mRNA_9663 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|169722
Unique NamemRNA_9663
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|169722 vs. uniprot
Match: A0A836C990_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C990_9STRA)

HSP 1 Score: 519 bits (1337), Expect = 1.390e-185
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1 
Query:    1 MLSAAAPEHARDAWTRCALLRRERISRTAHRFTFAPADPRFAAQCLPGQHLQLSISDAATGAHGAARSFTPVSIAPDGTFDVVFRVYSYSSXXXXXXSSGDVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQISGRAQRATNIGFVAAGTGITPVYAALQAALGNPADATRFTLVYASRSRGEALLSAELEDAAERAGGRLRVVHVLSRDQDAAMTTTVYGRLDEAKLSAYLPAPSVETLLMVCGPPAMVHGLVLPALKSLQHDDEQVFVF 834
            MLSAAAPEHARDAWTRCALLRRERISRTAHRFTFAPADPRFAAQCLPGQHLQLSISDAATGAHGAARSFTPVSIAPDGTFDVVFRVYSYSSXXXXXXSSGDVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQISGRAQRATNIGFVAAGTGITPVYAALQAALGNPADATRFTLVYASRSRGEALLSAELEDAAERAGGRLRVVHVLSRDQDAAMTTTVYGRLDEAKLSAYLPAPSVETLLMVCGPPAMVHGLVLPALKSLQHDDEQVFVF
Sbjct:    1 MLSAAAPEHARDAWTRCALLRRERISRTAHRFTFAPADPRFAAQCLPGQHLQLSISDAATGAHGAARSFTPVSIAPDGTFDVVFRVYSYSSXXXXXXSSGDVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQISGRAQRATNIGFVAAGTGITPVYAALQAALGNPADATRFTLVYASRSRGEALLSAELEDAAERAGGRLRVVHVLSRDQDAAMTTTVYGRLDEAKLSAYLPAPSVETLLMVCGPPAMVHGLVLPALKSLQHDDEQVFVF 278
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BLAST of jgi.p|Trimin1|169722 vs. uniprot
Match: A0A484MCA7_9ASTE (Nitrate reductase (NADH) n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484MCA7_9ASTE)

HSP 1 Score: 119 bits (299), Expect = 9.960e-27
Identity = 87/262 (33.21%), Postives = 136/262 (51.91%), Query Frame = 1 
Query:   49 CALLRRERISRTAHRFTFA-PADPRFAAQCLP-GQHLQL-SISDAATGAHGAARSFTPVSIAPD--GTFDVVFRVYSYSSXXXXXXSSGDVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQISGRAQRATNIGFVAAGTGITPVYAALQAALGNPADATRFTLVYASRSRGEALLSAELEDAAERAGGRLRVVHVLSRDQDAAMTTTVYGRLDEAKLSAYLPAPSVETLLMVCGPPAMVHGLVLPALKSLQHDDE 819
            C L+ +E ISR    F FA P D +     LP G+H+ L +I D         R++TP+S APD  G FD+V R+Y               P+    ++ LE L +G  ++   P G + Y   G + + G+ +  T +  +A GTGITP+Y A+QA L +P D T   +VYA+R+  +  L  EL+  AE+  GR++V +V+   ++    +T  G ++   L  ++P  S  TL + CGPP M+   V P L+ + +D E
Sbjct:  679 CKLVHKESISRDVRLFRFALPRDDQVLG--LPVGKHIFLFAIVDGKL----CMRAYTPIS-APDQVGYFDLVVRIYFKEIHPRF-------PNGGQMSQHLELLQLGSCLQVKGPVGHIEYKGRGNFLVHGKPKFGTKLSMIAGGTGITPIYQAMQAILRDPGDETEMHVVYANRTEADIALRGELDAWAEKYPGRVKVWYVVQESREGWKYST--GYINAEILRGHIPGASATTLALACGPPPMIQFAVCPNLEKMGYDIE 924
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BLAST of jgi.p|Trimin1|169722 vs. uniprot
Match: F6ZGS5_CIOIN (NADH-cytochrome b5 reductase n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6ZGS5_CIOIN)

HSP 1 Score: 115 bits (287), Expect = 1.360e-26
Identity = 78/267 (29.21%), Postives = 131/267 (49.06%), Query Frame = 1 
Query:   55 LLRRERISRTAHRFTFAPADPRFAAQCLPGQHLQLSISDAATGAHGAARSFTPVSIAPD-GTFDVVFRVYSYSSXXXXXXSSGDVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQIS------GRAQRATNIGFVAAGTGITPVYAALQAALGNPADATRFTLVYASRSRGEALLSAELEDAAERAGGRLRVVHVLSRDQDAAMTTTVYGRLDEAKLSAYLPAPSVETLLMVCGPPAMVHGLVLPALKSLQHDDEQVFVF 834
            L+ +ERI+    +F FA            G+H+ LS   A        R +TPV+   D G  D+V +VY   +           P     ++ LEALP+GG I+   P G + Y    ++ +         A+RA  +  +A GTGITP+   ++  L +P+D T+ +L+YA+++  + L+  ELE+ A+      ++ + L R       +T  G +DE  +   LPAP ++TL+++CGPP M+    LP L+ + H   ++  F
Sbjct:   54 LIAKERITHDTRKFVFALPSENHILGLTVGKHIFLS---ARVDGKLVVRPYTPVTSDDDKGHMDLVIKVYFKDTHPKF-------PEGGKMSQYLEALPIGGTIDVRGPNGLIEYRTKSVFSVRYEKNGFSYAKRAKEVAMIAGGTGITPMLQIIRQCLKDPSDHTKLSLLYANQTEDDILVRKELEECAKADPNHFKLWYTLDRPPADWKYST--GFIDEDMIRDNLPAPGIDTLVLLCGPPPMIKFACLPNLEKVGHQSGRICTF 308
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BLAST of jgi.p|Trimin1|169722 vs. uniprot
Match: UPI00064B6D69 (NADH-cytochrome b5 reductase 2 n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI00064B6D69)

HSP 1 Score: 110 bits (274), Expect = 1.570e-24
Identity = 84/271 (31.00%), Postives = 133/271 (49.08%), Query Frame = 1 
Query:   55 LLRRERISRTAHRFTFAPADPRFAAQCLPGQ--HLQLSISDAATGAHGAARSFTPVSIAPD-GTFDVVFRVYSYSSXXXXXXSSGDVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQISGRAQRAT--------NIGFVAAGTGITPVYAALQAALGNPADATRFTLVYASRSRGEALLSAELEDAAERAGGRLRVVHVLSRDQDAAMTTTVYGRLDEAKLSAYLPAPSVETLLMVCGPPAMVHGLVLPALKSLQHDDEQVFVF 834
            L+ +E I+    RF F    P        G   HL  SI+D     +   R +TPVS   D G  D++ +VY           +G  P     ++ L+ + +G  I    P GRL Y A G   IS R Q A         N+G +A GTGITP+   ++  + NPAD T+ +L++A+++  + L+  ELE+ A+    + ++ + + R       +  Y   D  K+  +LP P   TL+++CGPP M+ G VLP+L  L + +E +FV+
Sbjct:   81 LIEKEEITHNTRRFRFKLPTPDHVLGLPVGHYVHLIASIND-----NIVTRPYTPVSSDDDQGFVDLIVKVYH---------KNGSHPEGGKMSQYLDNMKIGDCILFRGPTGRLVYNAPG--DISIRTQNACDPETRVFDNLGMIAGGTGITPMLQLIRHIIKNPADKTKISLLFANQTEEDILVRTELEEIAKTHEDQFKLWYTVDRPPADWEYSVGYVTADMIKM--HLPLPGKSTLILLCGPPIMIQGTVLPSLMKLGYTEEMIFVY 333
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BLAST of jgi.p|Trimin1|169722 vs. uniprot
Match: UPI0019D68813 (nitrate reductase [NADH]-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D68813)

HSP 1 Score: 112 bits (280), Expect = 3.230e-24
Identity = 87/266 (32.71%), Postives = 130/266 (48.87%), Query Frame = 1 
Query:   49 CALLRRERISRTAHRFTFAPADPRFAAQCLPGQHLQLSISDAATGAHGAARSFTPVSIAPD-GTFDVVFRVYSYSSXXXXXXSSGDVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQISGRAQRATNIGFVAAGTGITPVYAALQAAL-GNPADATRFTLVYASRSRGEALLSAELEDAAERAGGRLRVVHVLS--RDQDAAMTTTVYGRLDEAKLSAYLPAPSVETLLMVCGPPAMVHGLVLPALKSLQHDDEQVFVF 834
            C L+ R+ +SR      FA   P  A     G+HL +    A       AR++TP S A + G FD++ +VY             + P     ++ L++L VG ++    P GR+ Y+  G + + G  +RA  +  VA G+GITP+Y  +QAAL G P D T   LVYA+R+  + LL  EL+  A    GR +V +V+S  R  +     +V G + E  L  +LP      L + CGPP M+   V P L+ + +    V VF
Sbjct:  654 CRLVGRKELSRDVRLLRFALPAPDQALGLPVGKHLLVC---ADIDGKLCARAYTPTSSADEAGHFDLLVKVYFRDQHP-------EFPRGGRMSQHLDSLTVGSYVGVKGPLGRVEYLGRGGFVVGGELRRARRLAMVAGGSGITPMYQVIQAALRGQPEDETVMHLVYANRTEDDILLRGELDRWAAEFPGRFKVWYVVSQVRRPEEGWEYSV-GIVTEDILREHLPEGGDGALALACGPPLMIQLAVSPNLEKMGYTSSSVVVF 908
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BLAST of jgi.p|Trimin1|169722 vs. uniprot
Match: A0A7S4PS67_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas paramecium TaxID=2898 RepID=A0A7S4PS67_9CRYP)

HSP 1 Score: 109 bits (272), Expect = 1.810e-23
Identity = 78/262 (29.77%), Postives = 130/262 (49.62%), Query Frame = 1 
Query:   55 LLRRERISRTAHRFTFAPADPRFAAQCLPGQHLQLSISDAATGAHGAARSFTPVSIAPD--GTFDVVFRVYSYSSXXXXXXSSGDVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQISGRAQRATNIGFVAAGTGITPVYAALQAALGNPADATRFTLVYASRSRGEALLSAELEDAAERAGGRLRVVHVLSRDQDAAMTTTVYGRLDEAKLSAYLPAPSVETLLMVCGPPAMVHGLVLPALKSLQHDDEQVFVF 834
            L +R+R+S    RF +A   P        G H+ L+ + A    +   R++TP S A D  G FD+V +VY   +           P     ++ LE++ VG  I+   P    +Y   G +++ G  +RA+ +GF+  GTG+TP +  +QA L +  D T   LVYA+++  + LL   L+  A     R RV + +S+  D    T   G ++   ++ ++P    ET + +CGPP M+ G  +P+LK+  H D++   F
Sbjct:  242 LAQRDRLSHDTWRFRYALPQPTQRLGLPLGGHIMLTATIAGEVVN---RAYTPTS-AHDAVGHFDLVIKVYRAGTNPRF-------PAGGKMSQHLESMAVGDTIQVRGPLFHFQYTGRGEFEVHGERRRASALGFLCGGTGLTPAFQVIQAILADKMDTTVCWLVYANQTPDDILLRDVLDRWAVEHPARFRVHYTVSKLPDGMPWTHSLGYINTDMVAQHIPPAGEETFVGMCGPPPMIDGACVPSLKACGHADDRYMSF 492
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BLAST of jgi.p|Trimin1|169722 vs. uniprot
Match: A0A6J8E2Z9_MYTCO (NADH-cytochrome b5 reductase n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8E2Z9_MYTCO)

HSP 1 Score: 106 bits (265), Expect = 1.920e-23
Identity = 77/267 (28.84%), Postives = 126/267 (47.19%), Query Frame = 1 
Query:   55 LLRRERISRTAHRFTFAPADPRFAAQCLPGQHLQLSISDAATGAHGAARSFTPVSIAPD-GTFDVVFRVYSYSSXXXXXXSSGDVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQISGRAQRATN------IGFVAAGTGITPVYAALQAALGNPADATRFTLVYASRSRGEALLSAELEDAAERAGGRLRVVHVLSRDQDAAMTTTVYGRLDEAKLSAYLPAPSVETLLMVCGPPAMVHGLVLPALKSLQHDDEQVFVF 834
            L+ RE +S    RF FA   P        GQH+ L++           R +TPVS   D G  D+V +VY  +            P     ++ LE++ +G FI+   P G L Y   G++QI    + A        +G +A GTGITP+   ++A   +  D T  +L++A+++  + LL  ELE+ A     R ++   L R ++    +   G +    +  +LP P  +TL+++CGPPAM++   LP L  L +  +  F +
Sbjct:   52 LIDREEVSPDTRRFRFALPSPEHILGLPVGQHIYLTVR---IDGQLVIRPYTPVSSDDDKGFMDLVIKVYFKNVHPKF-------PEGGKMSQYLESMEIGDFIDVRGPSGLLVYDGQGVFQIKSDKKAAPETVMAKKVGMIAGGTGITPMLQLVRAIFKDKNDNTEISLLFANQTENDILLRTELEEIAAEQPNRFKLWFTLDRPEEGWKYSK--GFISADMIKDHLPPPDDDTLILMCGPPAMINFACLPNLDKLGYTPKMRFAY 306
[Close]
BLAST of jgi.p|Trimin1|169722 vs. uniprot
Match: T1KFT9_TETUR (NADH-cytochrome b5 reductase n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1KFT9_TETUR)

HSP 1 Score: 105 bits (262), Expect = 4.650e-23
Identity = 73/266 (27.44%), Postives = 131/266 (49.25%), Query Frame = 1 
Query:   55 LLRRERISRTAHRFTFAPADPRFAAQCLPGQHLQLSISDAATGAHGAARSFTPVSIAPD-GTFDVVFRVYSYSSXXXXXXSSGDVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQISGRAQRAT------NIGFVAAGTGITPVYAALQAALGNPADATRFTLVYASRSRGEALLSAELEDAAERAGGRLRVVHVLSRDQDAAMTTTVYGRLDEAKLSAYLPAPSVETLLMVCGPPAMVHGLVLPALKSLQHDDEQVFV 831
            L+ +E I+    RF F     R      PGQH+ LS   A        R ++PVS     G FD+V +VY  +          + P     ++ LE++ +G  I+   P G+L Y + G + I    + A       N+G +A GTGI P++  +   + NP D T+  L++A+ +  + LL  ELE+ +++ G ++++ + L +  +    +   G +DE  +  ++P PS ++++++CGPP M+     P L  L + + + FV
Sbjct:   46 LIAKENINWNTRRFRFGLPTERHVLGVNPGQHIYLS---AQGNNELIIRPYSPVSSDETLGYFDLVIKVYFKNDHP-------NYPDGGKMSQYLESMAIGDKIDIRGPEGKLIYASKGDFLIKKTRKSAAEKFNYKNVGMIAGGTGIAPLFRIINEIIDNPEDNTKVWLIFANNNPDDILLKEELEEISQKHGDQVKIWYTLVKADEGWKYSV--GFVDENMIKEHMPPPSDDSIILMCGPPPMIKFACTPNLDKLGYSESKRFV 299
[Close]
BLAST of jgi.p|Trimin1|169722 vs. uniprot
Match: A0A4S8K5Z5_MUSBA (Uncharacterized protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8K5Z5_MUSBA)

HSP 1 Score: 107 bits (267), Expect = 5.160e-23
Identity = 78/259 (30.12%), Postives = 126/259 (48.65%), Query Frame = 1 
Query:   49 CALLRRERISRTAHRFTFAPADPRFAAQCLPGQHLQL--SISDAATGAHGAARSFTPVSIAPD-GTFDVVFRVYSYSSXXXXXXSSGDVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQISGRAQRATNIGFVAAGTGITPVYAALQAALGNPADATRFTLVYASRSRGEALLSAELEDAAERAGGRLRVVHVLSRDQDAAMTTTVYGRLDEAKLSAYLPAP-SVETLLMVCGPPAMVHGLVLPALKSLQHD 813
            C L+ R   SR    F FA            G+H+ L  +I D         R +TP S   + G F+++ +VY           +   P+    ++ LE+LPVG  ++   P G + Y   G + + G+ + A  +  +A GTGITPVY  ++AAL +P D T   LVYA+R+  + LL  EL+        +L+  +V+S  +         GR+ E+ L  ++P   S +TL++ CGPP M+   V+P L+ + +D
Sbjct:  172 CKLVSRMAASRDVRLFRFALPSADQVLGLPVGKHIFLYATIDDKL-----CMRPYTPTSSVDEVGHFELLIKVY-------FKGENARFPNGGLMSQHLESLPVGSTLDVKGPFGHIEYTGRGNFLVQGKPRIAKRLAMIAGGTGITPVYQVIRAALQDPEDHTEMHLVYANRTAEDILLREELDGWEREHPAQLKAWYVISEVKQGERWRYSTGRVTESILRGHIPVGGSDDTLVLACGPPPMIQLAVVPNLEKMGYD 418
[Close]
BLAST of jgi.p|Trimin1|169722 vs. uniprot
Match: H2ZN53_CIOSA (NADH-cytochrome b5 reductase n=2 Tax=Ciona savignyi TaxID=51511 RepID=H2ZN53_CIOSA)

HSP 1 Score: 105 bits (262), Expect = 5.260e-23
Identity = 76/267 (28.46%), Postives = 130/267 (48.69%), Query Frame = 1 
Query:   55 LLRRERISRTAHRFTFAPADPRFAAQCLPGQHLQLSISDAATGAHGAARSFTPVSIAPD-GTFDVVFRVYSYSSXXXXXXSSGDVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQIS------GRAQRATNIGFVAAGTGITPVYAALQAALGNPADATRFTLVYASRSRGEALLSAELEDAAERAGGRLRVVHVLSRDQDAAMTTTVYGRLDEAKLSAYLPAPSVETLLMVCGPPAMVHGLVLPALKSLQHDDEQVFVF 834
            L+R+E+I+    +F FA    +       G+H+ LS   A        R +TPV+   D G  D+V +VY  ++           P     ++ LE LP+G  I+   P G + Y   GI+ +         A++A  I  +A GTGITP+   ++  L +P+D T   L+YA+++  + L+  ELE+ AE      ++ + L R       ++  G ++E  +   LPAP ++ L+++CGPP M+    LP L+ + H   ++  F
Sbjct:   53 LIRKEKITHDTRKFVFALPSEKHILGLTVGKHIFLS---ARIDGKLVVRPYTPVTSDDDQGHMDLVVKVYFKNTHEKF-------PEGGKMSQYLENLPIGETIDVRGPNGLIEYRTKGIFSVRLEKNGLSYAKKAKEIAMIAGGTGITPMLQIIRQCLKDPSDHTVMHLLYANQTENDILVRKELEECAEADPKHFKLWYTLDRPPTDWKYSS--GFINEDMIRDRLPAPGIDCLVLLCGPPPMIKFACLPNLEKVGHGSGRICTF 307
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169722 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C990_9STRA1.390e-185100.00NADH-cytochrome b5 reductase n=1 Tax=Tribonema min... [more]
A0A484MCA7_9ASTE9.960e-2733.21Nitrate reductase (NADH) n=3 Tax=Cuscuta sect. Cle... [more]
F6ZGS5_CIOIN1.360e-2629.21NADH-cytochrome b5 reductase n=2 Tax=Ciona intesti... [more]
UPI00064B6D691.570e-2431.00NADH-cytochrome b5 reductase 2 n=1 Tax=Sorex arane... [more]
UPI0019D688133.230e-2432.71nitrate reductase [NADH]-like n=1 Tax=Panicum virg... [more]
A0A7S4PS67_9CRYP1.810e-2329.77Hypothetical protein n=1 Tax=Cryptomonas parameciu... [more]
A0A6J8E2Z9_MYTCO1.920e-2328.84NADH-cytochrome b5 reductase n=2 Tax=Mytilus corus... [more]
T1KFT9_TETUR4.650e-2327.44NADH-cytochrome b5 reductase n=1 Tax=Tetranychus u... [more]
A0A4S8K5Z5_MUSBA5.160e-2330.12Uncharacterized protein n=1 Tax=Musa balbisiana Ta... [more]
H2ZN53_CIOSA5.260e-2328.46NADH-cytochrome b5 reductase n=2 Tax=Ciona savigny... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_66contigContig_66:241201..242363 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|169722|e_gw1.66.144.1
BiGG ReactioniMM904.YKL150W
BRITEko00000,ko00001,ko01000,ko01009
KEGG rclassRC00017
KEGG ReactionR00100,R02239
KEGG Pathwayko00520,ko00561,ko00564,ko01100,ko01110,map00520,map00561,map00564,map01100,map01110
KEGG koko:K00326,ko:K15728
EC1.6.2.2,3.1.3.4
GOsGO:0003674,GO:0003824,GO:0004128,GO:0005488,GO:0005507,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005758,GO:0005794,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0006950,GO:0006970,GO:0006979,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008610,GO:0009058,GO:0009505,GO:0009628,GO:0009651,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016491,GO:0016651,GO:0016653,GO:0019867,GO:0030312,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031306,GO:0031307,GO:0031966,GO:0031967,GO:0031968,GO:0031970,GO:0031974,GO:0031975,GO:0032592,GO:0033554,GO:0034599,GO:0042221,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0046165,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0070013,GO:0070887,GO:0071704,GO:0071944,GO:0097384,GO:0098573,GO:0098588,GO:0098805,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653
Preferred nameMCR1
Descriptioncytochrome-b5 reductase activity, acting on NAD(P)H
COG categoryCH
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0543@1|root,KOG0534@2759|Eukaryota
Evalue4.18e-31
Seed ortholog55529.EKX37340
Hectar predicted targeting categorymitochondrion
TranscriptId170044
TrackFilteredModels1
ProteinId169722
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169722gene_9663Tribonema minus UTEX_B_3156 geneContig_66 241201..242363 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9663_1exon_9663_1Tribonema minus UTEX_B_3156 exonContig_66 241201..241851 +
exon_9663_2exon_9663_2Tribonema minus UTEX_B_3156 exonContig_66 242178..242363 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9663CDS_9663Tribonema minus UTEX_B_3156 CDSContig_66 241201..241851 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169722Trimin1|169722|e_gw1.66.144.1Tribonema minus UTEX_B_3156 polypeptideContig_66 241201..242363 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9663 ID=mRNA_9663|Name=jgi.p|Trimin1|169722|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=837bp|location=Sequence derived from alignment at Contig_66:241201..242363+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGAGCGCTGCTGCACCAGAACACGCGCGCGACGCCTGGACACGCTG
CGCGCTGCTGCGGCGCGAGCGCATCTCGCGCACGGCCCACCGCTTCACCT
TTGCGCCCGCGGACCCGCGCTTTGCGGCGCAGTGCCTGCCGGGACAGCAC
CTGCAGCTGAGCATCAGCGACGCCGCGACGGGCGCGCACGGCGCCGCGCG
CAGCTTCACACCCGTGAGCATCGCGCCCGACGGCACGTTCGACGTCGTCT
TCAGGGTCTACAGCTACAGCAGCTCCTCTTCCTCCTCAACTTCAAGTGGT
GATGTGCCGCACTCTTCGACCTTCACCGAGACGCTCGAAGCGCTGCCCGT
CGGCGGTTTCATCGAGGCCTCCACACCGCGCGGCCGGCTGAGATACATCG
CCGCCGGCATCTATCAGATCAGCGGCAGGGCTCAGCGCGCTACTAATATA
GGGTTTGTGGCCGCCGGAACGGGCATCACGCCCGTGTATGCGGCTCTACA
GGCAGCGCTCGGCAATCCTGCTGATGCGACGCGGTTCACGCTCGTGTACG
CGAGCCGCTCTCGCGGCGAGGCGCTGCTGAGCGCTGAGCTTGAAGACGCG
GCAGAGAGGGCTGGCGGCCGCCTGCGCGTCGTGCACGTGCTGAGCCGTGA
CCAAGACGCTGCAATGACAACTACCGTATATGGCAGACTGGACGAGGCAA
AGCTATCAGCATACCTACCAGCCCCATCCGTGGAGACGCTCCTGATGGTC
TGCGGCCCGCCTGCCATGGTGCACGGCCTGGTGCTCCCAGCGCTCAAGAG
TCTTCAGCACGATGACGAGCAAGTGTTCGTCTTTTGA
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protein sequence of jgi.p|Trimin1|169722

>Trimin1|169722|e_gw1.66.144.1 ID=Trimin1|169722|e_gw1.66.144.1|Name=jgi.p|Trimin1|169722|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=279bp
MLSAAAPEHARDAWTRCALLRRERISRTAHRFTFAPADPRFAAQCLPGQH
LQLSISDAATGAHGAARSFTPVSIAPDGTFDVVFRVYSYSSSSSSSTSSG
DVPHSSTFTETLEALPVGGFIEASTPRGRLRYIAAGIYQISGRAQRATNI
GFVAAGTGITPVYAALQAALGNPADATRFTLVYASRSRGEALLSAELEDA
AERAGGRLRVVHVLSRDQDAAMTTTVYGRLDEAKLSAYLPAPSVETLLMV
CGPPAMVHGLVLPALKSLQHDDEQVFVF*
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mRNA from alignment at Contig_66:241201..242363+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9663 ID=mRNA_9663|Name=jgi.p|Trimin1|169722|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1163bp|location=Sequence derived from alignment at Contig_66:241201..242363+ (Tribonema minus UTEX_B_3156 )
ATGCTGAGCGCTGCTGCACCAGAACACGCGCGCGACGCCTGGACACGCTG
CGCGCTGCTGCGGCGCGAGCGCATCTCGCGCACGGCCCACCGCTTCACCT
TTGCGCCCGCGGACCCGCGCTTTGCGGCGCAGTGCCTGCCGGGACAGCAC
CTGCAGCTGAGCATCAGCGACGCCGCGACGGGCGCGCACGGCGCCGCGCG
CAGCTTCACACCCGTGAGCATCGCGCCCGACGGCACGTTCGACGTCGTCT
TCAGGGTCTACAGCTACAGCAGCTCCTCTTCCTCCTCAACTTCAAGTGGT
GATGTGCCGCACTCTTCGACCTTCACCGAGACGCTCGAAGCGCTGCCCGT
CGGCGGTTTCATCGAGGCCTCCACACCGCGCGGCCGGCTGAGATACATCG
CCGCCGGCATCTATCAGATCAGCGGCAGGGCTCAGCGCGCTACTAATATA
GGGTTTGTGGCCGCCGGAACGGGCATCACGCCCGTGTATGCGGCTCTACA
GGCAGCGCTCGGCAATCCTGCTGATGCGACGCGGTTCACGCTCGTGTACG
CGAGCCGCTCTCGCGGCGAGGCGCTGCTGAGCGCTGAGCTTGAAGACGCG
GCAGAGAGGGCTGGCGGCCGCCTGCGCGTCGTGCACGTGCTGAGCCGTGA
CGTGGCCAGGTGAGCACTGCTGCTGGCGTGCGTGCTGACAAACAGCAAAA
CCTATCTTGCTTTACAATAAGCAGTCGATACAATTGCAAGCGATGATACA
CGTGTCGTGGGGGTCATCTGTCAGCAAGGCACTTCCGCTGCAAGCGCAAC
ACTTGTGCTTATACTGTTAGTGGATGAACGTGCTGCACCTGGTGGAGCGC
TGATGTATTGTTTCACGCATACAGTTGTGCACATTTGCTGCAGCCATGAG
ATTACCACACTGCTAAATGTTTGTCACTTTTTTTGCATTCTCAACGCTGC
AGTGAGGACAACCGGTCGCCACAAAAGCAAGACGCTGCAATGACAACTAC
CGTATATGGCAGACTGGACGAGGCAAAGCTATCAGCATACCTACCAGCCC
CATCCGTGGAGACGCTCCTGATGGTCTGCGGCCCGCCTGCCATGGTGCAC
GGCCTGGTGCTCCCAGCGCTCAAGAGTCTTCAGCACGATGACGAGCAAGT
GTTCGTCTTTTGA
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Coding sequence (CDS) from alignment at Contig_66:241201..242363+

>mRNA_9663 ID=mRNA_9663|Name=jgi.p|Trimin1|169722|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=837bp|location=Sequence derived from alignment at Contig_66:241201..242363+ (Tribonema minus UTEX_B_3156 )
ATGCTGAGCGCTGCTGCACCAGAACACGCGCGCGACGCCTGGACACGCTG
CGCGCTGCTGCGGCGCGAGCGCATCTCGCGCACGGCCCACCGCTTCACCT
TTGCGCCCGCGGACCCGCGCTTTGCGGCGCAGTGCCTGCCGGGACAGCAC
CTGCAGCTGAGCATCAGCGACGCCGCGACGGGCGCGCACGGCGCCGCGCG
CAGCTTCACACCCGTGAGCATCGCGCCCGACGGCACGTTCGACGTCGTCT
TCAGGGTCTACAGCTACAGCAGCTCCTCTTCCTCCTCAACTTCAAGTGGT
GATGTGCCGCACTCTTCGACCTTCACCGAGACGCTCGAAGCGCTGCCCGT
CGGCGGTTTCATCGAGGCCTCCACACCGCGCGGCCGGCTGAGATACATCG
CCGCCGGCATCTATCAGATCAGCGGCAGGGCTCAGCGCGCTACTAATATA
GGGTTTGTGGCCGCCGGAACGGGCATCACGCCCGTGTATGCGGCTCTACA
GGCAGCGCTCGGCAATCCTGCTGATGCGACGCGGTTCACGCTCGTGTACG
CGAGCCGCTCTCGCGGCGAGGCGCTGCTGAGCGCTGAGCTTGAAGACGCG
GCAGAGAGGGCTGGCGGCCGCCTGCGCGTCGTGCACGTGCTGAGCCGTGA
CCAAGACGCTGCAATGACAACTACCGTATATGGCAGACTGGACGAGGCAA
AGCTATCAGCATACCTACCAGCCCCATCCGTGGAGACGCTCCTGATGGTC
TGCGGCCCGCCTGCCATGGTGCACGGCCTGGTGCTCCCAGCGCTCAAGAG
TCTTCAGCACGATGACGAGCAAGTGTTCGTCTTTTGA
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