mRNA_12688 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|149483 vs. uniprot
Match: A0A836CA60_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA60_9STRA) HSP 1 Score: 322 bits (825), Expect = 1.980e-111 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 Query: 1 KAMELFCGAGGLSEGAKPFVHTVLASDINERACKLFASNHRGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISVNDCGLPTKRRRVFIM 483 KAMELFCGAGGLSEGAKPFVHTVLASDINERACKLFASNHRGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISVNDCGLPTKRRRVFIM Sbjct: 1 KAMELFCGAGGLSEGAKPFVHTVLASDINERACKLFASNHRGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISVNDCGLPTKRRRVFIM 161
BLAST of jgi.p|Trimin1|149483 vs. uniprot
Match: A0A835YGJ9_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGJ9_9STRA) HSP 1 Score: 313 bits (803), Expect = 4.310e-98 Identity = 157/161 (97.52%), Postives = 159/161 (98.76%), Query Frame = 1 Query: 1 KAMELFCGAGGLSEGAKPFVHTVLASDINERACKLFASNHRGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISVNDCGLPTKRRRVFIM 483 KAMELFCGAGGLSEGAKPFVHTVLASDI+ERACKLFASNH GTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKG+QCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVIS NDCGLPTKRRRVFIM Sbjct: 607 KAMELFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGLQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISGNDCGLPTKRRRVFIM 767
BLAST of jgi.p|Trimin1|149483 vs. uniprot
Match: A0A835ZBI0_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBI0_9STRA) HSP 1 Score: 275 bits (702), Expect = 3.640e-84 Identity = 139/152 (91.45%), Postives = 141/152 (92.76%), Query Frame = 1 Query: 28 GGLSEGAKPFVHTVLASDINERACKLFASNHRGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISVNDCGLPTKRRRVFIM 483 GG + FVHTVLASDI+ERACKLFASNH GT VMPANINDR AQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQ LDLAQGLGFDHSHNVIS NDCGLPTKRRRVFIM Sbjct: 529 GGSARAQNRFVHTVLASDISERACKLFASNHCGTAVMPANINDRCAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQALDLAQGLGFDHSHNVISGNDCGLPTKRRRVFIM 680
BLAST of jgi.p|Trimin1|149483 vs. uniprot
Match: A0A835YZF8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF8_9STRA) HSP 1 Score: 269 bits (688), Expect = 1.750e-83 Identity = 142/162 (87.65%), Postives = 144/162 (88.89%), Query Frame = 1 Query: 1 KAMELFCGAGGLSEGAKPFVHTVLASDINERACKLFASNHRGTTVMPANIND--RSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISVNDCGLPTKRRRVFI 480 KAMELFCGA GLSEGAKPFV TVLASDI ERACKLFASNH GTTVMPANIND RSAQLHIIAEA RLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIIS LQVSAA+STVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVIS ND R V + Sbjct: 28 KAMELFCGAEGLSEGAKPFVDTVLASDICERACKLFASNHCGTTVMPANINDGHRSAQLHIIAEACRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISKLQVSAAISTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISGNDVTKRIPHRHVVV 189
BLAST of jgi.p|Trimin1|149483 vs. uniprot
Match: A0A835ZBG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG8_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.320e-57 Identity = 98/101 (97.03%), Postives = 99/101 (98.02%), Query Frame = 1 Query: 1 KAMELFCGAGGLSEGAKPFVHTVLASDINERACKLFASNHRGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQV 303 KAME FCGAGGLSEGAKPFVHTVLASDI+ERACKLFASNH GTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQV Sbjct: 642 KAMERFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQV 742
BLAST of jgi.p|Trimin1|149483 vs. uniprot
Match: A0A835YYY1_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYY1_9STRA) HSP 1 Score: 180 bits (456), Expect = 3.400e-55 Identity = 84/159 (52.83%), Postives = 117/159 (73.58%), Query Frame = 1 Query: 7 MELFCGAGGLSEGAKPFVHTVLASDINERACKLFASNHRGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISVNDCGLPTKRRRVFIM 483 ME++CGAGG + G K ++ T LA+D ++ A L+A NH V+ + N+R QL +I EA RLGVEV GGPPCT FS +GKR + +G QC++SML V AA+ ++RM +LENV+GF+STP++Q TL A+ LGF SH+V++ +DCGLPT RRRVF++ Sbjct: 1 MEMYCGAGGFTHGVKEYLDTALATDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRETHEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMSTPQWQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFLV 159
BLAST of jgi.p|Trimin1|149483 vs. uniprot
Match: A0A836C7I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7I0_9STRA) HSP 1 Score: 117 bits (294), Expect = 4.590e-28 Identity = 64/79 (81.01%), Postives = 66/79 (83.54%), Query Frame = 1 Query: 1 KAMELFCGAGGLSEGAKPF--VHTVLASDINERACKLF--ASNHRGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGP 225 KAMELFCGAGGLSEGA PF V TVLASDI+ERAC LF ASNH GTTVMPANINDRSA+LHI AEARRLGVEV P Sbjct: 403 KAMELFCGAGGLSEGATPFQIVDTVLASDISERACNLFQVASNHCGTTVMPANINDRSARLHISAEARRLGVEVQRWTP 481
BLAST of jgi.p|Trimin1|149483 vs. uniprot
Match: A0A835YXD3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD3_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.810e-19 Identity = 56/160 (35.00%), Postives = 75/160 (46.88%), Query Frame = 1 Query: 4 AMELFCGAGGLSEGAKPFVHTVLASDINERACKLFASNHRGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISVNDCGLPTKRRRVFIM 483 AME++CGAGG + GAK ++ T LA+D ++ AC +A NH V+ + N+R QL +IAEA RLGVE +Q TL A+ LGF SH+VI +DCGLPT RRRVF++ Sbjct: 2222 AMEMYCGAGGFTHGAKEYLDTALATDFSQSACARYARNHPAARVIQGDANERRVQLALIAEATRLGVE-------------------------------------------------------WQHTLGAARTLGFSFSHHVIRGDDCGLPTMRRRVFLV 2326
BLAST of jgi.p|Trimin1|149483 vs. uniprot
Match: A0A3L6JLL9_THOAR (DNA (cytosine-5-)-methyltransferase n=1 Tax=Thorarchaeota archaeon (strain OWC) TaxID=2053491 RepID=A0A3L6JLL9_THOAR) HSP 1 Score: 91.3 bits (225), Expect = 1.310e-18 Identity = 60/167 (35.93%), Postives = 88/167 (52.69%), Query Frame = 1 Query: 7 MELFCGAGGLSEGAKPFVHTVL-ASDINERACKLFASNHRGTTVMPANINDRSAQLHII--AEARRLG--VEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPE---FQQTLDLAQGLGFDHSHNVISVNDCGLPTKRRRVFIM 483 ++LFCGAGGLSEG + H VL A+D+N C+ + NH TV+ AN+ + + ++I E++ G + + +GGPPC FS +GKR +I V VL+ENV G + + LD G+ HS V+ + G+P +RRRVFIM Sbjct: 159 VDLFCGAGGLSEGLRQAGHRVLVATDLNRHMCETYRLNHENATVVQANVLNEADTDNLIDTIESKLKGRTLNLLAGGPPCQGFSTAGKRSPSDVRNSLIFRTLVFIHKLRPENVLIENVPGIRWIRQGRLLKTMLDALTREGYHHSTLVLKAEEYGVPQRRRRVFIM 325
BLAST of jgi.p|Trimin1|149483 vs. uniprot
Match: UPI001EFACA08 (DNA cytosine methyltransferase n=1 Tax=Campylobacter sp. RM12651 TaxID=1660079 RepID=UPI001EFACA08) HSP 1 Score: 88.6 bits (218), Expect = 7.840e-18 Identity = 53/168 (31.55%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 KAMELFCGAGGLSEGAKPF--VHTVLASDINERACKLFASNHRGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCII--SMLQVSAAVSTVRMVLLENVVGFLSTPE---FQQTLDLAQGLGFDHSHNVISVNDCGLPTKRRRVFIM 483 K ++LFCGAGG S G + VL D N+ A + F NH+ + +I+ + II+ A+ L V GGPPC FS+ GKR + + L+V ++ ++V++ENV +ST F + ++ + LG+ + V++ D G+P R R+FI+ Sbjct: 3 KVLDLFCGAGGFSNGLEQIDDFTCVLGVDFNKHALETFEYNHKNAQALFCDISQDKNKKQIISLAKELCVNTIIGGPPCQGFSLQGKRLGLNDPRNYLFKDFLEVVKGINP-KLVIIENVKTLVSTSSGYFFNEIINTLRKLGYSSDYRVLNAKDFGIPQNRERLFIV 169 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149483 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12688 ID=mRNA_12688|Name=jgi.p|Trimin1|149483|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=483bp|location=Sequence derived from alignment at Contig_65:566948..567430- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AAAGCCATGGAACTCTTTTGTGGTGCAGGGGGGCTCAGCGAGGGCGCAAAback to top protein sequence of jgi.p|Trimin1|149483 >Trimin1|149483|gw1.65.82.1 ID=Trimin1|149483|gw1.65.82.1|Name=jgi.p|Trimin1|149483|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=161bp KAMELFCGAGGLSEGAKPFVHTVLASDINERACKLFASNHRGTTVMPANIback to top mRNA from alignment at Contig_65:566948..567430- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12688 ID=mRNA_12688|Name=jgi.p|Trimin1|149483|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=483bp|location=Sequence derived from alignment at Contig_65:566948..567430- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_65:566948..567430- >mRNA_12688 ID=mRNA_12688|Name=jgi.p|Trimin1|149483|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=483bp|location=Sequence derived from alignment at Contig_65:566948..567430- (Tribonema minus UTEX_B_3156 )back to top |