSAIREHIEKERLIKKAATEVEKQAAKEEKQSLQFKYGYALVDGHLEKIGNTMAEPPSLFRGRGKHPLMGKVKQRVLPEQVTINIGKNAKIPVCPQPGHAWGAVQHDNTVTWMATWHENILGKNKYVMLAAQSSFKGKSDRGKYEKAMRLKGCIGKIRADYKKNLNAKDIFSRQLATAMWVIDILALRVGGEKGEDEADTVGCCSLRVEHIKFGQEGQGPHDIELEFLGKDSMQYKETTDFSRYGEVGIQVFQNFVSFCKKKKPDQQVLDQLDPPELNRHLQSIMPGLTAKVFRTYNASETLQNEVPTPESMKGMSVQQKVLMYNEANRKVAILCNHQRTVSKAMEKSMDTLHERLALFKRQKNELSAMLKAVKSGKTKDVKVKKETDALEEAKNXXXXXXXXXXXXVTPEQKIQATKATEAAKEL-QRQARLTVAGSSHLFSRVPSAEQLTKRIDQWIEKIRKLQLDIRNKDDNKEVALGTSKINYCDPRISVAWCKRCEVPIERVFPKTLRDKFVWAMFVPPDW--SFEALR 787

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BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7S3XV41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV41_HETAK)

HSP 1 Score: 701 bits (1808), Expect = 2.220e-241
Identity = 363/671 (54.10%), Postives = 460/671 (68.55%), Query Frame = 1

Query:  151 LVLQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFD----KCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGTRE----MELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPL-----------------KGRGSSQDADDDEEKKELTQR--------------KFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFETLRAVTAESSDEPKAVT---AVADDA 2037
            L ++A+KWWE P L  G  W +LEHNG+ FP E++ HG+ L+Y+GE ++LSPE EE+AT +A +P DGPQLGD AT  +F  NF+SD+K+ +    P K   FD    K DF  ++ +L Q++++KK  TD ER   K EKE    L G AIVDGHLE+VGN +MEPPGLFRGRGKHPKTG  K+R +P +VT+NIGE A+ P+CP+PG AW NVQHDP V W++TW ENI   NKY  L+ASSSFKGKSD +KYNKA  LKG+I+ IR +Y + L   +   RQ+ATAMW+ID LALRVGGEKGEDEADTVGCC+LRVEH+ F  +G       +ELEFLGKDSMLFKQ IDF  YG +G +VF NL  FC+ +K +E VF ++ PT LN+HL SLMPGLSAKVFRTYNA+ETLQ +LP  +A+  +TVQ KVV YN ANR+VAILCNHQRTVS A     EN+ ER+  +K QR +LK   +L K GK K++PL                 K +     A   EEKK   +               K   SH+F   PS +Q++ ++  W  K+ K+++D++D+++NKEV+LGTSKINYMDPR+SVAWCK NEVPIE+IFAKTLRDKF WA  VPPDWRF+   L+ V  +  +   AV    AVA +A
Sbjct:  182 LAMKAFKWWEAPELEEGILWRYLEHNGIIFPPEHKVHGIKLLYEGEPLDLSPEQEELATLYAAMPDDGPQLGDPATRPIFQKNFWSDFKQVLDPKGPWKGKNFDVAFKKFDFSLIKEYLNQQKILKKTQTDSERQKTKDEKEAAVLLHGYAIVDGHLERVGNMMMEPPGLFRGRGKHPKTGLFKRRVFPGQVTINIGENARPPKCPLPGHAWMNVQHDPTVTWMATWNENIMGSNKYVQLAASSSFKGKSDRDKYNKAATLKGYINKIREDYGQNLWKKSHRPRQIATAMWIIDVLALRVGGEKGEDEADTVGCCSLRVEHLRFDTSGDEARKYTLELEFLGKDSMLFKQEIDFGKYGKVGRRVFKNLVEFCQKKKRSEDVFDQLTPTILNQHLSSLMPGLSAKVFRTYNATETLQNELPKPEAMAGLTVQEKVVLYNAANRKVAILCNHQRTVSHAAAAQLENVNERLDLLKVQRKELKDIYRLLKAGKHKRVPLQSDRGKEKVAAAAARLKKAKDLKAAASTVEEKKHAIEYEEKAKAKRVAAMKIKQSESHLFVKMPSTKQVKGRVIAWGQKIAKLKLDIKDRDENKEVALGTSKINYMDPRVSVAWCKTNEVPIEKIFAKTLRDKFNWAFAVPPDWRFEAPLLQKVEEDDDESDTAVDDTDAVASEA 852

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BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A4D9D5J1_9STRA (TOPEUc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5J1_9STRA)

HSP 1 Score: 685 bits (1767), Expect = 6.370e-235
Identity = 365/644 (56.68%), Postives = 452/644 (70.19%), Query Frame = 1

Query:  157 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTG--HPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTS-EMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGP----------AGTREMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKI-----------PLKGRGSSQD----ADDDEEK----------KELTQR----KFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFD 1962
            ++A+KWW++ PL  G QW  LEHNG+ FP +Y PHGV ++YDG+E+EL  + EE+ATFFA +P DGPQLG   T K+F  NFF  +KE +       L    FDKCDF  +RAHL+ +++IKKAAT  E+A  KA KE R   +G AIVDG +EKVGNF MEPPGLFRGRG HP  G +K+R  P  + VN+G +A+VP CP+PG AW  VQHD  V WL++WKEN+ N  KY ML+ASSSFKGKSDMEKY+KA RLK  I  IRR+YE  L      E +Q+ATAMW+IDKLALRVGGEKGEDEADTVGCC+LR+EH+ F P          A   E+ELEFLGKDSMLFKQ IDF +YG+ G +VF NL  F K +KP + VF+ + P+ LN HL SLMPGLSAKVFRTYNASETLQ +LP+ + L  M+V  KVV YN+ANR+VAILCNHQRTV+  M  +  NL ER+  +K+Q+ +L    +L K GK  KI            +K    ++D    A   EEK          KEL ++    K + +H+FA  P++EQ+ RKIE W  K+ K+E+D+R+K++NKEV+LGTSKINYMDPRISVAWCKR EVPIERIFAKTLRDKFVWAM VPP WRF+
Sbjct:  221 MKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPVDDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPDQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELPTVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMEKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRFE 864

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BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: B5Y3I3_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3I3_PHATC)

HSP 1 Score: 661 bits (1705), Expect = 1.300e-229
Identity = 343/615 (55.77%), Postives = 436/615 (70.89%), Query Frame = 1

Query:  157 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDE-ADTVGCCTLRVEHMTFGPAG----TREMELEFLGKDSMLFKQNIDF--TAYGD---IGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSAD---ALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDDEEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFD 1962
            +Q++ WW  P L  G QW  +EH+G+SFP+ YEPHGV +MYDG+ +EL+P  EE ATFFA +  +G  LG+  T K+F  NFF+D++E +   H +K  +F KCDF  +R HL ++++I+KA TD ER A K ++ +  H FG +IVDGH+E+VGNF MEPPG FRGRG+HPK GKLK R  P +V++N+ E A VP CPVPG AW +V+HDP   WL+TWKENINN +KY  L+A SSFKGKSD  KY+KA  L  +I+ IR++Y++ L +   E++QLATA W+ID+LALRVGGEK  DE ADTVGCC+LRVEH+ F P G    ++E+ELEFLGKDSMLFKQ IDF  T Y D   +G++V+DNL +FCK +K +E+VF  I+PT LN HL+  M GLSAKVFRTYNAS+TLQ +L   +   A +N+T   KVVEYNNANREVAILCNHQR+VS A     EN+  +V  +K+Q+ DLK  LKL   G+A KIP K                              T ++EQ+ +KIE W  K+ KME+DL+ K+ NKEVSLGTSKINYMDPRISVAWCKRNEVPIE+IF+KTLRDKF WAM V PDW F+
Sbjct:    1 MQSFLWWNAPELPEGCQWRTMEHSGVSFPETYEPHGVKMMYDGQPVELTPIQEEAATFFAAMDPEGMHLGNPKTGKIFIKNFFADFREILGKKHIVK--EFKKCDFEPIRKHLNEQKIIRKAITDEERKANKEDRSQTLHQFGFSIVDGHIERVGNFNMEPPGAFRGRGEHPKMGKLKSRVLPEQVSLNLSECAPVPPCPVPGHAWSDVRHDPRGQWLATWKENINNQSKYMQLAAQSSFKGKSDRSKYSKAGLLCKNIEKIRKSYKKDLKSKDMEVKQLATATWVIDRLALRVGGEKDTDEEADTVGCCSLRVEHLHFDPNGEGGDSKEIELEFLGKDSMLFKQTIDFGATLYNDSNGLGAQVYDNLKSFCKKKKSSEEVFHVINPTMLNNHLKQFMDGLSAKVFRTYNASKTLQTELRKYEVSPAWRNLTASEKVVEYNNANREVAILCNHQRSVSKAQETQLENITAKVGMLKKQKKDLKKILKLLTAGEADKIPTK--------------------------KSPQTMTDEQVVKKIEAWNGKISKMEMDLKHKDDNKEVSLGTSKINYMDPRISVAWCKRNEVPIEKIFSKTLRDKFNWAMAVVPDWEFN 587

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BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7R9YDN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDN3_9STRA)

HSP 1 Score: 664 bits (1713), Expect = 1.300e-228
Identity = 342/633 (54.03%), Postives = 441/633 (69.67%), Query Frame = 1

Query:  157 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGTREMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWL-KLAKDGKAKKIPLKGRGSSQDADD--------------------------DEEKK---ELTQRKFEGSHMFANTPSE-EQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFD 1962
            ++A+KWWE P    G QW  LEH G++FP +Y PH  P+ YDG ++ L+   EE+AT++AD+PLDGPQLGD   A  F+ NF SD+++ +   H +++  FDK  +  +R +   ++L+K++ATD E+A  KA+K      FG A+VDGHLEKVGNF +E PGLFRGRGKHPKTGK+K+R  P ++T+N GE A  P CP+PG AWG VQHD  V WL TW+ENI   NKY ML+A SS KGKSD +KY KA +LKGHI+AIRRNY  GL + +   RQ+ATAMWLID  ALRVGGEKGEDEADTVGCC+LR+EH TF      +++LEFLGKDSM FKQ IDF+ YGDIG KV  NL  F +G++ +E VF +++PT LN HLQS+MPGL+AKVFRTYNASETLQ +LP A+ ++ +TV  KVV+YN ANR+VAILCNHQ+TVS A  +  + L +++  +K Q+ +L A   KLAK G+ K I L    + Q + D                          DE KK   E    KF  +H+F   PS+  ++  +I  WT K++KME+ LR+K  NKEV+LGTSKINYMDPRI+VAWCKR E+PIER+FAK LR+KF WAM VPPDW+F+
Sbjct:  109 MKAFKWWEHPDHPEGIQWRQLEHAGVAFPPDYVPHNTPITYDGRDIALNAAAEEVATWYADLPLDGPQLGDPEWAPTFNKNFMSDFRKVLGDRHAIRS--FDKISWTGLRNYTASKKLVKRSATDDEKAKVKADKLATRSRFGFALVDGHLEKVGNFTIELPGLFRGRGKHPKTGKIKERIPPEQLTLNFGENAPPPICPIPGHAWGAVQHDQSVTWLVTWRENIMEANKYVMLAAMSSLKGKSDRDKYAKAAKLKGHIEAIRRNYRTGLQSKSGGDRQIATAMWLIDIYALRVGGEKGEDEADTVGCCSLRLEHFTFHEDSESQVDLEFLGKDSMRFKQTIDFSTYGDIGMKVLRNLKEFMRGKRKSEDVFDRLNPTILNNHLQSIMPGLTAKVFRTYNASETLQNELPDAEDMEGLTVPEKVVQYNEANRKVAILCNHQKTVSSAAQEGLDALAKKLEDLKSQKRELVAIKNKLAK-GETKGIRLSTENAIQASADAAKARADRLRNSAKTDEERIAATKATDESKKLRREAAAVKFSQAHLFKQIPSDVSKVTSRINKWTEKIQKMELQLRNKTDNKEVALGTSKINYMDPRITVAWCKRVELPIERVFAKALREKFNWAMAVPPDWKFE 738

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BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7S3PD47_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD47_9STRA)

HSP 1 Score: 662 bits (1708), Expect = 1.260e-227
Identity = 342/647 (52.86%), Postives = 454/647 (70.17%), Query Frame = 1

Query:  157 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDE-ADTVGCCTLRVEHMTFGPAG----TREMELEFLGKDSMLFKQNIDFTAY-----GDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADAL---KNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDD--------------------------------EEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFD 1962
            +QA+ WWE P LA G  WS +EH+G+SFP+EYEPHGV ++YDG+ ++L+P  EE ATFFA +  DG  LG+  TA +F  NFF+D++E +   H +K+  F KCDF  +R HL ++++I+KA +D ER A K ++ +  H +G A+VDGH+E+VGNF MEPPG FRGRG+HPK GKLK R  P +V++N  E A +P CPVPG AWG+V+HDP   WL+TWKENIN  +KY  L+A SSFKGKSD  KY+KA  L  +I  IR++Y++ L +  +E +QLATA W+ID+LALRVGGEK  DE ADTVGCC+LRVEH+ F P G     +E+ELEFLGKDSMLFKQ IDF +      G  G+K+++NL +FCK +K +++VF KI+PT LN HL+  M GLSAKVFRTYNAS TLQQ+L   +A    + +T   KVVEYN+ANREVAILCNHQR+VS A     EN+GE++A +K+Q+ +LK  LK   +   K IP   R S +  +DD                                +++++L  +KF  +H++   P+ +Q++++IE WT K+ KME+DL+ K+ NKEVSLGTSKINYMDPRISVAWCKRNEVPIE++F+KTLRDKF WAM VPP+W F+
Sbjct:  110 MQAFLWWEAPVLAEGMNWSTMEHSGVSFPEEYEPHGVKMLYDGQPVDLTPAQEEAATFFAAMDPDGMHLGNPKTAPIFIKNFFADFREILGKKHIIKD--FKKCDFEPIRKHLNEQKIIRKAISDKERQANKEDRNQTLHKYGYAVVDGHIERVGNFNMEPPGAFRGRGEHPKMGKLKSRVSPEQVSLNCSECAPIPACPVPGHAWGDVRHDPRGQWLATWKENINGQSKYMQLAAQSSFKGKSDRSKYSKAALLCKYIHDIRKSYKKDLKSKDTETKQLATATWIIDQLALRVGGEKDTDEEADTVGCCSLRVEHLHFDPNGEGDENKEIELEFLGKDSMLFKQTIDFGSALYNDNGGHGTKIYENLKSFCKKKKSSDEVFDKINPTLLNAHLKKFMDGLSAKVFRTYNASITLQQELRKHEAAAGWERLTPAEKVVEYNSANREVAILCNHQRSVSKAQETQLENIGEKIATLKKQKKELKGMLKKLINND-KDIPT--RKSFKAMEDDVKTALAKAKEMKDKAKXXXXXXXXXXXXXXXXQQRRDLADKKFRRAHLWEKPPTTDQVKKRIENWTAKINKMELDLKHKDDNKEVSLGTSKINYMDPRISVAWCKRNEVPIEKVFSKTLRDKFNWAMAVPPEWEFN 751

[Close]

BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7S2CY07_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY07_9STRA)

HSP 1 Score: 664 bits (1714), Expect = 1.670e-227
Identity = 346/637 (54.32%), Postives = 435/637 (68.29%), Query Frame = 1

Query:  157 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFG--PAGTREMELEFLGKDSMLFKQNIDF--TAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDDEEKKELTQRKFE--------------------------------GSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRF 1959
            ++A+KWWE   L  G QW  +EHNG++FP EYEPHGVPL+Y GE +ELSPE EE+ATF+A VP DGPQLGD  T  +F  NFF+D+K+ +   H ++  +F  CDF  + A++ ++++I KAATD E+A  K EKE     +G AIVD HLE+VGN + EPP LFRGRGKHP  GK+K+R    +V++N+ E   VP+CP PG AWG VQHD  V WL+TW ENI   NKY ML+A SSFKGKSD +KY KAM+LKG I  IR +Y++ L+A     RQLATAMW+ID LALRVGGEKG+DEADTVGCC+LRVEH+  G    G  E+ELEFLGKDSML+K+  DF    YGD G KV+ NL  FCKG+K  +QV   ++P  LN+HLQ+LMPGL+AKVFRTYNASETLQ +LPS   L+  TV  KV+ YN ANR+VAILCNHQRTVS AM  +   LGER+  ++ Q+ +L + LK  K G   K   K +   + A DD                                            GSH+FA  PSEEQ++++I+ W  K++K+E+D+R+K+ NKEV+LGTSKINY DPRI+VAW KR EVP+ER+F KTLRDKFVWAM VPPDW F
Sbjct:  192 MKAFKWWEHEDLPDGVQWLGMEHNGLAFPPEYEPHGVPLLYKGEPIELSPELEELATFYAAVPDDGPQLGDPETRTIFQKNFFTDFKKMLGKSHKVQ--EFKHCDFSRIAANIAEQKMINKAATDVEKANKKREKEELQFKYGFAIVDKHLERVGNTMCEPPSLFRGRGKHPLMGKVKQRCTTEQVSLNLAETTTVPRCPQPGHAWGAVQHDNSVTWLATWHENILGKNKYVMLAAQSSFKGKSDRDKYLKAMKLKGSIKKIRADYKKNLDAKDKFSRQLATAMWVIDVLALRVGGEKGDDEADTVGCCSLRVEHLHCGLPEQGPHEIELEFLGKDSMLYKETTDFGREEYGDTGKKVYKNLIQFCKGKKQEQQVLDLLNPPELNRHLQTLMPGLTAKVFRTYNASETLQNELPSPSDLQGKTVPEKVLAYNEANRKVAILCNHQRTVSKAMQTNMSVLGERLKLLQRQKVELGSLLKQIKKGGNIKSSQKSKDMGKQAVDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAAAGSHLFAKVPSEEQVKKRIDVWREKIRKLELDIRNKDDNKEVALGTSKINYCDPRITVAWLKRTEVPVERVFPKTLRDKFVWAMPVPPDWSF 826

[Close]

BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7S2YPG0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YPG0_9STRA)

HSP 1 Score: 660 bits (1702), Expect = 7.280e-227
Identity = 348/648 (53.70%), Postives = 452/648 (69.75%), Query Frame = 1

Query:  157 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDE-ADTVGCCTLRVEHMTFGP----AGTREMELEFLGKDSMLFKQNIDFTAY------GDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQL---PSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDD--------------------------------EEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFD 1962
            +QA+ WWE P LA G  WS +EH G+SFP++YEPHGV ++Y+G  ++L+P  EE ATFFA +  DG  LG+  TA +F  NFF+D+K  +   H ++  KF+KCDF  +R HL ++++I+KA TD E+ A K ++ +  H FG AIVDGH+E+VGN+ MEPPG FRGRG+HPK GKLK R  P +V++N+ E A VP+CPVPG AWG+V+HDP   WL+TWKENIN  +KY  L+A SSFKGKSD  KY+KA  L  +I  IR++Y++ L     E RQLATA W+ID+LALRVGGEK  DE ADTVGCC+LRVEH+TF P       +E+ELEFLGKDSMLFKQ IDF A       G +G++VF+NL AFCK +K  E+VF  I+PT LN HL+  M GL+AKVFRTYNAS+TLQ++L    ++    N++   KVV+YNNANREVAILCNHQR+VS A     E++G ++A +K+QR  LKA  +    G +  IPL  R SSQ  D+D                                ++K++L Q KFE +H++   PS++Q++++I  WT K+ KME+DL+ K+ NKEVSLGTSKINYMDPRISVAWCKRNEVPIE+IF+KTLRDKF WAM V PDW F+
Sbjct:   99 MQAFLWWEAPVLAEGVNWSTMEHAGVSFPEDYEPHGVKMLYNGTPVDLTPAQEEAATFFAAMDPDGMHLGNPKTAPIFIKNFFADFKGILGRQHVIQ--KFEKCDFSPIRQHLNEQKMIRKAITDDEKKANKEDRNQVLHRFGFAIVDGHIERVGNYNMEPPGAFRGRGEHPKMGKLKSRVAPEQVSMNLSECAAVPKCPVPGHAWGDVRHDPRGQWLATWKENINGQSKYMQLAAQSSFKGKSDRSKYSKAGLLCKYITKIRKSYKKDLKNKNVETRQLATATWVIDRLALRVGGEKDTDEEADTVGCCSLRVEHLTFDPNDEGIDNKEIELEFLGKDSMLFKQTIDFGAEMYNQGEGGLGNQVFENLKAFCKKKKKTEEVFHAINPTMLNAHLKQFMDGLTAKVFRTYNASKTLQEELRKHETSPLWANLSATEKVVQYNNANREVAILCNHQRSVSKAQETQLESIGVKLATLKKQRKQLKAIGRKLVAGDSD-IPL--RKSSQAMDEDVKAALAKAKRMKEAATTKEQKIKATEADEKAKQKKRDLAQAKFEKAHLWEKVPSQDQVKKRIVAWTAKVAKMELDLKHKDDNKEVSLGTSKINYMDPRISVAWCKRNEVPIEKIFSKTLRDKFNWAMAVSPDWEFN 741

[Close]

BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7S4VCD4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VCD4_9STRA)

HSP 1 Score: 656 bits (1692), Expect = 1.480e-225
Identity = 350/647 (54.10%), Postives = 442/647 (68.32%), Query Frame = 1

Query:  157 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDE-ADTVGCCTLRVEHMTFGPAGTR----EMELEFLGKDSMLFKQNIDFTA--YGD---IGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADAL---KNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLK----------------GRGSSQDADDDEEKKELTQR--------------KFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFE 1968
            +QA+ WW       G QW  +EH G+SFP+ Y PHGV ++YDG+E+ LSP +EE ATFFA +  DG  LG+  TA +F  NFF+D+++ + T H +K+ K  KCDF  +R HL ++++IKKA TD ER   K ++      FG AIVDGH+EKVGN+ MEPPG FRGRG+HPK GKLK+R  P +V +N+ E ++VP C VPG AWG+V+HDP V WLS WKENINN  KY  L+A SSFKGKSD  KYNKA  L  +ID IR +Y++ L + + E +QL TAMW+ID+LALRVGGEK  DE ADTVGCC+LRVEH+ F P G      E+ELEFLGKDSMLFKQ IDF A  Y D   +G+ V+ N   FCK +KP++ VF  + PT LN HL+ +M GL+AKVFRTYNAS+TLQ +L   + L   K +T   KVVEYNNANREVAILCNHQR+VS A     EN+G ++AK+KEQ+  LKA LK    G+ K IP+K                 +   + A  +EEK E T+               KF  +H++   P+ +Q+ ++I  WT K+ KME+DL+ K+ NKEVSLGTSKINYMDPRISVAWCKRNEVPIE+IF+KTLRDKF WAM VPPDW F+ E
Sbjct:   83 MQAFLWWNASEPPEGCQWDTMEHAGVSFPEPYVPHGVKMLYDGKEVYLSPVEEEAATFFAAMDPDGMHLGNPKTAPIFIKNFFADFRKILGTKHVIKDYK--KCDFEPIRVHLNEQKIIKKAITDEERKMNKDQRNEAMFKFGYAIVDGHIEKVGNYNMEPPGAFRGRGEHPKMGKLKQRVAPEQVQLNMSECSRVPPCIVPGHAWGDVRHDPQVQWLSQWKENINNQVKYMQLAAQSSFKGKSDRSKYNKAALLCENIDKIRDSYKKKLKSKSLETKQLGTAMWVIDRLALRVGGEKDTDEEADTVGCCSLRVEHLHFDPNGEGGDNCEIELEFLGKDSMLFKQTIDFGAAMYNDDNGMGTTVYQNFKTFCKKKKPSQDVFDSLTPTALNAHLKEIMEGLTAKVFRTYNASKTLQDELRKTEDLVSWKRLTAAEKVVEYNNANREVAILCNHQRSVSKAQETQLENIGAKLAKLKEQKKVLKAILKRLNKGETKGIPIKKNEKKMVEAANNAVAKAKKMKEKAKTNEEKIEATEADQAAKQQKRDAADYKFTQAHLWEKVPTADQVIKRITAWTAKISKMEMDLKHKDDNKEVSLGTSKINYMDPRISVAWCKRNEVPIEKIFSKTLRDKFNWAMAVPPDWEFNAE 727

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|169920 vs. uniprot

BLAST of jgi.p|Trimin1|169920 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836C9X0_9STRA	0.000e+0	100.00	DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=...	[more]
A0A7S2WTQ7_9STRA	6.390e-243	56.49	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S3XV41_HETAK	2.220e-241	54.10	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A4D9D5J1_9STRA	6.370e-235	56.68	TOPEUc domain-containing protein n=2 Tax=Monodopsi...	[more]
B5Y3I3_PHATC	1.300e-229	55.77	Predicted protein n=3 Tax=Phaeodactylum tricornutu...	[more]
A0A7R9YDN3_9STRA	1.300e-228	54.03	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A7S3PD47_9STRA	1.260e-227	52.86	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
A0A7S2CY07_9STRA	1.670e-227	54.32	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2YPG0_9STRA	7.280e-227	53.70	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A7S4VCD4_9STRA	1.480e-225	54.10	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_68	contig	Contig_68:301585..310926 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|169920\|e_gw1.68.95.1
BRITE	ko00000,ko01000,ko03032
KEGG ko	ko:K03163
EC	5.99.1.2
Description	DNA Topoisomerase I (eukaryota)
COG category	L
Max annot lvl	2836\|Bacillariophyta
EggNOG OGs	COG3569@1\|root,KOG0981@2759\|Eukaryota,2XANY@2836\|Bacillariophyta
Evalue	2.13e-230
Seed ortholog	2850.Phatr13384
Hectar predicted targeting category	other localisation
TranscriptId	170242
Track	FilteredModels1
ProteinId	169920

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|169920	gene_8482	Tribonema minus UTEX_B_3156	gene	Contig_68 301585..310926 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|169920	Trimin1\|169920\|e_gw1.68.95.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_68 301585..310926 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_8482_10	exon_8482_10	Tribonema minus UTEX_B_3156	exon	Contig_68 301585..301887 -
exon_8482_9	exon_8482_9	Tribonema minus UTEX_B_3156	exon	Contig_68 302280..302426 -
exon_8482_8	exon_8482_8	Tribonema minus UTEX_B_3156	exon	Contig_68 303839..304072 -
exon_8482_7	exon_8482_7	Tribonema minus UTEX_B_3156	exon	Contig_68 304552..304710 -
exon_8482_6	exon_8482_6	Tribonema minus UTEX_B_3156	exon	Contig_68 305280..305495 -
exon_8482_5	exon_8482_5	Tribonema minus UTEX_B_3156	exon	Contig_68 305917..306057 -
exon_8482_4	exon_8482_4	Tribonema minus UTEX_B_3156	exon	Contig_68 306876..307043 -
exon_8482_3	exon_8482_3	Tribonema minus UTEX_B_3156	exon	Contig_68 307832..308011 -
exon_8482_2	exon_8482_2	Tribonema minus UTEX_B_3156	exon	Contig_68 308961..309161 -
exon_8482_1	exon_8482_1	Tribonema minus UTEX_B_3156	exon	Contig_68 310567..310926 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_8482	CDS_8482	Tribonema minus UTEX_B_3156	CDS	Contig_68 310567..310926 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_68:301585..310926-
coding sequence from alignment at Contig_68:301585..310926-

spliced messenger RNA

>mRNA_8482 ID=mRNA_8482|Name=jgi.p|Trimin1|169920|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2109bp|location=Sequence derived from alignment at Contig_68:301585..310926- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGGCGCCCTCCGCTTGTCCAAGCGCGTGCGGCACGCCCGCACCGCA
AACTATCTACCTACTCTCGCAAGGGCACACGGCTCAGCCCCCCCCCGTCC
CCCTCCCCCCGCGCGCGCCACTGCTGCCGCTGCCGCTGCTGCCGCTGCCG
CTGGTGCTGCAGGCGTACAAATGGTGGGAGGAGCCGCCGCTCGCGCCGGG
GCGCCAGTGGAGCCACCTGGAGCACAACGGCATGTCGTTCCCGGACGAGT
ACGAGCCGCACGGCGTGCCGCTCATGTACGACGGGGAGGAGATGGAGCTG
TCGCCGGAGGACGAGGAGATTGCCACGTTCTTTGCGGACGTGCCACTGGA
CGGCCCGCAGCTCGGCGACGCCGCCACCGCCAAGGTCTTCAGCGCCAACT
TCTTCAGCGACTGGAAGGAGTCCATGCCGACGGGGCACCCCCTCAAGAAC
GCCAAGTTCGACAAGTGCGACTTCGGCGCGATGCGCGCGCACCTGCAGCA
GCGCCGCCTCATCAAGAAGGCGGCCACGGACGGGGAGCGCGCCGCTGCCA
AGGCGGAGAAGGAGCGTCGCTTCCACCTGTTTGGCCTCGCCATCGTGGAC
GGCCACCTGGAGAAGGTGGGCAACTTCATCATGGAGCCGCCGGGGCTGTT
CCGCGGCCGCGGCAAGCACCCCAAGACGGGCAAGCTGAAGAAGCGCGCGT
ACCCGTCGGAGGTCACCGTCAACATCGGCGAAGAGGCCAAGGTGCCACAG
TGCCCCGTGCCCGGCTTTGCGTGGGGCAACGTGCAGCACGACCCGGGCGT
CGCGTGGCTGTCGACGTGGAAGGAGAACATCAACAACATGAACAAGTACG
CCATGCTCAGCGCGAGCTCCTCATTCAAGGGCAAGAGCGACATGGAGAAG
TACAACAAGGCCATGCGCCTCAAGGGCCACATCGATGCCATCCGGCGCAA
CTACGAGCGCGGCCTCAACGCCAGCACCAGCGAGATGCGCCAGCTGGCGA
CGGCCATGTGGCTCATCGACAAGCTCGCGCTGCGTGTCGGCGGCGAGAAG
GGCGAGGACGAAGCGGACACGGTCGGTTGCTGCACGCTGCGCGTCGAGCA
CATGACGTTCGGCCCTGCCGGCACGCGCGAGATGGAGCTCGAGTTCCTGG
GCAAGGACTCCATGCTCTTCAAGCAGAACATTGACTTCACGGCGTATGGC
GACATTGGCAGCAAGGTCTTCGACAACCTCACGGCGTTCTGCAAGGGGCG
CAAGCCCGCCGAGCAGGTCTTCCAGAAGATCGACCCCACAACGCTCAACA
AGCACCTGCAGAGCCTCATGCCCGGCCTCAGCGCCAAGGTCTTCCGCACG
TACAACGCGAGCGAGACGCTGCAGCAGCAGCTGCCGAGCGCAGACGCGCT
GAAGAACATGACTGTGCAGGCCAAGGTTGTCGAGTACAACAACGCGAACC
GCGAGGTGGCCATCCTCTGCAACCACCAGCGCACGGTGAGCGGCGCCATG
CTGAAGTCGTTTGAGAACCTGGGCGAGCGCGTGGCTAAGGTCAAGGAGCA
GCGCGCGGACCTCAAGGCGTGGTTGAAGTTGGCGAAAGACGGCAAGGCCA
AGAAGATACCGCTCAAGGGGAGGGGCTCGTCGCAGGACGCCGACGACGAC
GAGGAGAAGAAGGAGCTCACGCAGCGCAAGTTTGAGGGCTCACACATGTT
TGCCAACACGCCGTCCGAGGAGCAGCTGCAGCGCAAGATAGAGGGCTGGA
CGACCAAGCTCAAGAAGATGGAGGTGGATCTGCGCGACAAGGAGCAGAAC
AAGGAGGTCTCCCTCGGCACAAGCAAGATCAACTACATGGACCCGCGCAT
CTCGGTCGCGTGGTGCAAGCGCAACGAGGTCCCCATCGAGCGCATCTTTG
CCAAGACGCTGCGCGACAAGTTTGTCTGGGCCATGAACGTGCCGCCGGAC
TGGCGCTTTGACTTTGAGACGCTGCGCGCGGTGACCGCGGAGTCGAGCGA
CGAGCCCAAGGCGGTTACGGCAGTCGCGGACGACGCTGACGCCAAGGCCA
AGGGCAAGGGCGATGACGATGAGGAAGAAGAAGAGGAGGAGGAGGAGGAG
ATGGATTAG

protein sequence of jgi.p|Trimin1|169920

>Trimin1|169920|e_gw1.68.95.1 ID=Trimin1|169920|e_gw1.68.95.1|Name=jgi.p|Trimin1|169920|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=703bp
MPAPSACPSACGTPAPQTIYLLSQGHTAQPPPVPLPPRAPLLPLPLLPLP
LVLQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMEL
SPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKN
AKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVD
GHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQ
CPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEK
YNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEK
GEDEADTVGCCTLRVEHMTFGPAGTREMELEFLGKDSMLFKQNIDFTAYG
DIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRT
YNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAM
LKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDD
EEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQN
KEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPD
WRFDFETLRAVTAESSDEPKAVTAVADDADAKAKGKGDDDEEEEEEEEEE
MD*

mRNA from alignment at Contig_68:301585..310926-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8482 ID=mRNA_8482|Name=jgi.p|Trimin1|169920|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9342bp|location=Sequence derived from alignment at Contig_68:301585..310926- (Tribonema minus UTEX_B_3156 )
ATGCCGGCGCCCTCCGCTTGTCCAAGCGCGTGCGGCACGCCCGCACCGCA
AACTATCTACCTACTCTCGCAAGGGCACACGGCTCAGCCCCCCCCCGTCC
CCCTCCCCCCGCGCGCGCCACTGCTGCCGCTGCCGCTGCTGCCGCTGCCG
CTGGTGCTGCAGGCGTACAAATGGTGGGAGGAGCCGCCGCTCGCGCCGGG
GCGCCAGTGGAGCCACCTGGAGCACAACGGCATGTCGTTCCCGGACGAGT
ACGAGCCGCACGGCGTGCCGCTCATGTACGACGGGGAGGAGATGGAGCTG
TCGCCGGAGGACGAGGAGATTGCCACGTTCTTTGCGGACGTGCCACTGGA
CGGCCCGCAGGTGCGCAGTGTGCGCGGGGGGGGGGGGGGGGGGGGGGGAG
CTGCATGTTGCAGCACCATATGTTCTGCACTCTGTGTTGGCTGGCGCCGG
AAACTCAGCTCGGGCCGCGCTGTAGTGCCCTGATCCCGTTGCACTTCAAG
GTATGAGCGTGAATAGATGTGGAACAGATTGCAGTTGCGATGGTCAAGCG
CCATTGCTCGGCGTGCTGAAGTGACGTGCCGCTGGTGCGCTGCCACTTGA
GTCCTTTGTCGGGTTCTGTTGTGGGCAAAAGTGCGTGCGCGCACCATTTC
AGGCGGTGCGTGCAAAGGCGCGCTGTGGTACATTGTGAACTGCAGCTGTC
GTGGCGCCGCAGTGCACTGCAGCACGCGCGCTGATGCTGTAGAGCGCTGC
CGCGCTGTGCGGCGCGCCTGCCTGCGCCGATGCTGCCATTGCATGCCGCG
CACCACTCTGTCACCGCTCAAGGCTGTCAAGCTGGCAGTCTGAGCATTGC
TTACATGCTGCCATCCATCTGCTGCGGGCCCCGGGTGATGGGCATGTATG
TAGCTAGAGCGGCACAGAATCCGCCTGCGGCTGTGCTTTGCGATCCCCGC
GCTATGTCAACAGCGTCGAAGTGCTGTCAAGGCCTTTGAGGTTAACCGCT
TGCCTGCGTAGCTGCGGTCGAGTGCCAGTCAAACATCAACTTTGAAGTAT
ACACATTGACCCACGATGCGGCACGGCTTCAGACCCGGCTCGCAGTTCTG
TCCAGCAGCAGCGCTCGCACTCCGCTGGTCACTGCTGCGCTCCTCCGCTC
GCAGCATGGCGACCACTGGTTTAAGTGCCATGAAACCGCAAGTATGAAGT
ACAAAGACTTTGACCTCGATGCAGCTTGCGACAAGGCTCAACGGCTTCGT
CGAGCAGCAACGCTCACCCTCCTCTGCTGATCGCTGCTGCGCTCGTTTGC
AGCGCTGGCGCACAGCTCGGCGACGCCACCACCACTGGTTCAATCAGACT
GCAATTTTGAAGTACGTAGGCCTTGACCCCGGCGCACAAGCTCCGTCAAG
CAGCAGCGCTCACCCTCCTCTGTGATCGCTGCTGCGCTGGTTCGCTGCGC
GCGCTCGCAGCTCGGCGACGCCGCGGCCACTGGCTCAACGTGCCAATCAA
ACCGTGATGTTGAAGTACATCGGCCTTGACCCCGGCGCGACAGCTCCGTC
AAGCAGCAGCGCTCACCCTCCTCCGCTCATCGCTGCTGCGCTCATTCGCT
ACGGCTCGCGCCGCTCGGCGACGCCACGACTACATGTCCAAATTTCTATG
AAACCACAATGTTGACATACTTCATGGGCTTCGACCCTGATGCAAGGCTC
GACAGCCCCGTCAAGTAGCAGTGCTCACCCCCCGCTGCTTTGCTTATTCA
CCATGGCTCGCGCAGCTCGGCGACGCCGCCACCGCCAAGGTCTTCAGCGC
CAACTTCTTCAGCGACTGGAAGGAGTCCATGCCGACGGGGCACCCCCTCA
AGAACGCCAAGTTCGACAAGTGCGACTTCGGCGCGATGCGCGCGCACCTG
CAGCAGCGCCGCCTCATCAAGAAGGCGGCCACGGACGGGGAGCGCGCCGC
TGCCAAGGCGGAGAAGGTGCGCGCGCGCGCGTCCGCCGTCGTGGCAGTGC
TCAGCTGGTGTGGCTGATGCGCGCGCAAGGGGTGGGAGGGGGGGGAAGGG
GGGGGGGGATTGATGAAGGGTGACGGGTGGTTTATCGGGGGCAGGGGAGG
GGGGGGGGGGGGGCAGGGCATCAGAAAAGGGTTATGAGCGGTTGACGGGT
GAGGCTCAGGAGTGAGGGGCGGCGGGCGCGCTGCAGACGCAGGTCGTGTA
AGGACGCGCATACTGAAGCAGCGGTCACCGCATTTTGTCAACAGTGGGGG
ATTGTGATGGTTCTGCAGGGTAGGGCGTGGAAATGCGGAGTCGCTTCATC
GGGGGGCTGCGAAAGCGTAGCGCTGGGGCGCCATGTGCCTTGCTGCGCTC
CGCGGAGAGACCAATGTTGCCAGCGCGCTCGGGCACGCACCAGCTCATAC
GCATTGTCACAGGTTTCTCCCGGCATGCATGAGGCCTTCGCTGCCTCTAT
CGGCAGAGGTAACGGTGCACCGGTGCGGCTGGTGCTGCTGCTGCGTTGTG
AGGTCCATGCTCGCGTTTGCATCCACCGCTTGAGCTGACCCTAATCCCTT
AGGCCATCATTGAGTCAGGGTCAGCTAGCCCTAGCTTCAACCATGCTTCA
GCGCTCCATCACATGCGAGTTGTCCTGCAGCGCCTACACCGAGGGGTGTG
GCGGCACTAATTCCCGCCACCCCGCCGCGTGCCGACGGTCACCATGTGAC
CCCCTCTGTCACCACCTACGAAACGTTTGCCGTCACGAGCCACGTTATGT
GTGATTCGCCGCGCTTCATCACACATCAACTGTTACGTGATCACTTTGCC
CCGTATCGCTGCTTTTCGCCGCGCCGCTGCTCACGAAATGTGTTCCGGCG
TTTATGGAAACCTCAAAGATGAAGTTAAAACATCAACTGGTGACTCTCCC
ACTTGCTTGCTGCAGGAGCGTCGCTTCCACCTGTTTGGCCTCGCCATCGT
GGACGGCCACCTGGAGAAGGTGGGCAACTTCATCATGGAGCCGCCGGGGC
TGTTCCGCGGCCGCGGCAAGCACCCCAAGACGGGCAAGCTGAAGAAGCGC
GCGTACCCGTCGGAGGTCACCGTCAACATCGGCGAAGAGGCCAAGGTGAG
GTGCTGCTACTTCATATTTGAAGTTTGAATTTGAAGTATGATTGCAAGGT
GAAGAAGCACGCGTACCCGTCGGAGGTCACCGTCAACATTGATGAAGAGG
CCAAGGTGATGTGCTGCTACTTCATATTTGAAGTTTAAAGTTGAAAGTAT
GATTGCAAGTTGAAGAAGCGCGCGTTATCCGTCGGAGGTCACCGTCAACA
TCGGCGAAGAGGCCAAGGTGAGGTGACACTACAAATTTGAACAAGTATGG
TATTGCGCTCGGGGTGTGTGTGCGACACTGGTGCCGATGCTTGAGAGCCG
TGCTTGCGTGATGGAGTGTGGATTGGCAAGGAGGCTGGGGCGAAGTTCGG
TGATGACGTTCGGGAGCGTGTGCAACAGTTGTGGTGTCGCTTGCGAAGCG
CACGCACCTGTTGCAGGTCGCCACAAACAATCGCCGAAGCGGCCGAGGCG
AGGCCACCGAGACCATGACGTTCGGAAATGGTGTGGCGGCGGTGATCATG
CTCGGTAAAGTCTCGAAGCCGTTTTTTCACGTATTGCAAGTTGCGCTATT
GTGACCGATGCTGAGCGCTTCAGTACAGTGTTCAAGTTCATGCAGGTACT
GCAAGTTGCGTCACTGTGACCAATGCTAAATGCGTCTCCGCGCACTCCCT
ACCTGTGCAGGTGCCGCAGTGCCATATGCCCGGCTTTGCGTGGGGCAACG
TGCAGCGCGATCCCTATCCCTAACCCTAACAATGTACAGCACAAGCCCCA
ACCCTAACTCTAACCTTACCCCTTCTTGCGCAGGTGCCACAGTGCCCCGT
GCCCGGCTTTGCGTGGGGCAACGTGCAGCACGACCCGGGCGTCGCGTGGC
TGTCGACGTGGAAGGAGAACATCAACAACATGAACAAGTACGCCATGCTC
AGCGCGAGCTCCTCATTCAAGGGCAAGAGCGACATGGAGAAGTACAACAA
GGTGGGCGCGTGCGCCAGAATTCATTTGCAGCCGGCGTGCGTGCACGAAT
GGTTTCCAGCTTCGCTGTTGAAAGTGAACTTCTAGATTTTGTGAGTCCCC
GCCGCCTTGTGGCGAGAACGCAGTATCTCCTGCATTGTGGCGTTTTTTCA
GATGCGAACATCTAATTAGCATTTGCTGCGCCATAGAACCCCCTCCGCCC
CTTCCTCACATGCAGCCTACTGTCGCGCTTTCTGTCGCGCATCTTTGCTG
CTGCGCGCCCCTCTTCGGCCGCTCCTGTGCAACTGCACATCCCGCTTCAC
GAAGAGCCTTAATAGCACATGTTGAAGCGCGCCCCATTGCCCGCCCACGC
GCGCTTGCAGGCCATGCGCCTCAAGGGCCACATCGACGCCATCCGTCGCA
ACGTGCCCCCCTTTGCCGCTCTTATGGAAACACACATCACGCTTTACAAA
GCGGCCTTAATTACACCTGTTGACGTCCGCTATGTGCCCCCCCTTCGCCG
CTTCCGAGCAAATGCACAACATGCTTCACAAACAGCCTTGATAGCACGTG
TTGAAGTGCGCCCCGTGCCCGCCCATGCGCGCGCGCGCAGGCCATGCGCC
TCAAGGGCCACATCGACGCCATCCGGCGCAACGTGCCCCCCTTTGCCGCT
CCCATGGAAACACACATCACGCTTCACAAAGCAGCCTTAATTACACCTGT
TGACGTCCGCTATGTGCCCCCCTTCGCCGCTCCCGAGCAAATGCACAACA
TGCTTCACAAACAGCCTTGATAGCACGTGTTGAAGTGCGCCCCGTGCCCG
CCCATGCGCGCGCGCGCAGGCCATGCGCCTCAAGGGCCACATCGATGCCA
TCCGGCGCAACTACGAGCGCGGCCTCAACGCCAGCACCAGCGAGATGCGC
CAGCTGGCGACGGCCATGTGGCTCATCGACAAGCTCGCGCTGCGTGTCGG
CGGCGAGAAGGTGAGTGTTGCCATCGCGCAGCAGCAACGCTCCGCAAACA
TCAAGTTGTACGCAGCATATAGCATGTAGAAGCAGCATACTTTGAAGTAC
ATGTAATGTATGACCATGTACCTCATCGACGAGCTCGCGCTGCGCGTCGG
CGGCGAGAAGGTGAGGGCTGTGCCCTGCCCAGCAGCATTGCTCCGTGAAT
TTCGAGGCGTAAGCTGGAAGCTGTCCGTGTATACCATGACGCTCTGCGAT
GTTGGCTTTGCTCTTTCATTCATCTACTTGTTGAGCGCATGACTCTTCAC
TCATTCACTCGCTGACTGGCTGCGCGCCAGGGCGAGGACGAAGCGGACAC
GGTTGGCTGCGGAACGCTGCGCGTCGAGCACACGACTCTTTACTCATATA
CTCACTCACTCGCTGACTCGCTGCGCGCCAGGGCGAGGACGAAGCGGACA
CGGTCGGTTGCTGCACGCTGCGCGTCGAGCACATGACGTTCGGCCCTGCC
GGCACGCGCGAGATGGAGCTCGAGTTCCTGGGCAAGGACTCCATGCTCTT
CAAGCAGAACATTGACTTCACGGCGTATGGCGACATTGGCAGCAAGGTCT
TCGACAACCTCACGGCGTTCTGCAAGGGGCGCAAGCCCGCCGAGCAGGTG
AGGCAGCGCTCCGCAGGCGCGCAGCGGCGCTGCTCAGCGCGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGCTGCTGCTGCCGCT
GCCGCTGCTGAGGCAACGCTCCGCAGGCGTGCACACTCGGCGCGCTGTGC
GCACGTGGAGTTGGTCAGTGCCACTTGCTGTGCGGGCGACCTGCAGAGCA
CTAGAGGCAACAGATGTGTTCGAGAATTCGTCGTTGCTGCAGCGTTTGTG
TCCTCATGCACTGTAGTGCTGAATCAGATGTCGCCATATGCGTTCAACGC
CATGAGTCAATGATCCTGGCCCATTGCCCGGCAGGTGTGGTGCGACGTGT
GCGCCACCGTCATCAGCACATGTCATGCAGGAACTGTATGCGGTCTGCAT
CGCTCAGCCAGTGCCGGTTGTGTCCCGCTCTGCACTCATGCTCAGTCCCG
CCTGTGAGAGACTCTGCACAGCTCCACCGGCGCCGTGTGTGCTGCTTTGG
CGCATACGCACAGTCTCGCCCCTCTCACAGCATCAGCGCGCGCGTTGCCT
TCCATGTGTCTTGCAGGTCTTCCAGAAGATCGACCCCACAACGCTCAACA
AGCACCTGCAGAGCCTCATGCCCGGCCTCAGCGCCAAGGTCTTCCGCACG
TACAACGCGAGCGAGACGCTGCAGCAGCAGCTGCCGAGCGCAGACGCGCT
GAAGAACATGACTGTGCAGGCCAAGGTGCGTCATCCCCCCCCCGCCCCCT
CCCCCCCGCGGTCCTGTTCTGCTGTGACCCCTTTTCCCACGCGCGCGTGT
TCTGTTCGTGTTTACATGTCAATGAGAGTGTAGCACCCCCTGCGCCCCTC
CTCCCGCGTGCGTGTTCTGTGTGTGTCTGCGTGACAAATTCAGTGTGGGC
CCGCTAGCTTGGCAGCTAGCGTCTTGGCTTGCAGATGAGGCCTGCGACAA
TCCATTGCTGGGTCTGACAATGTTGCGAAACGTGGCGTTCTTCTCTGACA
GCGCCGCGCAGAGAGCGGTTTGAACCAGTGCATCGGGCCGCGCTCATAAG
TTGCCCCACATGCAACCCCAGCGCTCATATCCCCCCCCCTTCCCCAAACC
CCCCTCCCCCCCCAACCCCCAGGTTGCTGAGTATAACAACGCAAACGTGG
TGCCCTAAATGCAGCCCCAGCGCTGACCCCTCCCCCTTCTCCCCCCCCCC
CCAGGTTGTCGAGTACAACAACGCGAACCGCGAGGTGGCCATCCTCTGCA
ACCACCAGCGCACGGTGAGCGGCGCCATGCTGAAGTCGTTTGAGAACCTG
GGCGAGCGCGTGGCTAAGGTCAAGGAGCAGCGCGCGGACCTCAAGGCGTG
GTTGAAGTTGGCGAAAGACGGCAAGGCCAAGAAGATACCGCTCAAGGGGA
GGGGCTCGTCGCAGGACGCCGACGACGACGAGGAGAAGGTGAGGTTTTTG
TGCACACGTGTTGAAGTAGCGGGAATAGGATTGAAGTTTTGGCTGAGGCA
CAGGCCACGGCGTGTCTCAGGCTGGGCAAGTAGGGCAAGGTCTGGATGAC
ACTAACAGCTTAGGGCGCGTTTCGTTGCAGGACGTGGAGGATGGCTGAAA
GTTGAGTGCCATGGCATGCTTTAGCTCATTGTTTCTGCTGTATGCTCTCG
GTAGGTGCGTGCTCTTAGTTTACAGCGCCAGCCTGACTGGTCCGGTGCAT
TGAGCGCAGCAGAAGCTGGCTGCCTGCCTGGTCGGAAGTGAAGTGAACTG
CCGAGACGCGTGATTGCTTTTTATTGAAGTGCAAAGTGTTACTGTGCCAC
GGCACCCGCCAGTTCCCTCCTGTTCACTTGCATACACCCGCGTATTGCAT
GGACACGCGTTGCTCCCGTCCGCTCAACGGTGTGTTCCGCAAGTGCCTTC
GCCCACCAAGTCTGATTAGCATGGGCGCATCGTGCTTCGTGCTCCTCTTC
AACGCATGCAGGTAAAAGCGGCGATTCAGAAGGCAAAGGACGCAAAGGCC
AACGCCACAACCAGCGAAGAGAAGGTGAGCGCCGCCACTGTGAACAATGA
CCGATTGGTAAACTTGTAAGTGGCAGTTGTGATGTGGGAGAGACGCGGGG
CTCAGTGGTTTAGAGCCGCGCTTGATGCACGTGAAGCCAATGCCTTTTTA
TCAAGATAGGGTCAGAGTTGCAAGAGTCTGAGTCAGCATGGGTTCGTGTG
GCACCAAGGGGCTGGCGCTGCAGCTTTGCTGCAACTGCTGTCGATGGGAA
TGCTGCAGCGGCTTGTGTGACAGCGTGCCCCGCAGCCTGTGGATATTTGT
GATTGATGGCAGGGTGTTCCTGCCCACGAGAAGGACCGCACAAAAGCTAC
AAGCACTGATAATCAGGTTGTGAGGTGAGTTAGTTGGCATATTGGAAATG
ACGAATGCGAAGGGTGGAGTTTACGCTTGTTGGCGCAATCAAGTTTACCC
ATGTCCGCCAGTGGGCATCACTAGCTAGTACGTATATACAGTACGCAACT
GTTATCACATCGCGAAGTGCACCACCAGCAACTGGAGAGCACAAGCGCCC
CTTGTCCATCACTATACTATTTTTGCATGTGCGCAATAAGTGCCCCATAT
TGTGCATATGCTGCGAGGGACAGCACTGAGCGGCTGCGAGCCCCTCCTTT
GAAAAACACTCAACAGCACACGCAAACTTTGAATAATGTTGCAGTCATGT
GTCATCATCAAGGGAGCTTCATGATAAAGAGCATCCGAAAAACAAGATTC
AGATGTGTCTGCAGCCGCATTGCGCTGATGCGCCACTGCGTCGTGCGCAC
GCTCGCAGGTGGCGGCCACCAAGCTGGCGGAGGCGGCCGCGACGGCCAAG
AAGGAGCTCACGCAGCGCAAGTTTGAGGGCTCACACATGTTTGCCAACAC
GCCGTCCGAGGAGCAGCTGCAGCGCAAGATAGAGGGCTGGACGACCAAGC
TCAAGAAGATGGAGGTGGATCTGCGCGACAAGGAGCAGAACAAGGAGGTG
GGTGCGTGGGGCGCCGGCAGCGGTGGCGGCGGCGGCGCTGCTGCTGCTGC
TGCTGCTGCTGCTGGTGGTGTCGCGCGGCGGCGGCGGCGCTGCTGCTGCG
GCGGCTGTCGCGCTCGTGCCTTGTCGAAGCGTGTGCATGTAATAGTGCAA
GGCGGGCGGCGGTGGCGGCGGGTGCCGTGCTGACTTGAGAGAGTGTCCCA
ACTAGGGCTACGGTTAGGGTTGGGATGGGGCTAGGTGAGAAGGTGGCAAC
GGCCGCGTGCGCAGTCAGCAGCGGAGCGCGAGGCGTCAGGTCTCACTCAG
CACGAGCAACATCAGCCCGACTCTAACCCTAAAATCTAGTTCTGATCAAA
CTGACCCTACTCTTTACTCCAACCCCCCCTCGCGCACAGGTCTCCCTCGG
CACAAGCAAGATCAACTACATGGACCCGCGCATCTCGGTCGCGTGGTGCA
AGCGCAACGAGGTCCCCATCGAGCGCATCTTTGCCAAGACGCTGCGCGAC
AAGTTTGTCTGGGCCATGAACGTGCCGCCGGACTGGCGCTTTGACTTTGA
GACGCTGCGCGCGGTGACCGCGGAGTCGAGCGACGAGCCCAAGGCGGTTA
CGGCAGTCGCGGACGACGCTGACGCCAAGGCCAAGGGCAAGGGCGATGAC
GATGAGGAAGAAGAAGAGGAGGAGGAGGAGGAGATGGATTAG

Coding sequence (CDS) from alignment at Contig_68:301585..310926-

>mRNA_8482 ID=mRNA_8482|Name=jgi.p|Trimin1|169920|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2109bp|location=Sequence derived from alignment at Contig_68:301585..310926- (Tribonema minus UTEX_B_3156 )
ATGCCGGCGCCCTCCGCTTGTCCAAGCGCGTGCGGCACGCCCGCACCGCA
AACTATCTACCTACTCTCGCAAGGGCACACGGCTCAGCCCCCCCCCGTCC
CCCTCCCCCCGCGCGCGCCACTGCTGCCGCTGCCGCTGCTGCCGCTGCCG
CTGGTGCTGCAGGCGTACAAATGGTGGGAGGAGCCGCCGCTCGCGCCGGG
GCGCCAGTGGAGCCACCTGGAGCACAACGGCATGTCGTTCCCGGACGAGT
ACGAGCCGCACGGCGTGCCGCTCATGTACGACGGGGAGGAGATGGAGCTG
TCGCCGGAGGACGAGGAGATTGCCACGTTCTTTGCGGACGTGCCACTGGA
CGGCCCGCAGCTCGGCGACGCCGCCACCGCCAAGGTCTTCAGCGCCAACT
TCTTCAGCGACTGGAAGGAGTCCATGCCGACGGGGCACCCCCTCAAGAAC
GCCAAGTTCGACAAGTGCGACTTCGGCGCGATGCGCGCGCACCTGCAGCA
GCGCCGCCTCATCAAGAAGGCGGCCACGGACGGGGAGCGCGCCGCTGCCA
AGGCGGAGAAGGAGCGTCGCTTCCACCTGTTTGGCCTCGCCATCGTGGAC
GGCCACCTGGAGAAGGTGGGCAACTTCATCATGGAGCCGCCGGGGCTGTT
CCGCGGCCGCGGCAAGCACCCCAAGACGGGCAAGCTGAAGAAGCGCGCGT
ACCCGTCGGAGGTCACCGTCAACATCGGCGAAGAGGCCAAGGTGCCACAG
TGCCCCGTGCCCGGCTTTGCGTGGGGCAACGTGCAGCACGACCCGGGCGT
CGCGTGGCTGTCGACGTGGAAGGAGAACATCAACAACATGAACAAGTACG
CCATGCTCAGCGCGAGCTCCTCATTCAAGGGCAAGAGCGACATGGAGAAG
TACAACAAGGCCATGCGCCTCAAGGGCCACATCGATGCCATCCGGCGCAA
CTACGAGCGCGGCCTCAACGCCAGCACCAGCGAGATGCGCCAGCTGGCGA
CGGCCATGTGGCTCATCGACAAGCTCGCGCTGCGTGTCGGCGGCGAGAAG
GGCGAGGACGAAGCGGACACGGTCGGTTGCTGCACGCTGCGCGTCGAGCA
CATGACGTTCGGCCCTGCCGGCACGCGCGAGATGGAGCTCGAGTTCCTGG
GCAAGGACTCCATGCTCTTCAAGCAGAACATTGACTTCACGGCGTATGGC
GACATTGGCAGCAAGGTCTTCGACAACCTCACGGCGTTCTGCAAGGGGCG
CAAGCCCGCCGAGCAGGTCTTCCAGAAGATCGACCCCACAACGCTCAACA
AGCACCTGCAGAGCCTCATGCCCGGCCTCAGCGCCAAGGTCTTCCGCACG
TACAACGCGAGCGAGACGCTGCAGCAGCAGCTGCCGAGCGCAGACGCGCT
GAAGAACATGACTGTGCAGGCCAAGGTTGTCGAGTACAACAACGCGAACC
GCGAGGTGGCCATCCTCTGCAACCACCAGCGCACGGTGAGCGGCGCCATG
CTGAAGTCGTTTGAGAACCTGGGCGAGCGCGTGGCTAAGGTCAAGGAGCA
GCGCGCGGACCTCAAGGCGTGGTTGAAGTTGGCGAAAGACGGCAAGGCCA
AGAAGATACCGCTCAAGGGGAGGGGCTCGTCGCAGGACGCCGACGACGAC
GAGGAGAAGAAGGAGCTCACGCAGCGCAAGTTTGAGGGCTCACACATGTT
TGCCAACACGCCGTCCGAGGAGCAGCTGCAGCGCAAGATAGAGGGCTGGA
CGACCAAGCTCAAGAAGATGGAGGTGGATCTGCGCGACAAGGAGCAGAAC
AAGGAGGTCTCCCTCGGCACAAGCAAGATCAACTACATGGACCCGCGCAT
CTCGGTCGCGTGGTGCAAGCGCAACGAGGTCCCCATCGAGCGCATCTTTG
CCAAGACGCTGCGCGACAAGTTTGTCTGGGCCATGAACGTGCCGCCGGAC
TGGCGCTTTGACTTTGAGACGCTGCGCGCGGTGACCGCGGAGTCGAGCGA
CGAGCCCAAGGCGGTTACGGCAGTCGCGGACGACGCTGACGCCAAGGCCA
AGGGCAAGGGCGATGACGATGAGGAAGAAGAAGAGGAGGAGGAGGAGGAG
ATGGATTAG