mRNA_10158 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350504
Unique Name	mRNA_10158
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|350504 vs. uniprot
Match: A0A835YM59_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM59_9STRA)

HSP 1 Score: 920 bits (2378), Expect = 0.000e+0
Identity = 666/666 (100.00%), Postives = 666/666 (100.00%), Query Frame = 1

Query:    1 MNPVDDNLQDEFDFEAGAPYPPKPSADSASTTYRDAFFAVIFALHLAVILALAIFKGIPAVAQGGIDQVDVDPAGGSETPVNDGDNPIPLVLSLGVVMVLGAFLSTVWVKVLVSHGESVVRCTILSTVAWFVLSAVAAALLGQSGGAVALLVLAGIAYWYYVLINSHIEFAGKNLKVACSAVLAMPGTVTVAVTLLTVQALWCMIWGLAMXXXXXXXXXXMLGVATNFSAPITAADGTVYDADDCTTYETQRPNPTFSAACTGYYGGGTCFKCVCGGATVYDDAECRSERVSAGVYALMLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIWGCGVIANISHCTTAGAVAAWWFAGRNGPAADASSPVTASLRRACTTXXXXXXXXXXXXXXXXXXXXXXXXLRRSRRGMGALWAAAAECLAHAAERVVRVFSRYALVHAAVYGTTLPVAGSEVEVESNLXXXXXXXXXXXXXXXXXXXXXXXXXXXSERVXXXXXXXXXXXXXXXXXXXXXXXXXVEVESNLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXMCELVLAGAACLTAAHGRRAHRQSSPKVWALFKRRGWSAIVNDQLCDNALALACAVVAALCGLAGXXXXXXXXXXXXXXXXXASFGVLMGYNLAAVAVSVVILMSRTFDHLNE 1998
            MNPVDDNLQDEFDFEAGAPYPPKPSADSASTTYRDAFFAVIFALHLAVILALAIFKGIPAVAQGGIDQVDVDPAGGSETPVNDGDNPIPLVLSLGVVMVLGAFLSTVWVKVLVSHGESVVRCTILSTVAWFVLSAVAAALLGQSGGAVALLVLAGIAYWYYVLINSHIEFAGKNLKVACSAVLAMPGTVTVAVTLLTVQALWCMIWGLAMXXXXXXXXXXMLGVATNFSAPITAADGTVYDADDCTTYETQRPNPTFSAACTGYYGGGTCFKCVCGGATVYDDAECRSERVSAGVYALMLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIWGCGVIANISHCTTAGAVAAWWFAGRNGPAADASSPVTASLRRACTTXXXXXXXXXXXXXXXXXXXXXXXXLRRSRRGMGALWAAAAECLAHAAERVVRVFSRYALVHAAVYGTTLPVAGSEVEVESNLXXXXXXXXXXXXXXXXXXXXXXXXXXXSERVXXXXXXXXXXXXXXXXXXXXXXXXXVEVESNLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXMCELVLAGAACLTAAHGRRAHRQSSPKVWALFKRRGWSAIVNDQLCDNALALACAVVAALCGLAGXXXXXXXXXXXXXXXXXASFGVLMGYNLAAVAVSVVILMSRTFDHLNE
Sbjct:    1 MNPVDDNLQDEFDFEAGAPYPPKPSADSASTTYRDAFFAVIFALHLAVILALAIFKGIPAVAQGGIDQVDVDPAGGSETPVNDGDNPIPLVLSLGVVMVLGAFLSTVWVKVLVSHGESVVRCTILSTVAWFVLSAVAAALLGQSGGAVALLVLAGIAYWYYVLINSHIEFAGKNLKVACSAVLAMPGTVTVAVTLLTVQALWCMIWGLAMXXXXXXXXXXMLGVATNFSAPITAADGTVYDADDCTTYETQRPNPTFSAACTGYYGGGTCFKCVCGGATVYDDAECRSERVSAGVYALMLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIWGCGVIANISHCTTAGAVAAWWFAGRNGPAADASSPVTASLRRACTTXXXXXXXXXXXXXXXXXXXXXXXXLRRSRRGMGALWAAAAECLAHAAERVVRVFSRYALVHAAVYGTTLPVAGSEVEVESNLXXXXXXXXXXXXXXXXXXXXXXXXXXXSERVXXXXXXXXXXXXXXXXXXXXXXXXXVEVESNLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXMCELVLAGAACLTAAHGRRAHRQSSPKVWALFKRRGWSAIVNDQLCDNALALACAVVAALCGLAGXXXXXXXXXXXXXXXXXASFGVLMGYNLAAVAVSVVILMSRTFDHLNE 666

[Close]

BLAST of jgi.p|Trimin1|350504 vs. uniprot
Match: A0A7S1CLT9_9STRA (Choline transporter-like protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CLT9_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.780e-5
Identity = 41/129 (31.78%), Postives = 54/129 (41.86%), Query Frame = 1

Query:  991 LIWGCGVIANISHCTTAGAVAAWWFAGRNGPAADASSPVTASLRRACTTXXXXXXXXXXXXXXXXXXXXXXXXLR---RSRRGMGALWAAA-AECLAHAAERVVRVFSRYALVHAAVYGTTLPVAGSEV 1365
            L WG  VI NI HCT AG V +WWFAG        + P   +L+R+CTT                             R R G GA +      C+    ER+V  F+++A  +  +YG     AGS V
Sbjct:  299 LFWGQQVIQNIVHCTIAGTVGSWWFAGDT-----VAKPTWGALKRSCTTSLGSIAFGSLIVAIIKTLRALARNAENEARKRGGAGAAFVLCFVRCMLDCLERLVEYFNKWAFCYVGIYGKDFRSAGSAV 422

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350504 vs. uniprot

BLAST of jgi.p|Trimin1|350504 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YM59_9STRA	0.000e+0	100.00	Choline transporter-like protein n=1 Tax=Tribonema...	[more]
A0A7S1CLT9_9STRA	1.780e-5	31.78	Choline transporter-like protein n=1 Tax=Bicosoeci...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_64	contig	Contig_64:728444..737002 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350504\|estExt_Genemark1.C_Ctg_640092
Description	PNS1. Source PGD
COG category	I
Max annot lvl	121069\|Pythiales
EggNOG OGs	KOG1362@1\|root,KOG1362@2759\|Eukaryota,1MB8C@121069\|Pythiales
Evalue	2.43e-16
Seed ortholog	42099.EPrPV00000013754
Hectar predicted targeting category	other localisation
TranscriptId	350826
Track	FilteredModels1
ProteinId	350504

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350504	gene_10158	Tribonema minus UTEX_B_3156	gene	Contig_64 728444..737002 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350504	Trimin1\|350504\|estExt_Genemark1.C_Ctg_640092	Tribonema minus UTEX_B_3156	polypeptide	Contig_64 728444..737002 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_10158_1	exon_10158_1	Tribonema minus UTEX_B_3156	exon	Contig_64 728444..728492 +
exon_10158_2	exon_10158_2	Tribonema minus UTEX_B_3156	exon	Contig_64 728562..728783 +
exon_10158_3	exon_10158_3	Tribonema minus UTEX_B_3156	exon	Contig_64 729034..729281 +
exon_10158_4	exon_10158_4	Tribonema minus UTEX_B_3156	exon	Contig_64 730367..730477 +
exon_10158_5	exon_10158_5	Tribonema minus UTEX_B_3156	exon	Contig_64 730629..730661 +
exon_10158_6	exon_10158_6	Tribonema minus UTEX_B_3156	exon	Contig_64 731495..731736 +
exon_10158_7	exon_10158_7	Tribonema minus UTEX_B_3156	exon	Contig_64 731834..731875 +
exon_10158_8	exon_10158_8	Tribonema minus UTEX_B_3156	exon	Contig_64 732135..732176 +
exon_10158_9	exon_10158_9	Tribonema minus UTEX_B_3156	exon	Contig_64 732858..733018 +
exon_10158_10	exon_10158_10	Tribonema minus UTEX_B_3156	exon	Contig_64 733987..734198 +
exon_10158_11	exon_10158_11	Tribonema minus UTEX_B_3156	exon	Contig_64 734237..734344 +
exon_10158_12	exon_10158_12	Tribonema minus UTEX_B_3156	exon	Contig_64 734421..734501 +
exon_10158_13	exon_10158_13	Tribonema minus UTEX_B_3156	exon	Contig_64 734540..734647 +
exon_10158_14	exon_10158_14	Tribonema minus UTEX_B_3156	exon	Contig_64 735558..735638 +
exon_10158_15	exon_10158_15	Tribonema minus UTEX_B_3156	exon	Contig_64 736619..736837 +
exon_10158_16	exon_10158_16	Tribonema minus UTEX_B_3156	exon	Contig_64 736961..737002 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_10158	CDS_10158	Tribonema minus UTEX_B_3156	CDS	Contig_64 728444..728492 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_64:728444..737002+
coding sequence from alignment at Contig_64:728444..737002+

spliced messenger RNA

>mRNA_10158 ID=mRNA_10158|Name=jgi.p|Trimin1|350504|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2001bp|location=Sequence derived from alignment at Contig_64:728444..737002+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAATCCTGTCGACGACAATCTCCAAGATGAGTTCGACTTCGAGGCAGG
GGCTCCCTATCCTCCCAAACCCAGCGCCGACAGCGCTTCAACTACGTACA
GGGACGCCTTCTTCGCTGTGATATTTGCGCTGCACCTGGCTGTCATACTG
GCGCTGGCGATATTTAAAGGCATACCCGCGGTGGCGCAGGGCGGCATCGA
TCAAGTCGACGTGGACCCCGCCGGAGGCTCCGAGACACCTGTCAACGACG
GCGACAATCCGATACCGCTCGTGCTGTCGCTCGGCGTCGTCATGGTCCTC
GGCGCGTTCCTGAGCACAGTCTGGGTAAAGGTCCTCGTGAGCCACGGCGA
GAGCGTCGTGCGCTGCACCATACTGTCCACGGTGGCGTGGTTCGTGCTGA
GCGCAGTGGCGGCGGCGCTGCTGGGCCAGAGCGGCGGCGCGGTGGCGCTG
CTCGTCCTCGCGGGCATCGCGTACTGGTACTACGTGCTCATCAACAGCCA
CATCGAGTTTGCGGGCAAGAACCTGAAGGTGGCGTGCTCAGCGGTGTTGG
CGATGCCTGGGACAGTTACAGTTGCGGTGACGCTCCTCACAGTACAGGCA
CTGTGGTGCATGATCTGGGGGCTGGCGATGGCGCTGTGGTGCATGGTCTG
GGGGCTGGCGATGCTAGGCGTAGCCACCAACTTCTCCGCCCCCATCACCG
CCGCCGACGGCACGGTCTACGACGCCGACGACTGCACGACGTATGAGACG
CAGCGGCCGAACCCCACCTTCAGCGCCGCGTGCACGGGGTACTACGGCGG
GGGCACGTGCTTCAAGTGCGTGTGCGGCGGCGCGACGGTGTACGACGATG
CCGAGTGCCGCAGCGAGCGCGTGAGCGCCGGCGTGTACGCGCTGATGCTG
CTCAGCGAGCGCGTGAGCGCCGGCGTGTACGCGTTGATGCTCCTCAGCGA
GCACGTCAGCGCCGGCGTGTACGCGCTGATGCTGCTCAGCCTGATCTGGG
GCTGCGGCGTGATCGCCAACATATCGCACTGCACGACCGCGGGCGCGGTC
GCGGCGTGGTGGTTTGCGGGACGGAATGGTCCCGCCGCTGACGCGTCATC
GCCCGTAACTGCCAGCCTGCGAAGGGCCTGTACCACATCGCTCGGCACCG
TGTGCCTGGCAGCACTAGCAGCGGCAGTAGCGCGCCTGCTGGCGGCGGCG
GCGACGCGGCTGCGGCGCTCGCGGCGCGGCATGGGCGCGCTGTGGGCGGC
GGCGGCGGAGTGCCTCGCGCACGCCGCCGAGCGCGTGGTGCGCGTGTTCA
GCCGCTACGCGTTAGTTCACGCCGCAGTCTACGGCACGACACTGCCGGTG
GCGGGCAGCGAGGTTGAAGTTGAAAGCAACCTCGTGGAGCGCGTGGTGCG
CGAGTTCAGCCGCTACGCGCTGGTTCACGCCGCCGTGTACGGCACGACGC
TGCCAGTCGCGGGCAGCGAGCGCGTGGTGCGCGTCTTCAGCCGCTACGTG
TTAGTTCACGCCGCAGTCTACGGCACGACACTGCCGGTGGCGGGCAGCGA
GGTTGAAGTTGAAAGCAACCTCGTGGAGCGCGTGGTGCGCGAGTTCAGCC
GCTACGCGCTGGTTCACGCCGCCGTTTACGGCACACCGCTGCCGGTCGCG
GGTAGCGAGATGTGCGAACTCGTCCTCGCTGGCGCCGCGTGCCTCACGGC
TGCGCATGGCCGGCGCGCTCACAGGCAGAGCTCTCCGAAGGTCTGGGCGC
TGTTCAAGCGGCGCGGCTGGAGCGCCATCGTCAACGACCAGCTCTGCGAC
AACGCGCTGGCGCTCGCGTGCGCCGTCGTCGCGGCGCTGTGCGGCCTCGC
CGGCGCCGCCGCGGGCGCGCTGTGCGGCATGAGCGGTCTGCTGACCGCGC
TGCTCGCCTCCTTCGGCGTGCTCATGGGGTACAACCTGGCCGCCGTGGCC
GTCAGCGTGGTGATCCTTATGAGTCGAACGTTTGACCACCTAAATGAGTA
G

protein sequence of jgi.p|Trimin1|350504

>Trimin1|350504|estExt_Genemark1.C_Ctg_640092 ID=Trimin1|350504|estExt_Genemark1.C_Ctg_640092|Name=jgi.p|Trimin1|350504|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=667bp
MNPVDDNLQDEFDFEAGAPYPPKPSADSASTTYRDAFFAVIFALHLAVIL
ALAIFKGIPAVAQGGIDQVDVDPAGGSETPVNDGDNPIPLVLSLGVVMVL
GAFLSTVWVKVLVSHGESVVRCTILSTVAWFVLSAVAAALLGQSGGAVAL
LVLAGIAYWYYVLINSHIEFAGKNLKVACSAVLAMPGTVTVAVTLLTVQA
LWCMIWGLAMALWCMVWGLAMLGVATNFSAPITAADGTVYDADDCTTYET
QRPNPTFSAACTGYYGGGTCFKCVCGGATVYDDAECRSERVSAGVYALML
LSERVSAGVYALMLLSEHVSAGVYALMLLSLIWGCGVIANISHCTTAGAV
AAWWFAGRNGPAADASSPVTASLRRACTTSLGTVCLAALAAAVARLLAAA
ATRLRRSRRGMGALWAAAAECLAHAAERVVRVFSRYALVHAAVYGTTLPV
AGSEVEVESNLVERVVREFSRYALVHAAVYGTTLPVAGSERVVRVFSRYV
LVHAAVYGTTLPVAGSEVEVESNLVERVVREFSRYALVHAAVYGTPLPVA
GSEMCELVLAGAACLTAAHGRRAHRQSSPKVWALFKRRGWSAIVNDQLCD
NALALACAVVAALCGLAGAAAGALCGMSGLLTALLASFGVLMGYNLAAVA
VSVVILMSRTFDHLNE*

mRNA from alignment at Contig_64:728444..737002+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_10158 ID=mRNA_10158|Name=jgi.p|Trimin1|350504|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8559bp|location=Sequence derived from alignment at Contig_64:728444..737002+ (Tribonema minus UTEX_B_3156 )
ATGAATCCTGTCGACGACAATCTCCAAGATGAGTTCGACTTCGAGGCAGG
TGACCTGATGCAGCCTTTGGCTCCTGGCCTCAATAATGCCCACAATGACT
ACCATCATAATCGACAAGGGGCTCCCTATCCTCCCAAACCCAGCGCCGAC
AGCGCTTCAACTACGTACAGGGACGCCTTCTTCGCTGTGATATTTGCGCT
GCACCTGGCTGTCATACTGGCGCTGGCGATATTTAAAGGCATACCCGCGG
TGGCGCAGGGCGGCATCGATCAAGTCGACGTGGACCCCGCCGGAGGCTCC
GAGACACCTGTCAACGACGGCGACAATCCGATACCGCTCGGTGGGTCTGT
GCTGCCCTGGTGCCTGCCTGTATGTGGACTTGTTCTCTGCCATGTGACCA
GCGGCAGCAGTTGCTGCTGCATCACTGACAGGCGGCAAGCAAGCAGAGGG
AGGATGGCATGCAGCAGCAGTACTGTCAGGGTTTTGCTAGCCTCGTCAAC
GTATCGAAGAAGCATGTGCACGCCACACTCCACACACACACCTCTACCAC
CACACCTCACGCTGCGCTCTGCTTCCTCGCGCCTGAGCAGTGCTGTCGCT
CGGCGTCGTCATGGTCCTCGGCGCGTTCCTGAGCACAGTCTGGGTAAAGG
TCCTCGTGAGCCACGGCGAGAGCGTCGTGCGCTGCACCATACTGTCCACG
GTGGCGTGGTTCGTGCTGAGCGCAGTGGCGGCGGCGCTGCTGGGCCAGAG
CGGCGGCGCGGTGGCGCTGCTCGTCCTCGCGGGCATCGCGTACTGGTACT
ACGTGCTCATCAACAGCCACATCGAGTTTGCGGGCAAGGTGAGAGTGCCT
GGGTGGTGTGGACGCGCCTCCCAATCGCTGACATGTGCTCAAAAACAGCC
ACATCACTGGTACTACGATGCTCCTCAACAGCCACATCGAGCTTGCGGGC
AAGGTGAGAGCGCCTGGGCGGTATAGGGGTGCGCGTTCACAAACTTCAAC
TGCTGTTTGGTACTAAGCAACAGCCACATGGGGTTTGCAGGCAAGATCAG
CTTTGCAGCGGGTGGTGGCACTCTCTTTGAGTGCAAACCTCACCTGGTAC
CATGTGCTCATCACCAGTTACAGTGAGTGGCAGGCAAGGCCCACCAACTT
CAGCTCAATGTCTAGTGCTTGCTCTTCGATAGCACATTGAGTTTGCGGGC
AAGGCGAGGGCACACGCTGCTGAGCGTTGCTGCACACCCTCAGGGGGGAG
TCGGGGGGGGGCAGCAGCACTTCAGCTGAGCATCGACTTCAACTTGTGCA
TTGCGAACACGCATACGCTATTTGTGTGCTGTATGTGTGTAATGGCTACG
ATATATCTGGTGATGGCAATGTTGGGGCAAACAGACCGTAACGCCAGCGC
GTGTGCTATGAGGCTGGCGTGCACACCTGTCCACATGTATCGTTCACCTT
TGAAAACCTTCGTGCGGAACTGCTGTCAAGCACGCATTGGACCTTCGGCC
GACGTGCTGGTGGCTGTCCCACTGTATGCCTTGGACTGTAATGATTGTAT
TCACAGATGCTCTCTGAGACAGCAGAAGCACCGCACCACTCACGACTGCC
ACTTGCCCAGGTACGATGCGTGCGCTGCAACATGTGTTGGTATGCTTACG
TGGCGCATGCAGGATCTCAGAGCAACGGACCATGTCTGCAGGCACGGAGC
CTCAGCAGCATCTTGAAGCGCTCATCTTTCAGCAGCATCTTGAAGCACTC
ATCTTTTCATTCTCGCATCGACTTTTCAGCGATGCACAAATATTTGCTGA
CCTGAAATTGACATTGACGGCGGTCATCCCATTATCAAAGTTTGTCAGCA
CACTTACGGAATCAACCCCTACAAAGCCATGTGCCTCGTTGTGCTTTGTT
GTATGCTCTCACCGCGCTTGCAGAACCTGAAGGTGGCGTGCTCAGCGGTG
TTGGCGATGCCTGGGACAGTTACAGTTGCGGTGACGCTCCTCACAGTACA
GGCACTGTGGTGCATGATCTGGGGGCTGGCGATGGTGCGTCCATACTTGA
ACTTGGTCACGTTGAAGTACTGGCCGCAGCAGAAAGTTGCAGCGCTCGTG
TGTCGCGCTATGGTGCACAATGAATGGTGAATCTACTCCTGCCATGTTGA
CAGTTACAGTTGTGGTGACGCTCCTCGCGGTACAGGCGCTGTGGTGCATG
GTCTGGGGGCTGGCGATGGTGCGTCCAAGCTTGAACTTGATGATGTTGAA
GTGCTCATCGCAGCAGTAAGCTGCACTGCTAGTGTAGGCGCTATGGCGCT
GTGGTGCATGATTGCATGTAGCCCTGAACGTGCTGAACTTGAAGTACTAT
CTGAAGAAGAAGGCAGTTGCAGTTGCACAGCTCCGTACGCGCTGACCATG
CAATTGTACCACTGGTACTCCCGCCAGCAAGAAGCAGCGCGCGCGCGCTT
CTGCAGTGTTTGCAGCATGCGTTGGGCCACTAGGGTGAGAACTAAGTCAG
GTTGAGTTTGGCGCAATGCCGTGATGCGCTTCAAGTTCTCGCTGCTTCTC
ATTCTGCGGCACATGTGGTGCACGATCTCGGGGCTGACCGTGGCGCATCC
ATTGATTGCGCACACACATTACTGGAGTATTGCACGTGACATCTTTGAGT
TCAGACGGCGGCGGCCAGCCCGAGAGACCGTGCCGTACAAGCTGATCCAG
TCGGCGCCGATGCCACCGTGAGGCGTGTGCGACTGCACACACACACACAC
CACAAGTGACAGCCATGATGTCATCGCATGACTCATCAAGGCACGTATGC
ATGTGCATACATGCATGCGTACGCACAAACGTACATGCACACATATCATA
CATCCATCAATCCACAGCATCATCATGACACGCAACTGTCAAGCCTCCGA
TACGAGCCCATCTCCCACATGCCCCCCCCCCCCCCCTCCCCCACGCGCCT
TCAACCTCCCCTCTCCCCCGCCCACCGCAGCTCCCTCATGCCCTTCCCCC
CCCCCCCACACACACACCCCTTAACCCCCCCTCCCTCCCCCCCCCCTGCA
GCTAGGCGTAGCCACCAACTTCTCCGCCCCCATCACCGCCGCCGACGGCA
CGGTCTACGACGCCGACGACTGCACGACGTATGAGACGCAGCGGCCGAAC
CCCACCTTCAGCGCCGCGTGCACGGGGTACTACGGCGGGGGCACGTGCTT
CAAGTGCGTGTGCGGCGGCGCGACGGTGTACGACGATGCCGAGTGCCGCA
GCGAGCGCGTGAGCGCCGGCGTGTACGCGCTGATGCTGCTCAGGTCAGTG
ACAGATTCAGTACTTTGTACCTGTACCCAGTGCGTTGGATCATCTGGTCT
CATATGAGTGAGAGGGGGCGCACGGCGTAGAGTGCCGCAGCGAGCGCGTG
AGCGCCGGCGTGTACGCGTTGATGCTCCTCAGGTCAGTGACAGATTCAGT
ACTTTGTACCTGTACCCAGTGCGTTGGATCATCTGGTCTCATATGAGTGA
GAGGGGGCGCACGGCGTAGAGTGCCGCAACGAGCGCGTGAGCGCCGGCGT
GTACGCATTGATGCTGCTGAGGTCAGTGACGGACCGAGCTTTTTGTACCT
GCACCAGTGCATTGGATTCTCGTCTTGTATGAATTGGGGGGAGGGGGGGG
GGGGAGGGTAATCATGAAGCGCGGAGCGCAGAGTGCCGCAGCGAGCACGT
CAGCGCCGGCGTGTACGCGCTGATGCTGCTCAGGTCAGTGTGTCTTACAC
GGACCGATCTTGATCGCAGCGCTCGTTCTTGTGCGGCTGGCCCTTGTCAC
CTGCGTGCGGGGAGTAAAGTAACGAAGCGCAGGATGCACACTGCCACAGC
GAGCGCTTGAGCGCTTACGCGTTGATGCTCCTAAGGTCAGTGACAGACAG
TGCTTTCCCTGCGCCCATAGTCATCTGTACGCGCGCTGCCGCGCACGCAC
TGATGCCCCTCAGGTCCATGTGCACCCATCTAAGTGGGCTCCTAGGTCTG
TGCGCGACCCTGTAAGTAGGTGAGGTTGGTAGTTGGACGCTCGCTGCGTC
ACTCGCGCGAGTGCTGCTTTGCACACGCGTTAATGGTGGTCCTGAGGTCA
GACGCTTTCTCGCGTGCGAGGCCGCCGTTCGCCAGCAACATGACTTGGCT
GTTGTGCCTATCGTAGCAATACAAAGCAAGAGTCACGCGTGTACCATCTC
TGTACACGTCGCATCATCCACGTGCATCCACTGTACCGCCCGCTACTGCC
TCTAGTGCTTCTGCATGCAACTGAGCAAGCTCCTCTCCTTCAGAACCGCG
CCCTGCTGGCGTTACCCTGCCAATCATGGCTCTGACAGCAATGGACTAGT
CATCTTCACTCCTCTGCATACAGCAGCACTGAGGCATGCGCGCTCCTCAC
ACTCCTCGGCGCAGCCTGATCTGGGGCTGCGGCGTGATCGCCAACATATC
GCACTGCACGACCGCGGGCGCGGTCGCGGCGTGGTGGTTTGCGGGACGGA
ATGGTCCCGCCGCTGACGCGTCATCGCCCGTAACTGCCAGCCTGCGAAGG
GCCTGTACCACATCGCTCGGCACCGGTGAGTCGTCAACTCATTTTGGCGA
GTCATTGAGTCCTGTTGGGCAGACCCGTGATTGTCTGCAACCGCCGTTTG
GCGCAGGGCCTGCCGTGCATCGCATGGCGTGAGTGAGTCATTGAGTCATG
ATGGTGAGAGGGCAAGTCATATGGTGTGGCTGATGCCTCAGTCCTCGAGT
CGTGATCAACCGCCGCGGCGCCGCCCACGGTTGCCAGACTGCGGAGCGCA
TGCACCGCATCGCTCAGCAGAAGTGAGTCATTGAGTTGACTCGTCGCTCT
ACAGTGCTGCATATAACTCACATGTCTGCTCCCTTTCGCTTCGCTCTGCG
GTGTGTCTGTTGCTCACGGCCTACATGGCTAGCGGCACAGGTCCCCCAGC
ACTTGCTCGCCTGCTTGTTGTGCGCGTACTCGCTGTACACCTCCAAAGTA
CCTCCGTAGCAAGTGTGCATATCTGTAGCGTGGAATGTTGCGCGTGCAGT
GTGTTGCAGCACCTCTGAAAGGGCGGCTGCCTCCTCGTGACACATGCACT
CGCAGCCTCGAAACACAATGCTAGCAGCAGCTGGAACTTCGGGTTAGGGT
TAGGGTTCGGGTTAGCCTCAATGAAGGCACCGTCGCATCTCATTGTCTGA
GTCTACTTTACACCGCTTGCATTTTCACTAATCAAGGCACACAGCAGCAT
CAAGCTCTGTGAGTATGCCGCGACACAGGCGCGCGCGCTGGGCGCATTTT
TCTCTGGCAGGTCATCCACTTGCCACCACTCAGCATCGCCATGGCGCCGT
CTCATGATGATCGCAGTGCCTGGCAGCGCTGGCGGCAGCAATCGCGCGCC
TGCTGGCGGTGGCGGCAGCACCGCAACTGCATCTGCAGAACAGCCACACC
CGCCGCCACCATGACCTGCCGCAACTCTCACCGGCGGAATCGCTCATCCC
CCCTCTCCCCCCCCCCCTTCCCCCTCACCCTCCGCTGTGGCAGTGTGCCT
GGCAGCACTAGCAGCGGCAGTAGCGCGCCTGCTGGCGGCGGCGGCGACGC
GGCTGCGGCGCTCGCGGCGCGGCATGGGCGCGCTGTGGGCGGCGGCGGCG
GAGTGCCTCGCGCACGCCGCCGAGCGCGTGGTGCGCGTGTTCAGCCGCTA
CGCGTTAGTTCACGCCGCAGTCTACGGCACGACACTGCCGGTGGCGGGCA
GCGAGGTGGGGAGACGCGAAATGTGATACTTGAAGTACGTCAGGTTGAAG
TTGAAAGCAACCTCGTGGAGCGCGTGGTGCGCGAGTTCAGCCGCTACGCG
CTGGTTCACGCCGCCGTGTACGGCACGACGCTGCCAGTCGCGGGCAGCGA
GGTGGGTGACACTTGAAGTACGCATATGCGATACTTCAAGTATGTCAGGC
AGACGTTGAAAGAAACTCGCCGCGGAGCGCGTGGTGCGCGTCTTCAGCCG
CTACGTGTTAGTTCACGCCGCAGTCTACGGCACGACACTGCCGGTGGCGG
GCAGCGAGGTGGGGAGACGGGAAATGCGATACTTGAAGTACGTCAGGTTG
AAGTTGAAAGCAACCTCGTGGAGCGCGTGGTGCGCGAGTTCAGCCGCTAC
GCGCTGGTTCACGCCGCCGTTTACGGCACACCGCTGCCGGTCGCGGGTAG
CGAGGTGGGTGGCCGACAGTACACAAAATTTGGTACTTCACGTGTGAAAA
ATGTGATACTTGAAGCACACCTAAGCTGAAGTTGAAAGAAAAACGCGGTT
CTGTGGTTGGATTATGGAAGGCCCGCGTACGGAGACAAGTACATCAAGCT
GAAGTTGGCCGGAAAATGTGGTACTGTGGTCAGATCGTGGAAGGTCCGCG
TTCAGAGACGACAGGAGAGGGAGGCTCTCCTTTAAGCTCAACAGAGCGTT
TGGTTCCCTGCGAGGGAGGAACCACGCAGTATAGCAACGCTGTATATGAG
TCGGGAAACCTCAAATGCGCTTCTCGATGCTGGCACTGTGGGAAATCAGC
ACCGGTGCACGCAAGCGGCGTTTCTCACCTTCATCCACACCTCCCAAGTA
GCTGCCACTGTAGAGTCGTGGGCCGAAATGCACATCGTGCTGCCACGAGC
ATGCGTGACAGCACACACAGAGCGTAGGCACCGGGCACGTCACACGCGAG
GGATGAAAGCAGCACTGCACCTGGCGGCAGGCTGAGCGCGTCCATGATTA
GCAGCTTCAGCGGATGTCGATAAGCGGGCCTATGCTAGCAAGAGCGCCAG
GGTCAGAGGCGAGGCGCACGACGCACCTGACGCTTCATCTTTGGAGAGCG
CTGCCGTGAGCGCGCCACTCATACGCAGTGGTGAGGTGCGCATCGCTAGC
GAGGGCGGCATTTTGCGTCCGACGACGCGGAGAAGTAGGTAGGCCAGCAG
CAGCGGCGGCGGCAGCAGCAGCCGCAGCCGCCGCAGCAGCAGAAACAGCT
GCACCAATGCAAGAAGCCCAGCAAACAAAGGGCAAGAGAATATACGCAAA
ACCTCCGCCACTGCTGGCGTTGCCACCTCCGCCGCCGCTGCTGCCGGCTC
CTCCGCTTGGTCAGATGTGCGAACTCGTCCTCGCTGGCGCCGCGTGCCTC
ACGGCTGCGCATGGCCGGCGCGCTCACAGGCAGAGCTCTCCGAAGGTGGA
GCTTGCACATCTCATGAGCCTCGCCTCTGATTCTGGCCCTCTTGCCGCGC
TCCCGTCCGTCGACACCTGCTGAAACCGCCATTCAGGGACGAACGCAGCC
CCCCGCCACTGGCAGTGCTGCTCCCATATTCGTTTTCAAGTGCTTGGCGC
CCGCCCCTGTGTCTGCCATCGAGCATGCTCGTTGCAGCACGATGTGCAGC
TTTGCCCACGACTCCGCGGTGGCAGCTTCTAGGCAGGGCGTAATTGAAGA
GACAACCTGCAGCGCGCACGCACGCACGCATGAACTGCCACGGAATAGTG
ATCGCACAGACCAGAGCATAATCAGGATGGAACGGACAGATGGAGGCCAA
ATGCTGCATTCGGCTCAGATGGTTGGCCTACGGTGATGGCCAGCAAACAC
ACACTCCACAAACTGGAGCATGGGAGCGTTTTGTTGACACAGCCGCTGCA
GCTTCGTCAACCGCGACAGCTTATCCCTGGCCAAAACTGTTCAGAAGTAT
TGGGGAACCGAGCGATGACCGCTTGCCTTGCGACGTGTGCGCGCCTGCCG
CAGTCTACCATGCTTGCGGCAGCCAACCTGGCCGCGATGTCAGTGCGCAC
ATCTGCACAGGCCTGGGCGCTATTCCAGTGACGAGTCACCGCTCAACCTT
AATCCGAACTTGAACCTAGTCTAATTCAATCTTGAATTCCTTGGGTGATT
TGAGCTAGAAACCGAGATTGCACATGTGCTTGCGCGGCAACTCGCATCGA
GCACTGCTGCGGTCCATCACCTGCGCCAGCGCTACCAGAAGCGCACGCAC
ACCATCACTTGATTCCCACATGCGCTTGATTCCGCAAGCATCAGCATACA
GACTGGCACGCGCACGCACACACACGCGCGTGCCTGCAGCTCATCCGCGC
GCTGCGCCACCCCCACCCATGCGCACTGCTGCTGCTGCTGCTGCCACTGC
CGCTGCCGCTGCCGCTGCTGCGCAGGTCTGGGCGCTGTTCAAGCGGCGCG
GCTGGAGCGCCATCGTCAACGACCAGCTCTGCGACAACGCGCTGGCGCTC
GCGTGCGCCGTCGTCGCGGCGCTGTGCGGCCTCGCCGGCGCCGCCGCGGG
CGCGCTGTGCGGCATGAGCGGTCTGCTGACCGCGCTGCTCGCCTCCTTCG
GCGTGCTCATGGGGTACAACCTGGCCGCCGTGGCCGTCAGCGTGGTGCGT
CTCCTCTTGCGGTTGGTGCACTTGAAGTTGTGAACGTTTTGCTCACCGCG
CTGCTCGCCTCCTCTGGCGTGCTCATGGCGTACAATCTGGCCGCCATCGC
TGCGTCGCCTCTTGCAGGTGATCCTTATGAGTCGAACGTTTGACCACCTA
AATGAGTAG

Coding sequence (CDS) from alignment at Contig_64:728444..737002+

>mRNA_10158 ID=mRNA_10158|Name=jgi.p|Trimin1|350504|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2001bp|location=Sequence derived from alignment at Contig_64:728444..737002+ (Tribonema minus UTEX_B_3156 )
ATGAATCCTGTCGACGACAATCTCCAAGATGAGTTCGACTTCGAGGCAGG
GGCTCCCTATCCTCCCAAACCCAGCGCCGACAGCGCTTCAACTACGTACA
GGGACGCCTTCTTCGCTGTGATATTTGCGCTGCACCTGGCTGTCATACTG
GCGCTGGCGATATTTAAAGGCATACCCGCGGTGGCGCAGGGCGGCATCGA
TCAAGTCGACGTGGACCCCGCCGGAGGCTCCGAGACACCTGTCAACGACG
GCGACAATCCGATACCGCTCGTGCTGTCGCTCGGCGTCGTCATGGTCCTC
GGCGCGTTCCTGAGCACAGTCTGGGTAAAGGTCCTCGTGAGCCACGGCGA
GAGCGTCGTGCGCTGCACCATACTGTCCACGGTGGCGTGGTTCGTGCTGA
GCGCAGTGGCGGCGGCGCTGCTGGGCCAGAGCGGCGGCGCGGTGGCGCTG
CTCGTCCTCGCGGGCATCGCGTACTGGTACTACGTGCTCATCAACAGCCA
CATCGAGTTTGCGGGCAAGAACCTGAAGGTGGCGTGCTCAGCGGTGTTGG
CGATGCCTGGGACAGTTACAGTTGCGGTGACGCTCCTCACAGTACAGGCA
CTGTGGTGCATGATCTGGGGGCTGGCGATGGCGCTGTGGTGCATGGTCTG
GGGGCTGGCGATGCTAGGCGTAGCCACCAACTTCTCCGCCCCCATCACCG
CCGCCGACGGCACGGTCTACGACGCCGACGACTGCACGACGTATGAGACG
CAGCGGCCGAACCCCACCTTCAGCGCCGCGTGCACGGGGTACTACGGCGG
GGGCACGTGCTTCAAGTGCGTGTGCGGCGGCGCGACGGTGTACGACGATG
CCGAGTGCCGCAGCGAGCGCGTGAGCGCCGGCGTGTACGCGCTGATGCTG
CTCAGCGAGCGCGTGAGCGCCGGCGTGTACGCGTTGATGCTCCTCAGCGA
GCACGTCAGCGCCGGCGTGTACGCGCTGATGCTGCTCAGCCTGATCTGGG
GCTGCGGCGTGATCGCCAACATATCGCACTGCACGACCGCGGGCGCGGTC
GCGGCGTGGTGGTTTGCGGGACGGAATGGTCCCGCCGCTGACGCGTCATC
GCCCGTAACTGCCAGCCTGCGAAGGGCCTGTACCACATCGCTCGGCACCG
TGTGCCTGGCAGCACTAGCAGCGGCAGTAGCGCGCCTGCTGGCGGCGGCG
GCGACGCGGCTGCGGCGCTCGCGGCGCGGCATGGGCGCGCTGTGGGCGGC
GGCGGCGGAGTGCCTCGCGCACGCCGCCGAGCGCGTGGTGCGCGTGTTCA
GCCGCTACGCGTTAGTTCACGCCGCAGTCTACGGCACGACACTGCCGGTG
GCGGGCAGCGAGGTTGAAGTTGAAAGCAACCTCGTGGAGCGCGTGGTGCG
CGAGTTCAGCCGCTACGCGCTGGTTCACGCCGCCGTGTACGGCACGACGC
TGCCAGTCGCGGGCAGCGAGCGCGTGGTGCGCGTCTTCAGCCGCTACGTG
TTAGTTCACGCCGCAGTCTACGGCACGACACTGCCGGTGGCGGGCAGCGA
GGTTGAAGTTGAAAGCAACCTCGTGGAGCGCGTGGTGCGCGAGTTCAGCC
GCTACGCGCTGGTTCACGCCGCCGTTTACGGCACACCGCTGCCGGTCGCG
GGTAGCGAGATGTGCGAACTCGTCCTCGCTGGCGCCGCGTGCCTCACGGC
TGCGCATGGCCGGCGCGCTCACAGGCAGAGCTCTCCGAAGGTCTGGGCGC
TGTTCAAGCGGCGCGGCTGGAGCGCCATCGTCAACGACCAGCTCTGCGAC
AACGCGCTGGCGCTCGCGTGCGCCGTCGTCGCGGCGCTGTGCGGCCTCGC
CGGCGCCGCCGCGGGCGCGCTGTGCGGCATGAGCGGTCTGCTGACCGCGC
TGCTCGCCTCCTTCGGCGTGCTCATGGGGTACAACCTGGCCGCCGTGGCC
GTCAGCGTGGTGATCCTTATGAGTCGAACGTTTGACCACCTAAATGAGTA
G