Trimin1|352225|estExt_Genemark1.C_Ctg_1120052 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352225
Unique NameTrimin1|352225|estExt_Genemark1.C_Ctg_1120052
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length358
Homology
BLAST of jgi.p|Trimin1|352225 vs. uniprot
Match: A0A835ZEY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEY4_9STRA)

HSP 1 Score: 726 bits (1874), Expect = 8.940e-265
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0
Query:    1 MIHIIGFVQRKAAPATRSLPAAAVMMQQRCFQPRARLVAYGLDYGKSDVQPAIPPPAVETVKGESPPAEARRDKWAHALAAPEKGCLLLARDGMFGESQKYFKNAVILVIEHGATGSVGLILNQPTVRSMGEVTGGDSGLAHLPGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENGRLGARHNAVGVWGWLSVLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 357
            MIHIIGFVQRKAAPATRSLPAAAVMMQQRCFQPRARLVAYGLDYGKSDVQPAIPPPAVETVKGESPPAEARRDKWAHALAAPEKGCLLLARDGMFGESQKYFKNAVILVIEHGATGSVGLILNQPTVRSMGEVTGGDSGLAHLPGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENGRLGARHNAVGVWGWLSVLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR
Sbjct:    1 MIHIIGFVQRKAAPATRSLPAAAVMMQQRCFQPRARLVAYGLDYGKSDVQPAIPPPAVETVKGESPPAEARRDKWAHALAAPEKGCLLLARDGMFGESQKYFKNAVILVIEHGATGSVGLILNQPTVRSMGEVTGGDSGLAHLPGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENGRLGARHNAVGVWGWLSVLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 357          
BLAST of jgi.p|Trimin1|352225 vs. uniprot
Match: A0A836CDX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDX0_9STRA)

HSP 1 Score: 376 bits (965), Expect = 8.590e-129
Identity = 192/216 (88.89%), Postives = 192/216 (88.89%), Query Frame = 0
Query:  142 HLPGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENGRLGARHNAVGVWGWLSVLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 357
            HL GLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAEN                  LCA    GP QLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR
Sbjct:    7 HL-GLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENS-----------------LCASAV-GPRQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 203          
BLAST of jgi.p|Trimin1|352225 vs. uniprot
Match: A0A836CG07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG07_9STRA)

HSP 1 Score: 344 bits (882), Expect = 2.950e-116
Identity = 172/198 (86.87%), Postives = 176/198 (88.89%), Query Frame = 0
Query:  168 VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENGRLGARHNAVGVW--------GWLSVLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 357
            VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAE  + G   +    +          +  LCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR
Sbjct:    3 VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAE--KWGGADDLDSSYFNSYLNGNSGVPFLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 198          
BLAST of jgi.p|Trimin1|352225 vs. uniprot
Match: A0A835YX41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX41_9STRA)

HSP 1 Score: 253 bits (645), Expect = 8.480e-80
Identity = 124/197 (62.94%), Postives = 144/197 (73.10%), Query Frame = 0
Query:   74 KWAHALAAPEKGCLLLARDGMFGESQKYFKNAVILVIEHGATGSVGLILNQPTVRSMGEVTGGDSGLAHLPGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLA 270
            +WAHALAAPEKGCLL+A +GMF   Q YF+ AV+L+IEHGA G+ GLILNQPT  +M EVT G    A + G E N LYFGGDV     DG D VN MHGR+D EG E++KGVKLGGL +ALA VA+G A P EFKFF R+CGW PGQL  EVK G WY AACDV T+LD Y  + QP  LW++VL RMGGKY  +A
Sbjct:   36 RWAHALAAPEKGCLLIANEGMFDVGQIYFRRAVVLIIEHGARGTAGLILNQPTTSTMVEVTEGQD--AQIAGFEDNTLYFGGDVVSGTGDGTDAVNLMHGREDVEGTEILKGVKLGGLEEALARVAEGTAQPQEFKFFCRYCGWAPGQLQEEVKAGIWYLAACDVPTILDNYI-QGQPDGLWSDVLRRMGGKYADVA 229          
BLAST of jgi.p|Trimin1|352225 vs. uniprot
Match: A0A6H5JA69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA69_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 2.060e-70
Identity = 129/241 (53.53%), Postives = 159/241 (65.98%), Query Frame = 0
Query:   23 AVMMQQRCFQPRARLVAYGLD-YGKSDVQPAIPPPAVETVKGESPPAEARRDKWAHALAAPEKGCLLLARDGMFGESQKYFKNAVILVIEHGATGSVGLILNQPTVRSMGEVTGGDSGLAHLPGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARM 262
            A  M+ R F  RARL++ GLD +G    Q  +   AV T  G    A A R  WAH L  PE GCL++A+ GMF   Q+YF  AV LVI+HG  G+V LILN+PT  +MG+V  GD  L  +PG+E N LY GGDV   RDDGLDVVN MHGR+D  G+EV+KG++LGGL +ALALVAQG+A P EFKFF R+ GWGPGQL  EV  GAW  AACD+ +VL+      QP   W E++ R+
Sbjct:  113 AESMELRDF--RARLMSKGLDGWGGGGEQARV---AVVTAAGGG--ARALRGGWAHPLVRPELGCLVIAKQGMFVTQQQYFYKAVALVIQHGDDGTVALILNRPTTFTMGDVCKGD--LQSVPGMEDNVLYMGGDVTGARDDGLDVVNLMHGREDVPGMEVVKGLRLGGLKEALALVAQGRAQPEEFKFFSRYSGWGPGQLEAEVLAGAWELAACDLESVLESQNHPDQPGHFWGEIMGRL 344          
BLAST of jgi.p|Trimin1|352225 vs. uniprot
Match: A0A1Y5IDK1_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IDK1_OSTTA)

HSP 1 Score: 170 bits (431), Expect = 1.170e-46
Identity = 109/240 (45.42%), Postives = 140/240 (58.33%), Query Frame = 0
Query:   34 RARLVAYGLDYGKSDVQPAIPPPAVETVKGESPPAEARRDKWAHALAAPEKGCLLLARDGMFGESQKYFKNAVILVIEHGATGSVGLILNQPTVRSMGEVTGGDSGLAHLPGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEG-IEVIKGVKLGGLPDALALVAQ--GKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLA 270
            RARL+A   +    +   AI    ++ ++ ++P   A+   WAH +AAPEKGCLL+A D  F  SQ+YF  AVILV+EH   GS+G+ILN+PT  +MG V+G  SG    P  E N LYFGGDVG    DG   V+F+HGR+D +G +EV+ GV LGG   A  LV Q      P EFKFF R+CGW PGQL  E + G WY  A      L Q     +P  LW E+L   GG+   +A
Sbjct:   73 RARLLAREREATPEERASAISEENMKVLEAQNPRL-AQAKPWAHVIAAPEKGCLLVAADQEFRMSQQYFHQAVILVLEHHENGSMGIILNRPTQYNMGYVSGEPSG----PFAE-NALYFGGDVG----DG--TVSFLHGREDVKGSVEVLPGVYLGGYESACELVQQDGSTCHPDEFKFFARYCGWAPGQLESECERGVWYPIAAAKELSLKQVIQLPKP--LWREILELCGGELADIA 298          
BLAST of jgi.p|Trimin1|352225 vs. uniprot
Match: A0A7S0PMA6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PMA6_9CHLO)

HSP 1 Score: 163 bits (413), Expect = 4.890e-44
Identity = 92/184 (50.00%), Postives = 114/184 (61.96%), Query Frame = 0
Query:   75 WAHALAAPEKGCLLLARDGMFGESQKYFKNAVILVIEHGATGSVGLILNQPTVRSMGEVTGGDSGLAHLPGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEG-IEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTE 257
            WAH +AAPEKGCLL+A D  F  SQ+YF  AVILV+EH   GS+G+ILN+PT   MG V+G   G+       +N LYFGGDVG    DG   V+F+HGR+D +G +EV+ G+ LGG   A ALV +  A P EFKFF R+CGW PGQL  E + G W+  A      L Q     +P  LW E
Sbjct:  147 WAHVIAAPEKGCLLVAADHEFRMSQQYFHQAVILVLEHHENGSMGVILNRPTQYDMGYVSGDVDGV-----FAKNALYFGGDVG----DG--TVSFLHGREDVKGSVEVLPGMYLGGYDSACALVEEQGAKPDEFKFFARYCGWAPGQLESECERGVWFPVAGAKELALKQVIQLPKP--LWRE 317          
BLAST of jgi.p|Trimin1|352225 vs. uniprot
Match: K8EAP8_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EAP8_9CHLO)

HSP 1 Score: 157 bits (398), Expect = 2.030e-41
Identity = 91/200 (45.50%), Postives = 113/200 (56.50%), Query Frame = 0
Query:   67 PAEARRDKWAHALAAPEKGCLLLARDGMFGESQKYFKNAVILVIEHGATGSVGLILNQPTVRSMGEVTGGDSGLAHLPGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDD-CEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGK 265
            P  A+   WAH +A PEKG L++A    F  SQ+YF   VIL++EH   GS+G+ILN+PT+  M +V   ++G         N LYFGGDVG    DG   V+F+HG  D  +  EV  GV +GG  DA  LV +GK DP EFKFF R+CGW PGQL  E   G WY  AC     L      + P  LW EVL   GG+
Sbjct:  156 PGLAKDKAWAHVIAKPEKGSLIVAATDDFVTSQQYFNQCVILLLEHSKDGSMGVILNRPTMYKMADVVNDENGP-----FSENALYFGGDVG----DG--TVSFLHGSPDVADAEEVSPGVFIGGFNDAGRLVKEGKKDPREFKFFARYCGWAPGQLEDECARGVWYPVACSRQIALKPVI--ALPKPLWREVLELCGGE 342          
BLAST of jgi.p|Trimin1|352225 vs. uniprot
Match: A0A7S0S201_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S201_9CHLO)

HSP 1 Score: 150 bits (378), Expect = 1.040e-38
Identity = 93/203 (45.81%), Postives = 120/203 (59.11%), Query Frame = 0
Query:   75 WAHALAAPEKGCLLLARDGMFGESQKYFKNAVILVIEH-GATGSVGLILNQPTVRSMGEVTGGDSGLAH-LPGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCE-GIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENGR 274
            WAH++  PEKG LLLA   MF  SQ+YF  AVIL+++H  + GS G+ILN+P++ ++G++      L H LP      L+ GGDVG     G DV   +H R D     EV+KGV LGG+  A  LVA GKADP EFK++V++ GWGPGQL  E K G W+ AA     +L +    S     W EVL  MGG Y  L+ N R
Sbjct:  127 WAHSIPKPEKGSLLLAHPMMFTNSQEYFFQAVILLLDHDNSKGSWGIILNRPSMYTLGKLE-----LTHPLPEFASCPLHVGGDVG-----GGDVA-VLHARTDLPLSKEVVKGVHLGGVDAARELVAAGKADPLEFKWYVKYAGWGPGQLESECKAGVWFTAAASARVILGE-ARASDGCDRWHEVLGLMGGDYAELSMNVR 317          
BLAST of jgi.p|Trimin1|352225 vs. uniprot
Match: A0A2J7ZXQ0_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZXQ0_9CHLO)

HSP 1 Score: 145 bits (366), Expect = 2.640e-37
Identity = 89/223 (39.91%), Postives = 126/223 (56.50%), Query Frame = 0
Query:   62 KGESPPAEARRDKWAHALAAPEKGCLLLARDGMFGESQKYFKNAVILVIEHGATGSVGLILNQPTVRSMGEVTGGDSGLAHLPGLERN--RLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIE-VIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENGRLGARHNA 281
            KG+     +   +WAHA++ PEKG +LLA   MF +SQ YF  AVIL++EHG +GS GLILN+P+   +G+V        + P  +    RLY GGDVG  +      V  MH   + EG+E V+KGV LGG+  A   V  G+A+  +F++F  + GW  GQLA E K G W+ AA     VL +   E + A  W ++L  MGG Y+ L++  +    H+A
Sbjct:   86 KGQGQAGPSTSGEWAHAISKPEKGAVLLAHPLMFRQSQPYFHRAVILLLEHGDSGSYGLILNRPSKLRIGDVP------LNRPQTQFADCRLYVGGDVGSGQ------VQVMHPHGELEGVEEVMKGVYLGGMDSARDAVEAGRAEAKDFRWFSAYAGWAAGQLAAECKRGVWFTAAASPKVVLQEVALE-EGADYWHKLLELMGGDYQGLSQAVKKHDSHDA 295          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352225 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEY4_9STRA8.940e-265100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDX0_9STRA8.590e-12988.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CG07_9STRA2.950e-11686.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YX41_9STRA8.480e-8062.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JA69_9PHAE2.060e-7053.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y5IDK1_OSTTA1.170e-4645.42Uncharacterized protein n=2 Tax=Ostreococcus tauri... [more]
A0A7S0PMA6_9CHLO4.890e-4450.00Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
K8EAP8_9CHLO2.030e-4145.50Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
A0A7S0S201_9CHLO1.040e-3845.81Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A2J7ZXQ0_9CHLO2.640e-3739.91Uncharacterized protein n=1 Tax=Tetrabaena sociali... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1740.10coord: 288..356
e-value: 1.2E-8
score: 36.5
coord: 82..281
e-value: 1.1E-39
score: 137.7
NoneNo IPR availablePANTHERPTHR31984TRANSPORTER, PUTATIVE (DUF179)-RELATEDcoord: 60..271
coord: 296..351
NoneNo IPR availableSUPERFAMILY143456VC0467-likecoord: 296..353
NoneNo IPR availableSUPERFAMILY143456VC0467-likecoord: 73..270
IPR003774Protein of unknown function UPF0301PFAMPF02622DUF179coord: 99..263
e-value: 1.0E-25
score: 90.6
coord: 291..343
e-value: 9.7E-5
score: 22.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_112contigContig_112:496818..508787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352225mRNA_15540Tribonema minus UTEX_B_3156 mRNAContig_112 496818..508787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352225|estExt_Genemark1.C_Ctg_1120052 ID=Trimin1|352225|estExt_Genemark1.C_Ctg_1120052|Name=jgi.p|Trimin1|352225|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=358bp
MIHIIGFVQRKAAPATRSLPAAAVMMQQRCFQPRARLVAYGLDYGKSDVQ
PAIPPPAVETVKGESPPAEARRDKWAHALAAPEKGCLLLARDGMFGESQK
YFKNAVILVIEHGATGSVGLILNQPTVRSMGEVTGGDSGLAHLPGLERNR
LYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQ
GKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQ
PAALWTEVLARMGGKYKTLAENGRLGARHNAVGVWGWLSVLCALLRWGPG
QLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALA
EMWGGHR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003774UPF0301