mRNA_12658 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350518
Unique NamemRNA_12658
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A835YNS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS1_9STRA)

HSP 1 Score: 907 bits (2345), Expect = 0.000e+0
Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 1
Query:    1 METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAAGVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 1317
            METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAAGVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD
Sbjct:    1 METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAAGVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 439          
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A835ZI44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI44_9STRA)

HSP 1 Score: 411 bits (1056), Expect = 7.160e-137
Identity = 238/464 (51.29%), Postives = 282/464 (60.78%), Query Frame = 1
Query:    1 METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAA------------------GVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGY--SFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAA-----VQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 1317
            M TRL EV EA  S+ A   A+  S SEAEG G  + AVL NP LL +I++F+ CG WLYL  VA SWRTAYMSVTA+R+G P VCVT   A  EAP RL M LACG+ +     ++ V+ AAGASGS EV+RR+  LGM  +                   +A   GE +TL TW+ +      DAYDG +Q AALIWLSQ  RPWPVW+CT LC TAAE GQLAALKFL+ +D GQALFGPLI D S V+  GPEW     Y  SF  +   Y+ TLMDKAA GG VE L+WLRQEHALPFTP                  + AGC  DV+ +C  S RA++  P  TP QMEWLRSLGGSW R+  T  L  L+       +     + WLR E AEWP+L+      +   D  AE +V A +QGCPWG WTP  C +VSRGRYSI K LH AGCPC CD
Sbjct:   38 MGTRLQEVMEAVSSDDA--RANAGSPSEAEGDGP-RGAVLANPQLLASIINFMKCGHWLYLTPVARSWRTAYMSVTAQREGAPSVCVTWGTAAVEAPERLAMALACGINVQRLTRAYFVQNAAGASGSMEVVRRLHGLGMPISDGALIGAARRTGVMNRLLALALGSGEQVTLSTWLFVGLCTFSDAYDG-EQRAALIWLSQQMRPWPVWFCTVLCHTAAEKGQLAALKFLIHEDYGQALFGPLIWDLSAVNMRGPEWTAGRHYLSSFSVDGGRYRPTLMDKAAAGGCVEALQWLRQEHALPFTPVXXXXXXXXXXXXXXXXXYQAGCQCDVDRVCQWSLRAIS--PSATPLQMEWLRSLGGSWRREDGTTMLRRLMGSGGTELSSIKDMIAWLRSEDAEWPQLS---EDIECHSDSSAELVVWATQQGCPWGDWTPECCALVSRGRYSIKKALHDAGCPCRCD 492          
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A835YZ94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ94_9STRA)

HSP 1 Score: 385 bits (988), Expect = 1.430e-126
Identity = 226/467 (48.39%), Postives = 279/467 (59.74%), Query Frame = 1
Query:    1 METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAA------------------------GVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAP-GYSFEH-NRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAA--VQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 1317
            M  RL EVTEAT S+ A   A   SRSE  G G  ++AVL NP LLE++LSFVG G  LYL  VA SWRTAYMSVTAR+QG  WVCVT+ +AV E PARLEM LA G  +PA   S DV+ AAG SGS EVI R+RQLGM  +                         +A E GE +  QTW      +L  AYD  +Q+A LIWLSQ  RPWPVWYCT LC TAAENG+LA+LKFLM  D GQ LFG L+ D SV+D + PE   AP    F+    V +  T+M++AA GG+++V++WL  E  LP TP TM                  GCP+D+  +C  SF+        TPSQMEWLRS+GGSWS +  T AL  L+    +T+   + WLR EGA WP+L+ +       +D  A A++ AA+QGCPWG WT   C  +S GRYSI   +H A CPC+C+
Sbjct:   35 MGARLLEVTEATESDDA--RACAPSRSEVVGDGP-RRAVLANPQLLESVLSFVGRGHRLYLVPVARSWRTAYMSVTARQQGAAWVCVTSGSAVVETPARLEMALARGADVPALVKSCDVQRAAGTSGSMEVIHRLRQLGMVVSDGVVLQVLIGATCARRTGVLYRLPALALESGEQVDHQTWTYAGICVLRSAYDEEEQKAVLIWLSQQVRPWPVWYCTCLCHTAAENGRLASLKFLMHKDCGQVLFGSLVQDLSVIDFSSPERADAPTDLCFQFVGGVHHHVTVMNRAAAGGHIKVMQWLHHEQPLPVTPQTMSVXXXXXXXXXXXXXXQVGCPYDIAYICKLSFQE--GVARATPSQMEWLRSVGGSWSYEMVTAALYDLVGYCTSTSKEMIGWLRSEGAPWPQLSELAVAVG-AEDLNAAAVLWAAQQGCPWGDWTSECCDAMSHGRYSIKTAIHDARCPCQCE 495          
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A836CDJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ7_9STRA)

HSP 1 Score: 362 bits (928), Expect = 5.440e-119
Identity = 197/394 (50.00%), Postives = 237/394 (60.15%), Query Frame = 1
Query:  217 MSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGM--------SAAG------------VAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPG--YSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGV--TPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVVN---QFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 1317
            M+ TAR+QGVPWVCVT+ +A  E P R EM LACG+ +PA   S D + AAGASGS EVIR + +LG+        SAA             +A E    + + TW+ +    L D+Y+  QQ AALIWLSQ  RP PVWYC+ LC TAAENGQLAALKFLM DD GQALFGPLIPD  V+D   PEW +AP   Y   +     + TLM+KAA  G+VEVL+WL QEHALPF   T                + AGCPHD+ +LC  S     D P +   P QMEWLR +GGSWSR+  T AL  L+        + WLR EGAEWP L   +      D CD+    A++ AA+QGCPWG WTP  C  VSRGRYSI +  HAAGCPC+CD
Sbjct:    1 MAATARQQGVPWVCVTSGSAAVETPERQEMALACGISVPALTNSSDAQCAAGASGSMEVIRHLHRLGVPTSDAVLFSAARARRTGILYRFPVLARERNVQVKMSTWMAVYERFLSDSYNDEQQRAALIWLSQQVRPLPVWYCSSLCVTAAENGQLAALKFLMHDDHGQALFGPLIPDSLVIDFESPEWINAPACDYIQTNGTFSGRATLMEKAAASGHVEVLQWLHQEHALPFRSVTXXXXXXXXXXXXXXXXYEAGCPHDINELCDVSL----DNPMMKRAPPQMEWLRGIGGSWSREQVTEALSSLVGYRGAEKLISWLRSEGAEWPSLAQTLQGGYAADDCDEGEVGAVLWAAQQGCPWGDWTPRCCAQVSRGRYSIKEAPHAAGCPCQCD 390          
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A836CP87_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP87_9STRA)

HSP 1 Score: 322 bits (825), Expect = 5.040e-104
Identity = 185/419 (44.15%), Postives = 222/419 (52.98%), Query Frame = 1
Query:  157 VGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACG--VRLPARGGSFDVEEAAGASGSTEVIRRMRQLGM-------SAA------------GVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFE------------HNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCEC 1314
            +G G WLYLA VA SWRTAYMS+ A+++GVPWVC T+  A  E+P RLEM LACG  V +P+   S +V +AAGASGS EV+RR+  LG+       SAA             +  E G+ +TL TW+ +   IL  AYD  + +A L+WLSQ  RPWPVWYCT LC TAA  G+LAALKFLM DD GQALFGPLI D S VD + PEW  AP   F+            H       TLMD AAVG  VE+L+W RQE  LPFT  TM  AA +G LAAL+WLH  GCPHDV DLC                                                                         +DF  +A + AA+QGCPWG W    C  +S GRY+I K +HAAGCPC+C
Sbjct:    1 MGRGHWLYLAPVAQSWRTAYMSIMAQQEGVPWVCATSPPAAVESPQRLEMALACGITVHVPSLHYSCNVFDAAGASGSMEVVRRLHGLGLRVSCVLPSAARARRTGILYRLPALVQESGDEVTLHTWVLVQASILGAAYDDNELKAVLVWLSQQVRPWPVWYCTLLCHTAARKGRLAALKFLMHDDHGQALFGPLIRDLSAVDWSSPEWTKAPKQHFKWPSFAFDDEPEFHQYANALLTLMDAAAVGSRVEMLQWSRQEQGLPFTRLTMPCAAARGRLAALQWLHRMGCPHDVNDLCK------------------------------------------------------------------------EDFDVKAFLWAAQQGCPWGEWRSLSCDGLSDGRYTIKKAIHAAGCPCQC 347          
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A835YUZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ6_9STRA)

HSP 1 Score: 295 bits (754), Expect = 1.590e-92
Identity = 166/336 (49.40%), Postives = 211/336 (62.80%), Query Frame = 1
Query:    1 METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMS---AAGVAAECGEHM-----------------TLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLC 948
            M  RL EVT+A RS      A  R+ SEA GG + ++ VL +P LL +I+ F+GCG WL++A V+ SWRTAYMSVT R+Q VP VCVT   A  E P RLEM L  G+ +P    ++  +EAAGASGS EVI R+  LGM    AA + A C  H+                  L+TW  L   ++  ++D  Q+ AAL+WLS+  RPWPVW+CT+LC +AA  G+ AALK+ M  DRGQA++GPL+ D SVVD    EWR AP             +LMD+AA+GG+VEVL+WLRQEHALP TP TM  AA  G L AL+WLH AGCP+D+  LC
Sbjct:   57 MRKRLLEVTDAARSGDVW--AHARASSEAGGGEEPRRTVLASPDLLASIVDFMGCGHWLFVAPVSRSWRTAYMSVTERQQSVPCVCVTVGPAAVETPERLEMALEHGIDVPILTSTYSAQEAAGASGSMEVILRLCHLGMPISCAALLGAACARHIGTLYRLCTLAQRRNVLVRLETWTALHERVIHCSHDDEQRLAALVWLSRQVRPWPVWFCTYLCHSAANGGRQAALKYFMNKDRGQAVYGPLVRDLSVVDFGCLEWRDAPATFRWCLGSRPLLSLMDEAAIGGHVEVLQWLRQEHALPLTPLTMACAAGSGCLPALQWLHRAGCPYDIIQLC 390          
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A836C9U7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U7_9STRA)

HSP 1 Score: 301 bits (771), Expect = 7.750e-92
Identity = 192/442 (43.44%), Postives = 232/442 (52.49%), Query Frame = 1
Query:    1 METRLSEVTE-ATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAILSFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAAGVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEHNRVGY--QFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGH--LAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCE 1311
            M  RL EVTE A RSE     ASVRSRSE+EG                                       AYMSVTARRQGVPWVCVT+ +A    P RLE  L  G+R+     +   + AAGASG                G   +C      + W  +   +L DAY   +Q+AALIWLSQ ARPWPVWYCT LC  AA  GQLAALKFL+ +  GQALFG  + D S ++ A  EW  A    F     G+   FTL DKAA GG+VEVL+WL QE               +GH   AAL+WLH AGCPHDV+ LC  S R   +   + P  MEWLR +GGSW R+  + AL+  L    +   ++WLRREGA+W +L  + N     D     AL+ AA QGCPWG W P  C  +S GRY I K +H AGCPC+
Sbjct:  204 MGARLLEVTEEAARSEDV--RASVRSRSESEG---------------------------------------AYMSVTARRQGVPWVCVTSGSAAVALPQRLETALGSGIRVRPLTSAPAAQRAAGASGRY--------------GACPQCD----FRAWAAVEDGVLSDAYAEREQKAALIWLSQQARPWPVWYCTALCHKAALKGQLAALKFLLSEVCGQALFGAFLWDTSRLNWASREWASASWLDFVAVNQGHTGNFTLADKAAFGGHVEVLQWLHQE---------------RGHKRFAALRWLHRAGCPHDVDVLCELSLRNTPEHRCLNPQLMEWLRGIGGSWIREMVSDALIGSLGVRGSEDMIRWLRREGAQWLDLCYIANS----DTVDIGALLWAAGQGCPWGGWAPKFCVELSHGRYGIKKAVHEAGCPCQ 567          
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A835ZEP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP5_9STRA)

HSP 1 Score: 263 bits (673), Expect = 9.180e-81
Identity = 147/285 (51.58%), Postives = 175/285 (61.40%), Query Frame = 1
Query:  175 LYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAA------------------------GVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEHNRVG---YQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLC 948
            L L  VA SWRTAYMSVTAR+QG  WVCVT+ +AV E PARLEM LA G  +PA   S DV+ AAG SGS EVI R+RQLGM  +                         +A E GE +  QTW      +L  AYD  +Q+A LIWLSQ  RPWPVWYCT LC  AAENG+LAALKFLM  DRGQ LFGP I D SVVD + PEW +AP + F +  VG   + FT+M+ AA GG++ V++WL  E +LPFTP TM  AA              GCPHD+++LC
Sbjct:   40 LELVPVARSWRTAYMSVTARQQGAAWVCVTSGSAVVETPARLEMALARGADVPALVKSCDVQRAAGTSGSMEVIHRLRQLGMVVSDGVVLQVLIGATRARRTGVLYRLPALALESGEQVDHQTWTYAGICVLRSAYDEEEQKAVLIWLSQQVRPWPVWYCTRLCHIAAENGRLAALKFLMHKDRGQVLFGPFIQDLSVVDLSSPEWVNAPSF-FWYEFVGGVRHHFTVMNGAAAGGHISVMQWLHHEQSLPFTPQTMMTAAGHXXXXXXXXXXQKGCPHDIKNLC 323          
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A835Z4J9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J9_9STRA)

HSP 1 Score: 208 bits (529), Expect = 5.580e-62
Identity = 100/182 (54.95%), Postives = 125/182 (68.68%), Query Frame = 1
Query:  778 MDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFR-ALADTPGVTPSQMEWLRSLGGSWSRQTATHALLHLLRDFRNTAAVQWLRREGAEWPELNTVV-NQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 1317
            MD+AA+ G VE+L+WLRQE  LPFT  TM  AA +G  AA++WLH AGCPHDV D+C  S + +   TP +   QMEWLR +GGSWSR   T AL  ++        + WLR EGAEWP L  V+ +  +H +DF  +ALV AA+QGCPWG WTPT C  VSR RY+IIK +HAAGCPC+C+
Sbjct:    1 MDQAALAGRVEILQWLRQEQGLPFTHLTMPCAAARGRCAAVQWLHRAGCPHDVNDICEISLKYSYCMTPLLNLQQMEWLRGMGGSWSRDMVTAALAEMVGLQGAETIICWLRCEGAEWPTLGDVLLSPLEH-EDFDVKALVWAAQQGCPWGEWTPTDCDGVSRRRYTIIKAIHAAGCPCQCE 181          
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Match: A0A836CF46_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF46_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.110e-61
Identity = 98/184 (53.26%), Postives = 120/184 (65.22%), Query Frame = 1
Query:  778 MDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALL----HLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 1317
            MD+AA GG +EV++WLR E +LPFTP TM  AA  GHL  L+WLH  GCPHD+  +C  SF+        TPSQMEWLRS+GGSWS +  THAL     H    F     + WLR EGA WP+L+ V +     D+  A A++ AA+QGCPWG WTP +C  VS GRYSI K LH AGCPC+C+
Sbjct:    1 MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQE--GVARATPSQMEWLRSVGGSWSCEMVTHALFGLFGHDTPTFNLKQMISWLRSEGATWPQLSEVADAVG-ADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQCE 181          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350518 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A835YNS1_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZI44_9STRA7.160e-13751.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ94_9STRA1.430e-12648.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDJ7_9STRA5.440e-11950.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CP87_9STRA5.040e-10444.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUZ6_9STRA1.590e-9249.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C9U7_9STRA7.750e-9243.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEP5_9STRA9.180e-8151.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z4J9_9STRA5.580e-6254.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CF46_9STRA1.110e-6153.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_65contigContig_65:178929..180333 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350518|estExt_Genemark1.C_Ctg_650028
Hectar predicted targeting categoryother localisation
TranscriptId350840
TrackFilteredModels1
ProteinId350518
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350518gene_12658Tribonema minus UTEX_B_3156 geneContig_65 178929..180333 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12658_2exon_12658_2Tribonema minus UTEX_B_3156 exonContig_65 178929..179851 -
exon_12658_1exon_12658_1Tribonema minus UTEX_B_3156 exonContig_65 179911..180333 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_12658UTR3_12658Tribonema minus UTEX_B_3156 three_prime_UTRContig_65 178929..178954 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12658CDS_12658Tribonema minus UTEX_B_3156 CDSContig_65 179911..180333 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350518Trimin1|350518|estExt_Genemark1.C_Ctg_650028Tribonema minus UTEX_B_3156 polypeptideContig_65 178955..180333 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12658 ID=mRNA_12658|Name=jgi.p|Trimin1|350518|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1346bp|location=Sequence derived from alignment at Contig_65:178929..180333- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAAACACGACTTTCGGAGGTGACCGAAGCCACCAGGAGCGAGGGTGC
CGGCCCCAGCGCGAGTGTCCGCTCCCGCAGCGAAGCCGAGGGCGGCGGCG
ACGGGCAACAGGCGGTACTGACGAACCCCCCGCTGCTGGAGGCGATACTC
AGCTTTGTGGGGTGCGGACAGTGGCTCTACCTGGCGTCGGTGGCGCACTC
CTGGCGCACGGCGTACATGTCCGTCACGGCGCGGCGGCAGGGCGTGCCGT
GGGTGTGCGTGACGGCGGCTGCAGCCGTGGCGGAGGCGCCGGCGCGGCTG
GAGATGGGGCTGGCGTGCGGCGTTCGCCTGCCGGCGCGCGGAGGCTCCTT
TGACGTGGAAGAGGCGGCCGGCGCATCGGGGTCCACGGAGGTCATACGGC
GCATGCGCCAGCTCGGCATGTCGGCTGCCGGCGTGGCGGCGGAGTGCGGC
GAGCACATGACGCTCCAGACGTGGATAGATCTCGTGCCGCATATTCTCTG
CGACGCATACGACGGCGCGCAGCAGGAGGCAGCGCTCATCTGGCTGTCGC
AGCACGCGCGGCCGTGGCCGGTGTGGTACTGCACCCACCTGTGCTTCACC
GCAGCGGAGAACGGCCAGCTGGCGGCGCTCAAGTTTCTCATGCGCGATGA
CCGCGGGCAGGCGCTGTTCGGCCCGCTCATACCGGATCCGTCGGTCGTAG
ACACCGCTGGCCCCGAGTGGAGGCATGCACCAGGCTATAGCTTTGAACAC
AATCGTGTAGGCTACCAATTCACACTGATGGACAAGGCTGCGGTAGGCGG
CAACGTGGAGGTCTTGCGTTGGCTGCGTCAGGAACATGCACTGCCCTTCA
CGCCTTTCACCATGAGATTCGCAGCCGAGAAAGGGCACTTGGCCGCGCTC
AAGTGGCTGCACGCAGCAGGCTGCCCGCATGACGTGGAGGACCTCTGCGC
GCGGAGCTTCAGAGCTCTTGCGGACACGCCTGGCGTGACGCCGTCGCAGA
TGGAGTGGCTCAGAAGCCTGGGGGGCAGTTGGAGTCGCCAGACGGCGACA
CATGCTTTGCTCCACCTACTGAGGGACTTCCGAAACACCGCGGCGGTTCA
GTGGCTGCGCCGCGAAGGCGCGGAGTGGCCAGAGCTCAACACTGTAGTGA
ATCAGTTTGATCACTGTGATGACTTTGTTGCGGAAGCTCTTGTAGACGCG
GCGCGCCAGGGCTGCCCCTGGGGCCGGTGGACACCGACCCACTGTAGAAT
TGTGTCGCGCGGGCGGTACAGCATTATCAAGCCGCTTCACGCCGCCGGCT
GCCCATGCGAGTGCGACTGAGGAGAGTGTGTACATGCACATCATGC
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protein sequence of jgi.p|Trimin1|350518

>Trimin1|350518|estExt_Genemark1.C_Ctg_650028 ID=Trimin1|350518|estExt_Genemark1.C_Ctg_650028|Name=jgi.p|Trimin1|350518|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=440bp
METRLSEVTEATRSEGAGPSASVRSRSEAEGGGDGQQAVLTNPPLLEAIL
SFVGCGQWLYLASVAHSWRTAYMSVTARRQGVPWVCVTAAAAVAEAPARL
EMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAAGVAAECG
EHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFT
AAENGQLAALKFLMRDDRGQALFGPLIPDPSVVDTAGPEWRHAPGYSFEH
NRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAAL
KWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTAT
HALLHLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDA
ARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD*
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mRNA from alignment at Contig_65:178929..180333-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12658 ID=mRNA_12658|Name=jgi.p|Trimin1|350518|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1405bp|location=Sequence derived from alignment at Contig_65:178929..180333- (Tribonema minus UTEX_B_3156 )
ATGGAAACACGACTTTCGGAGGTGACCGAAGCCACCAGGAGCGAGGGTGC CGGCCCCAGCGCGAGTGTCCGCTCCCGCAGCGAAGCCGAGGGCGGCGGCG ACGGGCAACAGGCGGTACTGACGAACCCCCCGCTGCTGGAGGCGATACTC AGCTTTGTGGGGTGCGGACAGTGGCTCTACCTGGCGTCGGTGGCGCACTC CTGGCGCACGGCGTACATGTCCGTCACGGCGCGGCGGCAGGGCGTGCCGT GGGTGTGCGTGACGGCGGCTGCAGCCGTGGCGGAGGCGCCGGCGCGGCTG GAGATGGGGCTGGCGTGCGGCGTTCGCCTGCCGGCGCGCGGAGGCTCCTT TGACGTGGAAGAGGCGGCCGGCGCATCGGGGTCCACGGAGGTCATACGGC GCATGCGCCAGCTCGGCATGTCGGTTACGAGGGACGCGCTCTTCGGCGCC GCACGCGCGCGGCGCTTGGACTTTCTCTACAGGCTGCCGGCGTGGCGGCG GAGTGCGGCGAGCACATGACGCTCCAGACGTGGATAGATCTCGTGCCGCA TATTCTCTGCGACGCATACGACGGCGCGCAGCAGGAGGCAGCGCTCATCT GGCTGTCGCAGCACGCGCGGCCGTGGCCGGTGTGGTACTGCACCCACCTG TGCTTCACCGCAGCGGAGAACGGCCAGCTGGCGGCGCTCAAGTTTCTCAT GCGCGATGACCGCGGGCAGGCGCTGTTCGGCCCGCTCATACCGGATCCGT CGGTCGTAGACACCGCTGGCCCCGAGTGGAGGCATGCACCAGGCTATAGC TTTGAACACAATCGTGTAGGCTACCAATTCACACTGATGGACAAGGCTGC GGTAGGCGGCAACGTGGAGGTCTTGCGTTGGCTGCGTCAGGAACATGCAC TGCCCTTCACGCCTTTCACCATGAGATTCGCAGCCGAGAAAGGGCACTTG GCCGCGCTCAAGTGGCTGCACGCAGCAGGCTGCCCGCATGACGTGGAGGA CCTCTGCGCGCGGAGCTTCAGAGCTCTTGCGGACACGCCTGGCGTGACGC CGTCGCAGATGGAGTGGCTCAGAAGCCTGGGGGGCAGTTGGAGTCGCCAG ACGGCGACACATGCTTTGCTCCACCTACTGAGGGACTTCCGAAACACCGC GGCGGTTCAGTGGCTGCGCCGCGAAGGCGCGGAGTGGCCAGAGCTCAACA CTGTAGTGAATCAGTTTGATCACTGTGATGACTTTGTTGCGGAAGCTCTT GTAGACGCGGCGCGCCAGGGCTGCCCCTGGGGCCGGTGGACACCGACCCA CTGTAGAATTGTGTCGCGCGGGCGGTACAGCATTATCAAGCCGCTTCACG CCGCCGGCTGCCCATGCGAGTGCGACTGAGGAGAGTGTGTACATGCACAT CATGC
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Coding sequence (CDS) from alignment at Contig_65:178929..180333-

>mRNA_12658 ID=mRNA_12658|Name=jgi.p|Trimin1|350518|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1320bp|location=Sequence derived from alignment at Contig_65:178929..180333- (Tribonema minus UTEX_B_3156 )
ATGGAAACACGACTTTCGGAGGTGACCGAAGCCACCAGGAGCGAGGGTGC
CGGCCCCAGCGCGAGTGTCCGCTCCCGCAGCGAAGCCGAGGGCGGCGGCG
ACGGGCAACAGGCGGTACTGACGAACCCCCCGCTGCTGGAGGCGATACTC
AGCTTTGTGGGGTGCGGACAGTGGCTCTACCTGGCGTCGGTGGCGCACTC
CTGGCGCACGGCGTACATGTCCGTCACGGCGCGGCGGCAGGGCGTGCCGT
GGGTGTGCGTGACGGCGGCTGCAGCCGTGGCGGAGGCGCCGGCGCGGCTG
GAGATGGGGCTGGCGTGCGGCGTTCGCCTGCCGGCGCGCGGAGGCTCCTT
TGACGTGGAAGAGGCGGCCGGCGCATCGGGGTCCACGGAGGTCATACGGC
GCATGCGCCAGCTCGGCATGTCGGCTGCCGGCGTGGCGGCGGAGTGCGGC
GAGCACATGACGCTCCAGACGTGGATAGATCTCGTGCCGCATATTCTCTG
CGACGCATACGACGGCGCGCAGCAGGAGGCAGCGCTCATCTGGCTGTCGC
AGCACGCGCGGCCGTGGCCGGTGTGGTACTGCACCCACCTGTGCTTCACC
GCAGCGGAGAACGGCCAGCTGGCGGCGCTCAAGTTTCTCATGCGCGATGA
CCGCGGGCAGGCGCTGTTCGGCCCGCTCATACCGGATCCGTCGGTCGTAG
ACACCGCTGGCCCCGAGTGGAGGCATGCACCAGGCTATAGCTTTGAACAC
AATCGTGTAGGCTACCAATTCACACTGATGGACAAGGCTGCGGTAGGCGG
CAACGTGGAGGTCTTGCGTTGGCTGCGTCAGGAACATGCACTGCCCTTCA
CGCCTTTCACCATGAGATTCGCAGCCGAGAAAGGGCACTTGGCCGCGCTC
AAGTGGCTGCACGCAGCAGGCTGCCCGCATGACGTGGAGGACCTCTGCGC
GCGGAGCTTCAGAGCTCTTGCGGACACGCCTGGCGTGACGCCGTCGCAGA
TGGAGTGGCTCAGAAGCCTGGGGGGCAGTTGGAGTCGCCAGACGGCGACA
CATGCTTTGCTCCACCTACTGAGGGACTTCCGAAACACCGCGGCGGTTCA
GTGGCTGCGCCGCGAAGGCGCGGAGTGGCCAGAGCTCAACACTGTAGTGA
ATCAGTTTGATCACTGTGATGACTTTGTTGCGGAAGCTCTTGTAGACGCG
GCGCGCCAGGGCTGCCCCTGGGGCCGGTGGACACCGACCCACTGTAGAAT
TGTGTCGCGCGGGCGGTACAGCATTATCAAGCCGCTTCACGCCGCCGGCT
GCCCATGCGAGTGCGACTGA
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