Trimin1|352213|estExt_Genemark1.C_Ctg_1120021 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352213
Unique NameTrimin1|352213|estExt_Genemark1.C_Ctg_1120021
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length114
Homology
[Close]
BLAST of jgi.p|Trimin1|352213 vs. uniprot
Match: A0A835ZI17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI17_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.330e-66
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 
Query:    1 MEANRLVKPRGHQTGENVYNFMSREAELREARRAVEENNRIMAVSKWAQSSEAKVQRAKLLREAKSRAAELRDLSRELKARRTARLRDLYDRETLEVQAELHSRGLAFATHNV 113
            MEANRLVKPRGHQTGENVYNFMSREAELREARRAVEENNRIMAVSKWAQSSEAKVQRAKLLREAKSRAAELRDLSRELKARRTARLRDLYDRETLEVQAELHSRGLAFATHNV
Sbjct:    1 MEANRLVKPRGHQTGENVYNFMSREAELREARRAVEENNRIMAVSKWAQSSEAKVQRAKLLREAKSRAAELRDLSRELKARRTARLRDLYDRETLEVQAELHSRGLAFATHNV 113
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352213 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZI17_9STRA1.330e-66100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..81
IPR029375Protein CFAP141PFAMPF15104DUF4558coord: 28..110
e-value: 5.5E-13
score: 48.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_112contigContig_112:153155..155325 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352213mRNA_15513Tribonema minus UTEX_B_3156 mRNAContig_112 153120..155325 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352213|estExt_Genemark1.C_Ctg_1120021 ID=Trimin1|352213|estExt_Genemark1.C_Ctg_1120021|Name=jgi.p|Trimin1|352213|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=114bp
MEANRLVKPRGHQTGENVYNFMSREAELREARRAVEENNRIMAVSKWAQS
SEAKVQRAKLLREAKSRAAELRDLSRELKARRTARLRDLYDRETLEVQAE
LHSRGLAFATHNV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029375CFAP141