mRNA_12647 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350511
Unique NamemRNA_12647
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A835YVI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVI8_9STRA)

HSP 1 Score: 494 bits (1272), Expect = 9.820e-175
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1 
Query:    1 MGSQKGGRTLLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFPSQ 738
            MGSQKGGRTLLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFPSQ
Sbjct:    1 MGSQKGGRTLLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFPSQ 246
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BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: D8LAU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAU5_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 3.920e-54
Identity = 96/240 (40.00%), Postives = 149/240 (62.08%), Query Frame = 1 
Query:   13 KGGRTLLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFP 732
            +G +  LD++V + +  + +DK +K  GY+ S++A ++R  NGGK T  +EGL++LYG +   R + R  GT +A+  +++ S    W D RIR L + QA T + YHPME V     I PKL P++  WW+A++ + W+A+ + D+Y+++LK +EL+R +     +L   A+ E  A  + A++   A +R V LQ  R +FYLPNA+HW+F+KP +    VAALGL EA VG  Q FP
Sbjct:    7 EGAKDFLDRFVTFVAGTYRNDKCIKLLGYSLSTIAQIIRYRNGGKDTRRSEGLNQLYGALSTARVIFRMQGTAEAVWELKHLSGADGWDDVRIRPLARLQALTNVFYHPMEEVALAGGIAPKLFPVDQAWWWARSDWAWLAFCIIDMYMNVLKGRELRRREEGVRRKLRDCAESET-AGLRQALSQIAASKRQVALQQLRMVFYLPNAVHWAFIKPPVHPLVVAALGLGEAAVGAVQAFP 245
[Close]
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A067DAU4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067DAU4_SAPPC)

HSP 1 Score: 151 bits (382), Expect = 2.650e-40
Identity = 81/235 (34.47%), Postives = 134/235 (57.02%), Query Frame = 1 
Query:   28 LLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFP 732
            L+   V YTSA    DKV K+ G+ C++LA V+      K T  + GL  +  ++   R +TRF G  + +EA++NDSW     D R+R LVK Q ++ML+Y+P+EHV ++ ++ PK   ++      ++C  W  YVV D+Y + L+  +L + +     ++   AD +A A     +A  Q+ R+ + +  WR + +LPN IHWS  + ++P+  V  LG AE ++G+ QT+P
Sbjct:    5 LVKTVVKYTSATSKADKVSKSIGFGCATLARVIEFY-AAKPTRHSVGLGAVASQISYARYVTRFTGIFECIEALQNDSWTYADDDPRVRQLVKLQVYSMLLYYPLEHVSFVGFVAPKWFNVDAMRAMRQSCMAWTVYVVLDMYANHLRLNKLAKREKMLEAKIIDEADPDAVAERATELATIQSTRQYLIINQWRNVLFLPNCIHWSSERGIIPEVLVQFLGFAEGVLGIWQTWP 238
[Close]
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A1V9ZTM9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTM9_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.900e-39
Identity = 83/234 (35.47%), Postives = 133/234 (56.84%), Query Frame = 1 
Query:   28 LLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTF 729
            L  K VGY S     DKV K+ GY  ++LA V+  L   + T  ++GL  +  +V   R +TRF G  + ++A++NDSW     D  +R +VK Q ++ML+Y+P+EHV ++ ++ PKL+ ++   +  ++C  W  YVV DLY +  + + L + + A   +     D EA A   A +A  +A RR + L  WR + +LPN IHWS  + ++P+  V  L  AE I+G+ QT+
Sbjct:    5 LASKIVGYASTTSKADKVSKSIGYGLATLARVIE-LYAARPTRQSQGLGAVASQVSFARYVTRFTGVFECIDALQNDSWNYADDDPVVRQVVKAQIYSMLLYYPLEHVSFVGFVAPKLLNVDAMRYCRQSCMAWTVYVVLDLYANNRRLEALAKKEKALEAKTIDETDPEAVAERAAGLATIKATRRSLVLTQWRNVLFLPNCIHWSTERGIMPEVLVQFLAFAEGILGIYQTW 237
[Close]
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A8K1CIT4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIT4_PYTOL)

HSP 1 Score: 142 bits (359), Expect = 5.470e-37
Identity = 76/233 (32.62%), Postives = 130/233 (55.79%), Query Frame = 1 
Query:   31 LDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTF 729
            ++K+V Y+S     DK  KT GY   S+  +L +     S T T GL +L   + M R + RF G  ++ EAI+N+SW     D+ ++ +VK+QA++ML+Y+P+EHV Y+ Y+ PKL+ ++ +W+  ++C+ W AYV  DLY + L+   L + +       +   D++     Q   +  + +  +  LQ+  A F+ P  +HWS  + ++P+  V  L  AEAI G  +T+
Sbjct:    3 IEKFVRYSSGTLRSDKFAKTIGYGAGSIGHLLALAAKEDSDTST-GLKQLSSSISMARYVIRFTGALESYEAIKNNSWCYGDDDKHLQQIVKYQAYSMLVYYPLEHVSYIGYVAPKLLKIDANWFMRQSCWAWTAYVALDLYANQLRIMNLNKREKKLLADKDMPVDEKL----QELASLRKRRTELYYLQLRNACFF-PTCLHWSLERGLIPEPLVQFLCFAEAITGFWRTW 229
[Close]
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A2D4BSI6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSI6_PYTIN)

HSP 1 Score: 137 bits (345), Expect = 6.190e-35
Identity = 74/235 (31.49%), Postives = 130/235 (55.32%), Query Frame = 1 
Query:   31 LDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRR--IVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTF 729
            L+K+V Y+S     DK  KT GY C S+  +L +    K + ++ GL ++   + M R + RF G  ++ +A++N SW     D+ I+++V+ QA++MLIY+P+EH+ Y+ Y+ PKL+ ++ +W+  ++C+ W AYV  D+Y + L+  +L + +       +   ++  R         N  KRR  +  LQ+  A F+ P  +HWS  +  +P+  V  L   EAI G  +T+
Sbjct:    3 LEKFVRYSSGTLRTDKFAKTIGYGCGSIGHLLAIA-AQKDSDVSTGLKQISSNISMARYVIRFTGAFESYDALKNGSWCYGDDDKHIQSIVRLQAYSMLIYYPLEHISYVGYVAPKLIKMDANWFMRQSCWAWTAYVALDVYANQLRILKLNKREKELLANKDMPEEERKRELT------NIRKRRTELYFLQLRNACFF-PTCLHWSLERGCIPEPLVQFLCFIEAITGFWRTW 229
[Close]
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A024G3J3_9STRA (Uncharacterized protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G3J3_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.050e-23
Identity = 66/215 (30.70%), Postives = 109/215 (50.70%), Query Frame = 1 
Query:   73 DKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGL 717
            DK+ KT GY   SL  VL          + +GL KL   + + R +TR  GT  + +A R  SW  D  D   R + K QA+TM++Y+P+EHV Y+ ++ PKL+ ++      ++C  W+ Y++ D+Y +  + ++L   + +    + + +DD  R      +   +++    +L   R    LP  +HWS  + VLP+  V  L   EA VGL
Sbjct:   19 DKIYKTIGYGSGSLGHVLSHFRA--DPDIVDGLKKLSSAISLARYVTRVTGTFQSYDAFRCVSWALDDDDSLNRLIAKVQAFTMMLYYPLEHVSYIGFMAPKLIQIDAGKISRQSCIAWLMYIILDMYANQRRIRKLALEECS----ILEGSDDTDRKKKLPEIRTRKSELHYTQL---RNACLLPTCLHWSIHEGVLPESVVQYLCCLEACVGL 224
[Close]
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: F0WKH0_9STRA (Uncharacterized protein AlNc14C133G7021 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WKH0_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.280e-22
Identity = 65/215 (30.23%), Postives = 110/215 (51.16%), Query Frame = 1 
Query:   73 DKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGL 717
            DK+ KT GY   SL  +L   +      + +GL KL   +   R +TR  GT ++ +A+R+ SW  D  D   R + K QA+TM++Y+P+EHV Y+  + PKL+ ++   +  ++   W+ +++ D+Y +  + ++L   + +    LE   D + +   +  V     KR    +Q+  A F LP  +HWS    VL +  V  L   EA +GL
Sbjct:   19 DKIYKTIGYGSGSLGHMLS--HSRIDPDIVDGLKKLSSAISFARYVTRITGTFESYDALRSGSWASDDDDSLNRLIAKAQAFTMMLYYPLEHVSYIGLMAPKLIQIDAGKYSRQSSIAWLVFIILDIYANQRRIRKLALEELSI---LEACGDADCK---KKLVDIRTRKREFCYVQLRNACF-LPTCLHWSIHGGVLRESLVQYLCCLEACIGL 224
[Close]
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: A0A0P1B951_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B951_PLAHL)

HSP 1 Score: 100 bits (249), Expect = 4.360e-21
Identity = 59/214 (27.57%), Postives = 106/214 (49.53%), Query Frame = 1 
Query:   31 LDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPK 672
            +DK+  ++S     DK  KT GY   ++  ++      K T  ++G   +   + M R + RF G  ++  A +NDSW        I+ +V+ QA +M+IY+P+EH+ Y+ ++ PKL+ ++      ++C  W  Y++ D+Y + ++F  L   +     Q++    DE RA    ++   Q +RR +     R   +     HWSF K  LP+
Sbjct:   12 VDKFARFSSRTIDADKFYKTIGYGLGAVGHLMAHTMQ-KETETSKGFQAIASNISMARYVIRFTGGVESFAAWKNDSWCYGDDSEHIKQVVRLQALSMIIYYPLEHISYIGFVAPKLLDIDAMKVSRQSCQAWGIYIILDVYANAIRFLTLTSKEKQIKEQMD--LSDEERATLLTSI---QLRRRELYYVQLRNFLFAGPCFHWSFQKSFLPE 219
[Close]
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Match: M4BUC1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUC1_HYAAE)

HSP 1 Score: 84.7 bits (208), Expect = 6.340e-16
Identity = 46/147 (31.29%), Postives = 78/147 (53.06%), Query Frame = 1 
Query:   31 LDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLK 471
            +DK V ++S+    DK+ KT  Y   + AA        + T   + +  L   + M R + RF G  +A  A++  SW     D  ++ LV+ QA +M++YHP+EHV Y+ ++ PKL+ ++   +   +C  W  YV+ D+Y S L+
Sbjct:    7 VDKLVRFSSSSIGADKLYKTLAYGLDA-AAYFFAPTAQQETA--QNIHALASNISMARYVLRFTGGLEAYTALKKGSWSCKDDDEHVQRLVRLQALSMVVYHPLEHVSYVGFVAPKLLKVDAMHFSRLSCRAWGVYVLLDIYASALR 150
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350511 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A835YVI8_9STRA9.820e-175100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LAU5_ECTSI3.920e-5440.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A067DAU4_SAPPC2.650e-4034.47Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZTM9_9STRA3.900e-3935.47Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A8K1CIT4_PYTOL5.470e-3732.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BSI6_PYTIN6.190e-3531.49Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A024G3J3_9STRA1.050e-2330.70Uncharacterized protein n=3 Tax=Albugo candida Tax... [more]
F0WKH0_9STRA3.280e-2230.23Uncharacterized protein AlNc14C133G7021 n=1 Tax=Al... [more]
A0A0P1B951_PLAHL4.360e-2127.57Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
M4BUC1_HYAAE6.340e-1631.29Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_65contigContig_65:88620..94748 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350511|estExt_Genemark1.C_Ctg_650014
DescriptionPeroxisomal biogenesis factor 11 (PEX11)
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2CXQZ@1|root,2RZ56@2759|Eukaryota
Evalue9.28e-42
Seed ortholog112098.XP_008607189.1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeroxisomal biogenesis factor 11
Ec32 orthologEc-27_006350.1
TranscriptId350833
TrackFilteredModels1
ProteinId350511
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350511gene_12647Tribonema minus UTEX_B_3156 geneContig_65 88620..94748 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350511Trimin1|350511|estExt_Genemark1.C_Ctg_650014Tribonema minus UTEX_B_3156 polypeptideContig_65 88973..94748 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12647_8exon_12647_8Tribonema minus UTEX_B_3156 exonContig_65 88620..89110 -
exon_12647_7exon_12647_7Tribonema minus UTEX_B_3156 exonContig_65 90032..90105 -
exon_12647_6exon_12647_6Tribonema minus UTEX_B_3156 exonContig_65 90940..91055 -
exon_12647_5exon_12647_5Tribonema minus UTEX_B_3156 exonContig_65 92030..92130 -
exon_12647_4exon_12647_4Tribonema minus UTEX_B_3156 exonContig_65 93350..93484 -
exon_12647_3exon_12647_3Tribonema minus UTEX_B_3156 exonContig_65 94167..94248 -
exon_12647_2exon_12647_2Tribonema minus UTEX_B_3156 exonContig_65 94495..94556 -
exon_12647_1exon_12647_1Tribonema minus UTEX_B_3156 exonContig_65 94716..94748 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_12647UTR3_12647Tribonema minus UTEX_B_3156 three_prime_UTRContig_65 88620..88972 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12647CDS_12647Tribonema minus UTEX_B_3156 CDSContig_65 94716..94748 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12647 ID=mRNA_12647|Name=jgi.p|Trimin1|350511|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1094bp|location=Sequence derived from alignment at Contig_65:88620..94748- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGATCCCAGAAGGGAGGCCGAACTCTGCTGGACAAGTATGTCGGGTA
CACATCCGCCTACTTCTACCACGACAAGGTTTTGAAGACTGGCGGCTACA
CTTGCTCCTCGCTGGCGGCGGTACTGCGGGTGCTCAATGGCGGGAAGTCC
ACAACACTCACAGAGGGCCTGGACAAGCTGTACGGCGAGGTGGGTATGAC
GCGCTGCCTGACGCGCTTCATTGGCACCACGGACGCGCTGGAGGCGATAC
GCAACGACAGCTGGGTCGGCGACTGGAAGGACCGCCGCATCAGGAACCTC
GTGAAATTCCAGGCGTGGACGATGCTCATCTACCACCCCATGGAGCATGT
TGGCTATCTGGCGTACATCGTGCCGAAACTGGTGCCGCTCAATGGCGACT
GGTGGTTTGCAAAGGCGTGCTACTGGTGGGTCGCATATGTCGTGGCGGAC
CTCTACATCAGCCTGCTGAAGTTCAAGGAGCTCAAGCGCAGCGACGCCGC
GGCCGCGCTGCAGCTGGAGCAGGCTGCAGATGACGAGGCGCGCGCCGCGG
CACAGGCGGCGGTCGCGGCCAACCAGGCCAAGCGGCGCATCGTACGGCTG
CAGGTGTGGCGCGCCATCTTCTACCTGCCCAACGCCATCCACTGGTCCTT
TGTCAAGCCGGTGCTGCCCAAGGGCGCCGTCGCCGCGCTCGGCCTGGCGG
AGGCCATCGTCGGACTCAAGCAGACGTTCCCCAGCCAATGAGGCGCCGAC
CGCGTCAGGGGGCGCGCAGGCGGTCTGCGAGGAGCACCGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCAGCGCCCCACAGGAGTGGCAGTTGTAGCAGCGC
TCACACCACCACGGGCAGTTGTTGGGCTGACGCACGGCGCGGGTTGTTGC
CGAATGAGCAATGCTGTGTCGAGCAGTGTGAGCTGCCGTGACGGCGCTTG
AAGTTTGGTGCTGCCAGCGCAACGGGGCGTCGCACACGTGGTTGAAGCAG
CGTACCGCTGGTCAGTCTCTCGAAGGAGCGCGGCGCGGCGGCGGCACTGG
GTGTTGTGACGATTGGGCACTGCATGCCCGACTTCGCGATCTCC
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protein sequence of jgi.p|Trimin1|350511

>Trimin1|350511|estExt_Genemark1.C_Ctg_650014 ID=Trimin1|350511|estExt_Genemark1.C_Ctg_650014|Name=jgi.p|Trimin1|350511|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=247bp
MGSQKGGRTLLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKS
TTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNL
VKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVAD
LYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRL
QVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFPSQ*
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mRNA from alignment at Contig_65:88620..94748-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12647 ID=mRNA_12647|Name=jgi.p|Trimin1|350511|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6129bp|location=Sequence derived from alignment at Contig_65:88620..94748- (Tribonema minus UTEX_B_3156 )
ATGGGATCCCAGAAGGGAGGCCGAACTCTGCTGGTGAGATTGCACCGCAA
CTTCCGGCTTCAAGCCTGCGTCTGGCACAGAGTCGGTGCTTGATGTCACG
TGTGCACCTGATGTGCCTTGCATTTGCCTTTGTGTGCTTCAATACTGTTG
CGCGCTATTGCTGATATTTTTGTGGCATTTGCACGCTCGCAGGACAAGTA
TGTCGGGTACACATCCGCCTACTTCTACCACGACAAGGTTTTGAAGACTG
GCGGGTGAGCACGCTCGTCCGATCCCAGCCTCGTGGCATGCTCGATTGAA
GTGCCTCCCCGGTTGCCGGTTACAATGCGCAACAGCAGCATCTACCCGCC
TGCAGCCATTGCATTGTAGCTGAGCTAAATCTGCTGGCAAGCAATTGGCT
CACAGTGCTTAATCATGCCAGCAATCGTCTGGAATAGCGACTGTATTGCG
AACGCTCATGACCTCGCTGTTCCTCTGCCGTTGCTGCCCGCCGCGCACAG
CTACACTTGCTCCTCGCTGGCGGCGGTACTGCGGGTGCTCAATGGCGGGA
AGTCCACAACACTCACAGAGGGCCTGGACAAGGTGACACCAAGGCATAAT
TATATCAGAGCTTGATTTGGCTTCGCATCCGATGCTCACTCTGGATGCTC
AGGTTTGCAGTCGCGCCCCACCCTACAACTTCTTGTGTCCGTCACAATTG
CGCTGCACGGTAAACCAGAAAAGTTGACGACTAGCACTGCTGCCGGTGGT
CGTGCATGTACACACTGGCCGCTGCCATCAGCTTCAAGTTGGTGGAAAAG
ACTTCTACTCGCTTCGAAGTTAAAACCCTTGCCCAGAGTCTAACCCTCGA
GTGGGGCTTGGTGACTGCTGCGCTGCATAGACCTGTCTGCAACTCTCGGC
TCGAACCAACCTGAAGGTGTGTGTGTCGCGTCAACTCTGCGGCAAAGTGG
GCATGCGCGCTGCTGCACGATCCATCGGCGCCAGCGGGCCTGTGCGCACG
CTGTTCTCTTTTTCTAACTCCAGCTATGTTCTGTTGCTGCAACTCTAGCC
ATGTGGCTCTGCATGCCGACCCTTGCGGAATCGCATGCGCCGCATTCCAG
CTGTGCGACAAAGCGGGCACGACGCGGCACCCACCATGATTCGCAGGGAC
AATAAGCGGACCCGCATGTCTCTGCATGTAAACTTCAAAGTACACGCATA
ACTGATATGTTGATGAACTACTTACGATGTGCACCTGCTCTAATCTGCAC
GCGCGCCGCACCAGCTGTACGGCGAGGTGGGTATGACGCGCTGCCTGACG
CGCTTCATTGGCACCACGGACGCGCTGGAGGCGATACGCAACGACAGCTG
GGTCGGCGACTGGAAGGACCGCCGCATCAGGAACCTCGTGAAATTCCAGG
TATGGTGAGAACGGTGCTGGCGGTGGGTCTCTGCGTCTATTGTCTGCGCT
GACGCGGAGCGGGCGATGGGGAACCCCGTTGTGCTTCCACGTGTGCTGGT
GTCCCCCATCAAGTGACAGCGTGGGAAGTGCACTGATGGTCCTTGCCTCA
TCTGTAGTATGTGCATTGAGAAGTAGAGCTTGCAGGGGCTTGGTCATGCC
AGTATCAATGGTGACATCAGAAGGCGCAGGCGCATCAGGAGCCTTCAGGT
GCAGCGCTCCACATCTCCGCCGAGCGAGCGCTCGAGCACTGTACTGGCGA
ATTCTGTCCCGCTCATGTGCATTGACACCTCTCGGCGTACAGGCTGAGGT
GCGCTGATAAGCGGCAGCGCTGCAGCATGTCATCAAAAGACCCTACTGTT
ATGGAGAGAATAGATGGGTTGAAATATACACACCCTCACAAGGTTTCAGC
ACACTGCAGAGTATCATCCTCTGTGCACCAGCAAGTGTTCGGGCAGATGA
TGATGCAGAGAGATATGTGATCAGCGCAGCGGGCAGGCCCTAGCTGACTC
GCAGCATGTATAAGCTGCGAGCATGTAGTGCAGTGCTCCGGTTATGAGTA
CCCCACTTGAAGTTGCCGCAACGTTCACCGCATGTACCTAGCCGACATGG
CGCTGCACAACCGCTAGTTGAAGTAACGTGCCAATGTCCAGCACATGCTG
CCGCTGCTCGCTGCTGAGCCATATTTCCAGCTGTGAGATATCGCTGTGCA
CTGCGGCGACGGCGCACGGTGATGCGCAACCGGCGCTGCCAGTTCTTACC
CCATGTTTCTTTAGCGATCGGCGGTGTACAGCCAGCTGTCCACCATTGTC
TCGTTGCTGCCGAAGATAGGAGGTCCTGATCTCACAAGCAGTCCATTGCG
GACACAATGTGCTAGTGGCCGTGAATGTTTTCACGACTTCTGTCGAGGCA
CGGTTGGCGCACGTGTTGGTGGTAATGCGCAGCGCTTTCAGTGGGTCCCC
GCCCTGGTGACTCGATGGGGTCTGCTACAGCACCTAGGGTTAGGGTTAGG
TTAGGGTTGAATTTGGCGCGACTGCCATGCGCTTGCCTGCGACCCAGCCT
TCCCATCTGAGTTGGGGGGGCATAATTCGCACATACATGGAAGTATTGCG
GAGCGTACGTGCATAAGACGCCACATTTCTCAATGCGCTACTGAGCCTCG
CTGCTGTGAACTCCACAGGCGTGGACGATGCTCATCTACCACCCCATGGA
GCATGTTGGCTATCTGGCGTACATCGTGCCGAAACTGGTGCCGCTCAATG
GCGACTGGTGGTTTGCAAAGTGAGCAGGATCGCAAAAAACACGCTTCTGG
CACTTCGCGAGGGCCTGACCGGTATGCACTGTGGTGGTTGAAAAAAACAC
CTCAATTGTCATATGGCAGAGGCGGCAACCTCAGCAAACGTCACATATAC
GGGAAATGATGTACCATTTCTGATCTGAGCGTGCAATGCGCTCATGATCT
AAGTCGCCTGTGCCGTACCAGTCTGAGACTTACTTCTACTTTGAGGTCAT
GGTGCTACTGTACCCGGCCCCAATTTGTTGAACCCTAACCCTCATAATTT
GCACAATTGCGCCACATTGGTGGTCCTGATGACACTGGGAGAGTGATTAC
CCCAACACCACATGCGCTAGGTACCTGCATTCCTTTTCTCGCCGCAAATT
TGCATGATGTGCCACTACTCTTCAACGCAGCGAGTCAGCCTCACAACCGT
TACAGTGGCGTCGCATGTCAATGGGCCAGCTAGGCGCTTCACGTGCCACG
TCCATTCTCGGTCTTTTCTTTCAGAGCAGCTGCAGATCTCAAAGAGAACA
TGTAGCCGGCCTTGCATAAAGTCAGAGTCAGGGTCACGGTCTCGAGAACA
CGGTCTCGAGAACTTGCGTGCGCTGTTTTGCAAGGGACGATGTGCGTTGC
TCAGCGATTATGGCGTCGCTGCTCAGCAGCGGTACCGGCGCAGCACCGCT
CAGCACTGCGACAGCCTGAAAACCATCGCTCCTCGATGATCCATGCGCAC
ACGGTGGCATCTCCAATCAGCGGCGGCGCAGCGCAGCGCTGAACGGGAGG
CGCATCTCAGCGACAGCCAGCGGCAGTGCTCAGGCGATGGCGCCATCGCG
CACCGCTGCTCGTACGCGTGCTGTCAGCACAGCAGCAGCTCGCAATCTCT
CTCTCTCTTGCAGTTCTCGCAGTCCGCATCCTTGCTCAGATCCGTGCACA
GATGTTGACCTTAAGAGTTCACCATTGCTGCACGCGCACACAGGGCGTGC
TACTGGTGGGTCGCATATGTCGTGGCGGACCTCTACATCAGCCTGCTGAA
GTTCAAGGAGCTCAAGCGCAGCGACGCCGCGGCCGCGCTGCAGCTGGAGC
AGGCTGCAGGTACTCCGGCCATACCCGGCGCACCCAACGCATTGCCTGGG
GCTGTCACCATCACTTTTTGACACACTGGAGGAACGGCGGTGCTGTTGCG
CTGCTGCCCTGTCACAATGCTGCAAGTTCCCAGTCATCATGCCATTTTTT
TTTTTTCACATCACAAACTCCCGTGAGCTGTGCGCGTGATGCTGATGACG
AGGCGCCGGCGGCAGCGCTTCAGCATATGCCGGCGCCACCATGCTAGCCG
CAGCTCTACACAACAAGTCCATATTCGCTGATTGACCGCATCTGGACAAC
GGGTCCGCTGAATGAACACTACTCTGCTGTGTGTTCGCCAGCCGTCGCAC
CACTCTTCTCTGTGGCGCAGAGCACTGTTGCATGCCACCGCTGGGCTGTT
GGCCTGCATGCGGCGCTGCTGCTGCGCTCACTCGCTGCTGCGCTGTCGGC
AGTGCCGCCGCCGTCATTCGCGGGGCGCCCCACACAAAGTGGCCACTCAC
TTTGAGCGGCAGCTTGACTGGCACGTCACCTCCAGCGACCGCGCCGCACT
GCGCATTGACTCGAAGCATGCTCTTGTGCTGCGCGCTGGCTTTGCACAGA
TGACGAGGCGCGCTGCCGCGGCGCTGTTTATCACCGATTTGCTCCAGCTT
TTCCTGTGCTCGCAAGTACTAAAAGTCTGCATTCCAAAGAGACGCGATGC
TGCCGCCGTCATTCGCATAGCGCCCACGCAGCACTAACCGCTCATGCGGG
CGGCAACATGACTGGCATGTCACCCCCGGTCGTCAGGTCGCGCTGCTTCT
TGATGCAAAGTGTTTGTGCTTGTGTGCTGCGCGCTCGGTGCAGATGACGA
GGCGCGCGCCGCGGCACAGGCGGCGGTCGCGGCCAACCAGGCCAAGCGGC
GCATCGTACGGCTGCAGGTACAGACAGCATACAAAAACATCTGCCACTGC
CGATGTCAGGAGGGGCTTGCTCGGCAACGCGCACTGGTACACTGAGCAGG
GTCAACTGCATGGCACTCGTGCAGCTGCAACGGCGGCACAGTGGTTGTTG
CACGCGTCAACGCATGAGTTTGCCGTGGCAACTCTGCAGATGTGGCTGGA
ATGCATGACCACGTGCAACACCCAAGGAAGCTGCCAGCTGATTCTGAAGC
TGGCCCTCTGCATGTGGTCACACTGTGCTCTGCCTGCACAGTGTGCGCCG
ACCGCATTCAGCGCAAACGAGCTTGGGGCACGCATCGCACTGCAGCCTCA
ACCCCGCACACATGCTTGGCGACCTGCAAAGGTGGAGCAACGCTGCTCCG
CCTTTGTCTGCAGCTCACCTGTTGCGTGTGAACCTAACCCTAACCCAAAG
TTCACTCCGCAAGCATCACTGCAGCACTGCGCTGCTAGCAAGTCGGCGAG
AGCATTGTCTGCAAGAGAGCACAGTGACCGTTTATGACTTGATCGCCAGT
GCAGGCGAACTTAATTAGACGCGGCGTCGGGTGTGCGAGGGATATTGAAG
AATTTGAGGTCAGTGATGCGAAATGCGTGTCTGTCTTTATAACGAGGTCG
GTGCTTTGCCCGACGGCTCTCGCTGTACTGACGACAGCAGTGCACAGCCT
CAACACTCGCCACGCGCTTGAGAGCGCAGGCACTGCTCACACCACAAGTA
GCTGGTGATTGCTCGCATCACCTGAGGCGCGCCTCTATCACCACAGCACC
TAGGGTTCAGACGGCCTGGCCTGGCCTATCATCATGGCAACAACTTCAAT
TTGAAGGGTTCAGACTGCCTAGGCATGCGAGAGTCAACCTTCCCCCCTCT
CTCGCTCTCGTGCCCCTCGCGCGCACGCCATCGCTCAGGTGTGGCGCGCC
ATCTTCTACCTGCCCAACGCCATCCACTGGTCCTTTGTCAAGCCGGTGCT
GCCCAAGGGCGCCGTCGCCGCGCTCGGCCTGGCGGAGGCCATCGTCGGAC
TCAAGCAGACGTTCCCCAGCCAATGAGGCGCCGACCGCGTCAGGGGGCGC
GCAGGCGGTCTGCGAGGAGCACCGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCAGCGCCCCACAGGAGTGGCAGTTGTAGCAGCGCTCACACCACCACGGG
CAGTTGTTGGGCTGACGCACGGCGCGGGTTGTTGCCGAATGAGCAATGCT
GTGTCGAGCAGTGTGAGCTGCCGTGACGGCGCTTGAAGTTTGGTGCTGCC
AGCGCAACGGGGCGTCGCACACGTGGTTGAAGCAGCGTACCGCTGGTCAG
TCTCTCGAAGGAGCGCGGCGCGGCGGCGGCACTGGGTGTTGTGACGATTG
GGCACTGCATGCCCGACTTCGCGATCTCC
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Coding sequence (CDS) from alignment at Contig_65:88620..94748-

>mRNA_12647 ID=mRNA_12647|Name=jgi.p|Trimin1|350511|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=741bp|location=Sequence derived from alignment at Contig_65:88620..94748- (Tribonema minus UTEX_B_3156 )
ATGGGATCCCAGAAGGGAGGCCGAACTCTGCTGGACAAGTATGTCGGGTA
CACATCCGCCTACTTCTACCACGACAAGGTTTTGAAGACTGGCGGCTACA
CTTGCTCCTCGCTGGCGGCGGTACTGCGGGTGCTCAATGGCGGGAAGTCC
ACAACACTCACAGAGGGCCTGGACAAGCTGTACGGCGAGGTGGGTATGAC
GCGCTGCCTGACGCGCTTCATTGGCACCACGGACGCGCTGGAGGCGATAC
GCAACGACAGCTGGGTCGGCGACTGGAAGGACCGCCGCATCAGGAACCTC
GTGAAATTCCAGGCGTGGACGATGCTCATCTACCACCCCATGGAGCATGT
TGGCTATCTGGCGTACATCGTGCCGAAACTGGTGCCGCTCAATGGCGACT
GGTGGTTTGCAAAGGCGTGCTACTGGTGGGTCGCATATGTCGTGGCGGAC
CTCTACATCAGCCTGCTGAAGTTCAAGGAGCTCAAGCGCAGCGACGCCGC
GGCCGCGCTGCAGCTGGAGCAGGCTGCAGATGACGAGGCGCGCGCCGCGG
CACAGGCGGCGGTCGCGGCCAACCAGGCCAAGCGGCGCATCGTACGGCTG
CAGGTGTGGCGCGCCATCTTCTACCTGCCCAACGCCATCCACTGGTCCTT
TGTCAAGCCGGTGCTGCCCAAGGGCGCCGTCGCCGCGCTCGGCCTGGCGG
AGGCCATCGTCGGACTCAAGCAGACGTTCCCCAGCCAATGA
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