mRNA_12658 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A835YNS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS1_9STRA) HSP 1 Score: 907 bits (2345), Expect = 0.000e+0 Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 1
Query: 1 METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAAGVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 1317
METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAAGVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD
Sbjct: 1 METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAAGVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 439
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A835ZI44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI44_9STRA) HSP 1 Score: 411 bits (1056), Expect = 7.160e-137 Identity = 238/464 (51.29%), Postives = 282/464 (60.78%), Query Frame = 1
Query: 1 METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAA------------------GVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGY--SFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAA-----VQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 1317
M TRL EV EA S+ A A+ S SEAEG G + AVL NP LL +I++F+ CG WLYL VA SWRTAYMSVTA+R+G P VCVT A EAP RL M LACG+ + ++ V+ AAGASGS EV+RR+ LGM + +A GE +TL TW+ + DAYDG +Q AALIWLSQ RPWPVW+CT LC TAAE GQLAALKFL+ +D GQALFGPLI D S V+ GPEW Y SF + Y+ TLMDKAA GG VE L+WLRQEHALPFTP + AGC DV+ +C S RA++ P TP QMEWLRSLGGSW R+ T L L+ + + WLR E AEWP+L+ + D AE +V A +QGCPWG WTP C +VSRGRYSI K LH AGCPC CD
Sbjct: 38 MGTRLQEVMEAVSSDDA--RANAGSPSEAEGDGP-RGAVLANPQLLASIINFMKCGHWLYLTPVARSWRTAYMSVTAQREGAPSVCVTWGTAAVEAPERLAMALACGINVQRLTRAYFVQNAAGASGSMEVVRRLHGLGMPISDGALIGAARRTGVMNRLLALALGSGEQVTLSTWLFVGLCTFSDAYDG-EQRAALIWLSQQMRPWPVWFCTVLCHTAAEKGQLAALKFLIHEDYGQALFGPLIWDLSAVNMRGPEWTAGRHYLSSFSVDGGRYRPTLMDKAAAGGCVEALQWLRQEHALPFTPVXXXXXXXXXXXXXXXXXYQAGCQCDVDRVCQWSLRAIS--PSATPLQMEWLRSLGGSWRREDGTTMLRRLMGSGGTELSSIKDMIAWLRSEDAEWPQLS---EDIECHSDSSAELVVWATQQGCPWGDWTPECCALVSRGRYSIKKALHDAGCPCRCD 492
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A835YZ94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ94_9STRA) HSP 1 Score: 385 bits (988), Expect = 1.430e-126 Identity = 226/467 (48.39%), Postives = 279/467 (59.74%), Query Frame = 1
Query: 1 METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAA------------------------GVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAP-GYSFEH-NRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAA--VQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 1317
M RL EVTEAT S+ A A SRSE G G ++AVL NP LLE++LSFVG G LYL VA SWRTAYMSVTAR+QG WVCVT+ +AV E PARLEM LA G +PA S DV+ AAG SGS EVI R+RQLGM + +A E GE + QTW +L AYD +Q+A LIWLSQ RPWPVWYCT LC TAAENG+LA+LKFLM D GQ LFG L+ D SV+D + PE AP F+ V + T+M++AA GG+++V++WL E LP TP TM GCP+D+ +C SF+ TPSQMEWLRS+GGSWS + T AL L+ +T+ + WLR EGA WP+L+ + +D A A++ AA+QGCPWG WT C +S GRYSI +H A CPC+C+
Sbjct: 35 MGARLLEVTEATESDDA--RACAPSRSEVVGDGP-RRAVLANPQLLESVLSFVGRGHRLYLVPVARSWRTAYMSVTARQQGAAWVCVTSGSAVVETPARLEMALARGADVPALVKSCDVQRAAGTSGSMEVIHRLRQLGMVVSDGVVLQVLIGATCARRTGVLYRLPALALESGEQVDHQTWTYAGICVLRSAYDEEEQKAVLIWLSQQVRPWPVWYCTCLCHTAAENGRLASLKFLMHKDCGQVLFGSLVQDLSVIDFSSPERADAPTDLCFQFVGGVHHHVTVMNRAAAGGHIKVMQWLHHEQPLPVTPQTMSVXXXXXXXXXXXXXXQVGCPYDIAYICKLSFQE--GVARATPSQMEWLRSVGGSWSYEMVTAALYDLVGYCTSTSKEMIGWLRSEGAPWPQLSELAVAVG-AEDLNAAAVLWAAQQGCPWGDWTSECCDAMSHGRYSIKTAIHDARCPCQCE 495
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A836CDJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ7_9STRA) HSP 1 Score: 362 bits (928), Expect = 5.440e-119 Identity = 197/394 (50.00%), Postives = 237/394 (60.15%), Query Frame = 1
Query: 217 MSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGM--------SAAG------------VAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPG--YSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGV--TPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVVN---QFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 1317
M+ TAR+QGVPWVCVT+ +A E P R EM LACG+ +PA S D + AAGASGS EVIR + +LG+ SAA +A E + + TW+ + L D+Y+ QQ AALIWLSQ RP PVWYC+ LC TAAENGQLAALKFLM DD GQALFGPLIPD V+D PEW +AP Y + + TLM+KAA G+VEVL+WL QEHALPF T + AGCPHD+ +LC S D P + P QMEWLR +GGSWSR+ T AL L+ + WLR EGAEWP L + D CD+ A++ AA+QGCPWG WTP C VSRGRYSI + HAAGCPC+CD
Sbjct: 1 MAATARQQGVPWVCVTSGSAAVETPERQEMALACGISVPALTNSSDAQCAAGASGSMEVIRHLHRLGVPTSDAVLFSAARARRTGILYRFPVLARERNVQVKMSTWMAVYERFLSDSYNDEQQRAALIWLSQQVRPLPVWYCSSLCVTAAENGQLAALKFLMHDDHGQALFGPLIPDSLVIDFESPEWINAPACDYIQTNGTFSGRATLMEKAAASGHVEVLQWLHQEHALPFRSVTXXXXXXXXXXXXXXXXYEAGCPHDINELCDVSL----DNPMMKRAPPQMEWLRGIGGSWSREQVTEALSSLVGYRGAEKLISWLRSEGAEWPSLAQTLQGGYAADDCDEGEVGAVLWAAQQGCPWGDWTPRCCAQVSRGRYSIKEAPHAAGCPCQCD 390
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A836CP87_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP87_9STRA) HSP 1 Score: 322 bits (825), Expect = 5.040e-104 Identity = 185/419 (44.15%), Postives = 222/419 (52.98%), Query Frame = 1
Query: 157 VGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACG--VRLPARGGSFDVEEAAGASGSTEVIRRMRQLGM-------SAA------------GVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFE------------HNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCEC 1314
+G G WLYLA VA SWRTAYMS+ A+++GVPWVC T+ A E+P RLEM LACG V +P+ S +V +AAGASGS EV+RR+ LG+ SAA + E G+ +TL TW+ + IL AYD + +A L+WLSQ RPWPVWYCT LC TAA G+LAALKFLM DD GQALFGPLI D S VD + PEW AP F+ H TLMD AAVG VE+L+W RQE LPFT TM AA +G LAAL+WLH GCPHDV DLC +DF +A + AA+QGCPWG W C +S GRY+I K +HAAGCPC+C
Sbjct: 1 MGRGHWLYLAPVAQSWRTAYMSIMAQQEGVPWVCATSPPAAVESPQRLEMALACGITVHVPSLHYSCNVFDAAGASGSMEVVRRLHGLGLRVSCVLPSAARARRTGILYRLPALVQESGDEVTLHTWVLVQASILGAAYDDNELKAVLVWLSQQVRPWPVWYCTLLCHTAARKGRLAALKFLMHDDHGQALFGPLIRDLSAVDWSSPEWTKAPKQHFKWPSFAFDDEPEFHQYANALLTLMDAAAVGSRVEMLQWSRQEQGLPFTRLTMPCAAARGRLAALQWLHRMGCPHDVNDLCK------------------------------------------------------------------------EDFDVKAFLWAAQQGCPWGEWRSLSCDGLSDGRYTIKKAIHAAGCPCQC 347
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A835YUZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ6_9STRA) HSP 1 Score: 295 bits (754), Expect = 1.590e-92 Identity = 166/336 (49.40%), Postives = 211/336 (62.80%), Query Frame = 1
Query: 1 METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMS---AAGVAAECGEHM-----------------TLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLC 948
M RL EVT+A RS A R+ SEA GG + ++ VL +P LL +I+ F+GCG WL++A V+ SWRTAYMSVT R+Q VP VCVT A E P RLEM L G+ +P ++ +EAAGASGS EVI R+ LGM AA + A C H+ L+TW L ++ ++D Q+ AAL+WLS+ RPWPVW+CT+LC +AA G+ AALK+ M DRGQA++GPL+ D SVVD EWR AP +LMD+AA+GG+VEVL+WLRQEHALP TP TM AA G L AL+WLH AGCP+D+ LC
Sbjct: 57 MRKRLLEVTDAARSGDVW--AHARASSEAGGGEEPRRTVLASPDLLASIVDFMGCGHWLFVAPVSRSWRTAYMSVTERQQSVPCVCVTVGPAAVETPERLEMALEHGIDVPILTSTYSAQEAAGASGSMEVILRLCHLGMPISCAALLGAACARHIGTLYRLCTLAQRRNVLVRLETWTALHERVIHCSHDDEQRLAALVWLSRQVRPWPVWFCTYLCHSAANGGRQAALKYFMNKDRGQAVYGPLVRDLSVVDFGCLEWRDAPATFRWCLGSRPLLSLMDEAAIGGHVEVLQWLRQEHALPLTPLTMACAAGSGCLPALQWLHRAGCPYDIIQLC 390
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A836C9U7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U7_9STRA) HSP 1 Score: 301 bits (771), Expect = 7.750e-92 Identity = 192/442 (43.44%), Postives = 232/442 (52.49%), Query Frame = 1
Query: 1 METRLSEVTE-ATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAAGVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEHNRVGY--QFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGH--LAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCE 1311
M RL EVTE A RSE ASVRSRSE+EG AYMSVTARRQGVPWVCVT+ +A P RLE L G+R+ + + AAGASG G +C + W + +L DAY +Q+AALIWLSQ ARPWPVWYCT LC AA GQLAALKFL+ + GQALFG + D S ++ A EW A F G+ FTL DKAA GG+VEVL+WL QE +GH AAL+WLH AGCPHDV+ LC S R + + P MEWLR +GGSW R+ + AL+ L + ++WLRREGA+W +L + N D AL+ AA QGCPWG W P C +S GRY I K +H AGCPC+
Sbjct: 204 MGARLLEVTEEAARSEDV--RASVRSRSESEG---------------------------------------AYMSVTARRQGVPWVCVTSGSAAVALPQRLETALGSGIRVRPLTSAPAAQRAAGASGRY--------------GACPQCD----FRAWAAVEDGVLSDAYAEREQKAALIWLSQQARPWPVWYCTALCHKAALKGQLAALKFLLSEVCGQALFGAFLWDTSRLNWASREWASASWLDFVAVNQGHTGNFTLADKAAFGGHVEVLQWLHQE---------------RGHKRFAALRWLHRAGCPHDVDVLCELSLRNTPEHRCLNPQLMEWLRGIGGSWIREMVSDALIGSLGVRGSEDMIRWLRREGAQWLDLCYIANS----DTVDIGALLWAAGQGCPWGGWAPKFCVELSHGRYGIKKAVHEAGCPCQ 567
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A835ZEP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP5_9STRA) HSP 1 Score: 263 bits (673), Expect = 9.180e-81 Identity = 147/285 (51.58%), Postives = 175/285 (61.40%), Query Frame = 1
Query: 175 LYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAA------------------------GVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEHNRVG---YQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLC 948
L L VA SWRTAYMSVTAR+QG WVCVT+ +AV E PARLEM LA G +PA S DV+ AAG SGS EVI R+RQLGM + +A E GE + QTW +L AYD +Q+A LIWLSQ RPWPVWYCT LC AAENG+LAALKFLM DRGQ LFGP I D SVVD + PEW +AP + F + VG + FT+M+ AA GG++ V++WL E +LPFTP TM AA GCPHD+++LC
Sbjct: 40 LELVPVARSWRTAYMSVTARQQGAAWVCVTSGSAVVETPARLEMALARGADVPALVKSCDVQRAAGTSGSMEVIHRLRQLGMVVSDGVVLQVLIGATRARRTGVLYRLPALALESGEQVDHQTWTYAGICVLRSAYDEEEQKAVLIWLSQQVRPWPVWYCTRLCHIAAENGRLAALKFLMHKDRGQVLFGPFIQDLSVVDLSSPEWVNAPSF-FWYEFVGGVRHHFTVMNGAAAGGHISVMQWLHHEQSLPFTPQTMMTAAGHXXXXXXXXXXQKGCPHDIKNLC 323
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A835Z4J9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J9_9STRA) HSP 1 Score: 208 bits (529), Expect = 5.580e-62 Identity = 100/182 (54.95%), Postives = 125/182 (68.68%), Query Frame = 1
Query: 778 MDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFR-ALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVV-NQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 1317
MD+AA+ G VE+L+WLRQE LPFT TM AA +G AA++WLH AGCPHDV D+C S + + TP + QMEWLR +GGSWSR T AL ++ + WLR EGAEWP L V+ + +H +DF +ALV AA+QGCPWG WTPT C VSR RY+IIK +HAAGCPC+C+
Sbjct: 1 MDQAALAGRVEILQWLRQEQGLPFTHLTMPCAAARGRCAAVQWLHRAGCPHDVNDICEISLKYSYCMTPLLNLQQMEWLRGMGGSWSRDMVTAALAEMVGLQGAETIICWLRCEGAEWPTLGDVLLSPLEH-EDFDVKALVWAAQQGCPWGEWTPTDCDGVSRRRYTIIKAIHAAGCPCQCE 181
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A836CF46_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF46_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.110e-61 Identity = 98/184 (53.26%), Postives = 120/184 (65.22%), Query Frame = 1
Query: 778 MDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALL----HLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 1317
MD+AA GG +EV++WLR E +LPFTP TM AA GHL L+WLH GCPHD+ +C SF+ TPSQMEWLRS+GGSWS + THAL H F + WLR EGA WP+L+ V + D+ A A++ AA+QGCPWG WTP +C VS GRYSI K LH AGCPC+C+
Sbjct: 1 MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQE--GVARATPSQMEWLRSVGGSWSCEMVTHALFGLFGHDTPTFNLKQMISWLRSEGATWPQLSEVADAVG-ADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQCE 181 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12658 ID=mRNA_12658|Name=jgi.p|Trimin1|350518|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1346bp|location=Sequence derived from alignment at Contig_65:178929..180333- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGAAACACGACTTTCGGAGGTGACCGAAGCCACCAGGAGCGAGGGTGCback to top protein sequence of jgi.p|Trimin1|350518 >Trimin1|350518|estExt_Genemark1.C_Ctg_650028 ID=Trimin1|350518|estExt_Genemark1.C_Ctg_650028|Name=jgi.p|Trimin1|350518|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=440bp METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILback to top mRNA from alignment at Contig_65:178929..180333- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12658 ID=mRNA_12658|Name=jgi.p|Trimin1|350518|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1405bp|location=Sequence derived from alignment at Contig_65:178929..180333- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_65:178929..180333- >mRNA_12658 ID=mRNA_12658|Name=jgi.p|Trimin1|350518|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1320bp|location=Sequence derived from alignment at Contig_65:178929..180333- (Tribonema minus UTEX_B_3156 )back to top |