mRNA_9695 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350569
Unique NamemRNA_9695
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|350569 vs. uniprot
Match: A0A836CA36_9STRA (CDC45 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA36_9STRA)

HSP 1 Score: 1238 bits (3202), Expect = 0.000e+0
Identity = 726/726 (100.00%), Postives = 726/726 (100.00%), Query Frame = 1
Query:  313 IAPVAGTVAIMPKTVLILVAPTADAMCACRILCSMLQSDVISYQVQPVSGYADVAAANAALVRGSGELRSVFLLGCGARRNVEKLLPDLLEGAHVYVADAHRPVHLANIYRCVRGGSGCGXXXXXAARLADRKVVVLDDGYLGADEEGQLSDGDDLSGAEDTDSEPDSDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXETSEESDGEAELDGGDPAGGXXXXXXXXXXXXXXXXXXXXHAGDXXXXXXXXXXXXXXXXRGRNTLTPAELHAIEEARRVPAERRRRLREYYASDSYGLGASLVLYNLAERRAKDTNDLLWMAIVGLTDQFVHARIQKDMYLTHMWELHGNVVMKNADEDSAMQLDADTRVPVGERGRIAFEMELRFMLHRHWSLYEAMYYRDKSCGXXXXXXXXXXXXRLYEAMYDRAVCARVARHFNSCSKLRVWTTPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLTDIKYGSFHRYLGFKTPFSAADIVYCATTLIEHRPDDPPGEIAADVSEEVLDARERDAFQRSFNDAYDALGGHNPKSLQRGLDLSMSLQRAVVQQAVSMLEKNTLLRTTHFRYAYIRATEAHCNVIAQPCALARLALLLMDVNRESKHWTGANRRPLILLAERRTAYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARVRLDGFDRNVVEVPRAHAGRFVEVVYETMDA 2490
            IAPVAGTVAIMPKTVLILVAPTADAMCACRILCSMLQSDVISYQVQPVSGYADVAAANAALVRGSGELRSVFLLGCGARRNVEKLLPDLLEGAHVYVADAHRPVHLANIYRCVRGGSGCGXXXXXAARLADRKVVVLDDGYLGADEEGQLSDGDDLSGAEDTDSEPDSDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXETSEESDGEAELDGGDPAGGXXXXXXXXXXXXXXXXXXXXHAGDXXXXXXXXXXXXXXXXRGRNTLTPAELHAIEEARRVPAERRRRLREYYASDSYGLGASLVLYNLAERRAKDTNDLLWMAIVGLTDQFVHARIQKDMYLTHMWELHGNVVMKNADEDSAMQLDADTRVPVGERGRIAFEMELRFMLHRHWSLYEAMYYRDKSCGXXXXXXXXXXXXRLYEAMYDRAVCARVARHFNSCSKLRVWTTPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLTDIKYGSFHRYLGFKTPFSAADIVYCATTLIEHRPDDPPGEIAADVSEEVLDARERDAFQRSFNDAYDALGGHNPKSLQRGLDLSMSLQRAVVQQAVSMLEKNTLLRTTHFRYAYIRATEAHCNVIAQPCALARLALLLMDVNRESKHWTGANRRPLILLAERRTAYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARVRLDGFDRNVVEVPRAHAGRFVEVVYETMDA
Sbjct:  105 IAPVAGTVAIMPKTVLILVAPTADAMCACRILCSMLQSDVISYQVQPVSGYADVAAANAALVRGSGELRSVFLLGCGARRNVEKLLPDLLEGAHVYVADAHRPVHLANIYRCVRGGSGCGXXXXXAARLADRKVVVLDDGYLGADEEGQLSDGDDLSGAEDTDSEPDSDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXETSEESDGEAELDGGDPAGGXXXXXXXXXXXXXXXXXXXXHAGDXXXXXXXXXXXXXXXXRGRNTLTPAELHAIEEARRVPAERRRRLREYYASDSYGLGASLVLYNLAERRAKDTNDLLWMAIVGLTDQFVHARIQKDMYLTHMWELHGNVVMKNADEDSAMQLDADTRVPVGERGRIAFEMELRFMLHRHWSLYEAMYYRDKSCGXXXXXXXXXXXXRLYEAMYDRAVCARVARHFNSCSKLRVWTTPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLTDIKYGSFHRYLGFKTPFSAADIVYCATTLIEHRPDDPPGEIAADVSEEVLDARERDAFQRSFNDAYDALGGHNPKSLQRGLDLSMSLQRAVVQQAVSMLEKNTLLRTTHFRYAYIRATEAHCNVIAQPCALARLALLLMDVNRESKHWTGANRRPLILLAERRTAYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARVRLDGFDRNVVEVPRAHAGRFVEVVYETMDA 830          
BLAST of jgi.p|Trimin1|350569 vs. uniprot
Match: D7FQX6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQX6_ECTSI)

HSP 1 Score: 449 bits (1154), Expect = 3.410e-144
Identity = 319/720 (44.31%), Postives = 425/720 (59.03%), Query Frame = 1
Query:  352 TVLILVAPTADAMCACRILCSMLQSDVISYQVQPVSGYADVAAANAALVRGSGELRSVFLLGCGARRNVEKLLPDLLEGAHVYVADAHRPVHLANIYRCVRGGSGCGXXXXXAARLADRKVVVLDDGYLGADEEGQLSDGDDLSGAEDTDSEPDSDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXETSEESDGEAELDGGDPAGGXXXXXXXXXXXXXXXXXXXXHAGDXXXXXXXXXXXXXXXXRGRNTLTPAELHAIEEARRVPAERRRRLREYYASDSYGLGASLVLYNLAERRAKDTNDLLWMAIVGLTDQFVHARIQKDMYLTHMWELHGNVVMKNADED-SAMQLDADTRVPVGERGRIAFEMELRFMLHRHWSLYEAMYYRDKSCGXXXXXXXXXXXXRLYEAMYDRAVCARVARHFNSCSKLRVWTTPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLTDIKYGSFHRYLGFKTPFSAADIVYCATTLIEHRP------DDPPGEIAADVSEEVLDARERDAFQRSFNDAYDALGGHNPKSLQRGLDLSMSLQRAVVQQAVSMLEKNTLLRTTHFRYAYIRATEAHCNVIAQPCALARLALLLMDVNRESKHWTGANRRPLILLAERRTAYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARVRLDGFDRNVVEVPRAHAGRFVEVVYETMDA 2490
            TVL+ VAP  DAMCACRIL  ML++D +SY+++PV+GY D++AAN  L++G+ ++RSV ++ CGA  NV  LL  L   A+VY+ D++RPVHLAN+Y                    DR VV +D+     D +   SDG+ L G ++T     SD+SD XXXXXX     XXXXXXXXXXXXXX   E+ +  +                          XXXX    XXXXXXXXXXXXXXX R R     AE+            RR+R+R+YY   ++G  +++ L+ +A +  KDTNDLLW+AIVGLTDQ++H RI +++Y   + +L  +VV KN+         D  T VPV E GRI  +ME RFMLHRHWSLYE+MY+ +                                      SKL VW + GR R+EE LAKMGFSLEQC+QK+ F S  LR +L DQI+KY E+YGL D+ YGS+ RY GFK P SAAD+VYC T L EH+       +  PG+      +E       + +  SFN AYDAL G +P  L++GL LSMSLQRAVVQQAV+M+EK +L    HFRYA+IR++E    +  QP AL +LA  L+DV+RE+  W G   RPL+++AER + YLVVGV CP      +  RFGA F+LAA ++ AR R DGF+ +V+E+ +     F++ +++TM A
Sbjct:   27 TVLVFVAPNCDAMCACRILSYMLRADAVSYKIKPVAGYGDISAANEELIKGNEDIRSVVMINCGAICNVVDLLSQLSPEAYVYIVDSNRPVHLANVYP-----------------KKDRVVVFVDE--ENGDVDNIPSDGEGLDGNDET-----SDESDAXXXXXXELASNXXXXXXXXXXXXXXARPEDKENTSXX------------------------XXXXXXXXXXXXXXXXXXXXXXXARARRQAHDAEV-----------TRRQRIRQYYNGATHGSASAVQLFAMAMQLNKDTNDLLWLAIVGLTDQYIHQRIDQEIYHMVVAQLQQHVVAKNSKTSLETSSADGKTLVPVSEMGRITCDMEFRFMLHRHWSLYESMYFSNFVA-----------------------------------SKLNVWNSNGRHRLEEFLAKMGFSLEQCKQKYPFMSCQLRKRLRDQIEKYAEDYGLQDVFYGSYQRYCGFKNPLSAADMVYCITALAEHKDLVGVTTEQGPGDSTGVEEDE-------EGWIDSFNTAYDALSGKSPMLLKQGLSLSMSLQRAVVQQAVTMMEKRSLTLFKHFRYAFIRSSETDERLFTQPMALRKLAAFLIDVHRENGRWAGDKARPLVIMAERVSTYLVVGVTCPKIAGTVIKNRFGACFQLAAQQIQARARHDGFEASVMEISKEDVHDFIQALHDTMSA 645          
BLAST of jgi.p|Trimin1|350569 vs. uniprot
Match: W7TEF5_9STRA (Cell division control protein 45 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEF5_9STRA)

HSP 1 Score: 318 bits (815), Expect = 5.310e-93
Identity = 274/787 (34.82%), Postives = 372/787 (47.27%), Query Frame = 1
Query:  352 TVLILVAPTADAMCACRILCSMLQSDVISYQVQPVSGYADVAAANAALVRGSGELRSVFLLGCGARRNVEKLLPDLLEGAHVYVADAHRPVHLANIYRCVRGGSGCGXXXXXAARLADRKVVVLDDGYLGADEEGQLSDGDDLSGAEDTDSEP----DSDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXETSEESD-----------------------------------GEAELDGGDPAGGXXXXXXXXXXXXXXXXXXXXHAGDXXXXXXXXXXXXXXXXRGRNTLTPAE------LHAIEEAR-------RVPAERRRRLREYYASDSYGLGASLVLYNLAERRAKDTNDLLWMAIVGLTDQFVHARIQKDMYLTHMWELHGNVVMKNADEDSAMQLDADTRVPVGERGRIAFEMELRFMLHRHWSLYEAMYYRDKSCGXXXXXXXXXXXXRLYEAMYDRAVCARVARHFNSCSKLRVWTTPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLTDIKYGSFHRYLGFKTPFSAADIVYCATTLIEH----RPDDPPGEIAADVSEEVLDARERDA-------FQRSFNDAYDALGGHNPKSLQRGLDLSMSLQRAVVQQAVSMLEKNTLLRTTHFRYAYIRATEAHCN--VIAQPCALARLALLLMDVNRESKHWTGA---------NRRPLILLAERRTAYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARVRLDGFDRNVVEVPRAHAGRFVEVVYETMDA 2490
            TVL+LVA   D +CACRIL  ML++D ++Y + PVSGY+  +A   AL   + ++RSV L+ CGA  NV  LLP        YV D+HRP+HLANIY   R                   V VL D     D     SDG+ LSG E++D E     + DD            XXXXXXX         E+ +E D                                    E E D G  + G         XXXXXXXXXXX  G                 R R    P +      L A E AR       R   ERRRR+ +YY    +G  ++LVL+ L++   +D+ D LW+AIVGLTD  VH RI+   Y   +  L   V    A   +  +    T VP  E GRI  + + +FML+RHWSLYE+MY+                    Y A                 SKL VW + G+QR+EELLAKMGFSL QCR+ F++  ++L+ +L +++D Y EE+GL ++ Y SFHR   +    SA+D+VY    L+E        D    +    S  V    + D        F   F++AYDAL G +   L  G+ L+M+LQ+A+ + AVS+ +K  +    HFR+A I    A     ++ QP A++RLA L++DV+RE K    A           +PL++ AERR+ YLVVGV CP    + +  RF + F LAA    AR R DGFD  V+E+ +  A RF E ++   DA
Sbjct:   23 TVLVLVAADVDGLCACRILTHMLRTDNVAYSLVPVSGYSHASALLRALSESNNDIRSVVLINCGAIVNVTNLLPWDRLNLTCYVIDSHRPIHLANIYERER-------------------VFVLHDEEEDMDLTCIPSDGEGLSGGENSDEEGSMDGEGDDKPTIGDATSEDEXXXXXXXEEVGEFSELESEDELDLEDAKGREVEIWKHKRHNKKRGEGIAKRGRRAEESSEDESDVGGESHGLHGSEEEESXXXXXXXXXXXXEGGILIDESDGTSQSGSE-RSRQAHKPGKRTGESSLGAREPARLKRRQENRARRERRRRIEQYYMGAFHGAPSALVLHRLSQEVNRDSRDTLWLAIVGLTDLLVHQRIEHVHYRQMVEGLEIEVQASQAQMQTGFEASDGTLVPTSEAGRIVADFDYQFMLYRHWSLYESMYHSP------------------YVA-----------------SKLLVWWSHGKQRLEELLAKMGFSLAQCRENFKYMDSDLKAQLREELDNYHEEFGLDEVFYLSFHRRTHYGAAVSASDVVYGVAALLEAWQGPAGSDTDPSLVGGASTNVTGVNQEDEAAATGRLFVARFHEAYDALSGRDEAKLTEGIHLAMALQKAIFRVAVSLHDKKAVRNLDHFRWAVIHNNLASAEDYLLTQPMAISRLAHLMIDVSREEKMRQQAASQSGRTLWKPKPLLIFAERRSTYLVVGVSCPDQRGEVVKHRFASLFRLAADGCKARYRHDGFDSAVLELDKNSATRFTESLFLACDA 754          
BLAST of jgi.p|Trimin1|350569 vs. uniprot
Match: A0A1V9ZJC1_9STRA (Cell division control protein 45 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJC1_9STRA)

HSP 1 Score: 269 bits (687), Expect = 2.370e-75
Identity = 252/748 (33.69%), Postives = 374/748 (50.00%), Query Frame = 1
Query:  352 TVLILVAPTADAMCACRILCSMLQSDVISYQVQPVSGYADVAAANAALVRGSGELRSVFLLGCGARRNVEKLLPDLLEGAHVYVADAHRPVHLANIYRCVRGGSGCGXXXXXAARLADRKVVVLDDGYLGADEEGQLSDGDDLSGAEDTDSEPDSDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXETSEES---------DGEAE---------------LDGGDPAGGXXXXXXXXXXXXXXXXXXXXHAGDXXXXXXXXXXXXXXXXRGRNTL--TPAELHAIEEARRVPAERRRRLREYYASDSYGLGASLVLYNLAERRAKDTNDLLWMAIVGLTDQFVHARIQKDMYLTHMWELHGNVVMKNADEDSAMQLDADTRVPVGERGRIAFEMELRFMLHRHWSLYEAMYYRDKSCGXXXXXXXXXXXXRLYEAMYDRAVCARVARHFNSCSKLRVWTTPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLTDIKYGSFHRYLGFKTPFSAADIVYCATTLIEHRPDDPPGEIAADVSEEVLDARERDA----FQRSFNDAYDALGGHNPKS---LQRGLDLSMSLQRAVVQQAVSMLEKNTLLRTTHFRYAYIRATEAHCNVIAQPCALARLALLLMDVNRESKHWTGANRRPLILLA--ERRTAYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARVRLDGFDRNVVEVPRAHAGRFVEVVYETMDA 2490
            +VL+LVA  AD++ A  IL ++LQ+D+I+Y + PV+G   +A      +  S ++RS+FL+ CGA  ++   L    +   VYV D+HRP+HLAN+Y   R G+                V + DD      EE    DG D+   E+     D DD  XXXXXXXXXXXXX             + +++          DGEAE               +DGG+                         +G XXXXXXXXXXXXXXXX     +   PA   +   ++    +RR  + +YY    YG  A+ +LY LA +  + T D +W AIVGLT QFV  +I    Y   + +    V+  N   D    +D  T +P    G IAFE E RF+L+RHWSLY++MYY +                  Y A                 +KL+ W + G+ ++E  LA+MG SL++C+Q + F S  L++KL +++ +   E+ L +I YGSF R   FK  + AADIV+  + L+E     PP  I   V ++V D    D     +Q SF+ A  AL   + +S   L++G+ L+M++Q+AVV   +S+L++  ++R  HFRY  +R +E    + + P  L++LAL L+DV+RE   WTG +  P +LL   + R  YL+VGV CP    +    + G AF++AAA   A+   DGFD  V+E+       F+E ++  +DA
Sbjct:   26 SVLLLVALDADSIAAVSILTAVLQADMIAYSLVPVAGNQQLAD-----MTFSSDIRSIFLINCGAMIDIFSTLQLQGQNIKVYVVDSHRPIHLANVYD--RHGT----------------VFLFDDEAQA--EEDFPEDGPDIEAIEN-----DEDDEXXXXXXXXXXXXXXSDGEAEVGDNLVQDATKKRKRSGSDDSLDGEAEAILVGAPDAAIADEAMDGGESQPTDNDDTAEVASRETKPDKEANASGXXXXXXXXXXXXXXXXXXXXPDVEKVPAAAPSRGSSKH---QRRVEILQYYRGSYYGAPAATLLYELAAQVNQSTPDKVWFAIVGLTKQFVAQQIDAHNYNMFVQKFQDEVLALNQAVDDVTDVDG-TALPTVHGGTIAFEEEYRFLLYRHWSLYKSMYYSN------------------YVA-----------------AKLKTWQSAGKDKLEVFLARMGLSLKECQQSYTFMSMELKHKLREKLQEIAPEFELDEILYGSFRRQFEFKYQWCAADIVHGISALLEA----PPYLIQKTVEKKVPDILAMDESVPFWQHSFHLAAQALPCKSKRSCTLLEQGIKLAMAMQKAVVSMGISILDRKLIVRIKHFRYVCLRLSEDDEAMFSHPSTLSKLALFLVDVHREQGKWTGKHACPFVLLCHLKARNVYLIVGVTCPERAGEIHRNKLGTAFKMAAAETGAKYTHDGFDTTVMEIQMDDIQGFIEQLHNVLDA 700          
BLAST of jgi.p|Trimin1|350569 vs. uniprot
Match: A0A024U0U2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0U2_9STRA)

HSP 1 Score: 265 bits (676), Expect = 8.830e-74
Identity = 273/750 (36.40%), Postives = 380/750 (50.67%), Query Frame = 1
Query:  352 TVLILVAPTADAMCACRILCSMLQSDVISYQVQPVSGYADVAAANAALVRGSGELRSVFLLGCGARRNVEKLLPDLLEGAHVYVADAHRPVHLANIYRCVRGGSGCGXXXXXAARLADRKVVVLDDGYLGADEEGQLS-----DGDDLSGAEDTDSEPDSDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXETSEESDGEAELD-GGDPAGGXXXXXXXXXXXXXXXXXXXXHAGDXXXXXXXXXXXXXXXXRGRNTLTPAELHAIEEA----RRVPAERRRRLR--EYYASDSYGLGASLVLYNLAERRAKDTNDLLWMAIVGLTDQFVHARIQKDMYLTHMWELHGNVVMKNADEDSA-MQLDAD-TRVPVGERGRIAFEMELRFMLHRHWSLYEAMYYRDKSCGXXXXXXXXXXXXRLYEAMYDRAVCARVARHFNSCSKLRVWTTPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLTDIKYGSFHRYLGFKTPFSAADIVYCATTLIE------------HRPD------DPPGEIAADVSEEVLDARERDAFQRSFNDAYDALGGHNPKS---LQRGLDLSMSLQRAVVQQAVSMLEKNTLLRTTHFRYAYIRATEAHCNVIAQPCALARLALLLMDVNRESKHWTGANRRPLILLA--ERRTAYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARVRLDGFDRNVVEVPRAHAGRFVEVVYETMDA 2490
            +VL+LVA   D++ A  IL S+LQS++++Y + PV+GY  +A  N      S E+RS+FL+ CGA  +V   L   +    VYV D+HRP+HLAN+Y   R G+                VV+ DD       EGQ       DG D++  E    E       XXXXXXXXXXXXXXXXXXXXXXXXXX    ES+G    D GGD   G XXXXXXXXXXXXXXX      G                          E+  +  A    + +P++R+RRL   +YY    +G  A+ ++Y LA +    T + +W AIVGLT QFV  +I  D Y   + +    V+   A+  S  +  D D T +P  + G IAFE E RFML+RHWSLYE+MYY +                  Y A                 +KL+ W   G+  +E  LA+MG SL++C+Q+F F S  L+  L D+      E+GL ++ YGSF R   FK  + AAD+ +  + L++            H PD      D P E + D +     A     +Q SF+ A DAL   + +S   ++RG+ ++M LQ+A+V   +S+L++  L+R  HFRY  +R +E    + + P  L++LAL L+DV+RE   W G +  P +L+A  + R  YLVVGV CP    D      G AF LAAA   A    DGF+  V+E+       F+E ++  MDA
Sbjct:   26 SVLLLVALDVDSIAAVSILTSLLQSEMVAYSMVPVAGYKQMA--NMVF---STEIRSIFLINCGAMIDVYSTLK--ITDQKVYVIDSHRPLHLANVYD--RHGT----------------VVLFDD-------EGQAEGDFPDDGSDIAAIE---QEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTESNGSLTSDDGGDDGEGAXXXXXXXXXXXXXXXPDRDDEGGHAVNMDEPRSEDEGSVDNEAQDGEPEVEQVPPAAFPDKHLPSKRKRRLDILQYYRGSFHGAPAATLVYELASQLNMATQEKVWYAIVGLTKQFVAQQIDADNYNMLVQKFQDEVLALPANGGSNDIVTDVDGTILPTVQNGAIAFEEEYRFMLYRHWSLYESMYYSN------------------YVA-----------------AKLKTWQAAGKDELEVFLARMGLSLKECQQRFTFMSRELKQTLRDKCRDIAPEFGLDELFYGSFRRQFEFKYQWCAADVFHGLSALLDAPLHVAQKALADHVPDALQGIYDEPTETSGDGAPS---APSLPYWQHSFHLAMDALPCSSTRSCVLMERGMHMAMQLQQAIVHLGISILDRKLLVRVKHFRYVCLRLSEEEELLFSHPSTLSKLALFLVDVHREQGKWIGKHAAPFVLVAHVKARNVYLVVGVTCPERAGDIHRNTLGTAFALAAAETGALSTYDGFETTVMELRMDDIHVFIEQLHNVMDA 702          
BLAST of jgi.p|Trimin1|350569 vs. uniprot
Match: A0A1V9ZXW5_9STRA (Cell division control protein 45 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXW5_9STRA)

HSP 1 Score: 268 bits (685), Expect = 3.150e-72
Identity = 249/736 (33.83%), Postives = 361/736 (49.05%), Query Frame = 1
Query:  352 TVLILVAPTADAMCACRILCSMLQSDVISYQVQPVSGYADVAAANAALVRGSGELRSVFLLGCGARRNVEKLLPDLLEGAH--VYVADAHRPVHLANIYRCVRGGSGCGXXXXXAARLADRKVVVLDDGYLGADEEGQLSDGDDLSGAEDTDSEPDSDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXETSEESDGEAELDGGDPAGGXXXXXXXXXXXXXXXXXXXXHAGDXXXXXXXXXXXXXXXXRGRNTLTPA--------ELHAIEEARRVPA---------ERRRRLREYYASDSYGLGASLVLYNLAERRAKDTNDLLWMAIVGLTDQFVHARIQKDMYLTHMWELHGNVVMKNADEDSAMQLDADTRVPVGERGRIAFEMELRFMLHRHWSLYEAMYYRDKSCGXXXXXXXXXXXXRLYEAMYDRAVCARVARHFNSCSKLRVWTTPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLTDIKYGSFHRYLGFKTPFSAADIVYCATTLIEHRPDDPPGEIAADVSEEVLDARERDA----FQRSFNDAYDALGGHNPKS---LQRGLDLSMSLQRAVVQQAVSMLEKNTLLRTTHFRYAYIRATEAHCNVIAQPCALARLALLLMDVNRESKHWTGANRRPLILLAERRT--AYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARVRLDGFDRNVVEVPRAHAGRFVEVVY 2475
            +VL+LVA  AD++ A  IL ++LQ+D+ISY +QPV G   +A    A      ++RSVFL+ CGA  ++   +   L+G +  VYV D+HRP+HLAN+Y   R G+                V + DD     +E  Q  DG D+   E            XXXXXXXXXXXXXXXXXXXXXXXXXXE+ +  +GEAE+   D A                        GD                   N    A              E  +VPA         +RR  + +YY    YG  AS +LY LA +  + T D +W AIVG T QF+  +I    Y   + +    V+  N   +    +D  T +P    G IAFE E RF+L+RHWSLY +MYY +                  Y A                 +KL+ W + G+  +E  LA+MG SL++C+Q + F S  L+NKL +++ +   E+ L +I YGSF R   FK  + AAD+V+  + L+E     PP  I   V +++ D    D     +Q SF+ A  AL   + +S   +++G+ L+M++Q+A+V   +S+L++  ++R  HFRY  +R +E    V A P  L++LAL L+DV+RE   WTG    P +LL   +T   YL+VGV CP    +    + G AF++AAA   A+   DGFD  V+E+       F+E ++
Sbjct:   26 SVLLLVALDADSIAASSILTAILQADMISYSLQPVVGNQQLADTTFA-----ADIRSVFLINCGAMIDIYSTMQ--LQGTNIKVYVIDSHRPIHLANVYD--RHGT----------------VFLFDDEAQAEEEFPQ--DGPDIEAIEQ---------DXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDSMEGEAEITL-DVAVPEPTESNEDLSQTKEDEIINEDGGDIIEGIEESDGVDGVNEGEDNEADDALEKEXXXXXXXXEPELEKVPAAKPQGSLKYQRRLEILQYYRGSYYGAPASTILYELATQINQSTPDKVWFAIVGFTKQFLSQQIDAQNYNMFVQKFQDEVLSLNQAVEDVTDIDG-TALPSVHGGTIAFEEEYRFLLYRHWSLYNSMYYSN------------------YIA-----------------AKLKTWQSAGKDELEVFLARMGLSLKECQQSYTFMSMELKNKLREKLQEIAPEFELDEIMYGSFRRQFEFKYQWCAADVVHGISALLEA----PPYLIRKSVEKKIPDILAMDEGVPFWQHSFHIASRALPCKSKRSCTLMEQGIKLAMTMQKAIVSMGISILDRKLIVRIKHFRYVCLRLSEDDEAVFAHPSTLSKLALFLVDVHREQGKWTGKQACPFVLLCHLKTQNVYLIVGVTCPERAGEIHRNKLGTAFKMAAAETGAKYTHDGFDTTVMEIQMDDIQGFIEQLH 684          
BLAST of jgi.p|Trimin1|350569 vs. uniprot
Match: A0A6G0XJ66_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJ66_9STRA)

HSP 1 Score: 256 bits (654), Expect = 9.170e-71
Identity = 254/746 (34.05%), Postives = 359/746 (48.12%), Query Frame = 1
Query:  352 TVLILVAPTADAMCACRILCSMLQSDVISYQVQPVSGYADVAAANAALVRGSGELRSVFLLGCGARRNVEKLLPDLLEGAHVYVADAHRPVHLANIYRCVRGGSGCGXXXXXAARLADRK-VVVLDDGYLGADEEGQLS-----DGDDLSGAEDTDSEPDSD------------------DSDXXXXXXXXXXXXXXXXXXXXXXXXXXETSEESDGEAELDGGDPAGGXXXXXXXXXXXXXXXXXXXXHAGDXXXXXXXXXXXXXXXXRGRNTLTPAELHAIEEARRVPAERRRRLR--EYYASDSYGLGASLVLYNLAERRAKDTNDLLWMAIVGLTDQFVHARIQKDMYLTHMWELHGNVVMKNADEDSAMQLDADTRVPVGERGRIAFEMELRFMLHRHWSLYEAMYYRDKSCGXXXXXXXXXXXXRLYEAMYDRAVCARVARHFNSCSKLRVWTTPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLTDIKYGSFHRYLGFKTPFSAADIVYCATTLIEHRPDDPPGEIAADVSEEV--LDARERDAFQRSFNDAYDALGGHNPKS---LQRGLDLSMSLQRAVVQQAVSMLEKNTLLRTTHFRYAYIRATEAHCNVIAQPCALARLALLLMDVNRESKHWTGANRRPLILLA--ERRTAYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARVRLDGFDRNVVEVPRAHAGRFVEVVYETMDA 2490
            +VL+LVA   D++ A  IL S+LQ+D+++Y + PVSGY  +A      +  S E+RS+FL+ CGA  +V   L   L    VYV D+HRP+HLAN+Y                    DR  +VVL       D+EGQ       DG D+   E  D                        D D                          ET E+   E              XXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXX         +    E+   + ++R+RRL   +YY    YG  A+ + Y LA +  + + D +W AIVG+T QF+  +I  D Y   + +    V+      +  ++    T +P    G IAFE E RF+L+RHWSLY++MYY +                  Y A                 +KL+ W   G+  +E  LA+MG SL++C Q F F + +L+  L D+  +   E+GL D+ YGSF R+  FK  + AADIVY  + L+E         +A  V + V  LD  E   +  SF+ A +AL   + +S   L+RG+ ++M LQ+A+V   +S+L++  ++R  HFRY  +R TE    + +    L++LAL L+DV+RE   W G N  P +L++  + R  YLVVGV CP    +      G AF LAAA   A    DGF+  V+E+       FVE ++  MDA
Sbjct:   26 SVLLLVALDVDSIAAVSILTSLLQADMVAYSLVPVSGYKQLAE-----MTFSSEIRSIFLINCGAMVDVYSSLK--LTDQKVYVIDSHRPLHLANVY--------------------DRHGIVVL------FDDEGQAEGDFPEDGSDIEAIEQEDEXXXXXXXXXXXXXXXXXXXXXVPDQDLTEPGVGAKRKRTDSDASDGTEDGVDETQEQPVDETAX----------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQNDVAEKTSGMSSKRKRRLEILQYYRGSFYGAPAATLTYELASQLNQSSQDKVWYAIVGITKQFIAQQIDADNYNMLVQKFQDEVLALPGTANEEVKDVDGTVLPSVLDGSIAFEEEYRFVLYRHWSLYQSMYYSN------------------YVA-----------------AKLKCWQAAGKDELEVFLARMGLSLKECHQSFTFMARDLKQDLRDKFRELAPEFGLDDMFYGSFRRHFEFKHQWCAADIVYGLSALLEAPAYVTKKALAPHVPDAVDNLDDDEAPFWPHSFHLAMEALPCKSSRSCLILERGMHIAMELQQAIVHLGISILDRKLIVRVKHFRYVCLRLTEEEELLFSHASTLSKLALFLVDVHREQGKWIGKNAAPFVLISHLKARNVYLVVGVTCPERAGEIHRNTLGTAFSLAAAETGATSSYDGFETTVMELHVDDIHVFVEQLHNVMDA 693          
BLAST of jgi.p|Trimin1|350569 vs. uniprot
Match: A0A8J2SY65_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SY65_9STRA)

HSP 1 Score: 249 bits (635), Expect = 8.040e-69
Identity = 234/728 (32.14%), Postives = 327/728 (44.92%), Query Frame = 1
Query:  349 KTVLILVAPTADAMCACRILCSMLQSDVISYQVQPVSGYADVAAANAALVRGSGELRSVFLLGCGARRNVEKLLPDLLEGAHVYVADAHRPVHLANIYRCVRGGSGCGXXXXXAARLADRKVVVLDDGYLGADEEGQLSDGDDLSGAEDTDSEPDSDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXETSEESDGEAELDGGDPAGGXXXXXXXXXXXXXXXXXXXXHAGDXXXXXXXXXXXXXXXXRGRNTLTPAELHAIEEARRVPAERRRRLREYYASDSYGLGASLVLYNLAERRAKDTNDLLWMAIVGLTDQFVHARIQKDMY--LTHMW--ELHGNVVMKNADEDSAMQLDADTRVPVGERGRIAFEM-ELRFMLHRHWSLYEAMYYRDKSCGXXXXXXXXXXXXRLYEAMYDRAVCARVARHFNSCSKLRVWTTPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLTDIKYGSFHRYLGFKTPFSAADIVYCATTLIE-HRPDDPPGEI----------AADVSEEVLDARERDAFQRSFNDAYDALGGHNPKSLQRGLDLSMSLQRAVVQQAVSMLEKNTLLRTTHFRYAYIRATEAHCNVIAQPCALARLALLLMDVNRESKHWTGANRRPLILLAERRTAYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARVRLDGFDRNVVEVPRAHAGRFVEVVYETM 2484
            +TVLILVAP  DA+CAC+ILC +L+ D + +  +PVSGYADV AA   + +   +++++ +L CGA  N+EKL       A ++V D+HRPVHL N +                   +  +VVVLD      D++   SDG+DL             D D                          E+  ESD E      +P G                               XXXXXXXXXX        AE           ++RR+RLR YY     G  ++ +L+ L E  +      +W++ +G T      R+  D Y   T  +  +L      K    +   +     + P G    + +E  ELRFMLHRHWSL++AMY                         Y   V AR++          VW   G++R++ELLAK+G SLE CRQ + F S + R  L D +   G  Y L D    +FHR  G     SA D+  C   L+E H  +D    +          A D  +E   + E+ AF R F  AYDA  G +   L RG+  + +LQR VV QAVSM+EK  +    HFRYAY++A+    +V ++P AL +LAL L+ V+  +  W  +  +PL+LLAERR  +LV GV      + A   R   AF LAA  +    R D FD +VVEV      RFVE ++  M
Sbjct:   24 QTVLILVAPDTDAICACQILCRLLRDDNVPFCTKPVSGYADVRAATEDVSQQFSDIKTIIMLNCGATVNLEKLFDQ--SNATIFVVDSHRPVHLRNYH-------------------SPGRVVVLDGDA--PDDDDAPSDGEDL-------------DEDFM------------------------ESDLESDAELSSSDDEPEG----------------------------DEEXXXXXXXXXXXXXXXXXXAEA----------SDRRKRLRAYYDGTYDGPPSAALLFALTEACSTAEPTEVWLSALGTTGARAQWRLDDDAYDDFTDYFAAQLRHIDARKQTSGEPMPESGKGYQAPPGT---VTYERDELRFMLHRHWSLFDAMY-------------------------YSNYVAARLS----------VWKHDGKRRLQELLAKIGLSLEACRQTYAFLSLDERTSLRDNLKVQGPAYDLDDPFTATFHRVAGGGRNVSAHDVAACVEALLEGHFTEDASHALVRAAKKRRVEAVDTEDEA--SVEKRAFLRGFWHAYDACLGDDDALLSRGVHAACALQRGVVGQAVSMVEKREITTLRHFRYAYVQASN---DVFSKPLALRKLALFLVGVHTTNGKWVDSKAKPLVLLAERRDCFLVAGVD---GREGARKNRLAHAFRLAAEHIQTSSRQDLFDSSVVEVAHDDVQRFVESLHYIM 607          
BLAST of jgi.p|Trimin1|350569 vs. uniprot
Match: A0A067C2P5_SAPPC (Uncharacterized protein n=4 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2P5_SAPPC)

HSP 1 Score: 248 bits (634), Expect = 7.250e-68
Identity = 157/456 (34.43%), Postives = 238/456 (52.19%), Query Frame = 1
Query: 1150 AERRRRLREYYASDSYGLGASLVLYNLAERRAKDTNDLLWMAIVGLTDQFVHARIQKDMYLTHMWELHGNVVMKNADEDSAMQLDADTRVPVGERGRIAFEMELRFMLHRHWSLYEAMYYRDKSCGXXXXXXXXXXXXRLYEAMYDRAVCARVARHFNSCSKLRVWTTPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLTDIKYGSFHRYLGFKTPFSAADIVYCATTLIEHRPDDPPGEIAADVSEEVLDARERDA----FQRSFNDAYDALGGHNPKS---LQRGLDLSMSLQRAVVQQAVSMLEKNTLLRTTHFRYAYIRATEAHCNVIAQPCALARLALLLMDVNRESKHWTGANRRPLILLA--ERRTAYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARVRLDGFDRNVVEVPRAHAGRFVEVVYETMDA 2490
            ++RR  + +YY    YG  AS +LY LA +  + T D +W AIVGLT QFV  +I    Y   + +    V+  N   D    +D  T +P    G IAFE E RF+L+RHWSLY++M+Y +                  Y A                 +KL+ W   G+  +E  LA+MG SL++C+Q + F S  L+ KL +++ +   E+ L +I YGSF R   FK  + AADIV+  + L+E     PP  I   V  +V D    D     +Q SF+ A  AL   + +S   L++G+ L+M++Q+A+V   +S+L++  ++R  HFRY  +R +E    + + P  L++LAL L+DV+RE   WTG    P +LL   + R  YL+VGV CP    +    + G AF++AAA   A+   DGFD  V+E+       F+E ++  +DA
Sbjct:  290 SQRRIEILQYYRGSYYGAPASTLLYELASQVNQSTPDKVWFAIVGLTKQFVAQQIDAHNYNMLVQKFQDEVLSLNQAVDDVTDVDG-TALPTVHGGTIAFEEEYRFLLYRHWSLYKSMFYSN------------------YVA-----------------AKLKTWQPSGKDELEVFLARMGLSLKECQQSYTFMSMELKQKLREKLQEIAPEFELDEILYGSFRRQFEFKYQWCAADIVHGLSALLEA----PPYLIQKTVEHKVPDVLAMDESVPFWQHSFHIASQALPCKSKRSCTLLEQGIKLAMTMQKAIVSMGISILDRKLIVRIKHFRYVCLRLSEDDEAMFSHPSTLSKLALFLVDVHREQGKWTGKQASPFVLLCHLKARNVYLIVGVTCPERAGEIHRNKLGTAFKMAAAETGAKYTHDGFDTTVMEIQLDDIQGFIEQLHNVLDA 705          
BLAST of jgi.p|Trimin1|350569 vs. uniprot
Match: A0A1E7FER0_9STRA (CDC45-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FER0_9STRA)

HSP 1 Score: 239 bits (611), Expect = 3.410e-65
Identity = 259/744 (34.81%), Postives = 376/744 (50.54%), Query Frame = 1
Query:  352 TVLILVAPTADAMCACRILCSMLQSDVISYQVQPVSGYADVAAANAALVRGSG--ELRSVFLLGCGARRNVEKLLPDLL--EGA-HVYVADAHRPVHLANIYRCVRGGSGCGXXXXXAARLADRKVVVLDDGYLGADEEGQLSDGDDLSGAEDTDSEPDSDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXETSEESDGEAELDGGDPAGGXXXXXXXXXXXXXXXXXXXXHAGDXXXXXXXXXXXXXXXXRGRNTLTPAELHAIEEARRVPAERRRRLREYYASDSY-GLGASLVLYNLAER-RAKDTNDLLWMAIVGLTDQFVHARI---------QK------DMYLTHMWELHGNVVM-------KNADEDSAMQLDAD-TRVPVGERGRIAFEMELRFMLHRHWSLYEAMYYRDKSCGXXXXXXXXXXXXRLYEAMYDRAVCARVARHFNSCSKLRVWTTPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLTDIKYGSFHRYLGFKTPFSAADIVYCATTLIEHRPDDPPGEIAADVSEE---VLDARERDAFQRSFNDAYDALGGHNPK-SLQRGLDLSMSLQRAVVQQAVSMLEKNTLLRTTHFRYAYIRATEAHCNVIAQPCALARLALLLMDVNRESKHWTGANRRPLILLAE--RRTAYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARVRLDGFDRNVVEVPRAHAGRFVEVVY 2475
            T L+L     DAM + RIL  ML+SD I YQ+ P + Y+D+      +V   G  ++ S+ LL  GA  N+ +L    L  +GA  +YV D  RP+HLAN+Y                   + R +VV  D     +E    SDGD+LSG             D XXXXXXXXXXXXXXXXXXXXXXXXX         A  D                    XXXXXXX    XXXXXXXXXXXXX     +N ++P ELH+         +RR RLR+YY   SY G  A+ V YNLA + R  +  DLLW+A VG+TD ++H+R+         QK       ++  +M++   N V         N         D + T++ + E GRI  E + RF + RH +L ++M Y +  C                                   ++L+V+T  G Q++ E+LAKMG+ L++CRQ F F   NLR +L +++  +  EY L   ++ SF R  G+++  SA+D  Y  T L+E+   + P E+++   ++   ++D +E  A   +FN+AYDALG  +    +  GL  +M+LQ++++  AV + E+ ++    HFRYA++ +T    ++ ++P AL RLA  LM++NRE+  WTG   RPL+L+A+  R    L+VG   P    D +   FG  F+  A  M    + D FD NVVEV  A   RF+E ++
Sbjct:    1 TALLLCNADVDAMSSARILSYMLRSDGIHYQLLPCTCYSDLERQLTNMVSEGGMDDVSSIVLLNFGATYNLTRLFGKQLLQDGAVKIYVMDCRRPIHLANVY-------------------SSRSIVVFFDSAQKINE--MPSDGDNLSG-------------DEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANFD--------------------XXXXXXXXXXXXXXXXXXXXXXXXSPKTTQNKISPRELHS---------QRRNRLRKYYTDGSYFGSPAAFVAYNLATQLRYGEKGDLLWLACVGVTDAYLHSRLDMVGYAALAQKLSDLCVKLFPNNMYDRALNTVYAEDLIGKNNXXXXXXXXXDQNKTKIALSENGRIFSEKDFRFFMLRHSNLLDSMQYSEYVC-----------------------------------TRLQVYTKRGEQQLMEMLAKMGYPLDECRQPFPFMKPNLRRRLKEKLGTHAPEYNLDRFEFTSFTRVTGYQSMLSASDASYAVTALLEY---ETPNELSSGSDDDPTNIID-QENKAGVEAFNNAYDALGNLSSTIGIGAGLRRAMALQKSIIHTAVGLSERGSIALLRHFRYAHVTSTSRD-HIFSKPLALTRLAHFLMNMNRENGKWTGTKARPLVLIADKPRSKTCLIVGYEYPERAGDFVKNTFGPMFKQTAESMNGMFKFDSFDSNVVEVDAADVQRFMEQLH 641          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350569 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CA36_9STRA0.000e+0100.00CDC45 family n=1 Tax=Tribonema minus TaxID=303371 ... [more]
D7FQX6_ECTSI3.410e-14444.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TEF5_9STRA5.310e-9334.82Cell division control protein 45 n=2 Tax=Monodopsi... [more]
A0A1V9ZJC1_9STRA2.370e-7533.69Cell division control protein 45 n=1 Tax=Achlya hy... [more]
A0A024U0U2_9STRA8.830e-7436.40Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A1V9ZXW5_9STRA3.150e-7233.83Cell division control protein 45 n=1 Tax=Thraustot... [more]
A0A6G0XJ66_9STRA9.170e-7134.05Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8J2SY65_9STRA8.040e-6932.14Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A067C2P5_SAPPC7.250e-6834.43Uncharacterized protein n=4 Tax=Saprolegnia TaxID=... [more]
A0A1E7FER0_9STRA3.410e-6534.81CDC45-like protein (Fragment) n=1 Tax=Fragilariops... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_66contigContig_66:526559..538774 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350569|estExt_Genemark1.C_Ctg_660063
BRITEko00000,ko00001,ko03032
KEGG Pathwayko04110,ko04111,ko04113,map04110,map04111,map04113
KEGG koko:K06628
GOsGO:0000075,GO:0000076,GO:0000077,GO:0000082,GO:0000083,GO:0000228,GO:0000278,GO:0000724,GO:0000725,GO:0000727,GO:0000785,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003688,GO:0003690,GO:0003697,GO:0003824,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005656,GO:0005657,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006267,GO:0006270,GO:0006275,GO:0006277,GO:0006281,GO:0006302,GO:0006310,GO:0006323,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007346,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010948,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022402,GO:0022607,GO:0023052,GO:0030261,GO:0031261,GO:0031298,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031570,GO:0031573,GO:0031935,GO:0031938,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032991,GO:0032993,GO:0033043,GO:0033044,GO:0033260,GO:0033262,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0036387,GO:0036388,GO:0042770,GO:0043138,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044773,GO:0044774,GO:0044786,GO:0044843,GO:0045786,GO:0045787,GO:0045930,GO:0045931,GO:0045934,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051276,GO:0051716,GO:0051726,GO:0060255,GO:0060968,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0071103,GO:0071162,GO:0071163,GO:0071704,GO:0071824,GO:0071840,GO:0071897,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072428,GO:0080090,GO:0090068,GO:0090304,GO:0090329,GO:0097159,GO:0140097,GO:1900087,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902275,GO:1902292,GO:1902299,GO:1902315,GO:1902402,GO:1902403,GO:1902576,GO:1902806,GO:1902808,GO:1902969,GO:1902975,GO:1902977,GO:1903047,GO:1903463,GO:1903464,GO:1903506,GO:1990837,GO:2000045,GO:2000104,GO:2000112,GO:2000113,GO:2001141
Preferred nameCDC45
Descriptionmitotic DNA replication preinitiation complex assembly
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2475@1|root,KOG2475@2759|Eukaryota
Evalue5.59e-145
Seed ortholog2880.D7FQX6
Hectar predicted targeting categorysignal peptide
TranscriptId350891
TrackFilteredModels1
ProteinId350569
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350569gene_9695Tribonema minus UTEX_B_3156 geneContig_66 526559..538774 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350569Trimin1|350569|estExt_Genemark1.C_Ctg_660063Tribonema minus UTEX_B_3156 polypeptideContig_66 526559..538774 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9695_19exon_9695_19Tribonema minus UTEX_B_3156 exonContig_66 526559..526837 -
exon_9695_18exon_9695_18Tribonema minus UTEX_B_3156 exonContig_66 527181..527324 -
exon_9695_17exon_9695_17Tribonema minus UTEX_B_3156 exonContig_66 527899..527986 -
exon_9695_16exon_9695_16Tribonema minus UTEX_B_3156 exonContig_66 528375..528532 -
exon_9695_15exon_9695_15Tribonema minus UTEX_B_3156 exonContig_66 529159..529239 -
exon_9695_14exon_9695_14Tribonema minus UTEX_B_3156 exonContig_66 529594..529705 -
exon_9695_13exon_9695_13Tribonema minus UTEX_B_3156 exonContig_66 530341..530406 -
exon_9695_12exon_9695_12Tribonema minus UTEX_B_3156 exonContig_66 530575..530628 -
exon_9695_11exon_9695_11Tribonema minus UTEX_B_3156 exonContig_66 530746..530936 -
exon_9695_10exon_9695_10Tribonema minus UTEX_B_3156 exonContig_66 531598..531775 -
exon_9695_9exon_9695_9Tribonema minus UTEX_B_3156 exonContig_66 532086..532171 -
exon_9695_8exon_9695_8Tribonema minus UTEX_B_3156 exonContig_66 532655..532801 -
exon_9695_7exon_9695_7Tribonema minus UTEX_B_3156 exonContig_66 533608..533685 -
exon_9695_6exon_9695_6Tribonema minus UTEX_B_3156 exonContig_66 533740..533869 -
exon_9695_5exon_9695_5Tribonema minus UTEX_B_3156 exonContig_66 534271..534527 -
exon_9695_4exon_9695_4Tribonema minus UTEX_B_3156 exonContig_66 535283..535373 -
exon_9695_3exon_9695_3Tribonema minus UTEX_B_3156 exonContig_66 535487..535527 -
exon_9695_2exon_9695_2Tribonema minus UTEX_B_3156 exonContig_66 535750..535774 -
exon_9695_1exon_9695_1Tribonema minus UTEX_B_3156 exonContig_66 538488..538774 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9695CDS_9695Tribonema minus UTEX_B_3156 CDSContig_66 538488..538774 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9695 ID=mRNA_9695|Name=jgi.p|Trimin1|350569|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2493bp|location=Sequence derived from alignment at Contig_66:526559..538774- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGACGGCGGCGGGGGCGGCAGCGGCAGCGGCGGCGGCAGCGGCGGC
AGCAGCAGCGGCGTCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGTGGCGG
CGGCGGCAGTGGCGGCGTCAGCAGCGGCAGTGGTGGCGGTGGCAGCAGCG
GCGGCGGCTGCAGCAGCGGCAGCAGCAGCAGCAGCGGCAGCGGCGGCGGC
AGCAGCGGCGACGGTGGCGGTGGCGGCAGCGGCGGCTGCAGCATGGTGCT
GTGTCGTTGTCGGCAGCGCAGCGGCGCCGCAGTCGCCGGCAGCGTCCGCC
GCTGGCGGTGGCATCGCGCCCGTGGCGGGCACTGTGGCCATCATGCCCAA
AACCGTGCTGATACTGGTGGCGCCCACCGCAGACGCCATGTGCGCGTGCC
GCATACTGTGCAGCATGCTGCAGAGCGACGTCATCAGCTACCAGGTGCAG
CCCGTGAGCGGCTACGCGGACGTGGCGGCGGCGAACGCGGCGCTCGTGCG
CGGCAGCGGCGAGCTGCGCAGCGTCTTCCTGCTCGGCTGCGGCGCGCGCC
GCAACGTGGAGAAGCTGCTGCCGGACCTGCTGGAAGGCGCACACGTGTAC
GTCGCCGACGCGCACCGCCCCGTGCACCTCGCCAACATCTACAGGTGCGT
GCGTGGCGGAAGCGGCTGCGGCGGCGGCGGCGGCGGCGCAGCGCGTCTCG
CCGACCGCAAGGTGGTTGTCTTGGACGACGGCTACCTGGGCGCGGACGAG
GAGGGGCAGCTGAGCGATGGGGACGATCTCAGCGGCGCGGAGGACACCGA
CTCGGAGCCAGACAGCGACGACTCGGATGAGGGGCAGCTGAGCGATGGGG
ACGATCTCAGCAGCGCGGAGGACACAGACTCGGAGCCGGACAGCGACGAC
TCGGATGAGACCTCCGAAGAGAGCGACGGCGAGGCGGAGCTGGATGGCGG
GGACCCCGCTGGCGGCGATAATGATGACGATATCAATGACGACGGCGGGG
GCGACGACGATGGCGCCAAGCGCCGCCACGCGGGTGATGGCGACGCCGAT
CAGCCGGAGGGCGGGGGGCAGAGACGGCGCAGGAAACGCGGGCGAAACAC
CCTCACGCCGGCGGAGCTCCATGCTATCGAGGAGGCGCGCAGGGTGCCGG
CGGAGCGGCGGCGGCGCCTGCGCGAGTACTACGCGAGCGACAGCTACGGG
CTCGGCGCGTCGCTCGTGCTGTACAACCTGGCCGAGAGGCGCGCCAAGGA
CACCAATGACCTGCTCTGGATGGCCATCGTGGGGCTCACGGACCAGTTCG
TGCACGCGCGCATACAGAAGGACATGTACCTGACGCACATGTGGGAGCTC
CACGGCAACGTGGTCATGAAGAACGCGGACGAGGACAGCGCCATGCAGCT
GGACGCCGACACGCGCGTGCCCGTGGGCGAGCGCGGCCGCATCGCCTTTG
AGATGGAGCTGCGCTTCATGCTGCACCGCCACTGGTCCCTGTACGAGGCC
ATGTACTACAGAGATAAGAGCTGCGGCCACCGCCACTGGAGCCTGTACGA
GGCCATGTACTACAGGCTGTACGAGGCCATGTACGACAGGGCCGTGTGCG
CGCGGGTGGCACGTCACTTCAACTCGTGCAGCAAGCTGCGCGTGTGGACG
ACGCCAGGGCGCCAGCGCATGGAGGAGCTGCTGGCCAAGATGGGCTTCAG
CCTGGAGCAGTGCCGGCAGAAGTTCCGATTCACGAGCGCGAATCTGCGGA
ATAAGCTGACGGACCAGATTGACAAGTACGGCGAGGAGTATGGCCTCACC
GACATCAAATATGGCTCCTTCCACCGCTACCTCGGCTTCAAGACGCCCTT
CTCCGCAGCGGACATTGTGTACTGCGCGACAACGCTCATCGAGCACCGCC
CGGACGATCCGCCGGGCGAAATCGCCGCCGACGTGTCCGAGGAAGTTCTG
GACGCGCGCGAGAGGGACGCGTTTCAGAGGAGCTTCAACGACGCGTACGA
CGCCCTCGGAGGGCACAACCCCAAGTCGCTGCAGCGCGGCCTCGACCTCA
GCATGTCGCTGCAACGAGCGGTGGTCCAGCAGGCCGTCTCGATGCTCGAG
AAGAACACGCTGCTGCGCACGACGCACTTCCGCTACGCGTACATCCGCGC
GACGGAGGCGCACTGCAACGTCATCGCGCAGCCGTGCGCGCTCGCGCGCC
TGGCGCTGCTGCTGATGGACGTGAACCGCGAGAGCAAGCACTGGACGGGC
GCGAACCGCCGCCCGCTCATCCTCCTCGCGGAGCGGCGCACGGCGTACCT
CGTGGTCGGCGTCGGCTGCCCCACGAGCGTCGACGACGCGCTCGGCTGCC
GCTTCGGCGCCGCGTTCGAGCTCGCGGCGGCGCGCATGGCGGCGCGCGTG
CGCCTCGACGGCTTCGACCGCAACGTCGTGGAGGTCCCGCGCGCGCACGC
GGGGCGCTTCGTAGAGGTCGTCTACGAGACCATGGACGCGTGA
back to top

protein sequence of jgi.p|Trimin1|350569

>Trimin1|350569|estExt_Genemark1.C_Ctg_660063 ID=Trimin1|350569|estExt_Genemark1.C_Ctg_660063|Name=jgi.p|Trimin1|350569|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=831bp
MATAAGAAAAAAAAAAAAAAASAAAAAAAAAVAAAAVAASAAAVVAVAAA
AAAAAAAAAAAAAAAAAAAATVAVAAAAAAAWCCVVVGSAAAPQSPAASA
AGGGIAPVAGTVAIMPKTVLILVAPTADAMCACRILCSMLQSDVISYQVQ
PVSGYADVAAANAALVRGSGELRSVFLLGCGARRNVEKLLPDLLEGAHVY
VADAHRPVHLANIYRCVRGGSGCGGGGGGAARLADRKVVVLDDGYLGADE
EGQLSDGDDLSGAEDTDSEPDSDDSDEGQLSDGDDLSSAEDTDSEPDSDD
SDETSEESDGEAELDGGDPAGGDNDDDINDDGGGDDDGAKRRHAGDGDAD
QPEGGGQRRRRKRGRNTLTPAELHAIEEARRVPAERRRRLREYYASDSYG
LGASLVLYNLAERRAKDTNDLLWMAIVGLTDQFVHARIQKDMYLTHMWEL
HGNVVMKNADEDSAMQLDADTRVPVGERGRIAFEMELRFMLHRHWSLYEA
MYYRDKSCGHRHWSLYEAMYYRLYEAMYDRAVCARVARHFNSCSKLRVWT
TPGRQRMEELLAKMGFSLEQCRQKFRFTSANLRNKLTDQIDKYGEEYGLT
DIKYGSFHRYLGFKTPFSAADIVYCATTLIEHRPDDPPGEIAADVSEEVL
DARERDAFQRSFNDAYDALGGHNPKSLQRGLDLSMSLQRAVVQQAVSMLE
KNTLLRTTHFRYAYIRATEAHCNVIAQPCALARLALLLMDVNRESKHWTG
ANRRPLILLAERRTAYLVVGVGCPTSVDDALGCRFGAAFELAAARMAARV
RLDGFDRNVVEVPRAHAGRFVEVVYETMDA*
back to top

mRNA from alignment at Contig_66:526559..538774-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9695 ID=mRNA_9695|Name=jgi.p|Trimin1|350569|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=12216bp|location=Sequence derived from alignment at Contig_66:526559..538774- (Tribonema minus UTEX_B_3156 )
ATGGCGACGGCGGCGGGGGCGGCAGCGGCAGCGGCGGCGGCAGCGGCGGC AGCAGCAGCGGCGTCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGTGGCGG CGGCGGCAGTGGCGGCGTCAGCAGCGGCAGTGGTGGCGGTGGCAGCAGCG GCGGCGGCTGCAGCAGCGGCAGCAGCAGCAGCAGCGGCAGCGGCGGCGGC AGCAGCGGCGACGGTGGCGGTGGCGGCAGCGGCGGCTGCAGCATGGTGCT GTGTCGTTGTCGGCAGCGCAGCGGCGCCGCAGTCGCCGTGAGCGCGGGAG CTGTATGATGTGCTAGAGCAGCATTGCAGCATCTGGCGTGGACAGGCTGT GGGCAGGCAGATAGCCGCAAGCGGTCGAGCGTATAGAGCTGGCTTTGATG AGGCGGCCAATGCGCTGTGCCGACAACAGGCAGAGTACGTATCAGTAGTG ATAGCAGCAGCAGCAGCGGTAGTAGCAGCAGTGATAGTAGTAGGTGCTGA GGGGAAGGGGACGGGGAAGTTGAGTATGCGCTGCTGCTGCTGCTGCTGCC GCCGCTGCCGCCGCCGCTGCAGTTTCCAGCAGCACCTCACAGTGCCGCCG CGCAATAGACTTGCTTCAGTACTGGACCCTAGGGGTGCAAGGTAGGCGAT GGTGACGAGGGTAGTGTGTGCGCCGCAGTCCGCGTCGCCCTTTTTGCGCT CTCAGTGTCGCAGCACATGACCATGCTTGGGCCGTGCGGCGACACAGGGG CAGGCACCCAGATGCGCGCTTCACGCACTGTTTTACGCCCCCCATCGCAT GCATAATTTGGCAGCGTGTTTGTTCACAATTAGTAGTTCGGTGTGGTGCT GCCTGTGACAGCATAGTACAAAGGGCGCGCGCGCATAGTCTGAGGCGCCT GCACTCGCTTGTTTGTGCGCAGCGGCGCACACGCGGAGGACCGAGTCTAG GCTGAGCCAGCATGCAGAACAGCAGTGTCAGGGGAGGTGTAGATGCACAT AGGTTCGCACATTGGTTTGGTAGGATAGCTCTGCAATCAGTAACCTCCAG CATCAGTTCAAGCATGAATGTGAAGCATGAGCATCAGTTACGCTTATATG TTGTCTCTTCTTCTGTGTGCTTGTCCGCGCATGTGGCTGGGTGGCTTGTT CGGTTATGACTGTGGGCAACGGCCCTTGGAGCCATGTCAAGTTGTGATGA TCTGCACACACACAGACTTCACAGCGGGTGTCATCACACACCATCACTGC GCTCTTGTTCTCTCGTTCTGGCCTTGTCGTGTCTACCATGTGTGTGGCTT CGCTGGAAAATATTTTTCTTTAAATGGTGCACTGCCTGCATGCACACCAT GTTTGTCGAGACGTAATGCAGTGTGTAGTATAGAGTATACCATCTACCTG ATTGCAGAAGCGTGTGGGAGGCGGGCTGTGCGGGTTTGCTGGTACGCATG TTGTCACATGGTATCATGTTTCTTTTCAAAAAAAAGAGGTGACGCAATGT GCCTGCCAAAACAACATCCACGAGCCGATATGTGACAGCATGTGAATTTT CAGTACGTTTACGTAAACAAGAGGACTCTATTGCCATTGCCCCCTTGATG TTCAATTTTTTTTAACGCCCCGGGCCAACTTCAAGAATTCAAACGTTTTT TCGCGCGCTGGGTTGTTTTTTTTTTGTTCAGCATCAGCACTGCAGGCGCG CTGGCTGGCGAGACAGAGGAGAGGAGTGCAGTGATTCACGGCAAGGTCAT TTGATATTTAGCTCGGCTAGCGATGCAGCAGCGCTTGGGGCGGAGACAGA GGTGTGCTAGCAGCAGCATCGCGAAGAGGGCGTAAGGAGCACCTTCGGGA CAGGCGCGGGTAGGCGCTGGCAAGGGATGCTTTTAAAGCACGCCCAGCTG CACGCGGCGTATGAGCAGGTTTACCAGGATGCGGCAGGAGCCAGCGGCGC GTGCAGGTGTGTGTTGCGGGTTGGCTTACGTATCACCTTCACAGCGCCTG GGAATGTCGAGCTTGATGAGTCTAGTGGATGCAGTGTTGACCATGCGAGC CTGTTCCACTGAGCACAAGTGACTAGGCAACAGCCGATCCGTTGTTTGCT GTCTGTAACATTCATGTGCAGCATTTTCAAGGCACTGCTGCACGCACACG AACTCAGGAGGTACAGTGTGTGTGTCGAGCCCGCCCGAGTTTCTCCCTCT CATTATTCAGCATTGCATGTATTGCACAAGGTTGCAGATGCCAGTTACAG CTGGTGCTTTGGGTTGCTTCACTGTAAATGCAGCAGCTTCTTGGAGGACG AGGAAGTGCACATGTTCTGTGCACTCGTCGTACACCTCAAGTCAAAGTAT TGCAGGCCGCAACACGTTTGTGCAGCGCGCGCGTGAGCACACGCCTCTGG CGCATGAGCTGTTGCATACGGCAACTCAAATACCGTGCAGGTGTAATTGA TTCACCTGAGTGCATTGTTGGCGGATACAGTATTATCAGTTGGCATTCTG CAGGTTCAATCCCCCTGTCGGTGTAGTATACTCCTCGATAATCGCACTTT CAGATATCAGGTGACAGCACACCAGACCATAACGTAGATCAGATGGCGCA GCGTGCACGTTGATGGCCTGCATCCATTGCTGCCATTGCTGAAGAGCACA AACTCCGCATCGAGGCAAGGCCTGGCCTGATGGTCGCTGCTGTAGCCGCT GCTGCCAGCGCAACGCCGTGGCCGCGATGCACCATGCTGCTCGCGTGGCA GTCACCAGTAGACCCACCACAGTGAAAAGTGACACAAAACGCCATCACCT GTATCACGGCGCTGGGCGATCACCTGGCGGCGCGAGCCCAGCATGCAGTG CTACTCAGAGCAGCGGTAGCAGCCGCCATGTGCGTTCGCCACTTCAGACG CGTAGCGAACGCGCCTCGTGCCCGCAGTTACCGCAATGCCACGGCACGCG AAGTACAATTACGTCACCGCGTCGTCCCAGCGCCGCGCTAGCTGCTTCAG GGCAGCGTCCGCCGCTGGCGGTGGCGTATGCCGCTGCGCTTGCAGCCCTC GCGCGATGCCTGGCGGCGTCCTCCGCGGACGCCACATAGAAGGGTCTGTC ACATCGTAAGCGCGACAGAAGCGGATTTCACACGCACGGTGACCGCGGCC GCTGATGCCACTGCTTCGTTCAGGCACGTGTGCAGGTCGTCTCACGGCGG CATCGCAGCTGCCGCCTCCTGCTGCTGCCGCGCAGCGTGCCGGACAGATC GCGCCCGTGGCGGGCACTGTGGCCATCATGCCCAAAACGTGTTGGCAGGC ATCGCTTCATATTCTTGTACTTCCGGCCTCCGCGTTGCAACCGCCCATAG TTGCTGACGAGCGCTGCTGCCGTTGCCGCTGCCGCTTCTGCCCCCGCGCA GCGTGCTGATACTGGTGGCGCCCACCGCAGACGCCATGTGCGCGTGCCGC ATACTGTGCAGCATGCTGCAGAGCGACGTCATCAGCTACCAGGTGCGTCC GCGCGCATGCGCTTGCCGCTGAGCGCTGCCTTGATGACTTCAACTTTGAT TACTTCAACATCAGTGCAGCCTCAAGTAACACGGGAGACGCTCCACACGC GATGGTCGCGGTCATATTGCAAAGTGCTGTCCGCAGCCAAGTGCGCACTC TCTGATTGGCACTTGGGAGTGCCCAAGTTGGCCCAACCCACGGTGTTGAG CTTACACTCTAAGTGTTGCAGCCAGTTGTGCAGACCGACGTCGTGCTGCA AAAACTTCATGTTGCGCTCCACTGTGTAGGGACAACTGCTTGTGAACGCT GGTTGATTACCTGCGCCTATGCCATTAAGCCTGCTTGCCTGACTTGACCA GGTACTTCGGCATGTATGAAGCAGTTACTCAATCGGGTACTGGCACAGGC AATGACTGAATGTTTGCTTCGCGGATTGCGGATCTCGCCCCATCCAGCAG AGCAGTGCATACGAGCTCTCTTTTTCCAGTGGCCCGACGCCCTCATCTGT GCATGGCAGCGTAATCGCTGTGCATGCCGCCTGCGGCAGGTCTGCCATAA ATGCACCGCACAGCATCACGCTGACGGCACGCCGGTGCGGCTGGCCTGTT AGAGGTTCGCCACGTGACATTCTGCCTGGCAAGGTTTGCCAGCGACCTTC TGAGCAGCGCCTGCTGAACTGTCCGGGCCACGTGATGTCCTGCCTGGCAA GGTTCGCCAATAACCTTCTGAGCACATGCCGAACTTTCCGTGAGCAGGTG CAGCCCGTGAGCGGCTACGCGGACGTGGCGGCGGCGAACGCGGCGCTCGT GCGCGGCAGCGGCGAGCTGCGCAGCGTCTTCCTGCTCGGCTGCGGCGCGC GCCGCAACGTGGAGAAGCTGCTGCCGGACCTGCTGGAAGGCGCACACGTG TACGTCGCCGACGCGCACCGCCCCGTGCACCTCGCCAACATCTACAGGTG CGTGCGTGGCGGAAGCGGCTGCGGCGGCGGCGGCGGCGGCGCAGCGCGTC TCGCGTAGCGCTCGCTGAGAGTGGCGCAACGCCCTGTGTTGTCTGGCCAG CGTTAGCAGGGAAGCTGCGGGGGCGTGTGCGCGTCCTGAGAGCGGTTGGA TTGCATGCTCTTGGGCATTCCAATGGACCCGAGTGTATTCAGGACTCTCG ACACGGCGACCTGCGGGTATCAATGCTGTGCGCCGCATAGCAGCGGCCAA ACCATGTTGGCTGGCGGCCAGCACACTTGGTATTGGACGTTGCATGGTGA ACTTCAACGAGTCCGTCACTGCCGGGTTTTTAGGATCGGCTGCGAACGCC GCCCTCCTTTTGCGGAGTATCTTCACACTACAGTACCATTAGCCTGCCTT TTCAACATGTGCTCGTAGAGTCACGTGCTGCTCTGCTGCTCCTCCAAAAT CGCAGCGACCGCAAGGTGGTTGTCTTGGACGACGGCTACCTGGGCGCGGA CGAGGAGGGGCAGCTGAGCGATGGGGACGATCTCAGCGGCGCGGAGGACA CCGACTCGGAGCCAGACAGCGACGACTCGGATGAGGTGAGTACGCGGGGT AGGTAGGTACGGTGCGTATAATGTTGAAGTTGGTAAGAGGGGCAGCTGAG CGATGGGGACGATCTCAGCAGCGCGGAGGACACAGACTCGGAGCCGGACA GCGACGACTCGGATGAGGTCAGTACGCGGGGTAGGTAGGTACGGTGCATA CAATGTTGAAGTTGGCGCTGTGGGCGCGTCACAATCGCGGCAAAACGCGT TAGTGGAGTTCCCTGCGTAGCCATTGGTCATTGCTGCCGGTGGCCCTGGC TCTATGTGCCAGTGATATATGTGCCAGTGACATGTAGACTACTCTGGTCT CTGCTTGTGGCTTCGCGTACGCAGAGTTGTGTGCTAGTATTGTTGCGGTT GAAGTAGTAGGTGCCACTGAGCAAGTAGCTTCGGATTTGAAATATCCACA CAGAAGCTGACTGCGCATGCTGCCGTAAGGTGCTGTGAAGCACATCAATA CAGTGCACATGCGGTATGGCAAATCTGAGCTGGTCATGAAGTGTGCAGGT TATGAGCTTTATCGGTAGCGCATGCTACACTTGAAGTTGCTCAATTGCAA CTTGAACATGAACTGGTCTTGGACAGGCAGTCACCTCACACCGCCCAGCA CTGTCTGGGATGTGGAGACGGGCTGCAGTGCCCTGAATGAGGTGCACCCG CGGTAACTGCAAGTTGATGAAAGCGCCGCTTTCGCATGCGTGCGCGCCAC TGCCGCGGGAGCACTGCCCGCCGACATGCGTGCCGGCATGCCACATGATT TGACAACAGGCACATACATCGTCCGCACACGTGCTCTACCCGCAGCAGAC CTCTGATCAAAACATGATTGGGTTGAGCTGCGGCGCCGGCGGGGACCCAA TACAAACATGCCCTGTCCTGAATCATAATATACCCACCTGAGCACTATCC TTACCCCCCCCCCCCTTCGGCAGACCTCCGAAGAGAGCGACGGCGAGGCG GAGCTGGATGGCGGGGACCCCGCTGGCGGCGATAATGATGACGATATCAA TGACGACGGCGGGGGCGACGACGATGGCGCCAAGCGCCGCCACGCGGGTG ATGGCGACGCCGATCAGCCGGTCAGTGCGTGTTTGTATGCGTGCATGTAT GGATGGATGGTGCATGTGGGCAATGGTAGGGTACAGCAAAAACATTGGGT GAAGCTGTTGGCCTGCTTGATGGCGAATGCATGACGTTGTTGATGAATGC AATGGCCAGCGCTGGCGATCAGGCGACAGCGCAGCCGTCGACCGCAGGCT AACCAACAGACAGCGCCGGCCTGCATCCGCGAGTACGTCGGACACGGTTC GGGATATGTAAGGAGTACCCAACCTGTTTCACGTCTGACACTGCACCTTG AAGTGCATGATCTGACACCGAACCCCAACTCTTAACCCTAATGATACCGA CCCCTAACCCCAACCCTGATGCAGGCAAATGGCTGTGCTCCACCGCCTGA GCATGAGCAGGCCATCAGTATTTCTAGCTACGTTCAAACTTGACCTTGGT ACGGAACTGACTTCATGTACTGTTGATGTTGCGTCGTTGGTGACGCTTTG CAGGAGGGCGGGGGGCAGAGACGGCGCAGGAAACGCGGGCGAAACACCCT CACGCCGGCGGAGCTCCATGCTATCGAGGAGGCGCGCAGGTGACGGAGGA AGTTCCTGGGATTGCTGAGCGAGGGAGAGTGAAGGCTCTGGCATGCTTGC ACTCTTGTGCTGACTTGAAGTACAAGTGTACAGTCTCACGACAGTCACTG GTGAATGGCATTCGCCGGGACCGTTGCGGTGCGCATACTTGCACATACAT ACATACCCCAGAGAGCAGCGGCGGCGGCCGCACGAGCGCCCGCCACGCAA CCGACAGTATCAGCTTTGGATTGTTGTAACGGGTCTACTGACCCTGCCAC TGTCACTGAATCAGCTTCGCAAACCGCAACGCTGCGCCCGCGTGCGCAGG GTGCCGGCGGAGCGGCGGCGGCGCCTGCGCGAGTACTACGCGAGCGACAG CTACGGGCTCGGCGCGTCGCTCGTGCTGTACAACCTGGCCGAGAGGCGCG CCAAGGACACCAATGACCTGCTCTGGATGGCCATCGTGGGGCTCACGGAC CAGTTCGTGCACGCGCGCATACAGAAGGTGCGTGCAGGCGTGCATAGGGT AGGCATGTGTGGTTCTGATGCGCAGCAGTCACAGACCAGTGAATGCACAG AAAGGTGCAGTGCGTCGGGGGTAGGCAGGTATGGGTTTGATCAACTGCAG CACCTATTGGATTGTAGGGGATCATGGACCGGTTTGTGCACGCGCGCATA CAGAAGGTGCGCGTGCGTGCATTGGGTGGGCAGGTATGGGTAGTATGAAC TGCAGGACCTACCATGTTGTAGGGGGTCACATGGACCAGTTCGTGCACGC GCGCATACAGAAGGTGCATACGTGCATAGGATAGGCAGGTATCATCATGA TAAACTGCAGGACCTACGAAATTGTGGGAATCACAGACCAGTTTATGATG AACTGCAAGACCTGCCAGATTGTGGGGCTCAAGGACAGGACCAGTTTGTG CGTGCACGCGTATAGTGCACGCGTACAGTGCACGTGTTTATACCTGCGGC ACAAACCGGGGCTTAACGGCGAGACCGGCATCAACAACGCCAATATATGC AGATTCGATGCACCGCCCGCGCTGGCACAGGTTTATGGCGGTAGTTAGAG CTGCAAGAGAGCGAATACCTCGTGTATACAATCACCGCACCGGCGGCGCC GCTCACAAACCCCGCCCCGTCCCCCGACCCTACCTCAGGACATGTACCTG ACGCACATGTGGGAGCTCCACGGCAACGTGGTCATGAAGAACGCGGACGA GGACAGCGCCATGCAGCTGGACGCCGACACGCGCGTGCCCGTGGGCGAGC GCGGCCGCATCGCCTTTGAGATGGAGCTGCGCTTCATGCTGCACCGCCAC TGGTCCCTGTACGAGGCCATGTACTACAGGTGCGTGCGCGTCAACTTCAA ATCATGTAGGCGCTCTCTCTGTCAATGTTATGATTTTGCGCTGGTGAACG TGGCCATTAAGGGTGCTGGTGCGCGAGCGCGGCCGCATTGCTTTAGAGAT AAGAGCTGCGGCCACCGCCACTGGAGCCTGTACGAGGCCATGTACTACAG GTGCGTGCGGGAGCGAAGGGGGCGACACGCCAATTTCAAATGATGTACTT CAAAGAAGTAGGTGACGCAAATGTGAAGTAATTTTGGGCTGGTGAAAAGT CGCCGGTTCGGGTGCCCGTGGCGAGCGTGGCTGCATTGCCTTTGATTCAT GCTGCAATGCCACTGGAGGCTGTACGAGGCCATGTACGACAGGGCCGTGT GCGCGCGGGTGGCACGTCACTTCAACTCGTGCAGGTGACACTCCTGTGTA TAGCCAGCATTTGGCGCCTGGCGCACGCGCTACAGGCGCAAGCACAGGCG GCGGGCGCGCGTGCCTGATCTGCAGGAGTGGCACGTCAACTTCATCTTGT GTACGACGCTCCAGATTTGTTTCGGACGTGTTGCGCTGGTGGAATGTAGT CGTCGAGGGCGATGCTGCGCGAATTGGCGTTTATTGCAGAGGTGCTGCCC GTACCGTACCCGCCACTGTGTGCGTCAGGTGAGGCGAGGGAACTGCCTGC CGTGACACATCAGAACCCAGTGTGCGCTGTGGGTATATGGCGCGCTGGGT GCGAGCACGCACGCATCTCATTTTTGAGGTGGAGCGGCGGGCCAACGCGG TGCAGCACTTGCTACATTCGGGGGGGCATGCACTGCAGGTGCATGGCATC ATGTGACCAGCACCGCACACTCTCAAATCTCTGATGTCGCTGAAGTTTCT GCGTTCAGTGCCTTCCAACCACGTGAAGTTGCCAGGAGCGCCCGTGGTGC GCATATACGCGGCGAACGCGCCGCCGTGCACTCCGTTCACCTGTTGCCCG CTCACGTAATCCTCCCCCCCCCCTCCCCCTTCACACACACACACACACAT GCAGCAACTATGTGGCCAGCAAGCTGCGCGTGTGGACGACGCCAGGGCGC CAGCGCATGGAGGAGCTGCTGGCCAAGATGGGCTTCAGCCTGGAGCAGTG CCGGCAGAAGTTCCGATTCACGAGCGCGAATGTGAGCCGGCTTGAAGTTC ACCAGATGTGCGGTGTGATGTAGTTCAAGTAGTGTATCGCAAAATGCAAC TTCAAGTGCAGACCGTTAAGTCTGGACCAGTGCTGGTACGTGTTGCTGAT TCTCCATGAATACATGCGATGCGTGATGGCAATGACAGCATAACGCAACT CTGACCGGCAGCAGCGTGTGACAATTGCCACAACCGCCGCAACCACTGAC TTGTGTACCAATGTAAGACAAGACCTATTCAACTACTTCAAAGTATTAGT GTACCTCAAGATGTACTTAATGTCCTGCAGCACTCAGGGGGCCTGAGCTG ACGTTTACCGTTGCTTTTCATCCCTCCTGCCGCAGCTGCGGAATAAGCTG ACGGACCAGATTGACAAGTACGGCGAGGAGTATGGCCTCACCGACATCAA ATATGGCTCCTTCCACGTAAGTGTGACGTGTACGGCCCACAGTATGGGCA CTCAGAGTTTAATAAGGATCCTGTGACATGGCGTATTTTGCTACAACGGC AGCGCGCGTGGAATGCTGAGTAGTGCGCTCCCGAGCGGCTCAAGCTCACT GTGTGCAACAACGATGACATGAGTAACGGTAGCAGCATCGCGCCGGCTTC CAGCTCCGCTGTGGCAGCGGCAGACACTGTGAACTGGCCGACGGCTTCAT CCAATCTTTGAAACACAGCATCGCTAAACATAGCGTCGCTCCGCTCAGCA GCCTCTAACCGAGGATCATGAGCACACGACTGCATCACGAAGGCTGTTGA CTGTTCACGTTTGCCTGCCTGCACCGTCCAATCAAGCGACGTTGCCTCTG TCTTCAGACGCCTTCGCGGCGGCGGCTGCGCTGCCTGCGTCGCGACTCGC AGCAGTGCTCATCAATGCTTAGGGCTAGGGTTAGGATCAGGTAATGCAGC AGCGCTCACTGAGCTTTCACATGTTTTCCGCGAGCGCGCCACCCCAATCC CCGGTGCACGCAACCTTACGATCAGGGTTAGGTTGCTTCGTCACGCACGT GCTTACCGCCACGCCCCCTTTTTGCCCCCGCCGCCGCCGCAGCGCTACCT CGGCTTCAAGACGCCCTTCTCCGCAGCGGACATTGTGTACTGCGCGACAA CGCTCATCGAGCACCGCCCGGACGATCCGCCGGGCGAAATCGCCGCCGAC GTGTCCGAGGAAGTTCTGGACGCGCGCGAGAGGGACGCGTTTCAGAGGAG GTATGTATGCGCGGCGTGCACGCCGAGTGGCTAGTTTACCTGAACTGTTG TGAGCTCACTTGGACTGTCTCGAGTTCACGTGAACTCTCTTGAGTTCCAG GTGGACTGTCTTGGGTTCACCTGAACTGTCTTGACTTCATCTGGACTGTC TCGAGTTCACCTGGTCTCACAATTGAGGTCTGTCTTTGACAGTGCAGGTG GGCGCGAGATCAGATGCGCGCTCTGCCACACAAAACTCTCTCAGTGCATC AACCGGAACACAGTTTTGTGCACCATTGCATGTTGCCTTGGGCGCTGCCA AGGCACGCGCATGTAACCCTCTGGCCCCTTCTGTGGCAACGTATGCTTAC AACTGCGCCGTTGCTCGCTGCCACCTCCTTTCGCGCAGCTTCAACGACGC GTACGACGCCCTCGGAGGGCACAACCCCAAGTCGCTGCAGCGCGGCCTCG ACCTCAGCATGTCGCTGCAACGAGCGGTGAGCGTCGCAGCGCTCAGTGGA CTTGAAGTTCACGCACAGCGTACCCTGTGCTTCAGGTCATGCGCAGCGCC TGGCACCAACCTGCATTGAGGCGGCGTGCACGTGCTGGCAGGCAGCGCTC ACTGCAGCGCATTACTGCACAGTGTGCAGGAAACACCTTCATACCTTGAT CTGGATAGCAATGCGGGCCTGATGTTGAGGCGGCTGTGAGTGTAGCGCGA AGTCAGTGCGCTGGTGTAGCCGCAGGAACAGACACAATCGCCCGTTGTGT ACTGTGGCGCATCATTTGAGCGGTGTTGGAGACATTGACGCACTTCTGCT CTTGTGCCTGCAACGATTGTGCGCGTCAGCTGAGCGATCGTGTTGGGTGT CATGGCCGCCAGCCTTGTGTTTGCGTTGACAGAATTGCTGCACGCCATGC CATTGTGACACACACCACCCCCCGGCTTCAGGCTCGGCGTTGGGGTTAAG ATCAGCTGCAGCAAGCTCTACTAGGCTAGGCTTAGGGTCAGGGGTACGCT GCACCGCCGTGCTCACCTACCCTCCTCTCTGTTGCCGAATGCTGCTGCAG GTGGTCCAGCAGGCCGTCTCGATGCTCGAGAAGAACACGCTGCTGCGCAC GACGCACTTCCGCTACGCGTACATCCGCGCGACGGAGGCGCACTGCAACG TCATCGCGCAGCCGTGCGCGCTCGCGCGCCTGGCGCTGCTGCTGGTGAGC GCTGACACCTGCATGGCGCATGTATGCACATACATGTGTACGATGTATAC ATGCAGAGGCCCCCATCCCATATGCCGCTGGCAGGCCTGCACCCACTGCC GTTGGCAGCAGTGGCGCCTCTGCACGGTGCGATCGCTTGTCAGCTAGCGC AGCCCTCGGCAAGGCGGTAGTGCCATTGCCACGAGAGAGACCGCGTCTGT CAGGTTACGACTTGCCAACGAGACAGGGTCAGGGCTACCCACCCTGAATC CCTGCAAGTCGACGACGATGGACCCCTGAGTTGAACGCCCCCCCCCCCCC CCCCCCTCCCCCATCCCCCTGCTCCCCCCCCGCGCAGATGGACGTGAACC GCGAGAGCAAGCACTGGACGGGCGCGAACCGCCGCCCGCTCATCCTCCTC GCGGAGCGGCGCACGGCGTACCTCGTGGTCGGCGTCGGCTGCCCCACGAG CGTCGACGACGCGCTCGGCTGCCGCTTCGGCGCCGCGTTCGAGCTCGCGG CGGCGCGCATGGCGGCGCGCGTGCGCCTCGACGGCTTCGACCGCAACGTC GTGGAGGTCCCGCGCGCGCACGCGGGGCGCTTCGTAGAGGTCGTCTACGA GACCATGGACGCGTGA
back to top

Coding sequence (CDS) from alignment at Contig_66:526559..538774-

>mRNA_9695 ID=mRNA_9695|Name=jgi.p|Trimin1|350569|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2493bp|location=Sequence derived from alignment at Contig_66:526559..538774- (Tribonema minus UTEX_B_3156 )
ATGGCGACGGCGGCGGGGGCGGCAGCGGCAGCGGCGGCGGCAGCGGCGGC
AGCAGCAGCGGCGTCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGTGGCGG
CGGCGGCAGTGGCGGCGTCAGCAGCGGCAGTGGTGGCGGTGGCAGCAGCG
GCGGCGGCTGCAGCAGCGGCAGCAGCAGCAGCAGCGGCAGCGGCGGCGGC
AGCAGCGGCGACGGTGGCGGTGGCGGCAGCGGCGGCTGCAGCATGGTGCT
GTGTCGTTGTCGGCAGCGCAGCGGCGCCGCAGTCGCCGGCAGCGTCCGCC
GCTGGCGGTGGCATCGCGCCCGTGGCGGGCACTGTGGCCATCATGCCCAA
AACCGTGCTGATACTGGTGGCGCCCACCGCAGACGCCATGTGCGCGTGCC
GCATACTGTGCAGCATGCTGCAGAGCGACGTCATCAGCTACCAGGTGCAG
CCCGTGAGCGGCTACGCGGACGTGGCGGCGGCGAACGCGGCGCTCGTGCG
CGGCAGCGGCGAGCTGCGCAGCGTCTTCCTGCTCGGCTGCGGCGCGCGCC
GCAACGTGGAGAAGCTGCTGCCGGACCTGCTGGAAGGCGCACACGTGTAC
GTCGCCGACGCGCACCGCCCCGTGCACCTCGCCAACATCTACAGGTGCGT
GCGTGGCGGAAGCGGCTGCGGCGGCGGCGGCGGCGGCGCAGCGCGTCTCG
CCGACCGCAAGGTGGTTGTCTTGGACGACGGCTACCTGGGCGCGGACGAG
GAGGGGCAGCTGAGCGATGGGGACGATCTCAGCGGCGCGGAGGACACCGA
CTCGGAGCCAGACAGCGACGACTCGGATGAGGGGCAGCTGAGCGATGGGG
ACGATCTCAGCAGCGCGGAGGACACAGACTCGGAGCCGGACAGCGACGAC
TCGGATGAGACCTCCGAAGAGAGCGACGGCGAGGCGGAGCTGGATGGCGG
GGACCCCGCTGGCGGCGATAATGATGACGATATCAATGACGACGGCGGGG
GCGACGACGATGGCGCCAAGCGCCGCCACGCGGGTGATGGCGACGCCGAT
CAGCCGGAGGGCGGGGGGCAGAGACGGCGCAGGAAACGCGGGCGAAACAC
CCTCACGCCGGCGGAGCTCCATGCTATCGAGGAGGCGCGCAGGGTGCCGG
CGGAGCGGCGGCGGCGCCTGCGCGAGTACTACGCGAGCGACAGCTACGGG
CTCGGCGCGTCGCTCGTGCTGTACAACCTGGCCGAGAGGCGCGCCAAGGA
CACCAATGACCTGCTCTGGATGGCCATCGTGGGGCTCACGGACCAGTTCG
TGCACGCGCGCATACAGAAGGACATGTACCTGACGCACATGTGGGAGCTC
CACGGCAACGTGGTCATGAAGAACGCGGACGAGGACAGCGCCATGCAGCT
GGACGCCGACACGCGCGTGCCCGTGGGCGAGCGCGGCCGCATCGCCTTTG
AGATGGAGCTGCGCTTCATGCTGCACCGCCACTGGTCCCTGTACGAGGCC
ATGTACTACAGAGATAAGAGCTGCGGCCACCGCCACTGGAGCCTGTACGA
GGCCATGTACTACAGGCTGTACGAGGCCATGTACGACAGGGCCGTGTGCG
CGCGGGTGGCACGTCACTTCAACTCGTGCAGCAAGCTGCGCGTGTGGACG
ACGCCAGGGCGCCAGCGCATGGAGGAGCTGCTGGCCAAGATGGGCTTCAG
CCTGGAGCAGTGCCGGCAGAAGTTCCGATTCACGAGCGCGAATCTGCGGA
ATAAGCTGACGGACCAGATTGACAAGTACGGCGAGGAGTATGGCCTCACC
GACATCAAATATGGCTCCTTCCACCGCTACCTCGGCTTCAAGACGCCCTT
CTCCGCAGCGGACATTGTGTACTGCGCGACAACGCTCATCGAGCACCGCC
CGGACGATCCGCCGGGCGAAATCGCCGCCGACGTGTCCGAGGAAGTTCTG
GACGCGCGCGAGAGGGACGCGTTTCAGAGGAGCTTCAACGACGCGTACGA
CGCCCTCGGAGGGCACAACCCCAAGTCGCTGCAGCGCGGCCTCGACCTCA
GCATGTCGCTGCAACGAGCGGTGGTCCAGCAGGCCGTCTCGATGCTCGAG
AAGAACACGCTGCTGCGCACGACGCACTTCCGCTACGCGTACATCCGCGC
GACGGAGGCGCACTGCAACGTCATCGCGCAGCCGTGCGCGCTCGCGCGCC
TGGCGCTGCTGCTGATGGACGTGAACCGCGAGAGCAAGCACTGGACGGGC
GCGAACCGCCGCCCGCTCATCCTCCTCGCGGAGCGGCGCACGGCGTACCT
CGTGGTCGGCGTCGGCTGCCCCACGAGCGTCGACGACGCGCTCGGCTGCC
GCTTCGGCGCCGCGTTCGAGCTCGCGGCGGCGCGCATGGCGGCGCGCGTG
CGCCTCGACGGCTTCGACCGCAACGTCGTGGAGGTCCCGCGCGCGCACGC
GGGGCGCTTCGTAGAGGTCGTCTACGAGACCATGGACGCGTGA
back to top