Trimin1|169526|e_gw1.64.69.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|169526
Unique NameTrimin1|169526|e_gw1.64.69.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length479
Homology
BLAST of jgi.p|Trimin1|169526 vs. uniprot
Match: A0A835YMJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMJ3_9STRA)

HSP 1 Score: 970 bits (2508), Expect = 0.000e+0
Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 0
Query:    1 MRAAAALRDADAKGAYDAFLEDAASCHPEQLLQQLALPWATRAHGSHLSVSSDDVLRRVFNAAFSRIKPYLLADLVRRDPGCCISGDGTFKIAGRVTSSATVLHFILGADHCVVAFAAVKGDGFTPVIPLYMQLRRRLEAMGKLFDVQAVYSDRCCEQRNDPSTAPQAVIFPGCRRVWGDGWHAINTLIEATTRSNHPDLQAFAAAVGKAIRVPHQEDVEALKRLFIDQARQQGQMLHPDVAELRALNRGYAESVRTVGPPGSVIAANLRRVFAKFDKNDGERPDSKAPPERLYRPSGRDKSQRSTEEVFENTIRCADKGCLTDPLPFPRMHTLLRVMPKTKRPIYRSVGQTVKNEALHSKVNKLVDGISKVGADSMNSRLLLRVFAHNRQRDVEWGRCSAHEPCPWITARALCPGAEPPPEPQERMGWDYYRDLCNQQLKDLQDMYDELKHANSKGIESMHMVVRSMVLRKMQAKPV 478
            MRAAAALRDADAKGAYDAFLEDAASCHPEQLLQQLALPWATRAHGSHLSVSSDDVLRRVFNAAFSRIKPYLLADLVRRDPGCCISGDGTFKIAGRVTSSATVLHFILGADHCVVAFAAVKGDGFTPVIPLYMQLRRRLEAMGKLFDVQAVYSDRCCEQRNDPSTAPQAVIFPGCRRVWGDGWHAINTLIEATTRSNHPDLQAFAAAVGKAIRVPHQEDVEALKRLFIDQARQQGQMLHPDVAELRALNRGYAESVRTVGPPGSVIAANLRRVFAKFDKNDGERPDSKAPPERLYRPSGRDKSQRSTEEVFENTIRCADKGCLTDPLPFPRMHTLLRVMPKTKRPIYRSVGQTVKNEALHSKVNKLVDGISKVGADSMNSRLLLRVFAHNRQRDVEWGRCSAHEPCPWITARALCPGAEPPPEPQERMGWDYYRDLCNQQLKDLQDMYDELKHANSKGIESMHMVVRSMVLRKMQAKPV
Sbjct:    1 MRAAAALRDADAKGAYDAFLEDAASCHPEQLLQQLALPWATRAHGSHLSVSSDDVLRRVFNAAFSRIKPYLLADLVRRDPGCCISGDGTFKIAGRVTSSATVLHFILGADHCVVAFAAVKGDGFTPVIPLYMQLRRRLEAMGKLFDVQAVYSDRCCEQRNDPSTAPQAVIFPGCRRVWGDGWHAINTLIEATTRSNHPDLQAFAAAVGKAIRVPHQEDVEALKRLFIDQARQQGQMLHPDVAELRALNRGYAESVRTVGPPGSVIAANLRRVFAKFDKNDGERPDSKAPPERLYRPSGRDKSQRSTEEVFENTIRCADKGCLTDPLPFPRMHTLLRVMPKTKRPIYRSVGQTVKNEALHSKVNKLVDGISKVGADSMNSRLLLRVFAHNRQRDVEWGRCSAHEPCPWITARALCPGAEPPPEPQERMGWDYYRDLCNQQLKDLQDMYDELKHANSKGIESMHMVVRSMVLRKMQAKPV 478          
BLAST of jgi.p|Trimin1|169526 vs. uniprot
Match: A0A836CA97_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA97_9STRA)

HSP 1 Score: 256 bits (654), Expect = 3.330e-76
Identity = 159/416 (38.22%), Postives = 207/416 (49.76%), Query Frame = 0
Query:    1 MRAAAALRDADAKGAYDAFLEDAASCHPEQLLQQLALPWATRAHGSHLSVSSDDVLRRVFNAAFSRIKPYLLADLVRRDPGCCISGDGTFKIAGRVTSSATVLHFILGADHCVVAFAAVKGDGFTPVIPLYMQLRRRLEAMGKLFDVQAVYSDRCCEQRNDPSTAPQAVIFPGCRRVWGDGWHAINTLIEATTRSNHPDLQAFAAAVGKAIRVPHQEDVEALKRLFI---DQARQQGQMLHPDVAELRALNRGYAESVRTVGPPGSVIAANLRRVFAKFDKNDGERPDSKAPPERLYRPSGRDKSQRSTEEVFENTIRCADKGCLTDPLPFPRMHTLLRVMPKTKRPIYRSVGQTVKNEALHSKVNKLVDGISKVGADSMNSRLLLRVFAHNRQRDVEWGRCSAHEPCPW-ITARA 412
            + A A  R ++ K  Y+AF++  A    + +     +PW T   G  L+  S+ V+R +FN AF RI+PYL   L  +  G C+SGDGT +I GR       +HF++  D  VVA+ A   D   P+IPLYM LR   E    L DV+AVY D CC+QR D S  P A IFP    V GDG+H  N  I  TT  +HP    FA  VG+AIR PH  D   + +  +    + R++        AE  A    Y  S+RT   P   IA NLR    K   N G+                     + T E F N I C +KGC T P  F   H LL V  +    +Y S+G T KNEA HSKVN+L+D IS +  D +  RL+L VF HNR RD+   +C    P PW +  RA
Sbjct:   46 LEALARGRQSEGKLRYEAFIQRMA----DTVAPSSFMPWHTLEDGGCLAPPSEKVIRTIFNQAFDRIQPYLQQALQEQSVGICLSGDGTHRIGGRSKGDTAAVHFVMNDDSYVVAYGAAASDSIGPMIPLYMGLRAMAERQNGLSDVRAVYLDTCCDQRLDVSDTPMAHIFPSVSGVSGDGFHLGNR-ITRTTHPHHPAHAQFAFEVGRAIRQPHIPDHTVVAQALLRNPPKGRRRQPCADLASAERLAWADAYKSSIRTQALPAPTIADNLR----KLRDNKGD---------------------QGTLEAFNNAIACCEKGCYTSPFHFAESHKLLYVKKELGIHVYASIGHTGKNEAFHSKVNRLLDYISTISEDQLEKRLMLLVFHHNRGRDIALNKCRDGTPYPWEVNTRA 431          
BLAST of jgi.p|Trimin1|169526 vs. uniprot
Match: A0A6H5L4Z6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Z6_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 4.230e-9
Identity = 49/162 (30.25%), Postives = 76/162 (46.91%), Query Frame = 0
Query:  242 AELRALNRGYAESVRTVGPPGSVIAANLRRVFAKFDKNDGERPDSKAPPERLYRPS---GRDKSQRSTEEVFENTIRCADKGCLTDPLPFPRMHTLLRVMPKTKRPIYRSVGQTVKNEALHSKVNKLVDGISKVGADSMNSRLLLRVFAHNRQRDVEWGRCS 400
            AE+ A  R ++  VRT   P   +  +L +    + K D      K  P  L RP    G+              ++C  +GC  DP    +M+  L   PKT    +   G T KNE  H  +N+LV+G++++GA++ ++RLL R+  HN   D + GR S
Sbjct:    6 AEVMAKKRAWSPFVRTYSRPAQEVEDDLVKYVGDYVKLDQAAIARKELP--LLRPDLPPGKS-GPIGAMAALNKLVKCLREGCGQDPFDVNQMYIPLGRGPKTGLMRWSKKGGTGKNENFHGGINRLVNGVARLGAEACDARLLQRIHRHNHDMDRKLGRTS 164          
BLAST of jgi.p|Trimin1|169526 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 7.620e-8
Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = 0
Query:  309 VFENTIRCADKGCLTDPLPFPRMHTLLRVMPKTKRPIYRSVGQTVKNEALHSKVNKLVDGISKVGADSMNSRLLLRVFAHNRQRDVEWGRCS 400
                 ++C  KGC  DPL   +++  L   PKT    +   G T KNE  H  +N+LV+G++++GA++ ++RLL R+  HN   D + GR S
Sbjct: 1289 ALNKLVKCLRKGCGQDPLDVDQVYIPLGRGPKTGLMRWSKKGGTGKNENFHGGINRLVNGVARLGAEACDARLLQRIHRHNHDMDRKLGRTS 1380          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169526 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YMJ3_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CA97_9STRA3.330e-7638.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L4Z6_9PHAE4.230e-930.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB16_9PHAE7.620e-835.87Integrase catalytic domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 433..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_64contigContig_64:156378..159030 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169526mRNA_10095Tribonema minus UTEX_B_3156 mRNAContig_64 156378..159030 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|169526|e_gw1.64.69.1 ID=Trimin1|169526|e_gw1.64.69.1|Name=jgi.p|Trimin1|169526|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=479bp
MRAAAALRDADAKGAYDAFLEDAASCHPEQLLQQLALPWATRAHGSHLSV
SSDDVLRRVFNAAFSRIKPYLLADLVRRDPGCCISGDGTFKIAGRVTSSA
TVLHFILGADHCVVAFAAVKGDGFTPVIPLYMQLRRRLEAMGKLFDVQAV
YSDRCCEQRNDPSTAPQAVIFPGCRRVWGDGWHAINTLIEATTRSNHPDL
QAFAAAVGKAIRVPHQEDVEALKRLFIDQARQQGQMLHPDVAELRALNRG
YAESVRTVGPPGSVIAANLRRVFAKFDKNDGERPDSKAPPERLYRPSGRD
KSQRSTEEVFENTIRCADKGCLTDPLPFPRMHTLLRVMPKTKRPIYRSVG
QTVKNEALHSKVNKLVDGISKVGADSMNSRLLLRVFAHNRQRDVEWGRCS
AHEPCPWITARALCPGAEPPPEPQERMGWDYYRDLCNQQLKDLQDMYDEL
KHANSKGIESMHMVVRSMVLRKMQAKPV*
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