mRNA_10121 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A836CB95_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB95_9STRA) HSP 1 Score: 514 bits (1323), Expect = 4.050e-184 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1
Query: 1 MWLPQVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASIGSGPVAADDGGGGAES 774
MWLPQVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASIGSGPVAADDGGGGAES
Sbjct: 1 MWLPQVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASIGSGPVAADDGGGGAES 258
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A835YXR6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR6_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.190e-79 Identity = 126/198 (63.64%), Postives = 155/198 (78.28%), Query Frame = 1
Query: 136 MRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASIG 729
MRGSLR+VL+D + W+Q FTP MR+QVL D+A GM FLH + V+H DLKS NVLIT+WGRAKLTDFGLS+TT+AVSSFTGRST+ GGTVAWM PE+F R SA + SDVYSY+IVTWEVLAG G D + PW G +IV+VIAAV++RGERPPL C+ + NV+ A H +M+RCWAA PADR F +++A +G
Sbjct: 1 MRGSLRKVLNDPNTWRQ-FTPPMRNQVLMDVAEGMEFLHAHNVYHRDLKSHNVLITEWGRAKLTDFGLSKTTNAVSSFTGRSTMGGGTVAWMPPESFGKRLSSALSSSKSDVYSYSIVTWEVLAGTCGVDMSTPWYGKAIVEVIAAVSMRGERPPLADECIEDTNVSRAELHADIMQRCWAADPADRPTFSDLLALMG 197
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A836CGC3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC3_9STRA) HSP 1 Score: 239 bits (611), Expect = 2.110e-76 Identity = 124/203 (61.08%), Postives = 147/203 (72.41%), Query Frame = 1
Query: 118 ILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASI 726
+L+++M RGSL + ++ + WQ+ TP +RHQVL DIA GM FLH N V+H DLKS NVLITDWGRAKLTDFGLS+TT AVSSFTGRST+ GG VA+MAPEAF R SA A SDVYSY IVTWEVLAG G + PW G SIV+VI+AV +RGE PPLP C+ N NV+ A H +MRRCWAA R F E++ I
Sbjct: 10 VLLQFMARGSLCHIFNEPNIWQR-VTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLI 211
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A835YN29_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN29_9STRA) HSP 1 Score: 225 bits (574), Expect = 2.710e-70 Identity = 125/244 (51.23%), Postives = 168/244 (68.85%), Query Frame = 1
Query: 7 LPQVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFT-GRSTLAGGTVAWMAPEAFSARRRSAEHCAL---SDVYSYAIVTWEVLAG--AIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVA 720
L +VY++F++E+YIL+TL+ PR+V + CA++ ++T++M+YM RGSL RVL E+AW++ TP MRH++LCD+A GM +LHD V+H DLKS NVL+TD RA LTDFG+S+T A+++ T +ST AGGT+AW APE F R SDVYSY IV WEVL A A W + +++AAV +RG++PPLP V++ANVA AA HEALMRRC AA P R F+E VA
Sbjct: 6 LQRVYMRFSREVYILSTLQSPRIVPLYACASTTEDLTLVMQYMRRGSLNRVLCSENAWRE-VTPEMRHRLLCDVAQGMQYLHDRNVYHRDLKSHNVLLTDDWRAVLTDFGMSKTCSAITAATHAKSTYAGGTLAWTAPEVFKPRVGGGHRSNFTFKSDVYSYGIVVWEVLVADAARAAPQARRWIQQQMGELVAAV-LRGDQPPLPADSVSDANVARAASHEALMRRCLAAEPEARPSFREAVA 247
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A835YLW5_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW5_9STRA) HSP 1 Score: 186 bits (471), Expect = 3.240e-56 Identity = 94/144 (65.28%), Postives = 113/144 (78.47%), Query Frame = 1
Query: 283 SQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEI 714
S NVLIT+WGRAKLTDFGLSR T AVSSFTGRSTL GGTVAWMAPE+F R+ SA A+SD+YSY IVTWEVLAG G + PW G S+V+VI+AV I GER PL GCV+N+N++ AA H +MRRCW+A P++R F+E+
Sbjct: 1 SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 144
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A835Z605_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z605_9STRA) HSP 1 Score: 198 bits (503), Expect = 3.410e-54 Identity = 118/243 (48.56%), Postives = 151/243 (62.14%), Query Frame = 1
Query: 13 QVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFT-GR--STLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVA--NANVAGAARHEALMRRCWAALPADRLPFKEIVASI 726
+V + F +E+YIL L PRVV + GC +S E+T++MEYM RGSLR++L+ W + TP MRHQ+L D+A GM +LH N ++H DLKS NVLI D RAKL+DFGLSRT ++SF+ GR GT+ WM PE F A A+ DVYSY +V WEVLAG G +A PW +IAAV +RGERP LP C +ANV A H +M C AA PA+R F EI ++
Sbjct: 950 RVMMNFAREVYILTRLVSPRVVSLHGCVSSVGELTLVMEYMRRGSLRKLLNSLELWAE-VTPRMRHQMLSDVAEGMQYLHYNGIYHRDLKSHNVLIGDDFRAKLSDFGLSRTASTITSFSSGRCGGXXXXGTLNWMPPECFDASAAGAD-APKRDVYSYGMVVWEVLAGEAGPEANTPWGRTPPAQLIAAV-LRGERPALPACCDVRGDANVRRAPLHRGIMAACLAAAPAERPTFDEIARTL 1189
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A6H5JPT1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT1_9PHAE) HSP 1 Score: 151 bits (381), Expect = 7.220e-38 Identity = 94/239 (39.33%), Postives = 133/239 (55.65%), Query Frame = 1
Query: 13 QVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLIT-DWGRAKLTDFGLSRTTDAVSS---FTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIV 717
+V+ +F KELYIL+ + RVV + G AS TE+T++ME++ RGS+R +L D+ +Q TP RH +L D A GM +L+ N V H DLKS N L+T DW R K++DFGLS+T DA+S+ T GGT+ +MAPE LSD YS+ +V W+V+ G + PW G+ I D + ++ +GER +P C + LM CW P R F I+
Sbjct: 810 RVFERFVKELYILSQMHSDRVVSMYGAIASPTELTLVMEFLERGSIRTILDDDRQ-RQSMTPVARHGLLLDTAEGMAYLYKNGVQHRDLKSANCLVTHDW-RVKISDFGLSKTIDAISTGSTSTMSGNFRGGTMTYMAPELLPGGAGGDVPAELSDAYSFGVVVWDVVCG----EGRTPWAGVRIYD-LPSLLRKGERLDIPVEC--------GRFYRRLMVSCWNKDPHRRPTFDSIL 1033
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: D7FKP6_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKP6_ECTSI) HSP 1 Score: 149 bits (377), Expect = 2.490e-37 Identity = 93/239 (38.91%), Postives = 134/239 (56.07%), Query Frame = 1
Query: 13 QVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLIT-DWGRAKLTDFGLSRTTDAVS---SFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIV 717
+V+ +F KELYIL+ + RVV + G AS TE+T++ME++ RGS+R +L D+ +Q T +RH +L D A GM +L++N V H DLKS N L+T DW R K++DFGLS+T DA+S S T + GGT+ +MAPE LSD YS+ +V W+++ G + PW G+ I D + + +GER +P C + LM CW P R F I+
Sbjct: 874 RVFERFVKELYILSQMHSERVVSMYGAIASPTELTLVMEFLERGSIRTILDDDRQ-RQSMTRVVRHGLLLDTAEGMTYLYNNGVQHRDLKSANCLVTHDW-RVKISDFGLSKTIDAISTGSSSTMSGSFRGGTMTYMAPELLPGGAGGDVPAELSDAYSFGVVVWDIVCG----EGRTPWAGVRIYD-LPPLLRKGERLDIPVEC--------GRFYRRLMVSCWNQDPHRRPTFDSIL 1097
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A9UQ44_MONBE (Protein kinase domain-containing protein (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UQ44_MONBE) HSP 1 Score: 128 bits (322), Expect = 3.600e-33 Identity = 77/214 (35.98%), Postives = 115/214 (53.74%), Query Frame = 1
Query: 34 KELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCW 675
+EL L+TL HP +V+++G ++ + ++ +L E+ GSL R L D + R + ++A+GM +LH + H DLKSQNVL+ A++ DFGL++ +D ++ TG GT AWMAPE A SDVYS+AIV WE++ +PW G+ V+ AVA +RPP+P C AN + L+R CW
Sbjct: 2 RELQTLSTLEHPNIVKLIGASSLSDQVILLTEFCNAGSLFRALHDMQEVVYEMPWVCR--ISREVASGMAYLHSQHILHRDLKSQNVLLHSTVHARICDFGLAKQSDHMTKMTGTP----GTPAWMAPEVIRAEPSGMP----SDVYSFAIVLWEIVCRQ------VPWQGMEATQVLFAVAAFNKRPPIPQDCPANL--------QELIRACW 191
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: F0Y3M9_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3M9_AURAN) HSP 1 Score: 134 bits (337), Expect = 7.190e-33 Identity = 95/240 (39.58%), Postives = 128/240 (53.33%), Query Frame = 1
Query: 28 FTKELYILATLR-HPRVVEVVG-CAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGG-----TVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASI 726
F KE+ I+ LR HPR V+ VG C A+ + I+ +Y+ GSLR VL D P M+ DIA GM +LH V H DLKSQNVL+T+ R K+TDFG+S++ +A+ + ST+ GG T+ + APEAFS+R R C DVY+YAIV WE+ D PW GL + + AV + ERP +P ALM R W+ A R F++IV +
Sbjct: 245 FKKEVGIMDKLRKHPRTVDFVGICTTDASFVGIVTQYLPNGSLRGVLDDARG--DAIAPKMQFIWAKDIAIGMAYLHKEGVLHRDLKSQNVLLTNEWRCKITDFGISKS-EALKTIATTSTMHGGAGISGTLPFTAPEAFSSRARFTAKC---DVYAYAIVLWEIW------DRGKPWDGLDLPQIYTAVCVEQERPNVPDLMPVEVR--------ALMCRAWSHDAAARPDFEDIVTQL 464 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10121 ID=mRNA_10121|Name=jgi.p|Trimin1|169515|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=777bp|location=Sequence derived from alignment at Contig_64:472059..474198+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTGGCTTCCGCAGGTGTACATCAAGTTCACCAAGGAGCTGTACATACTback to top protein sequence of jgi.p|Trimin1|169515 >Trimin1|169515|e_gw1.64.111.1 ID=Trimin1|169515|e_gw1.64.111.1|Name=jgi.p|Trimin1|169515|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=259bp MWLPQVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLback to top mRNA from alignment at Contig_64:472059..474198+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10121 ID=mRNA_10121|Name=jgi.p|Trimin1|169515|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2140bp|location=Sequence derived from alignment at Contig_64:472059..474198+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_64:472059..474198+ >mRNA_10121 ID=mRNA_10121|Name=jgi.p|Trimin1|169515|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=777bp|location=Sequence derived from alignment at Contig_64:472059..474198+ (Tribonema minus UTEX_B_3156 )back to top |