Trimin1|350548|estExt_Genemark1.C_Ctg_660029 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350548
Unique NameTrimin1|350548|estExt_Genemark1.C_Ctg_660029
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length268
Homology
BLAST of jgi.p|Trimin1|350548 vs. uniprot
Match: A0A835YWB9_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWB9_9STRA)

HSP 1 Score: 490 bits (1261), Expect = 2.380e-174
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
Query:    1 MAEGVRRXXXXXXXXXXXXXXVNGFKHEQEAALLDEFSSGSEDDGPATLPQNHHLESGLRQAWSSSAKEWAAVVFSPRNVVTLVYALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPLLAALREDPVRCLVLAAVCMALAALLV 268
            MAEGVRRXXXXXXXXXXXXXXVNGFKHEQEAALLDEFSSGSEDDGPATLPQNHHLESGLRQAWSSSAKEWAAVVFSPRNVVTLVYALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPLLAALREDPVRCLVLAAVCMALAALLV
Sbjct:    1 MAEGVRRXXXXXXXXXXXXXXVNGFKHEQEAALLDEFSSGSEDDGPATLPQNHHLESGLRQAWSSSAKEWAAVVFSPRNVVTLVYALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPLLAALREDPVRCLVLAAVCMALAALLV 268          
BLAST of jgi.p|Trimin1|350548 vs. uniprot
Match: D8LIG9_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIG9_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 6.650e-57
Identity = 105/180 (58.33%), Postives = 134/180 (74.44%), Query Frame = 0
Query:   65 SSAKEWAAVVFSPRNVVTLVYALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPLLA 244
            S  ++W  V+ + RN+ T VYA+SYT ++PVLPFMA R +Y    +  G  G      S GV EAWRG+ YG VMSGYY TKMI+AP IGFLSDR+GR+  LVVT LG  ++F +T L G++S+HGL++CRLL+GCFAANGALM AYIRD+VP E Q+SAF+QHSA+WG AY+ A  L+A
Sbjct:  119 SRKRDWFKVLLAARNLATCVYAVSYTTTMPVLPFMANRLIYPRGPDGAGDPG------SEGVREAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIA 292          
BLAST of jgi.p|Trimin1|350548 vs. uniprot
Match: A0A1H6EWG4_9ACTN (MFS transporter, DHA1 family, tetracycline resistance protein n=1 Tax=Nonomuraea solani TaxID=1144553 RepID=A0A1H6EWG4_9ACTN)

HSP 1 Score: 81.3 bits (199), Expect = 6.280e-14
Identity = 57/164 (34.76%), Postives = 83/164 (50.61%), Query Frame = 0
Query:   79 NVVTLVYALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPL 242
            +    V  L +TL +P LPF A                      S G    W    +G +MS Y   +++AAP++G LSDR GR+ L+++   GS V+ T T L    SL GL++CR+L G    + ++  AY+ D+VP E +  A AQ  AA G+A+VV   L
Sbjct:   10 SATVFVDLLGFTLILPALPFYA---------------------SSLGATGLW----FGALMSAYSVAQLVAAPVLGRLSDRYGRRPLVLLALAGSVVSMTFTGL--ATSLAGLLVCRMLAGACGGSISVAQAYLADAVPAERRTGAMAQLGAAIGLAFVVGPAL 146          
BLAST of jgi.p|Trimin1|350548 vs. uniprot
Match: UPI00110C4F11 (MFS transporter n=1 Tax=Nonomuraea basaltis TaxID=2495887 RepID=UPI00110C4F11)

HSP 1 Score: 80.9 bits (198), Expect = 8.100e-14
Identity = 58/164 (35.37%), Postives = 83/164 (50.61%), Query Frame = 0
Query:   79 NVVTLVYALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPL 242
            +    V  L +TL +P LPF        Y  EF             G    W    +G +MS Y   +++AAP++G LSDR GR+ L+++   GS ++ TLT L    SL GL+ CR L G    + ++  AY+ D+VP E +  A AQ  AA GMA+V+   L
Sbjct:   10 SATVFVDLLGFTLILPALPF--------YAAEF-------------GATGLW----FGALMSAYSVAQLVAAPVLGRLSDRYGRRPLVLLALAGSVLSMTLTGL--TTSLAGLLACRALAGACGGSISVAQAYLADAVPAERRTGAMAQMGAAIGMAFVIGPAL 146          
BLAST of jgi.p|Trimin1|350548 vs. uniprot
Match: UPI001568539D (MFS transporter n=1 Tax=Nonomuraea antri TaxID=2730852 RepID=UPI001568539D)

HSP 1 Score: 75.9 bits (185), Expect = 4.260e-12
Identity = 57/162 (35.19%), Postives = 82/162 (50.62%), Query Frame = 0
Query:   81 VTLVYALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPL 242
            V  V  L +TL +P LPF A                        G   AW    +G +MS Y   +++AAP++G LSDR GR+ L+++T  GS V+  LT L    SL  L++ RLL G    + ++  AY+ D+VP E +  A AQ  AA G+A+V+   L
Sbjct:   12 VVFVDLLGFTLILPTLPFYAA---------------------GLGATGAW----FGALMSAYSVAQLLAAPVLGRLSDRYGRRPLVLLTLAGSAVSLALTGL--ADSLVLLLVTRLLAGACGGSISVAQAYLADAVPAERRTGAMAQMGAAIGLAFVLGPAL 146          
BLAST of jgi.p|Trimin1|350548 vs. uniprot
Match: UPI00166125B2 (MFS transporter n=1 Tax=Nonomuraea sp. SYSU D8015 TaxID=2593644 RepID=UPI00166125B2)

HSP 1 Score: 75.5 bits (184), Expect = 5.990e-12
Identity = 60/172 (34.88%), Postives = 84/172 (48.84%), Query Frame = 0
Query:   71 AAVVFSPRNVVTLVYALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPL 242
            A VV S    V L   L +TL +P LPF A                        G    W    +G +MS Y   ++ AAP++G LSDR GR+ L+++   GS V+  LT L    SL  L++CRLL G    + ++  AY+ D+VP E +  A A+  AA GMA+V+   L
Sbjct:    5 AQVVVSATVFVDL---LGFTLILPALPFYAA---------------------GLGATGLW----FGALMSAYSVAQLAAAPVLGRLSDRYGRRPLVLLALAGSAVSMALTGL--AASLAWLLVCRLLAGACGGSISVAQAYLADAVPEERRTGAMARMGAAIGMAFVIGPAL 146          
BLAST of jgi.p|Trimin1|350548 vs. uniprot
Match: A0A1G8A8K1_9ACTN (Major Facilitator Superfamily protein n=1 Tax=Nonomuraea jiangxiensis TaxID=633440 RepID=A0A1G8A8K1_9ACTN)

HSP 1 Score: 73.9 bits (180), Expect = 2.530e-11
Identity = 61/172 (35.47%), Postives = 83/172 (48.26%), Query Frame = 0
Query:   71 AAVVFSPRNVVTLVYALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPL 242
            A VV S    V L   L +T+ +P LPF A R         +G DG                  +G VMS Y   +   APL+G LSDR GR+ L+++   GS V+  LT   G  +   L+ CRLL G    + ++  AY+ D+VP E +  A AQ  AA G+A+VV   L
Sbjct:    5 AQVVISATVFVDL---LGFTVILPGLPFFAAR---------LGADGAA----------------FGLVMSAYSIAQFACAPLLGRLSDRYGRRPLVLLALAGSAVSLALTGAAGSPA--WLLACRLLAGACGGSISVAHAYVADTVPAERRTGAMAQLGAAIGVAFVVGPAL 146          
BLAST of jgi.p|Trimin1|350548 vs. uniprot
Match: A0A366LM25_9ACTN (MFS transporter n=1 Tax=Spongiactinospora rosea TaxID=2248750 RepID=A0A366LM25_9ACTN)

HSP 1 Score: 73.6 bits (179), Expect = 2.810e-11
Identity = 41/107 (38.32%), Postives = 67/107 (62.62%), Query Frame = 0
Query:  132 GIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVV 238
            G+ +G ++S Y   + +AAP++G LSDR GR+ +L++   GS V+  LT + G  SL  L+ CR+L G    + ++  AY+ D+VP + +  A AQ  AA GMA+++
Sbjct:   38 GVWFGALVSAYAVAQFVAAPVLGRLSDRYGRRSVLLMALAGSAVSMALTGMAG--SLGALLACRVLAGASGGSISVAQAYLADAVPADRRTQAMAQMGAAIGMAFMI 142          
BLAST of jgi.p|Trimin1|350548 vs. uniprot
Match: UPI0018A85CA5 (MFS transporter n=1 Tax=Nonomuraea cypriaca TaxID=1187855 RepID=UPI0018A85CA5)

HSP 1 Score: 70.9 bits (172), Expect = 7.620e-11
Identity = 53/164 (32.32%), Postives = 78/164 (47.56%), Query Frame = 0
Query:   79 NVVTLVYALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPL 242
            +    V  L +TL +P LPF A                        G    W     G +MS Y   +++AAP +G LSDR GR+ L+++   GS ++  LT L    SL  L+ CR+L G    + ++  AY+ D+VP E +  A AQ  AA G+A+V+   L
Sbjct:   11 SATVFVDLLGFTLVLPALPFYAA---------------------DLGATGLWL----GALMSAYSVAQLVAAPALGRLSDRYGRRPLVLLALAGSVLSMALTGL--ATSLGWLLACRMLAGACGGSISVAHAYLADAVPAERRTGAMAQMGAAIGLAFVIGPAL 147          
BLAST of jgi.p|Trimin1|350548 vs. uniprot
Match: A0A1H2PPR8_9BURK (MFS transporter, DHA1 family, tetracycline resistance protein n=1 Tax=Chitinasiproducens palmae TaxID=1770053 RepID=A0A1H2PPR8_9BURK)

HSP 1 Score: 72.4 bits (176), Expect = 7.950e-11
Identity = 61/178 (34.27%), Postives = 89/178 (50.00%), Query Frame = 0
Query:   86 ALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPLLAALREDPVRCLVLAAVCMAL 263
            A+   L++P+LP + R+         VG DG      +PG    WR   YG  ++ Y   + + +P +G LSDR GR+ +L+++ LG C ++ L  L    +L  L+L R L G   A GA+  AY+ D  P   +A  F Q  A  G+ Y+    L  AL E  VR   LAA  +AL
Sbjct:   16 AMGVALTLPILPALLRQ---------VGHDG------APG----WR---YGGFLALYALMQFLLSPTLGALSDRHGRRPVLLLSLLGQCASYLLLALAPNFTL--LMLGRALAGATGATGAVAAAYLADVTPPAGRARRFGQLGACVGLGYIAGPALGGALGEHGVRLPFLAAAALAL 169          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350548 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWB9_9STRA2.380e-174100.00Major facilitator superfamily domain-containing pr... [more]
D8LIG9_ECTSI6.650e-5758.33Major facilitator transporter n=2 Tax=Ectocarpus T... [more]
A0A1H6EWG4_9ACTN6.280e-1434.76MFS transporter, DHA1 family, tetracycline resista... [more]
UPI00110C4F118.100e-1435.37MFS transporter n=1 Tax=Nonomuraea basaltis TaxID=... [more]
UPI001568539D4.260e-1235.19MFS transporter n=1 Tax=Nonomuraea antri TaxID=273... [more]
UPI00166125B25.990e-1234.88MFS transporter n=1 Tax=Nonomuraea sp. SYSU D8015 ... [more]
A0A1G8A8K1_9ACTN2.530e-1135.47Major Facilitator Superfamily protein n=1 Tax=Nono... [more]
A0A366LM25_9ACTN2.810e-1138.32MFS transporter n=1 Tax=Spongiactinospora rosea Ta... [more]
UPI0018A85CA57.620e-1132.32MFS transporter n=1 Tax=Nonomuraea cypriaca TaxID=... [more]
A0A1H2PPR8_9BURK7.950e-1134.27MFS transporter, DHA1 family, tetracycline resista... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
NoneNo IPR availablePANTHERPTHR23504MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10coord: 81..264
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 78..268
e-value: 1.3E-23
score: 85.3
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 81..267
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 81..246
e-value: 5.7E-20
score: 71.5
IPR005829Sugar transporter, conserved sitePROSITEPS00216SUGAR_TRANSPORT_1coord: 153..169
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 74..268
score: 9.335753

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_66contigContig_66:197888..199503 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350548mRNA_9656Tribonema minus UTEX_B_3156 mRNAContig_66 197887..199503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350548|estExt_Genemark1.C_Ctg_660029 ID=Trimin1|350548|estExt_Genemark1.C_Ctg_660029|Name=jgi.p|Trimin1|350548|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=268bp
MAEGVRRRRKEQQEQQQQQQQVNGFKHEQEAALLDEFSSGSEDDGPATLP
QNHHLESGLRQAWSSSAKEWAAVVFSPRNVVTLVYALSYTLSIPVLPFMA
RRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAA
PLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGC
FAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPLLAALREDP
VRCLVLAAVCMALAALLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR011701MFS
IPR005829Sugar_transporter_CS
IPR020846MFS_dom