Trimin1|350605|estExt_Genemark1.C_Ctg_670054 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350605
Unique NameTrimin1|350605|estExt_Genemark1.C_Ctg_670054
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length136
Homology
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BLAST of jgi.p|Trimin1|350605 vs. uniprot
Match: A0A836C9N1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9N1_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.680e-93
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 
Query:    1 MKHLMNLALGTALNRGSRLWLLSGLVHVFAAVRALLGMPALDTEQLIGMVGGGGASAFFRLGGVYGGGALKSKAWIYINKYGQEEGMARFCQFYKEVKHAATIDLPADKKSMGKGKGRACNLNDPLPFPSHCQRS 135
            MKHLMNLALGTALNRGSRLWLLSGLVHVFAAVRALLGMPALDTEQLIGMVGGGGASAFFRLGGVYGGGALKSKAWIYINKYGQEEGMARFCQFYKEVKHAATIDLPADKKSMGKGKGRACNLNDPLPFPSHCQRS
Sbjct:    1 MKHLMNLALGTALNRGSRLWLLSGLVHVFAAVRALLGMPALDTEQLIGMVGGGGASAFFRLGGVYGGGALKSKAWIYINKYGQEEGMARFCQFYKEVKHAATIDLPADKKSMGKGKGRACNLNDPLPFPSHCQRS 135
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BLAST of jgi.p|Trimin1|350605 vs. uniprot
Match: A0A835ZCY5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY5_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 4.160e-10
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0 
Query:  101 ATIDLPADKKSMGKGKGRACNLNDPLP 127
            ATIDLPADKKSMGKGKGRACNLNDPLP
Sbjct:    7 ATIDLPADKKSMGKGKGRACNLNDPLP 33
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BLAST of jgi.p|Trimin1|350605 vs. uniprot
Match: A0A835Z5U2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.220e-8
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0 
Query:  101 ATIDLPADKKSMGKGKGRACNLNDPLP 127
            ATIDLPADKKSMGKGKGRACNLNDPLP
Sbjct:  855 ATIDLPADKKSMGKGKGRACNLNDPLP 881
[Close]
BLAST of jgi.p|Trimin1|350605 vs. uniprot
Match: A0A836CG11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG11_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 5.100e-5
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 0 
Query:   96 EVKHAATIDLPADKKSMGKGKGRACNLNDPLP 127
            E++   TID PA+KKSMGKGKGRA NLNDPLP
Sbjct:  893 EMRLFLTIDSPANKKSMGKGKGRAGNLNDPLP 924
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350605 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836C9N1_9STRA1.680e-93100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCY5_9STRA4.160e-10100.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z5U2_9STRA2.220e-8100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CG11_9STRA5.100e-575.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_67contigContig_67:498801..501647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350605mRNA_10390Tribonema minus UTEX_B_3156 mRNAContig_67 498240..501647 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350605|estExt_Genemark1.C_Ctg_670054 ID=Trimin1|350605|estExt_Genemark1.C_Ctg_670054|Name=jgi.p|Trimin1|350605|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=136bp
MKHLMNLALGTALNRGSRLWLLSGLVHVFAAVRALLGMPALDTEQLIGMV
GGGGASAFFRLGGVYGGGALKSKAWIYINKYGQEEGMARFCQFYKEVKHA
ATIDLPADKKSMGKGKGRACNLNDPLPFPSHCQRS*
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