mRNA_10121 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|169515
Unique NamemRNA_10121
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A836CB95_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB95_9STRA)

HSP 1 Score: 514 bits (1323), Expect = 4.050e-184
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1
Query:    1 MWLPQVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASIGSGPVAADDGGGGAES 774
            MWLPQVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASIGSGPVAADDGGGGAES
Sbjct:    1 MWLPQVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASIGSGPVAADDGGGGAES 258          
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A835YXR6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR6_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.190e-79
Identity = 126/198 (63.64%), Postives = 155/198 (78.28%), Query Frame = 1
Query:  136 MRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASIG 729
            MRGSLR+VL+D + W+Q FTP MR+QVL D+A GM FLH + V+H DLKS NVLIT+WGRAKLTDFGLS+TT+AVSSFTGRST+ GGTVAWM PE+F  R  SA   + SDVYSY+IVTWEVLAG  G D + PW G +IV+VIAAV++RGERPPL   C+ + NV+ A  H  +M+RCWAA PADR  F +++A +G
Sbjct:    1 MRGSLRKVLNDPNTWRQ-FTPPMRNQVLMDVAEGMEFLHAHNVYHRDLKSHNVLITEWGRAKLTDFGLSKTTNAVSSFTGRSTMGGGTVAWMPPESFGKRLSSALSSSKSDVYSYSIVTWEVLAGTCGVDMSTPWYGKAIVEVIAAVSMRGERPPLADECIEDTNVSRAELHADIMQRCWAADPADRPTFSDLLALMG 197          
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A836CGC3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC3_9STRA)

HSP 1 Score: 239 bits (611), Expect = 2.110e-76
Identity = 124/203 (61.08%), Postives = 147/203 (72.41%), Query Frame = 1
Query:  118 ILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASI 726
            +L+++M RGSL  + ++ + WQ+  TP +RHQVL DIA GM FLH N V+H DLKS NVLITDWGRAKLTDFGLS+TT AVSSFTGRST+ GG VA+MAPEAF   R SA   A SDVYSY IVTWEVLAG  G   + PW G SIV+VI+AV +RGE PPLP  C+ N NV+ A  H  +MRRCWAA    R  F E++  I
Sbjct:   10 VLLQFMARGSLCHIFNEPNIWQR-VTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLI 211          
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A835YN29_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN29_9STRA)

HSP 1 Score: 225 bits (574), Expect = 2.710e-70
Identity = 125/244 (51.23%), Postives = 168/244 (68.85%), Query Frame = 1
Query:    7 LPQVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFT-GRSTLAGGTVAWMAPEAFSARRRSAEHCAL---SDVYSYAIVTWEVLAG--AIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVA 720
            L +VY++F++E+YIL+TL+ PR+V +  CA++  ++T++M+YM RGSL RVL  E+AW++  TP MRH++LCD+A GM +LHD  V+H DLKS NVL+TD  RA LTDFG+S+T  A+++ T  +ST AGGT+AW APE F  R            SDVYSY IV WEVL    A     A  W    + +++AAV +RG++PPLP   V++ANVA AA HEALMRRC AA P  R  F+E VA
Sbjct:    6 LQRVYMRFSREVYILSTLQSPRIVPLYACASTTEDLTLVMQYMRRGSLNRVLCSENAWRE-VTPEMRHRLLCDVAQGMQYLHDRNVYHRDLKSHNVLLTDDWRAVLTDFGMSKTCSAITAATHAKSTYAGGTLAWTAPEVFKPRVGGGHRSNFTFKSDVYSYGIVVWEVLVADAARAAPQARRWIQQQMGELVAAV-LRGDQPPLPADSVSDANVARAASHEALMRRCLAAEPEARPSFREAVA 247          
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A835YLW5_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW5_9STRA)

HSP 1 Score: 186 bits (471), Expect = 3.240e-56
Identity = 94/144 (65.28%), Postives = 113/144 (78.47%), Query Frame = 1
Query:  283 SQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEI 714
            S NVLIT+WGRAKLTDFGLSR T AVSSFTGRSTL GGTVAWMAPE+F  R+ SA   A+SD+YSY IVTWEVLAG  G   + PW G S+V+VI+AV I GER PL  GCV+N+N++ AA H  +MRRCW+A P++R  F+E+
Sbjct:    1 SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 144          
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A835Z605_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z605_9STRA)

HSP 1 Score: 198 bits (503), Expect = 3.410e-54
Identity = 118/243 (48.56%), Postives = 151/243 (62.14%), Query Frame = 1
Query:   13 QVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFT-GR--STLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVA--NANVAGAARHEALMRRCWAALPADRLPFKEIVASI 726
            +V + F +E+YIL  L  PRVV + GC +S  E+T++MEYM RGSLR++L+    W +  TP MRHQ+L D+A GM +LH N ++H DLKS NVLI D  RAKL+DFGLSRT   ++SF+ GR       GT+ WM PE F A    A+     DVYSY +V WEVLAG  G +A  PW       +IAAV +RGERP LP  C    +ANV  A  H  +M  C AA PA+R  F EI  ++
Sbjct:  950 RVMMNFAREVYILTRLVSPRVVSLHGCVSSVGELTLVMEYMRRGSLRKLLNSLELWAE-VTPRMRHQMLSDVAEGMQYLHYNGIYHRDLKSHNVLIGDDFRAKLSDFGLSRTASTITSFSSGRCGGXXXXGTLNWMPPECFDASAAGAD-APKRDVYSYGMVVWEVLAGEAGPEANTPWGRTPPAQLIAAV-LRGERPALPACCDVRGDANVRRAPLHRGIMAACLAAAPAERPTFDEIARTL 1189          
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A0A6H5JPT1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT1_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 7.220e-38
Identity = 94/239 (39.33%), Postives = 133/239 (55.65%), Query Frame = 1
Query:   13 QVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLIT-DWGRAKLTDFGLSRTTDAVSS---FTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIV 717
            +V+ +F KELYIL+ +   RVV + G  AS TE+T++ME++ RGS+R +L D+   +Q  TP  RH +L D A GM +L+ N V H DLKS N L+T DW R K++DFGLS+T DA+S+    T      GGT+ +MAPE             LSD YS+ +V W+V+ G    +   PW G+ I D + ++  +GER  +P  C           +  LM  CW   P  R  F  I+
Sbjct:  810 RVFERFVKELYILSQMHSDRVVSMYGAIASPTELTLVMEFLERGSIRTILDDDRQ-RQSMTPVARHGLLLDTAEGMAYLYKNGVQHRDLKSANCLVTHDW-RVKISDFGLSKTIDAISTGSTSTMSGNFRGGTMTYMAPELLPGGAGGDVPAELSDAYSFGVVVWDVVCG----EGRTPWAGVRIYD-LPSLLRKGERLDIPVEC--------GRFYRRLMVSCWNKDPHRRPTFDSIL 1033          
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: D7FKP6_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKP6_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 2.490e-37
Identity = 93/239 (38.91%), Postives = 134/239 (56.07%), Query Frame = 1
Query:   13 QVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLIT-DWGRAKLTDFGLSRTTDAVS---SFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIV 717
            +V+ +F KELYIL+ +   RVV + G  AS TE+T++ME++ RGS+R +L D+   +Q  T  +RH +L D A GM +L++N V H DLKS N L+T DW R K++DFGLS+T DA+S   S T   +  GGT+ +MAPE             LSD YS+ +V W+++ G    +   PW G+ I D +  +  +GER  +P  C           +  LM  CW   P  R  F  I+
Sbjct:  874 RVFERFVKELYILSQMHSERVVSMYGAIASPTELTLVMEFLERGSIRTILDDDRQ-RQSMTRVVRHGLLLDTAEGMTYLYNNGVQHRDLKSANCLVTHDW-RVKISDFGLSKTIDAISTGSSSTMSGSFRGGTMTYMAPELLPGGAGGDVPAELSDAYSFGVVVWDIVCG----EGRTPWAGVRIYD-LPPLLRKGERLDIPVEC--------GRFYRRLMVSCWNQDPHRRPTFDSIL 1097          
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: A9UQ44_MONBE (Protein kinase domain-containing protein (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UQ44_MONBE)

HSP 1 Score: 128 bits (322), Expect = 3.600e-33
Identity = 77/214 (35.98%), Postives = 115/214 (53.74%), Query Frame = 1
Query:   34 KELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCW 675
            +EL  L+TL HP +V+++G ++ + ++ +L E+   GSL R L D      +     R  +  ++A+GM +LH   + H DLKSQNVL+     A++ DFGL++ +D ++  TG      GT AWMAPE   A          SDVYS+AIV WE++         +PW G+    V+ AVA   +RPP+P  C AN         + L+R CW
Sbjct:    2 RELQTLSTLEHPNIVKLIGASSLSDQVILLTEFCNAGSLFRALHDMQEVVYEMPWVCR--ISREVASGMAYLHSQHILHRDLKSQNVLLHSTVHARICDFGLAKQSDHMTKMTGTP----GTPAWMAPEVIRAEPSGMP----SDVYSFAIVLWEIVCRQ------VPWQGMEATQVLFAVAAFNKRPPIPQDCPANL--------QELIRACW 191          
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Match: F0Y3M9_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3M9_AURAN)

HSP 1 Score: 134 bits (337), Expect = 7.190e-33
Identity = 95/240 (39.58%), Postives = 128/240 (53.33%), Query Frame = 1
Query:   28 FTKELYILATLR-HPRVVEVVG-CAASATEMTILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGG-----TVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASI 726
            F KE+ I+  LR HPR V+ VG C   A+ + I+ +Y+  GSLR VL D         P M+     DIA GM +LH   V H DLKSQNVL+T+  R K+TDFG+S++ +A+ +    ST+ GG     T+ + APEAFS+R R    C   DVY+YAIV WE+       D   PW GL +  +  AV +  ERP +P                ALM R W+   A R  F++IV  +
Sbjct:  245 FKKEVGIMDKLRKHPRTVDFVGICTTDASFVGIVTQYLPNGSLRGVLDDARG--DAIAPKMQFIWAKDIAIGMAYLHKEGVLHRDLKSQNVLLTNEWRCKITDFGISKS-EALKTIATTSTMHGGAGISGTLPFTAPEAFSSRARFTAKC---DVYAYAIVLWEIW------DRGKPWDGLDLPQIYTAVCVEQERPNVPDLMPVEVR--------ALMCRAWSHDAAARPDFEDIVTQL 464          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169515 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CB95_9STRA4.050e-184100.00Kinase-like domain-containing protein n=2 Tax=Trib... [more]
A0A835YXR6_9STRA1.190e-7963.64Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A836CGC3_9STRA2.110e-7661.08Kinase-like domain-containing protein (Fragment) n... [more]
A0A835YN29_9STRA2.710e-7051.23Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YLW5_9STRA3.240e-5665.28Kinase-like domain-containing protein (Fragment) n... [more]
A0A835Z605_9STRA3.410e-5448.56Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A6H5JPT1_9PHAE7.220e-3839.33Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FKP6_ECTSI2.490e-3738.91Protein kinase domain-containing protein n=1 Tax=E... [more]
A9UQ44_MONBE3.600e-3335.98Protein kinase domain-containing protein (Fragment... [more]
F0Y3M9_AURAN7.190e-3339.58Protein kinase domain-containing protein n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_64contigContig_64:472059..474198 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|169515|e_gw1.64.111.1
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944
Preferred nameRCCD1
Descriptionguanyl-nucleotide exchange factor activity
COG categoryDZ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0515@1|root,COG5184@1|root,KOG0192@2759|Eukaryota,KOG1426@2759|Eukaryota
Evalue4.09e-38
Seed ortholog2880.D7FKP6
Hectar predicted targeting categoryother localisation
TranscriptId169837
TrackFilteredModels1
ProteinId169515
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169515gene_10121Tribonema minus UTEX_B_3156 geneContig_64 472059..474198 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10121_1exon_10121_1Tribonema minus UTEX_B_3156 exonContig_64 472059..472187 +
exon_10121_2exon_10121_2Tribonema minus UTEX_B_3156 exonContig_64 472512..472666 +
exon_10121_3exon_10121_3Tribonema minus UTEX_B_3156 exonContig_64 473706..474198 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10121CDS_10121Tribonema minus UTEX_B_3156 CDSContig_64 472059..472187 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169515Trimin1|169515|e_gw1.64.111.1Tribonema minus UTEX_B_3156 polypeptideContig_64 472059..474198 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10121 ID=mRNA_10121|Name=jgi.p|Trimin1|169515|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=777bp|location=Sequence derived from alignment at Contig_64:472059..474198+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGCTTCCGCAGGTGTACATCAAGTTCACCAAGGAGCTGTACATACT
GGCAACGCTCAGGCACCCGCGCGTGGTGGAGGTGGTGGGCTGCGCTGCAT
CCGCCACGGAGATGACCATATTAATGGAGTACATGATGCGCGGGAGCCTG
CGGCGCGTGCTGAGCGATGAGCACGCGTGGCAGCAGCAGTTCACGCCCAC
CATGCGCCACCAGGTGCTGTGCGACATTGCCGCGGGCATGCTGTTCCTGC
ACGACAACAGGGTGCACCACGGGGACCTCAAGAGCCAAAACGTGCTCATC
ACCGACTGGGGGCGCGCCAAGCTCACGGACTTCGGCTTGTCGCGCACGAC
GGACGCCGTCAGCTCATTCACCGGGCGCAGCACGCTCGCGGGTGGAACGG
TCGCGTGGATGGCCCCGGAGGCCTTCAGCGCGCGCCGCCGCTCCGCGGAG
CACTGCGCGCTGAGCGACGTCTACAGCTACGCGATAGTCACGTGGGAGGT
CCTCGCGGGCGCCATCGGCGGCGACGCCGCCATCCCCTGGTGCGGCCTCT
CCATCGTCGACGTCATCGCGGCGGTGGCGATCCGCGGCGAGCGCCCGCCG
CTGCCGCCGGGCTGCGTGGCCAACGCCAACGTCGCCGGCGCCGCGCGCCA
CGAGGCGCTCATGCGGCGCTGCTGGGCGGCGCTGCCTGCGGACCGCCTAC
CGTTCAAGGAGATCGTGGCGAGCATCGGCAGCGGCCCGGTGGCGGCAGAT
GACGGCGGTGGTGGCGCCGAGAGCTGA
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protein sequence of jgi.p|Trimin1|169515

>Trimin1|169515|e_gw1.64.111.1 ID=Trimin1|169515|e_gw1.64.111.1|Name=jgi.p|Trimin1|169515|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=259bp
MWLPQVYIKFTKELYILATLRHPRVVEVVGCAASATEMTILMEYMMRGSL
RRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLI
TDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAE
HCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPP
LPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASIGSGPVAAD
DGGGGAES*
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mRNA from alignment at Contig_64:472059..474198+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10121 ID=mRNA_10121|Name=jgi.p|Trimin1|169515|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2140bp|location=Sequence derived from alignment at Contig_64:472059..474198+ (Tribonema minus UTEX_B_3156 )
ATGTGGCTTCCGCAGGTGTACATCAAGTTCACCAAGGAGCTGTACATACT GGCAACGCTCAGGCACCCGCGCGTGGTGGAGGTGGTGGGCTGCGCTGCAT CCGCCACGGAGATGACCATATTAATGGAGGTATGTATAAATACATGTCAT GCCATATATACCACACCTACATACTATTTTTGCAGTTCATACTTTTCAAG TACATGCATGCATGTGGGCTGCGCCGCGTCTGCCACGGAGATGACCATAC TGACAAAGGTGAGCCGCATAACACACATGTACAAGTACATGCCATACCCA CACCTTCATGCATACATTCGTGAGGTCTGCGCCGCGTCTGCTTTGCTGAC AGCGCATGCTGCGAAGAACCCTGCTGAGCCACGCATACTCACTAACCCTA GCCCTAGTGCAAACCCTAATTCTAACATTAATTTTACCCCTGCTCGCCGG CAGTACATGATGCGCGGGAGCCTGCGGCGCGTGCTGAGCGATGAGCACGC GTGGCAGCAGCAGTTCACGCCCACCATGCGCCACCAGGTGCTGTGCGACA TTGCCGCGGGCATGCTGTTCCTGCACGACAACAGGGTGCACCACGGGGAC CTCAAGAGGTGCGTCACTGCCCAATTACTTTTGAAGTAAACCAAGTATAC TTCGCAGTTGAAGTATGGCTAATCCTAAGAGGGAATGCTGATCTTCACGA CAACAGGGTGCACCACGGGGACCTCAAGAGGTGCGTCACTGCACGTACAG TGTACTCAGCAGTTGAAGTTTACAAATCAAGAGGAACAAATACCTTTCCA GCGTGACTCCAGGGTGTGCACCACAGGGACCTCGACAGGTGCGTGACTGC CAGCACACTCTACATCAGATTTGAAGCATGCCAGGCCGTAGAGGACGTGC TGATCCTGCACATGGACAAGGTGTACCATGGGCGCTTTGAGGTGCGCTGC CGCCATCACTCGAAACTTCAACGTTGAGGCGTGCAGTGGGGCCAACGACA TTTCACCATCATGAGGCAGGCCGTGCTCAAAGCATAGCACAACGCAACGT AAAGACATGACCCGGTTGGGTCAGGATGCTAACAAGGCATTGATAGCAGC TGCAGCTCAAAAGGTATATCCTAGCTACCTGTGCCCCCCCCCGGCCATAC CCCCTGCACCACATGGGGGGGAGGGGCACGCAGTGCAGCCAGGCCTACTG AGGTAGTACGGTTTACTTTCAGTAGCTGTATACGAAAGTCTGCAGGTTAG AATTACGGAGGGTTAGCATTTGGGTTAGGGCAGGCGCCAGACGCCAATTC GGCTCTCTCAGAGCCTTGTTGCGCTACATGGTGCAAGTTTCTTGGAGTCT GCACTAGCTCACAACATGAGTCCTGCCTGATACGCCATGTCATCGCGCAG GATGGTCTGATGTGCATGCAATATGCTGCACAATGTCGCCAGTGGCTTCT GCACCAGGCATCATGTTGGCCCGGTGTCTGCTGCGAAACGCTGCCTCCAT CAATGTTGCAATCAGGTACTCTAAAAAAGCACCACATCTCGCACCACATC ACATGCAGCATGAAAACACCATCCGCAACCAACGACAGCACTCAACGCCC CCCTGCCCCTCCCCCCCGCGCCCCCCCCCCCCCCCCCTGGCGTGCAGCCA AAACGTGCTCATCACCGACTGGGGGCGCGCCAAGCTCACGGACTTCGGCT TGTCGCGCACGACGGACGCCGTCAGCTCATTCACCGGGCGCAGCACGCTC GCGGGTGGAACGGTCGCGTGGATGGCCCCGGAGGCCTTCAGCGCGCGCCG CCGCTCCGCGGAGCACTGCGCGCTGAGCGACGTCTACAGCTACGCGATAG TCACGTGGGAGGTCCTCGCGGGCGCCATCGGCGGCGACGCCGCCATCCCC TGGTGCGGCCTCTCCATCGTCGACGTCATCGCGGCGGTGGCGATCCGCGG CGAGCGCCCGCCGCTGCCGCCGGGCTGCGTGGCCAACGCCAACGTCGCCG GCGCCGCGCGCCACGAGGCGCTCATGCGGCGCTGCTGGGCGGCGCTGCCT GCGGACCGCCTACCGTTCAAGGAGATCGTGGCGAGCATCGGCAGCGGCCC GGTGGCGGCAGATGACGGCGGTGGTGGCGCCGAGAGCTGA
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Coding sequence (CDS) from alignment at Contig_64:472059..474198+

>mRNA_10121 ID=mRNA_10121|Name=jgi.p|Trimin1|169515|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=777bp|location=Sequence derived from alignment at Contig_64:472059..474198+ (Tribonema minus UTEX_B_3156 )
ATGTGGCTTCCGCAGGTGTACATCAAGTTCACCAAGGAGCTGTACATACT
GGCAACGCTCAGGCACCCGCGCGTGGTGGAGGTGGTGGGCTGCGCTGCAT
CCGCCACGGAGATGACCATATTAATGGAGTACATGATGCGCGGGAGCCTG
CGGCGCGTGCTGAGCGATGAGCACGCGTGGCAGCAGCAGTTCACGCCCAC
CATGCGCCACCAGGTGCTGTGCGACATTGCCGCGGGCATGCTGTTCCTGC
ACGACAACAGGGTGCACCACGGGGACCTCAAGAGCCAAAACGTGCTCATC
ACCGACTGGGGGCGCGCCAAGCTCACGGACTTCGGCTTGTCGCGCACGAC
GGACGCCGTCAGCTCATTCACCGGGCGCAGCACGCTCGCGGGTGGAACGG
TCGCGTGGATGGCCCCGGAGGCCTTCAGCGCGCGCCGCCGCTCCGCGGAG
CACTGCGCGCTGAGCGACGTCTACAGCTACGCGATAGTCACGTGGGAGGT
CCTCGCGGGCGCCATCGGCGGCGACGCCGCCATCCCCTGGTGCGGCCTCT
CCATCGTCGACGTCATCGCGGCGGTGGCGATCCGCGGCGAGCGCCCGCCG
CTGCCGCCGGGCTGCGTGGCCAACGCCAACGTCGCCGGCGCCGCGCGCCA
CGAGGCGCTCATGCGGCGCTGCTGGGCGGCGCTGCCTGCGGACCGCCTAC
CGTTCAAGGAGATCGTGGCGAGCATCGGCAGCGGCCCGGTGGCGGCAGAT
GACGGCGGTGGTGGCGCCGAGAGCTGA
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