Trimin1|350529|estExt_Genemark1.C_Ctg_650062 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350529
Unique NameTrimin1|350529|estExt_Genemark1.C_Ctg_650062
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1711
Homology
BLAST of jgi.p|Trimin1|350529 vs. uniprot
Match: A0A835YLZ2_9STRA (tRNA(Ile)-lysidine synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLZ2_9STRA)

HSP 1 Score: 2468 bits (6397), Expect = 0.000e+0
Identity = 1644/1644 (100.00%), Postives = 1644/1644 (100.00%), Query Frame = 0
Query:    1 MAAAALLPAALLLXXXLPAAQATPLPPLPTPLQQPVKPVKPKPLAVQAYFVAVPGPCFAAEDADCEAGAPIAXXXXXXXXXXXXXXXXSEFRGQRANRSTPGTVDYMNYVNFPSPDTVLLYKGVACLKVCIMQPGFNIDHFVVLPAADAPPAAGPYGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALPGVITGTLFDLGDNAMVAGVVPPNPPKASGYGVKXXXXXXXVVPGPPGVRGDAPQVRTAACDTCPGGWAIEAAADGDFFSYTATLPKAGKYVVGANVGSASPLPKGNRVVVMAGAGECIERAAPYNCNPALEATAAVALDAAFTSTGGFAVFEMFMGDPIVLPAGDACLQLCALGAPVSVSNIDVWATYDPIKVTIPGVVEAENFDIGGPGVTFFETTPDNNGGNIGYRPDAPSIDVEFGNNADKVMSNDADLNWIDAGEWWRYTVXXXXXXXXXXXXXXXXXXXXXAVTPQATYAAAMRAGRAAPTPEPGPMARVLTVPGACAATKPLDCAAKYNYGPRAKPADPALLLDVVYPDALAEGYYNYHSIVSGGDAVQMDAGPHCIQVCALQGDFHFDSLDLEQEEILATPAPTTPPAAAEPGSDXXXXXXXXXXXXXXXXXXXXXXLSTGAVVAXXXXXXAVGAVAVFGVTRLLALKGSKTVANNGVPEQQGMWPGDRASVLGATDAIDLLLRGRYGALLEDAQAGKLQAWADGPDACLALILLLDQFSRHIYRDSADRDALVARCDALALPLAEGALDKGWQWRLSAAQHAFLLMPLRHARPPRRERLQRVLDEVAAREAREERGATEVLRRFRRATVRRLQXXXXXXXXXXXXXXXXXXXXAREECGGDAXXXXXXXXXXXXXXXXVREQRGXXXXXXXXXXXXXXXXXELQGASAPDGGDDILERAAFDADESDMHKNKLVRAVDAFARARGLRAAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLGTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSGSXXXXXXXXXXXXSSAANSIXXXXXXXXXXXXXXXXXXXXXXXXAAGSSTPVTMAISLSGGVDSMVLAKILHHLQPAYGWRLVAVHIDYANRAESGKEADFVEQCVXXXXXXXXXXXTEPTSCHSLSITFRKRVVSEVTRGVTDRAEYEAVSREAANASRMAVTDEDRRDARYAAYAEVLREFAPCPAILFGHHRGDVQENVVSNVMRGCSLLKVAGMGEESINSGVKVWRPLLAFDKDAIFDFAHRYSVPYFKDTTPLWSTRGKLRNGLVPLLKDMYGDGVLGHLSALAAGSDELASELRRELFQPFWDSVERCPMGASVDLMPYRGKGLYFWREALMVLLHSLGLPMAXXXXXXXXXXXXXXXXXXXXXXXXXVSDRALITTLRRLGEPNAPPPSAAWWPLRREYRCYCSEARIEGVLYILQPAAAPPEPYAVAAEGTEVEVSEPGPVVAADQLAAHKKGSRSXXXXXXXXXXGWLPELLPPPFADIRGFMSGAFSHTLPIPTSPPHDLRVAPPPLLRERNAQRPDAAAQRRAEAPLPFPFRGMDPCLRACAPLVSCARGQAALEGWGDAAGGGVRVVRVTYRYVGSAAASSADA 1644
            MAAAALLPAALLLXXXLPAAQATPLPPLPTPLQQPVKPVKPKPLAVQAYFVAVPGPCFAAEDADCEAGAPIAXXXXXXXXXXXXXXXXSEFRGQRANRSTPGTVDYMNYVNFPSPDTVLLYKGVACLKVCIMQPGFNIDHFVVLPAADAPPAAGPYGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALPGVITGTLFDLGDNAMVAGVVPPNPPKASGYGVKXXXXXXXVVPGPPGVRGDAPQVRTAACDTCPGGWAIEAAADGDFFSYTATLPKAGKYVVGANVGSASPLPKGNRVVVMAGAGECIERAAPYNCNPALEATAAVALDAAFTSTGGFAVFEMFMGDPIVLPAGDACLQLCALGAPVSVSNIDVWATYDPIKVTIPGVVEAENFDIGGPGVTFFETTPDNNGGNIGYRPDAPSIDVEFGNNADKVMSNDADLNWIDAGEWWRYTVXXXXXXXXXXXXXXXXXXXXXAVTPQATYAAAMRAGRAAPTPEPGPMARVLTVPGACAATKPLDCAAKYNYGPRAKPADPALLLDVVYPDALAEGYYNYHSIVSGGDAVQMDAGPHCIQVCALQGDFHFDSLDLEQEEILATPAPTTPPAAAEPGSDXXXXXXXXXXXXXXXXXXXXXXLSTGAVVAXXXXXXAVGAVAVFGVTRLLALKGSKTVANNGVPEQQGMWPGDRASVLGATDAIDLLLRGRYGALLEDAQAGKLQAWADGPDACLALILLLDQFSRHIYRDSADRDALVARCDALALPLAEGALDKGWQWRLSAAQHAFLLMPLRHARPPRRERLQRVLDEVAAREAREERGATEVLRRFRRATVRRLQXXXXXXXXXXXXXXXXXXXXAREECGGDAXXXXXXXXXXXXXXXXVREQRGXXXXXXXXXXXXXXXXXELQGASAPDGGDDILERAAFDADESDMHKNKLVRAVDAFARARGLRAAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLGTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSGSXXXXXXXXXXXXSSAANSIXXXXXXXXXXXXXXXXXXXXXXXXAAGSSTPVTMAISLSGGVDSMVLAKILHHLQPAYGWRLVAVHIDYANRAESGKEADFVEQCVXXXXXXXXXXXTEPTSCHSLSITFRKRVVSEVTRGVTDRAEYEAVSREAANASRMAVTDEDRRDARYAAYAEVLREFAPCPAILFGHHRGDVQENVVSNVMRGCSLLKVAGMGEESINSGVKVWRPLLAFDKDAIFDFAHRYSVPYFKDTTPLWSTRGKLRNGLVPLLKDMYGDGVLGHLSALAAGSDELASELRRELFQPFWDSVERCPMGASVDLMPYRGKGLYFWREALMVLLHSLGLPMAXXXXXXXXXXXXXXXXXXXXXXXXXVSDRALITTLRRLGEPNAPPPSAAWWPLRREYRCYCSEARIEGVLYILQPAAAPPEPYAVAAEGTEVEVSEPGPVVAADQLAAHKKGSRSXXXXXXXXXXGWLPELLPPPFADIRGFMSGAFSHTLPIPTSPPHDLRVAPPPLLRERNAQRPDAAAQRRAEAPLPFPFRGMDPCLRACAPLVSCARGQAALEGWGDAAGGGVRVVRVTYRYVGSAAASSADA
Sbjct:    1 MAAAALLPAALLLXXXLPAAQATPLPPLPTPLQQPVKPVKPKPLAVQAYFVAVPGPCFAAEDADCEAGAPIAXXXXXXXXXXXXXXXXSEFRGQRANRSTPGTVDYMNYVNFPSPDTVLLYKGVACLKVCIMQPGFNIDHFVVLPAADAPPAAGPYGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALPGVITGTLFDLGDNAMVAGVVPPNPPKASGYGVKXXXXXXXVVPGPPGVRGDAPQVRTAACDTCPGGWAIEAAADGDFFSYTATLPKAGKYVVGANVGSASPLPKGNRVVVMAGAGECIERAAPYNCNPALEATAAVALDAAFTSTGGFAVFEMFMGDPIVLPAGDACLQLCALGAPVSVSNIDVWATYDPIKVTIPGVVEAENFDIGGPGVTFFETTPDNNGGNIGYRPDAPSIDVEFGNNADKVMSNDADLNWIDAGEWWRYTVXXXXXXXXXXXXXXXXXXXXXAVTPQATYAAAMRAGRAAPTPEPGPMARVLTVPGACAATKPLDCAAKYNYGPRAKPADPALLLDVVYPDALAEGYYNYHSIVSGGDAVQMDAGPHCIQVCALQGDFHFDSLDLEQEEILATPAPTTPPAAAEPGSDXXXXXXXXXXXXXXXXXXXXXXLSTGAVVAXXXXXXAVGAVAVFGVTRLLALKGSKTVANNGVPEQQGMWPGDRASVLGATDAIDLLLRGRYGALLEDAQAGKLQAWADGPDACLALILLLDQFSRHIYRDSADRDALVARCDALALPLAEGALDKGWQWRLSAAQHAFLLMPLRHARPPRRERLQRVLDEVAAREAREERGATEVLRRFRRATVRRLQXXXXXXXXXXXXXXXXXXXXAREECGGDAXXXXXXXXXXXXXXXXVREQRGXXXXXXXXXXXXXXXXXELQGASAPDGGDDILERAAFDADESDMHKNKLVRAVDAFARARGLRAAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLGTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSGSXXXXXXXXXXXXSSAANSIXXXXXXXXXXXXXXXXXXXXXXXXAAGSSTPVTMAISLSGGVDSMVLAKILHHLQPAYGWRLVAVHIDYANRAESGKEADFVEQCVXXXXXXXXXXXTEPTSCHSLSITFRKRVVSEVTRGVTDRAEYEAVSREAANASRMAVTDEDRRDARYAAYAEVLREFAPCPAILFGHHRGDVQENVVSNVMRGCSLLKVAGMGEESINSGVKVWRPLLAFDKDAIFDFAHRYSVPYFKDTTPLWSTRGKLRNGLVPLLKDMYGDGVLGHLSALAAGSDELASELRRELFQPFWDSVERCPMGASVDLMPYRGKGLYFWREALMVLLHSLGLPMAXXXXXXXXXXXXXXXXXXXXXXXXXVSDRALITTLRRLGEPNAPPPSAAWWPLRREYRCYCSEARIEGVLYILQPAAAPPEPYAVAAEGTEVEVSEPGPVVAADQLAAHKKGSRSXXXXXXXXXXGWLPELLPPPFADIRGFMSGAFSHTLPIPTSPPHDLRVAPPPLLRERNAQRPDAAAQRRAEAPLPFPFRGMDPCLRACAPLVSCARGQAALEGWGDAAGGGVRVVRVTYRYVGSAAASSADA 1644          
BLAST of jgi.p|Trimin1|350529 vs. uniprot
Match: A0A836CF80_9STRA (Plastocyanin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF80_9STRA)

HSP 1 Score: 390 bits (1002), Expect = 6.750e-112
Identity = 246/584 (42.12%), Postives = 294/584 (50.34%), Query Frame = 0
Query:   43 PLAVQAYFVAVPGPCFAAEDADCEAGAPIAXXXXXXXXXXXXXXXXSEFRGQRANRSTPGTVDYMNYVNFPSPDTVLLYKGVACLKVCIMQPGFNIDHFVVLPAADAPPA-AGPYGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPA-LPGVITGTLFDLGDNAMVAGVVPPNPPKASGYGVKXXXXXXXVVPGPPGVRGDAPQ----------------------------VRTAACDTCPGGWAIEAAADGDFFSYTATLPKAGKYVVGANVGSASPLPKGNRVVVMAGAGECIERAAPYNCNPALEATAAVALDAAFTSTGGFAVFEMFMGDPIVLPAGDACLQLCALGAPVS------------VSNIDVWATYDPIKVTIPGVVEAENFDIGGPGVTFFETTPDNNGGNIGYRPDAPSIDVEFGNNADKVMSNDADLNWIDAGEWWRYTVXXXXXXXXXXXXXXXXXXXXXAVTPQATYAAAMRAGRAAPTPEPGPMARVLTVPGACAATKPLDCAAKYNYGPRAKPADPALLLDVVYPDALAEGYYNYHSIVSGGD----AVQMDAGPHCIQ 580
            PLAVQ Y    PG  F A D  C  GAP+A                           TPGTVDY+ Y  FPSP  +LLY+G  C+K+C+   GFNID F + PA D PP   GP  G                                 APA LPGV+  T FDLG NAMV GV+ P PPK++ YGV+       V+P PP +R DA                                TA C+ CPGG+A+   A G+F                        LPKGNR+VVMAG G+CI RAAPY C PALE  A+VALD AF STGG                    +++C+LGAP S            +S   VW  YDP+KVTIPG +EAENFDIG  GVT+F+TTP+NNGGN+GYRPDAP +DVE GN  DK+MSN+AD+ W+  GEWWRYTV                     A  P+A Y AA+   RAAPTP+PG MA VLT              A Y YG RA PA PALLL+ VYPD LA+GYY YH++  GG     +V+MDAG HC+Q
Sbjct:  472 PLAVQMYVAVTPGAWFEAADPVCADGAPMA---------------------------TPGTVDYVTYAAFPSPKNLLLYEGAVCVKLCVTTGGFNIDFFSLAPALDVPPPPTGPING---------------------------------APAALPGVVAATAFDLGTNAMVNGVLVPKPPKSASYGVQ-------VMPAPPSMRADAAPSASYGVESXXXXXXXXXXXXXXXXXXXXXSTAECEACPGGFAVRGLAQGEFLL----------------------LPKGNRIVVMAGMGQCIARAAPYKCQPALERRASVALDQAFASTGG--------------------IRVCSLGAPFSDMHXXXXXXXXSLSEFGVWPVYDPVKVTIPGTIEAENFDIGTMGVTYFDTTPENNGGNVGYRPDAPEVDVEVGNANDKIMSNNADIKWVATGEWWRYTVT--------------------AHAPRAAYTAALSVARAAPTPDPGAMALVLT--------------AAYKYGERATPATPALLLEAVYPDDLADGYYAYHTLGGGGGGATRSVEMDAGQHCLQ 912          
BLAST of jgi.p|Trimin1|350529 vs. uniprot
Match: A0A835Z2H7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2H7_9STRA)

HSP 1 Score: 334 bits (857), Expect = 8.290e-99
Identity = 186/374 (49.73%), Postives = 222/374 (59.36%), Query Frame = 0
Query:  253 TAACDTCPGGWAIEAAADGDFFSYTATLPKAGKYVVGANVGSASPLPKGNRVVVMAGAGECIERAAPYNCNPALEATAAVALDAAFTSTGGFAVFEMFMGDPIVLPAGDACLQLCALGAPVS------------VSNIDVWATYDPIKVTIPGVVEAENFDIGGPGVTFFETTPDNNGGNIGYRPDAPSIDVEFGNNADKVMSNDADLNWIDAGEWWRYTVXXXXXXXXXXXXXXXXXXXXXAVTPQATYAAAMRAGRAAPTPEPGPMARVLTVPGACAATKPLDCAAKYNYGPRAKPADPALLLDVVYPDALAEGYYNYHSIVSGGD----AVQMDAGPHCIQVCALQGDFHFDSLDLEQEEILATPAPTTPP 610
            TA C+ CPGG+A+   A G+F                        LPKGNR+VVMAG G+CI RAAPY C PALE  A+VALD AF STGG                    +++C+LGAP S            +S   VW  YDP+KVTIPG +EAENFDIG  GVT+F+TTP+NNGGN+GYRPDAP +DVE GN  DK+MSN+AD+ W+  GEWWRYTV                     A  P+A Y AA+   RAAPTP+PG MA VLT              A Y YG RA PA PALLL+ VYPD LA+GYY YH++  GG     +V+MDAG HC+QVCALQGD HFDS+ +EQ  +LATPAPT  P
Sbjct:   44 TAECEACPGGFAVRGLAQGEFLL----------------------LPKGNRIVVMAGMGQCIARAAPYKCQPALERRASVALDQAFASTGG--------------------IRVCSLGAPFSDMHXXXXXXXXSLSEFGVWPVYDPVKVTIPGTIEAENFDIGTMGVTYFDTTPENNGGNVGYRPDAPEVDVEVGNANDKIMSNNADIKWVATGEWWRYTVT--------------------AHAPRAAYTAALSVARAAPTPDPGAMALVLT--------------AAYKYGERATPATPALLLEAVYPDDLADGYYAYHTLGGGGGGATRSVEMDAGQHCLQVCALQGDSHFDSITIEQSALLATPAPTAAP 341          
BLAST of jgi.p|Trimin1|350529 vs. uniprot
Match: A0A6H5L0I6_9PHAE (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I6_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 1.940e-85
Identity = 205/547 (37.48%), Postives = 278/547 (50.82%), Query Frame = 0
Query: 1100 TMAISLSGGVDSMVLAKILHHLQPAYGWRLVAVHIDYANRAESGKEADFVEQCVXXXXXXXXXXXTEPTSCHSLSITFRKRVVSEVTRGVTDRAEYEAVSRE----AANASRMAVTDEDRRDARYAAYAEVLREFAPC-PAILFGHHRGDVQENVVSNVMRGCSLLKVAGMGEESINSGVKVWRPLLAFDKDAIFDFAHRYSVPYFKDTTPLWSTRGKLRNGLVPLLKDMYGDGVLGHLSALAAGSDELASELRRELFQPFWDSVERCPMGASVDLMPYRGKGLYFWREALMVLLHSLGLPMAXXXXXXXXXXXXXXXXXXXXXXXXXVSDRALITTLR-RLGEPNAPPPSAAWWPLRREYRCYCSEARIEGVLYILQPAA--APPEPYAVAAEGTEVEVSEPGPVVAADQLAAHKKGSRSXXXXXXXXXXGWLPELLPPPFADIRGFMSGAFSHTLPIPTSPPHDLRVAPPPLLRERNAQRPDAAAQRRAEAPLPFPFRGMDPCLRACAPLVSC--ARGQAALEGWGDAAGGGVRVVRVTYRYVGS 1636
            T+A+SLSGGVDSM L + L HLQP YG+ ++ +HIDY NR ESG+EADFVE                   C    + F KR + EV RGVT R EYE V+RE    A  A+    +++   D       E   E     PA++FGHH GDV+ENV++N+++GCS+L++AGM  E+  +GV+VWRP+L F KD ++DFAH++ VPYFKDTTP WSTRGKLR  L+P+++D++G GVLGHLSA+A  SD+L   + RELFQP WD     P+G  +D+  YR  GL FW+E L  L+H +G+PM                          V D+ L   +R  L      P    W  LR+EY  +       G LYI +      P   Y   AEGT V + + G V          +              G  P     PFA +   M G  S+ + +P +P   L V P                  RA+AP    +R +DP +R   PLV+   +R    L+        G R+V VT +Y G+
Sbjct:  128 TVAVSLSGGVDSMALCRALVHLQPVYGFEVMGIHIDYGNRHESGREADFVEGW-----------------CERHGVVFYKRAIGEVRRGVTARDEYEKVAREIRFDAYKAALGGRSNDGNGDDNEGGXKEEKGEGGGVRPAVMFGHHEGDVEENVLTNLIKGCSILELAGMSPENTVNGVRVWRPMLPFGKDVVYDFAHKFGVPYFKDTTPSWSTRGKLRRQLIPMMEDVFGSGVLGHLSAVARESDDLRDLVHRELFQPVWDKAVTQPLGLRLDVESYRSHGLLFWKEVLRQLVHKMGMPM--------------------------VRDKTLGMFVRDTLQRDTHVPLKDKWVELRKEYVGFLCG----GSLYIFRMGVFLPPNTSYGEKAEGTPVPL-DGGLVQVGPWRITTAETETKPPQELQDFERGRPPAANALPFASMDELMDGELSYVVAVPDTPEAALTVQP----------------GLRAKAPA---WRDVDPRIRRGMPLVAPPPSRDPPLLKE------SGARMVTVTLKYTGA 601          
BLAST of jgi.p|Trimin1|350529 vs. uniprot
Match: D8LRA1_ECTSI (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA1_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 1.010e-77
Identity = 191/539 (35.44%), Postives = 262/539 (48.61%), Query Frame = 0
Query: 1112 MVLAKILHHLQPAYGWRLVAVHIDYANRAESGKEADFVEQCVXXXXXXXXXXXTEPTSCHSLSITFRKRVVSEVTRGVTDRAEYEAVSREAANASRMAVTDEDRRDARY---------AAYAEVLREFAPCPAILFGHHRGDVQENVVSNVMRGCSLLKVAGMGEESINSGVKVWRPLLAFDKDAIFDFAHRYSVPYFKDTTPLWSTRGKLRNGLVPLLKDMYGDGVLGHLSALAAGSDELASELRRELFQPFWDSVERCPMGASVDLMPYRGKGLYFWREALMVLLHSLGLPMAXXXXXXXXXXXXXXXXXXXXXXXXXVSDRALITTLR-RLGEPNAPPPSAAWWPLRREYRCYCSEARIEGVLYILQPAA--APPEPYAVAAEGTEVEVSEPGPVVAADQLAAHKKGSRSXXXXXXXXXXGWLPELLPPPFADIRGFMSGAFSHTLPIPTSPPHDLRVAPPPLLRERNAQRPDAAAQRRAEAPLPFPFRGMDPCLRACAPLVSC--ARGQAALEGWGDAAGGGVRVVRVTYRYVGS 1636
            M L + L HL+P YG+ +V +HIDY NR ESG+EADFV+                   C    + F KR + EV RGVT R EYE V+RE    +  A      +D                E        PA++FGHH GDV+ENV++N+++GCS+L++AGM  E+  +GV+VWRP+L F KD ++DFAH++ VPYFKDTTP WSTRGKLR  L+P+++D++G GVLGHLSA+A  SD+L   + RELFQP WD     P+G  +D+  YR  GL FW+E L  L+H +G+PM                          V D+ L   +R  L      P    W  LR+EY  +       G LYI +      P   Y   AEGT V + + G V          +              G  P     PFA +   M G  S+ + +P +P   L V P                  RA+AP    +R +DP +R   PL++   +R    L+        G R+V VT +Y G+
Sbjct:    1 MALCRALVHLRPVYGFEVVGIHIDYGNRHESGREADFVQGW-----------------CARHGVVFYKRAIGEVRRGVTARDEYEKVAREIRFDAYKAALGGRSKDGNSXXXXXXXXGGGKEEKGEGGGGRPAVMFGHHEGDVEENVLTNLIKGCSILELAGMSPENTVNGVRVWRPMLPFGKDVVYDFAHKFGVPYFKDTTPSWSTRGKLRRQLIPMMEDVFGSGVLGHLSAVARESDDLRDLVHRELFQPVWDKAVTQPLGLRLDVESYRSHGLLFWKEVLRQLVHKMGMPM--------------------------VRDKTLGMFVRDTLQRDTHVPLKDKWVELRKEYVGFLCG----GSLYIFRMGVFLPPNTSYGEKAEGTPVPL-DGGLVQVGPWRITTAETETKLPQELQGFERGRPPAANALPFASMEELMDGELSYVVAVPDTPEAALTVQP----------------GLRAKAPA---WRDVDPRIRRGMPLLAPPPSRDPPLLKE------SGARMVTVTLKYTGA 466          
BLAST of jgi.p|Trimin1|350529 vs. uniprot
Match: A0A2P4X3F2_9STRA (tRNA(Ile)-lysidine synthetase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X3F2_9STRA)

HSP 1 Score: 249 bits (636), Expect = 3.410e-71
Identity = 136/284 (47.89%), Postives = 174/284 (61.27%), Query Frame = 0
Query: 1101 MAISLSGGVDSMVLAKILHHLQPAYG-WRLVAVHIDYANRAESGKEADFVEQCVXXXXXXXXXXXTEPTSCHSLSITFRKRVVSEVTRGVTDRAEYEAVSREAANASRMAVTDEDRRDARYAAYAEVLREFAPCPAILFGHHRGDVQENVVSNVMRGCSLLKVAGMGEESINSGVKVWRPLLAFDKDAIFDFAHRYSVPYFKDTTPLWSTRGKLRNGLVPLLKDMYGDGVLGHLSALAAGSDELASELRRELFQPFWDSVERCPMGASVDLMPYRGKGLYFWRE 1383
            +A+SLSGGVDSMV+A ++H L+  +G + +VAVH+DY NR ESG E D+V +                  C    I F  R + EV R  T R +YE VSRE                 RY+ YAEV+ ++   P + FGHHRGDVQENV+SN+M+G SLL + GM   SI +GV++WRPLL FDKD IFDFAH+Y VPYFKDTTP WSTRGKLRN LVPLL+DMYGDG L +LSAL A S + A  +  ++  P   SV +  +   VD      +  + W+E
Sbjct:    9 LAVSLSGGVDSMVVAYLMHKLREKHGGFSIVAVHLDYGNRPESGAECDYVRRW-----------------CERFGIIFHVRRIDEVKRATTRRDDYERVSREI----------------RYSTYAEVMEKYN-IPGMCFGHHRGDVQENVISNMMKGLSLLNLNGMQASSIVNGVRIWRPLLDFDKDVIFDFAHQYGVPYFKDTTPKWSTRGKLRNHLVPLLRDMYGDGFLNNLSALGAESTQCAELVDSQVLAPIMQSVGQSKVAVWVDCGLLTDQPFFVWKE 258          
BLAST of jgi.p|Trimin1|350529 vs. uniprot
Match: A0A8K1CKR2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKR2_PYTOL)

HSP 1 Score: 261 bits (666), Expect = 2.160e-70
Identity = 138/292 (47.26%), Postives = 179/292 (61.30%), Query Frame = 0
Query: 1101 MAISLSGGVDSMVLAKILHHLQPAYG-WRLVAVHIDYANRAESGKEADFVEQCVXXXXXXXXXXXTEPTSCHSLSITFRKRVVSEVTRGVTDRAEYEAVSREAANASRMAVTDEDRRDARYAAYAEVLREFAPCPAILFGHHRGDVQENVVSNVMRGCSLLKVAGMGEESINSGVKVWRPLLAFDKDAIFDFAHRYSVPYFKDTTPLWSTRGKLRNGLVPLLKDMYGDGVLGHLSALAAGSDELASELRRELFQPFWDSVERCPMGASVDLMPYRGKGLYFWREALMVLLHS 1391
            +A+SLSGGVDSMV+A +LH L+P +  +++VAVHIDY NR ESG E D+V +                  C    I F  R + EV R  T R +YE +S                RD RY+ YA+V+R++   P + FGHHRGDVQENV+SN+M+G SLL + GM E S+ +GV++WRPLLAFDKDAIF++AHRY VPYFKDTTP WSTRGKLRN LVPLL+DMYGDG L +LS L A S +    + + +  P   +V        VD      +  + W+E L  + HS
Sbjct:  225 LAVSLSGGVDSMVIAYLLHKLRPLHNNFQIVAVHIDYGNREESGAECDYVRRW-----------------CERFDILFHVRRIDEVKRASTKRDDYERIS----------------RDIRYSTYADVMRQYG-APGMCFGHHRGDVQENVISNMMKGLSLLNLNGMSESSVVNGVQIWRPLLAFDKDAIFEYAHRYGVPYFKDTTPAWSTRGKLRNHLVPLLRDMYGDGFLNNLSNLGAESTQCGELIDQSILGPILQTVGSSETAVWVDCSLLVDQPFFVWKEVLRTICHS 482          
BLAST of jgi.p|Trimin1|350529 vs. uniprot
Match: A0A7S2K031_9STRA (tRNA(Ile)-lysidine synthetase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K031_9STRA)

HSP 1 Score: 255 bits (651), Expect = 3.690e-70
Identity = 158/383 (41.25%), Postives = 207/383 (54.05%), Query Frame = 0
Query: 1097 TPVTMAISLSGGVDSMVLAKILHHLQPA--YGWRLVAVHIDYANRAESGKEADFVEQCVXXXXXXXXXXXTEPTSCHSLSITFRKRVVSEVTRGVTDRAEYEAVSREAANASRMAVTDEDRRDARYAAYAEVLREF-----APCPAILFGHHRGDVQENVVSNVMRGCSLLKVAGMGEESINSGVKVWRPLLAFDKDAIFDFAHRYSVPYFKDTTPLWSTRGKLRNGLVPLLKDMYGDGVLGHLSALAAGSDELASELRRELFQPFWDSVERCPMGASVDLMPYRGKGLYFWREALMVLLHSLGLPMAXXXXXXXXXXXXXXXXXXXXXXXXXVSDRALITTLRRLGEPNAPPPSAAWWPLRREYRCYCSEARIEGVLYILQP 1472
            T   + +SLSGGVDSMV+A +L +L+    +  R++AVHIDYANR ESG EA +VE+                  C+ L I +R RV+ EVTRGVT R EYE V+                RDARY  Y  V  EF     +  P +L GHH+GD++ENV+SN M+GC  L ++GM +      V VWRPLL  +KDA+FDFAH+Y VPYFKDTTPLWSTRGKLRN L+PLL +MYG+G + +LS LA  SD  A  L     +PF+  V+  PMG S D   YR  G++FWR  L  +LHS G  M                           +D+ + + + R+           W   RR+Y  Y      +G +Y+L P
Sbjct:  152 TTFPIIVSLSGGVDSMVIASVLSYLRRVEMFSLRVIAVHIDYANRPESGAEARYVEKY-----------------CNELGIEYRCRVIDEVTRGVTARDEYEKVA----------------RDARYNFYKCVQDEFQAQDGSKAP-VLLGHHKGDLRENVLSNSMKGCGPLDLSGMSDVGTVEKVVVWRPLLPLEKDAVFDFAHQYGVPYFKDTTPLWSTRGKLRNKLLPLLCEMYGEGSMLNLSNLAVESDA-AKHLFLASLEPFFARVKSFPMGLSFDTSEYRHHGIFFWRFVLRQVLHSHGRGM--------------------------FTDKCIQSFINRISTDKR---KTGWLQCRRDYAVYLDS---DGTVYVLHP 467          
BLAST of jgi.p|Trimin1|350529 vs. uniprot
Match: A0A2D4C4Z2_PYTIN (tRNA(Ile)-lysidine synthetase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4Z2_PYTIN)

HSP 1 Score: 262 bits (670), Expect = 3.940e-69
Identity = 139/292 (47.60%), Postives = 179/292 (61.30%), Query Frame = 0
Query: 1101 MAISLSGGVDSMVLAKILHHLQPAYG-WRLVAVHIDYANRAESGKEADFVEQCVXXXXXXXXXXXTEPTSCHSLSITFRKRVVSEVTRGVTDRAEYEAVSREAANASRMAVTDEDRRDARYAAYAEVLREFAPCPAILFGHHRGDVQENVVSNVMRGCSLLKVAGMGEESINSGVKVWRPLLAFDKDAIFDFAHRYSVPYFKDTTPLWSTRGKLRNGLVPLLKDMYGDGVLGHLSALAAGSDELASELRRELFQPFWDSVERCPMGASVDLMPYRGKGLYFWREALMVLLHS 1391
            +A+SLSGGVDSMV+A +LH L+  +  + +VAVHIDY NR ESG E D+V +                  C    I F  R V EV R  T R +YE +S                RD RY  YA V+ ++  CP + FGHHRGDVQENV+SN+M+G SLL + GM E S+ +GV++WRPLLAFDKDAIF+FAHRY VPYFKDTTP WSTRGKLRN L+PLL+DMYGDG L +LS L A S + +  + R +  P  D+V    +   +D     G+  + W+E L  + H+
Sbjct:  222 LAVSLSGGVDSMVIAYLLHKLRSQHNNFAIVAVHIDYGNREESGAECDYVRRW-----------------CERFGIIFHARRVDEVKRATTKRDDYERIS----------------RDIRYGTYATVMAQYG-CPGMCFGHHRGDVQENVISNMMKGISLLNLNGMSESSVVNGVRIWRPLLAFDKDAIFEFAHRYGVPYFKDTTPRWSTRGKLRNHLIPLLRDMYGDGFLNNLSNLGAESMQCSELVDRTVLSPILDTVGSSEVAVWLDCTRLIGQPFFVWKEVLREVCHA 479          
BLAST of jgi.p|Trimin1|350529 vs. uniprot
Match: H3GWY9_PHYRM (tRNA(Ile)-lysidine synthetase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWY9_PHYRM)

HSP 1 Score: 255 bits (651), Expect = 2.650e-68
Identity = 139/293 (47.44%), Postives = 178/293 (60.75%), Query Frame = 0
Query: 1101 MAISLSGGVDSMVLAKILHHLQPAYG-WRLVAVHIDYANRAESGKEADFVEQCVXXXXXXXXXXXTEPTSCHSLSITFRKRVVSEVTRGVTDRAEYEAVSREAANASRMAVTDEDRRDARYAAYAEVLREFAPCPAILFGHHRGDVQENVVSNVMRGCSLLKVAGMGEESINSGVKVWRPLLAFDKDAIFDFAHRYSVPYFKDTTPLWSTRGKLRNGLVPLLKDMYGDGVLGHLSALAAGSDELASELRRELFQPFWDSVERCPMGASVDLMPYRGKGLYFWREALMVLLHSL 1392
            +A+SLSGGVDSMV+A +LH L   +G +  VAVH+DY NRAES  E D+V +                  C    I F  R + EV R  T R +YE +SRE                 RY+ YA+VL ++   P + FGHHRGDVQENV+SN+M+G SLL + GM   SI +GV++WRPLL FDKDAIF+FAHRY VPYFKDTTP WSTRGKLRN LVPLL+DMYGDG L +LSAL A S + A  +  ++  P  +SV +  +   VD      +  + W+E    + HS+
Sbjct:  229 LAVSLSGGVDSMVVAYLLHKLSEKHGGFTTVAVHLDYGNRAESTAECDYVHRW-----------------CERFGIVFHVRRIDEVKRATTKRDDYERISREI----------------RYSTYADVLEKYN-APGMCFGHHRGDVQENVISNMMKGLSLLNLNGMAASSIVNGVRIWRPLLDFDKDAIFEFAHRYGVPYFKDTTPNWSTRGKLRNHLVPLLRDMYGDGFLNNLSALGAESTQCAELVDSQVLAPIMESVGQSEVAVWVDCGLLSDQPFFVWKEVFRQVCHSI 487          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350529 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YLZ2_9STRA0.000e+0100.00tRNA(Ile)-lysidine synthetase n=1 Tax=Tribonema mi... [more]
A0A836CF80_9STRA6.750e-11242.12Plastocyanin-like domain-containing protein n=1 Ta... [more]
A0A835Z2H7_9STRA8.290e-9949.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L0I6_9PHAE1.940e-8537.48tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus s... [more]
D8LRA1_ECTSI1.010e-7735.44tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus s... [more]
A0A2P4X3F2_9STRA3.410e-7147.89tRNA(Ile)-lysidine synthetase (Fragment) n=1 Tax=P... [more]
A0A8K1CKR2_PYTOL2.160e-7047.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2K031_9STRA3.690e-7041.25tRNA(Ile)-lysidine synthetase (Fragment) n=1 Tax=L... [more]
A0A2D4C4Z2_PYTIN3.940e-6947.60tRNA(Ile)-lysidine synthetase n=1 Tax=Pythium insi... [more]
H3GWY9_PHYRM2.650e-6847.44tRNA(Ile)-lysidine synthetase n=1 Tax=Phytophthora... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.260coord: 380..467
e-value: 8.5E-12
score: 47.3
NoneNo IPR availableGENE3D1.20.58.320coord: 683..753
e-value: 2.1E-14
score: 55.5
NoneNo IPR availableGENE3D2.60.120.260coord: 243..379
e-value: 7.5E-6
score: 28.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1030..1092
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1042..1068
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 949..986
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 595..635
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 970..986
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1493..1524
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1562..1583
NoneNo IPR availablePANTHERPTHR43033:SF3TRNA(ILE)-LYSIDINE/2-THIOCYTIDINE SYNTHASEcoord: 1152..1396
NoneNo IPR availablePANTHERPTHR43033:SF3TRNA(ILE)-LYSIDINE/2-THIOCYTIDINE SYNTHASEcoord: 867..1150
NoneNo IPR availableSUPERFAMILY52402Adenine nucleotide alpha hydrolases-likecoord: 1102..1327
IPR011063tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminalPFAMPF01171ATP_bind_3coord: 1180..1304
e-value: 6.4E-14
score: 52.0
coord: 1101..1154
e-value: 1.6E-9
score: 37.7
IPR010323Protein of unknown function DUF924PFAMPF06041DUF924coord: 697..850
e-value: 1.8E-20
score: 73.9
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 1095..1347
e-value: 2.5E-35
score: 123.7
IPR012094tRNA(Ile)-lysidine synthasePANTHERPTHR43033TRNA(ILE)-LYSIDINE SYNTHASE-RELATEDcoord: 867..1150
IPR012094tRNA(Ile)-lysidine synthasePANTHERPTHR43033TRNA(ILE)-LYSIDINE SYNTHASE-RELATEDcoord: 1152..1396
IPR012094tRNA(Ile)-lysidine synthaseHAMAPMF_01161tRNA_Ile_lys_syntcoord: 1095..1410
score: 14.868155
IPR012795tRNA(Ile)-lysidine synthase, N-terminalCDDcd01992PP-ATPasecoord: 1102..1319
e-value: 4.0506E-40
score: 145.403
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 698..834

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_65contigContig_65:589924..620596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350529mRNA_12692Tribonema minus UTEX_B_3156 mRNAContig_65 589814..620596 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350529|estExt_Genemark1.C_Ctg_650062 ID=Trimin1|350529|estExt_Genemark1.C_Ctg_650062|Name=jgi.p|Trimin1|350529|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1711bp
MAAAALLPAALLLAALLPAAQATPLPPLPTPLQQPVKPVKPKPLAVQAYF
VAVPGPCFAAEDADCEAGAPIATPDADCGAGAPIATPDSEFRGQRANRST
PGTVDYMNYVNFPSPDTVLLYKGVACLKVCIMQPGFNIDHFVVLPAADAP
PAAGPYGGVAVCFMQPGFNINHFVILQAADALPAAEPYGGVAPALPGVIT
GTLFDLGDNAMVAGVVPPNPPKASGYGVKASGYGVKVVPGPPGVRGDAPQ
VRTAACDTCPGGWAIEAAADGDFFSYTATLPKAGKYVVGANVGSASPLPK
GNRVVVMAGAGECIERAAPYNCNPALEATAAVALDAAFTSTGGFAVFEMF
MGDPIVLPAGDACLQLCALGAPVSVSNIDVWATYDPIKVTIPGVVEAENF
DIGGPGVTFFETTPDNNGGNIGYRPDAPSIDVEFGNNADKVMSNDADLNW
IDAGEWWRYTVMSNDADLNWIDAGEWWRYTVMAVTPQATYAAAMRAGRAA
PTPEPGPMARVLTVPGACAATKPLDCAAKYNYGPRAKPADPALLLDVVYP
DALAEGYYNYHSIVSGGDAVQMDAGPHCIQVCALQGDFHFDSLDLEQEEI
LATPAPTTPPAAAEPGSDGSGGSGGGAAADGSGGSTASSDLSTGAVVAIA
SASAAVGAVAVFGVTRLLALKGSKTVANNGVPEQQGMWPGDRASVLGATD
AIDLLLRGRYGALLEDAQAGKLQAWADGPDACLALILLLDQFSRHIYRDS
ADRDALVARCDALALPLAEGALDKGWQWRLSAAQHAFLLMPLRHARPPRR
ERLQRVLDEVAAREAREERGATEVLRRFRRATVRRLQERGAAEVLRRFRR
ATVRRLQAREECGGDAAEVLHRFRRATVRRLQVREQRGAAEVMRRFRRAT
VRRLQELQGASAPDGGDDILERAAFDADESDMHKNKLVRAVDAFARARGL
RAAPQPATATSGGGGGGKGKHTTHSSSSGASTATNGSAGGSGAAAGSGLG
TTSGSTGASGVAGGSIDAAAHNGGGNGASVHASGDAAAHNGSGGGSGSSG
SGGSSASGGSSSAANSIHGSVDAAVHDSGGGGSVRNGGGAHAAGSSTPVT
MAISLSGGVDSMVLAKILHHLQPAYGWRLVAVHIDYANRAESGKEADFVE
QCVHLDYANRVETGTEPTSCHSLSITFRKRVVSEVTRGVTDRAEYEAVSR
EAANASRMAVTDEDRRDARYAAYAEVLREFAPCPAILFGHHRGDVQENVV
SNVMRGCSLLKVAGMGEESINSGVKVWRPLLAFDKDAIFDFAHRYSVPYF
KDTTPLWSTRGKLRNGLVPLLKDMYGDGVLGHLSALAAGSDELASELRRE
LFQPFWDSVERCPMGASVDLMPYRGKGLYFWREALMVLLHSLGLPMALMV
LLHSMGLPMALMVLLHSMGLPMVSDRALITTLRRLGEPNAPPPSAAWWPL
RREYRCYCSEARIEGVLYILQPAAAPPEPYAVAAEGTEVEVSEPGPVVAA
DQLAAHKKGSRSSSSGRRRRRRGWLPELLPPPFADIRGFMSGAFSHTLPI
PTSPPHDLRVAPPPLLRERNAQRPDAAAQRRAEAPLPFPFRGMDPCLRAC
APLVSCARGQAALEGWGDAAGGGVRVVRVTYRYVGSAAASSADAAAGGDG
AAAAASGSAAAASGSAAAAATSSAAAAVSDSEAATAADSEAAAASGGAAA
AALAAAGHAV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011063TilS/TtcA_N
IPR010323DUF924
IPR014729Rossmann-like_a/b/a_fold
IPR012094tRNA_Ile_lys_synt
IPR012795tRNA_Ile_lys_synt_N
IPR011990TPR-like_helical_dom_sf