Trimin1|350511|estExt_Genemark1.C_Ctg_650014 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350511
Unique NameTrimin1|350511|estExt_Genemark1.C_Ctg_650014
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length247
Homology
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A835YVI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVI8_9STRA)

HSP 1 Score: 494 bits (1273), Expect = 6.730e-177
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
Query:    1 MGSQKGGRTLLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFPSQ 246
            MGSQKGGRTLLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFPSQ
Sbjct:    1 MGSQKGGRTLLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFPSQ 246          
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: D8LAU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAU5_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 7.200e-56
Identity = 96/240 (40.00%), Postives = 149/240 (62.08%), Query Frame = 0
Query:    5 KGGRTLLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFP 244
            +G +  LD++V + +  + +DK +K  GY+ S++A ++R  NGGK T  +EGL++LYG +   R + R  GT +A+  +++ S    W D RIR L + QA T + YHPME V     I PKL P++  WW+A++ + W+A+ + D+Y+++LK +EL+R +     +L   A+ E  A  + A++   A +R V LQ  R +FYLPNA+HW+F+KP +    VAALGL EA VG  Q FP
Sbjct:    7 EGAKDFLDRFVTFVAGTYRNDKCIKLLGYSLSTIAQIIRYRNGGKDTRRSEGLNQLYGALSTARVIFRMQGTAEAVWELKHLSGADGWDDVRIRPLARLQALTNVFYHPMEEVALAGGIAPKLFPVDQAWWWARSDWAWLAFCIIDMYMNVLKGRELRRREEGVRRKLRDCAESET-AGLRQALSQIAASKRQVALQQLRMVFYLPNAVHWAFIKPPVHPLVVAALGLGEAAVGAVQAFP 245          
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A067DAU4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067DAU4_SAPPC)

HSP 1 Score: 152 bits (383), Expect = 7.160e-42
Identity = 81/235 (34.47%), Postives = 134/235 (57.02%), Query Frame = 0
Query:   10 LLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFP 244
            L+   V YTSA    DKV K+ G+ C++LA V+      K T  + GL  +  ++   R +TRF G  + +EA++NDSW     D R+R LVK Q ++ML+Y+P+EHV ++ ++ PK   ++      ++C  W  YVV D+Y + L+  +L + +     ++   AD +A A     +A  Q+ R+ + +  WR + +LPN IHWS  + ++P+  V  LG AE ++G+ QT+P
Sbjct:    5 LVKTVVKYTSATSKADKVSKSIGFGCATLARVIEFY-AAKPTRHSVGLGAVASQISYARYVTRFTGIFECIEALQNDSWTYADDDPRVRQLVKLQVYSMLLYYPLEHVSFVGFVAPKWFNVDAMRAMRQSCMAWTVYVVLDMYANHLRLNKLAKREKMLEAKIIDEADPDAVAERATELATIQSTRQYLIINQWRNVLFLPNCIHWSSERGIIPEVLVQFLGFAEGVLGIWQTWP 238          
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A1V9ZTM9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTM9_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.100e-40
Identity = 83/234 (35.47%), Postives = 133/234 (56.84%), Query Frame = 0
Query:   10 LLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTF 243
            L  K VGY S     DKV K+ GY  ++LA V+  L   + T  ++GL  +  +V   R +TRF G  + ++A++NDSW     D  +R +VK Q ++ML+Y+P+EHV ++ ++ PKL+ ++   +  ++C  W  YVV DLY +  + + L + + A   +     D EA A   A +A  +A RR + L  WR + +LPN IHWS  + ++P+  V  L  AE I+G+ QT+
Sbjct:    5 LASKIVGYASTTSKADKVSKSIGYGLATLARVIE-LYAARPTRQSQGLGAVASQVSFARYVTRFTGVFECIDALQNDSWNYADDDPVVRQVVKAQIYSMLLYYPLEHVSFVGFVAPKLLNVDAMRYCRQSCMAWTVYVVLDLYANNRRLEALAKKEKALEAKTIDETDPEAVAERAAGLATIKATRRSLVLTQWRNVLFLPNCIHWSTERGIMPEVLVQFLAFAEGILGIYQTW 237          
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A8K1CIT4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIT4_PYTOL)

HSP 1 Score: 143 bits (360), Expect = 1.670e-38
Identity = 76/233 (32.62%), Postives = 130/233 (55.79%), Query Frame = 0
Query:   11 LDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTF 243
            ++K+V Y+S     DK  KT GY   S+  +L +     S T T GL +L   + M R + RF G  ++ EAI+N+SW     D+ ++ +VK+QA++ML+Y+P+EHV Y+ Y+ PKL+ ++ +W+  ++C+ W AYV  DLY + L+   L + +       +   D++     Q   +  + +  +  LQ+  A F+ P  +HWS  + ++P+  V  L  AEAI G  +T+
Sbjct:    3 IEKFVRYSSGTLRSDKFAKTIGYGAGSIGHLLALAAKEDSDTST-GLKQLSSSISMARYVIRFTGALESYEAIKNNSWCYGDDDKHLQQIVKYQAYSMLVYYPLEHVSYIGYVAPKLLKIDANWFMRQSCWAWTAYVALDLYANQLRIMNLNKREKKLLADKDMPVDEKL----QELASLRKRRTELYYLQLRNACFF-PTCLHWSLERGLIPEPLVQFLCFAEAITGFWRTW 229          
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A2D4BSI6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSI6_PYTIN)

HSP 1 Score: 137 bits (346), Expect = 2.050e-36
Identity = 74/235 (31.49%), Postives = 130/235 (55.32%), Query Frame = 0
Query:   11 LDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRR--IVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTF 243
            L+K+V Y+S     DK  KT GY C S+  +L +    K + ++ GL ++   + M R + RF G  ++ +A++N SW     D+ I+++V+ QA++MLIY+P+EH+ Y+ Y+ PKL+ ++ +W+  ++C+ W AYV  D+Y + L+  +L + +       +   ++  R         N  KRR  +  LQ+  A F+ P  +HWS  +  +P+  V  L   EAI G  +T+
Sbjct:    3 LEKFVRYSSGTLRTDKFAKTIGYGCGSIGHLLAIA-AQKDSDVSTGLKQISSNISMARYVIRFTGAFESYDALKNGSWCYGDDDKHIQSIVRLQAYSMLIYYPLEHISYVGYVAPKLIKMDANWFMRQSCWAWTAYVALDVYANQLRILKLNKREKELLANKDMPEEERKRELT------NIRKRRTELYFLQLRNACFF-PTCLHWSLERGCIPEPLVQFLCFIEAITGFWRTW 229          
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A024G3J3_9STRA (Uncharacterized protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G3J3_9STRA)

HSP 1 Score: 108 bits (269), Expect = 6.230e-25
Identity = 66/215 (30.70%), Postives = 109/215 (50.70%), Query Frame = 0
Query:   25 DKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGL 239
            DK+ KT GY   SL  VL          + +GL KL   + + R +TR  GT  + +A R  SW  D  D   R + K QA+TM++Y+P+EHV Y+ ++ PKL+ ++      ++C  W+ Y++ D+Y +  + ++L   + +    + + +DD  R      +   +++    +L   R    LP  +HWS  + VLP+  V  L   EA VGL
Sbjct:   19 DKIYKTIGYGSGSLGHVLSHFRA--DPDIVDGLKKLSSAISLARYVTRVTGTFQSYDAFRCVSWALDDDDSLNRLIAKVQAFTMMLYYPLEHVSYIGFMAPKLIQIDAGKISRQSCIAWLMYIILDMYANQRRIRKLALEECS----ILEGSDDTDRKKKLPEIRTRKSELHYTQL---RNACLLPTCLHWSIHEGVLPESVVQYLCCLEACVGL 224          
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: F0WKH0_9STRA (Uncharacterized protein AlNc14C133G7021 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WKH0_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.170e-23
Identity = 65/215 (30.23%), Postives = 110/215 (51.16%), Query Frame = 0
Query:   25 DKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGL 239
            DK+ KT GY   SL  +L   +      + +GL KL   +   R +TR  GT ++ +A+R+ SW  D  D   R + K QA+TM++Y+P+EHV Y+  + PKL+ ++   +  ++   W+ +++ D+Y +  + ++L   + +    LE   D + +   +  V     KR    +Q+  A F LP  +HWS    VL +  V  L   EA +GL
Sbjct:   19 DKIYKTIGYGSGSLGHMLS--HSRIDPDIVDGLKKLSSAISFARYVTRITGTFESYDALRSGSWASDDDDSLNRLIAKAQAFTMMLYYPLEHVSYIGLMAPKLIQIDAGKYSRQSSIAWLVFIILDIYANQRRIRKLALEELSI---LEACGDADCK---KKLVDIRTRKREFCYVQLRNACF-LPTCLHWSIHGGVLRESLVQYLCCLEACIGL 224          
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A0P1B951_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B951_PLAHL)

HSP 1 Score: 100 bits (249), Expect = 4.390e-22
Identity = 59/214 (27.57%), Postives = 106/214 (49.53%), Query Frame = 0
Query:   11 LDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPK 224
            +DK+  ++S     DK  KT GY   ++  ++      K T  ++G   +   + M R + RF G  ++  A +NDSW        I+ +V+ QA +M+IY+P+EH+ Y+ ++ PKL+ ++      ++C  W  Y++ D+Y + ++F  L   +     Q++    DE RA    ++   Q +RR +     R   +     HWSF K  LP+
Sbjct:   12 VDKFARFSSRTIDADKFYKTIGYGLGAVGHLMAHTMQ-KETETSKGFQAIASNISMARYVIRFTGGVESFAAWKNDSWCYGDDSEHIKQVVRLQALSMIIYYPLEHISYIGFVAPKLLDIDAMKVSRQSCQAWGIYIILDVYANAIRFLTLTSKEKQIKEQMD--LSDEERATLLTSI---QLRRRELYYVQLRNFLFAGPCFHWSFQKSFLPE 219          
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: M4BUC1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUC1_HYAAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.040e-16
Identity = 46/147 (31.29%), Postives = 78/147 (53.06%), Query Frame = 0
Query:   11 LDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLK 157
            +DK V ++S+    DK+ KT  Y   + AA        + T   + +  L   + M R + RF G  +A  A++  SW     D  ++ LV+ QA +M++YHP+EHV Y+ ++ PKL+ ++   +   +C  W  YV+ D+Y S L+
Sbjct:    7 VDKLVRFSSSSIGADKLYKTLAYGLDA-AAYFFAPTAQQETA--QNIHALASNISMARYVLRFTGGLEAYTALKKGSWSCKDDDEHVQRLVRLQALSMVVYHPLEHVSYVGFVAPKLLKVDAMHFSRLSCRAWGVYVLLDIYASALR 150          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A835YVI8_9STRA6.730e-177100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LAU5_ECTSI7.200e-5640.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A067DAU4_SAPPC7.160e-4234.47Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZTM9_9STRA1.100e-4035.47Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A8K1CIT4_PYTOL1.670e-3832.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BSI6_PYTIN2.050e-3631.49Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A024G3J3_9STRA6.230e-2530.70Uncharacterized protein n=3 Tax=Albugo candida Tax... [more]
F0WKH0_9STRA2.170e-2330.23Uncharacterized protein AlNc14C133G7021 n=1 Tax=Al... [more]
A0A0P1B951_PLAHL4.390e-2227.57Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
M4BUC1_HYAAE1.040e-1631.29Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008733Peroxisomal biogenesis factor 11PFAMPF05648PEX11coord: 11..242
e-value: 5.2E-14
score: 52.2
NoneNo IPR availablePANTHERPTHR12652:SF25MICROBODY (PEROXISOME) PROLIFERATION PROTEIN PEROXIN 11C (EUROFUNG)-RELATEDcoord: 8..242
NoneNo IPR availablePANTHERPTHR12652PEROXISOMAL BIOGENESIS FACTOR 11coord: 8..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_65contigContig_65:88973..94748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350511mRNA_12647Tribonema minus UTEX_B_3156 mRNAContig_65 88620..94748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350511|estExt_Genemark1.C_Ctg_650014 ID=Trimin1|350511|estExt_Genemark1.C_Ctg_650014|Name=jgi.p|Trimin1|350511|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=247bp
MGSQKGGRTLLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKS
TTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNL
VKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVAD
LYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRL
QVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFPSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008733PEX11