Trimin1|350486|estExt_Genemark1.C_Ctg_640050 (polypeptide) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A836C9E5_9STRA (CHRD domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9E5_9STRA) HSP 1 Score: 213 bits (541), Expect = 5.860e-70 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
Query: 1 TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 104
TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL
Sbjct: 1 TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 104
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835YML2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YML2_9STRA) HSP 1 Score: 175 bits (444), Expect = 7.130e-49 Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = 0
Query: 1 TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHT 92
TDGPGDATGQGTAKIVLQGQKLCFVLTTNL+GIVAGHIHKGA G+DGDVFIDLLG LADL KNPLKAC+QLS AEAQALL DPAGYY+NVHT
Sbjct: 481 TDGPGDATGQGTAKIVLQGQKLCFVLTTNLQGIVAGHIHKGAAGIDGDVFIDLLGGLADLTKNPLKACVQLSAAEAQALLADPAGYYINVHT 572
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A836C9W3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W3_9STRA) HSP 1 Score: 141 bits (355), Expect = 8.480e-37 Identity = 64/99 (64.65%), Postives = 78/99 (78.79%), Query Frame = 0
Query: 6 DATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 104
D GQGTAK + G+ LCF + TNL+GIVAGHIH+GA GVDGDV++DL G +ADL NPL+AC+ L+ A+A+AL+ P YYVNVHTDQ P GAIRSQL
Sbjct: 268 DPEGQGTAKFAIAGRTLCFTMKTNLKGIVAGHIHQGAAGVDGDVYVDLFGGIADLTANPLQACITLTYAQAKALVKTPTDYYVNVHTDQFPDGAIRSQL 366
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835YYA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA4_9STRA) HSP 1 Score: 107 bits (268), Expect = 4.890e-27 Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 0
Query: 11 GTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHT 92
G + + G+ LCF + TNL+GIVA HIH+GA GVDGDV++DL G +ADL NPL+AC+ L+ A+A+AL+ P YYVNVHT
Sbjct: 135 GHRQFAIAGRTLCFTMKTNLQGIVAEHIHEGAAGVDGDVYVDLFGGIADLTANPLQACITLTHAQAKALVKTPTDYYVNVHT 216
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835YI34_9STRA (CHRD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI34_9STRA) HSP 1 Score: 100 bits (249), Expect = 9.610e-25 Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 0
Query: 2 DGPGDATGQGTAKIVL-QGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQ-ALLTDPAGYYVNVHTDQHPGGAIRSQL 104
D GD G GTA + +CF + T L+G+ AGHIHKG VG +GDV +DLL LAD NPL+ C+ L A+L +PAG+YVN+H P GAIR Q+
Sbjct: 59 DPTGDPNGGGTATFFTPDDETICFSIDTTLDGVTAGHIHKGVVGTNGDVVVDLLSVLADTKVNPLEGCVDLGGQRPLLAILENPAGFYVNIHNIDFPKGAIRGQM 163
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A397NQ64_9SPHN (CHRD domain-containing protein n=1 Tax=Hephaestia caeni TaxID=645617 RepID=A0A397NQ64_9SPHN) HSP 1 Score: 83.2 bits (204), Expect = 3.350e-18 Identity = 47/105 (44.76%), Postives = 56/105 (53.33%), Query Frame = 0
Query: 3 GPGDATGQGTAKIVLQGQKLCFVLTTNLEGI---VAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 104
GPGD G GT K+ T ++ GI A HIHKGA+GV G + L A K CL + A A A++ DPAGYYVNVHT +P GAIR QL
Sbjct: 39 GPGDPDGTGTVKVTADSATNTVCYTLDVRGISAPTAAHIHKGALGVAGPPVLPL----APPTSGRSKECLSVDKALAAAIIADPAGYYVNVHTADYPKGAIRGQL 139
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A535UIK2_9CHLR (CHRD domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535UIK2_9CHLR) HSP 1 Score: 77.4 bits (189), Expect = 5.920e-16 Identity = 41/103 (39.81%), Postives = 53/103 (51.46%), Query Frame = 0
Query: 4 PGDATGQGTAKIVLQGQKLCFVLTTNLEG--IVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 104
PG + G GTAKI + G LC+ LT N +AGHIH+G G G + + L A C ++ A + +P YYVN+HT HP GAIR QL
Sbjct: 43 PGPSGGAGTAKITIDGTNLCYDLTWNAATGTPIAGHIHQGPKGASGPIVVTLSPTTAH-------TCTTVAPTIASGIAGNPGNYYVNLHTQDHPDGAIRGQL 138
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: UPI001EF6F767 (CHRD domain-containing protein n=3 Tax=Frankia TaxID=1854 RepID=UPI001EF6F767) HSP 1 Score: 80.5 bits (197), Expect = 8.130e-16 Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 0
Query: 5 GDATGQGTAKIVLQGQKLCFVLTTNLEGIVA---GHIHKGAVGVDGDVFIDLLG-ALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 104
GD G TA I LQG ++ F + +GI A GHIH+GA GV+GDV + L G A+ + + A A A AL DPAG+Y+N+HT + PGGA+R QL
Sbjct: 81 GDPDGSATAIIRLQGDRVTFAFSW--KGIGAPTLGHIHQGAAGVNGDVKVALWGTAVPETVTADAGAVTVSDPAIADALRADPAGFYLNLHTQEFPGGAVRGQL 182
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: UPI001B83835D (CHRD domain-containing protein n=1 Tax=Sphingomonadaceae bacterium LXI357 TaxID=2826939 RepID=UPI001B83835D) HSP 1 Score: 76.3 bits (186), Expect = 2.020e-15 Identity = 43/105 (40.95%), Postives = 56/105 (53.33%), Query Frame = 0
Query: 3 GPGDATGQGTAKIVLQGQK--LCFVLTT-NLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 104
GPGD G GTAK+ +C+ LT ++ A HIH+GA GV G + L + K CL + A A++ +P GYYVNVHT +P GAIR QL
Sbjct: 46 GPGDPDGSGTAKVTADATTGTICYELTVQDISQPTAAHIHQGARGVAGPPVLQLKPP----VTGSSKECLDVDKQLAAAIIANPTGYYVNVHTADYPKGAIRGQL 146
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A5C6ULP5_9SPHN (CHRD domain-containing protein n=2 Tax=Sphingorhabdus soli TaxID=2601267 RepID=A0A5C6ULP5_9SPHN) HSP 1 Score: 79.3 bits (194), Expect = 2.700e-15 Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 0
Query: 3 GPGDATGQGTAKIVLQG--QKLCFVLTTNLEGI-VAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 104
GPGD G GTAKI +C+ +T G A H+H+GA GV G + A CL + A A +++ DP+ YYVNVHT +PGGAIR QL
Sbjct: 249 GPGDPDGTGTAKITADATTNTVCYDITVQRIGTPTAAHLHRGAAGVSGPPVVTFKAPTAGATSE----CLSVDKALAASIIADPSNYYVNVHTADYPGGAIRGQL 349 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|350486|estExt_Genemark1.C_Ctg_640050 ID=Trimin1|350486|estExt_Genemark1.C_Ctg_640050|Name=jgi.p|Trimin1|350486|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=104bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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