mRNA_10100 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A835YQS0_9STRA (Procollagen-lysine 5-dioxygenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS0_9STRA) HSP 1 Score: 1132 bits (2929), Expect = 0.000e+0 Identity = 662/662 (100.00%), Postives = 662/662 (100.00%), Query Frame = 1
Query: 1 SKPVLTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVLGMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAGSVVDLGEYGLGKERTLAQVHVGVCSENVGAEPM 1986
SKPVLTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVLGMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAGSVVDLGEYGLGKERTLAQVHVGVCSENVGAEPM
Sbjct: 1 SKPVLTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVLGMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAGSVVDLGEYGLGKERTLAQVHVGVCSENVGAEPM 662
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: D7FNT7_ECTSI (Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT7_ECTSI) HSP 1 Score: 444 bits (1143), Expect = 3.850e-144 Identity = 280/597 (46.90%), Postives = 356/597 (59.63%), Query Frame = 1
Query: 1 SKPVLTPADLFVLG----ARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASI------GKELRASRLGKELGLVP-RTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHL----------GGNKGAGGGQ-LGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPL----GDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVL 1713
S PV+TPADLF L A P VVKD +G A A A V+ G M+PAGMG W RGD ++W+T GI + + GLE +L +L+++ G L + LGLV TSVQLA YPG GRGYV+H D T SA+D++ + R+ +TA+YYLNPDW GG LRVHL GG + AG + G WD+EPVLDR+VLFRS++VEHEVLP+ APR A+T+WFYGR + A+P+ +P S P L A DTR ++ PLP G A + IFVS+VSYRD EA PT+ DL + A P+RV VGLV A + GRV ++ M AA+AAGP WAR VA ++W+GE YVLQ DSH RFR WD+YL+ TL+ CPS +PILTTYP GY+LP+++P G +T+ T+L P GFG DGMLRQ R + ++ A +PL S LWA+GF+F S A+L + YDP LRH FFGEEA+MAAR+FT G+DF+APPQAV YHLWTR HR SFR+N T E E R+R +L
Sbjct: 37 SYPVITPADLFSLSSGGFAAGSPGVVVKDGFLGREQALQAHAAALEVENRGEMKPAGMGRRDGVWHGQQSRGDSIMWITEGIRGKGE-LPEGLENLLMRLSALRGPLNDGCGLPTTSSAPGLGLVKDTTSVQLARYPGDGRGYVRHRD---------TPRSAQDSEEAERK-ITALYYLNPDWRPSMGGQLRVHLDSRPEAAAEEGGPRPAGEEEEKAGRKWDIEPVLDRLVLFRSDLVEHEVLPASAPRLAVTLWFYGR---QLGLPASPSTRSPSSVPPLPAPEQQ-----LAAGDDTRDKVRPLPSPAGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARATNPERVSVGLVWQLEAGVAEDEAMHRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSIWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPILTTYPVGYQLPHKIPAG--ETRPTLLVPDGFGPDGMLRQTGRLLLRK--------ARDPLPSPLWASGFSFSAS-AVLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQNSTKEAEAEEAAANRRLRWLL 603
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A6H5L271_9PHAE (Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L271_9PHAE) HSP 1 Score: 439 bits (1128), Expect = 1.170e-141 Identity = 273/574 (47.56%), Postives = 341/574 (59.41%), Query Frame = 1
Query: 7 PVLTPADLFVLG----ARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASI------GKELRASRLGKELGLVP-RTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLG-----------GGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLP----LGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRE 1650
PVLTPADLF L A P VVKD +G A A A V+ GG M+PAGMG G W RGD ++W+T GI + + GLE +L +L ++ G L + LGLV TSVQLA YPG GRGYV+H D T SA+D++ + R+ +TA+YYLNPDW GG LRVHL + A + G G WD+EPVLDR+VLFRS++VEHEVLP+ APR A+T+WFYGR + A+P+ P S P L DTR + PLP G A + IFVS+VSYRD EA PT+ DL + AA P RV VGLV A + GRV ++ M A EAAGP WAR VA +LW+GE YVLQ DSH RFR WD+YL+ TL+ CPS +P+LTTYP GYE+P+++P G +T+ T+L P GFG DGMLRQ R + ++ A +PL S LWA+GF+F S A+L + YDP LRH FFGEEA+MAAR+FT G+DF+APPQAV YHLWTR HR SFR+
Sbjct: 39 PVLTPADLFSLSSGGFAAGSPGVVVKDGFLGREQALQAHAAALEVENGGKMKPAGMGRGDGVWLGQQSRGDSIMWITEGIRGKGE-LPEGLENLLMRLFALRGPLNDGCGLPTTSSATGLGLVKDTTSVQLARYPGDGRGYVRHRD---------TPRSAQDSEEAERK-ITALYYLNPDWRPSMGGQLRVHLDSRREAAAEEGGPRPAGEEEEKAGRKWDIEPVLDRLVLFRSDLVEHEVLPALAPRLAVTLWFYGR---QLGLPASPSARRPSSVPPLPAPEQQ-----LAPGDDTRDNVRPLPPPDGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARAANPGRVSVGLVWQLEAGVAEDEAMRRATPGGKEIRGGRVRSLFMPAVEAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIQTLQSCPSFKPVLTTYPVGYEMPHKIPAG--ETRPTLLVPDGFGPDGMLRQTGRLLLRK--------ARDPLPSPLWASGFSFSAS-AMLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQ 582
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A7S2SW69_9STRA (Procollagen-lysine 5-dioxygenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW69_9STRA) HSP 1 Score: 355 bits (912), Expect = 2.970e-110 Identity = 227/574 (39.55%), Postives = 299/574 (52.09%), Query Frame = 1
Query: 145 MRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELR---------ASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGG----GTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYG---------------------------RPPRRAAPAAAPT---MLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAP----LPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFG-ADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVLGMP 1722
+RPA MG G WQ RGD L W+ D GP L L + + +EL+ + + LGL R S QLA YPG+G GYV+H DA E + R TA++YLN W A DGG LR+ LG G GG G WDVEPV++R+++FRS+ +EHEVLP++APR A+T WFYG + PR+ +P + P +A + +P L + + D S IFVSI S+RD E T+ DL TA P+R+ VG+V G E LP A RV + MD +A GPC ARH+A LWRGE YVLQ DSHMRFR NWD YLL L++CPS +P+LTTYP+GY LPN VP ++++ T+LCP +G ADG+LRQ + +A + LWAAGFNF + A++R+ YDP L +FFGEE +MAARL+T GYDF+APP+AV YHLWTR HRP + E + + AR++ +L +P
Sbjct: 18 LRPARMGRGLGEWQAGAKRGDELAWIHSTDED----LGPSLRGFLGVMEGLREELKHRWGCSADSRRQSSRRLGLTSRLSHQLARYPGSGEGYVRHKDAYPEAAGEES------------RLFTAIFYLNRGWSAADGGKLRLFLGEGHGPAAAGPGGAREEGVWDVEPVMNRLIIFRSHDLEHEVLPAWAPRIAVTTWFYGVLEGATPXXXXXXXXLLSSLALPSPVTKDPRKDGVGGLEVEGDQSSPTAAAHPESLLLLHHNVPTSAHPSSLPPCSPPRRSLQVSEDHDGNSTIFVSIASFRDSECQHTVLDLFRTAQYPERLTVGIV---GQYDAVEDIRCFDQAPLPLAWARRVRVLHMDWQQAEGPCLARHLAQQLWRGEDYVLQIDSHMRFRPNWDTYLLHCLQQCPSSKPVLTTYPTGYTLPNHVP---DESRPTLLCPSHYGGADGVLRQTGKLLAARQSAPIACRG-------LWAAGFNFA-AAAVIREVPYDPTLSFLFFGEEISMAARLWTHGYDFFAPPEAVVYHLWTRTHRPVRTAGKDEEHRQAKSASLARVKDMLRLP 561
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A024UVX4_9STRA (Procollagen-lysine 5-dioxygenase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVX4_9STRA) HSP 1 Score: 314 bits (804), Expect = 4.330e-94 Identity = 212/559 (37.92%), Postives = 285/559 (50.98%), Query Frame = 1
Query: 19 PADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQD---DGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXX-APLTAEGDTRAQLAP---------LPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENE 1656
P+++F+L P +V++ +G A A R ++ MRPA + G RGDHLLW+ D P P ++ +L +L + L ++ EL L S QLA +PG +V+H+D G + + R +T +YYLN DW GG LRVHL G D+ P+LD +V+FRS V HEVLP+ R ALT WFYG P P A T+ + P A L A L P LP PDL S IFVSI SY D E PT+A L +TA AP RV GL L A+ A +V M A+A GPC AR LWRGEPY LQ DSHMRFR+ WD +L+ L +C SPR ILTTYP GY LPN++ + T+LC F ++G++RQ ++ + ++P+ S+ WAAGF F + +L++ YDP+L H+FFGEE MAARL+T GYDF+AP +AV YHLW+R+HRP+FR+++
Sbjct: 90 PSEVFLLRQPDSPGFIVRENFLGAAQATRVLDACRALRESMPMRPAQVAVGKMNQVTALVTDARGDHLLWLPHDDKDVP----PPVQHLLVQLGRLAHGL--AKAAPELALRNAKSTQLAIFPGNNTRFVQHVDTYGSKKDQLS------------RRITCLYYLNADWQPSHGGALRVHL----------KDGSHEDIPPLLDSLVVFRSADVMHEVLPTTVDRLALTTWFYGGPTPSDVPTTAATIPKSLGKPNTATFETIEASPATLNRSHTPDASLPPPGLCGGGMALPPPAIPDLISTIFVSIPSYCDSECQPTVAHLFATATAPSRVFAGLCLQHDEGDPAQAIAFAA------AYGDQVRVKRMHPADATGPCLARWETQQLWRGEPYYLQIDSHMRFRQGWDVFLIHELSQCSSPRAILTTYPLGYNLPNQIT---RDIRPTLLCASHFDSNGLVRQCSKVLKTSP--------SKPIPSMFWAAGFAFSRA-TVLQEVMYDPSLTHLFFGEENVMAARLWTHGYDFFAPTEAVVYHLWSRSHRPTFRDHQ 602
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A329RXD0_9STRA (Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RXD0_9STRA) HSP 1 Score: 313 bits (801), Expect = 7.640e-94 Identity = 209/556 (37.59%), Postives = 290/556 (52.16%), Query Frame = 1
Query: 13 LTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARER 1680
L P++LF L P V+K+A +G A + A G A +GAG D RGD + W I + P + + R++ ++ L+ ++ EL L S Q A +PG G +VKH+D H++ ++D R VT VYYLN W GG LRVHL +K L WDV P LD +++FRS VEHEV+P++ R A+T+W+YG PP A+PA A + PV P +T A+ A IFVSI SYRD E T+ +LL+ A P RV +G+ L + + G +D +AAGPC AR A LW+GE + LQ DSHMRFR WD +L+ L +CPSP+PILTTYP GY LPN + + + + T+LC F + GMLRQ ++ +A+ + +PL S+ WAAGF F S ++ + YD LR +FFGEE++MAARL+T+G+DF+ P + V YHLWTR +RP F+E E+ ET R R
Sbjct: 69 LNPSELFALKHPESPGFVIKEAFLGRQNALAVRDALTELAASGTFHEAKVGAGQNLRSDRAVRGDKIHW----IQTPTESVSPVILHLRRQVETLVYGLK--KVSPELDLRNVVSTQFAIFPGDGARFVKHVDTYSNAHSDERGGMSKD---GLVRLVTCVYYLNDQWEPEHGGHLRVHLKASK-----LLPSCHWDVSPKLDTLMVFRSLDVEHEVMPTYRERKAVTIWYYGEPPE-ASPAIARSEALPVPRPLPS----------ITGNKSDHAERA------------SIFVSIPSYRDSECRHTVDNLLTQATFPGRVSIGICLQTDDDDDTRAYLESKYSSSKVRVHG------VDFRKAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLINELEKCPSPKPILTTYPLGYTLPNEISS---ECRPTLLCASTFDSLGMLRQTSKILAK--------ISTKPLPSLFWAAGFAFS-SSKVIEEVPYDETLRFLFFGEESSMAARLWTSGWDFFTPSETVVYHLWTRTYRPVFQELESDETKRYR 569
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A485KTR2_9STRA (Procollagen-lysine 5-dioxygenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTR2_9STRA) HSP 1 Score: 308 bits (790), Expect = 4.730e-92 Identity = 224/588 (38.10%), Postives = 298/588 (50.68%), Query Frame = 1
Query: 13 LTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPA--GMGAGARRWQDDGY-RGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFY--------GRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAP-LPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVL-HSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMR-------FRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENE-TAETARERQRGEARIRAVL 1713
L +++FVL S P +V++ +G A A +Q MR A GMG G + RGD L+W++ + P P ++ +++ + + L + ELG+ S Q A +PG +VKH+D H RR +T +YYLNP W GG LRVHLG + +WDV P LD ++LFRS VEHEVLP+ R ALT WFY R A PA+A AP ++P + D + AP LP +P IFVSI S+RD E PT+ L +TAA P RV VGL L H+ TA +V M +A GPC ARH A LWRGE Y LQ DSHMR FR +WDAYL+ L RC + +PILTTYP GY LPN++P+ T+ T+LC F G+LRQ + + PL WAAGF F + +++ YDP+L H+FFGEE +MAARL+T GYDF+APP+AV YHLW+RAHRP F++ TAE +E+ AR++ +L
Sbjct: 75 LNHSEVFVLRESSSPGFIVREDFLGDAPAMAVRDACLRLQQMHEMRDAEVGMGKGGDVTSHVAHARGDQLMWLSHDESQVP----PPIQHLMKHIERLVHGL--VKAAPELGIRNIRSTQFAIFPGNNTRFVKHVDTYS--HRPGL-----------RRCITCLYYLNPHWDLSHGGQLRVHLGES-----------SWDVPPRLDTLLLFRSTDVEHEVLPTTVDRLALTTWFYCNADDANIPHTTRTANPASATAAAAPKTFPRASRPPCIRSDDSQPLDVDMAPRRAPPLPTSISPSPDDTIFVSIPSFRDSECAPTLQHLFATAACPARVVVGLCLQHADDDDTAFVDKYG----------AQVRVTRMHHTDATGPCLARHAAQQLWRGERYHLQIDSHMRYESLVRSFRPHWDAYLVEQLHRCDATKPILTTYPMGYHLPNQIPS---DTRPTLLCASHFDTHGLLRQTGKVLKVSPP--------RPLPCSFWAAGFAFSEA-TVIQHVPYDPSLSHLFFGEENSMAARLWTHGYDFFAPPEAVVYHLWSRAHRPVFQDTRPTAE--KEKAASLARVQRLL 608
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A833TAL9_PHYIN (Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TAL9_PHYIN) HSP 1 Score: 308 bits (788), Expect = 5.830e-92 Identity = 203/558 (36.38%), Postives = 291/558 (52.15%), Query Frame = 1
Query: 13 LTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVT--GGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARER 1680
L+P+DLF L P VVK++ +G +A + G A +GAG D RGD + W+ ++ + P + + R++ S+ L+ ++ EL L S Q A +PG G +VKH+D H ++D R +T VYYLN W GG LRVHL +K L WDV P LD +++FRS VEHEV+P++ R A+T+W+YG+P + A + T P P T A+ A +FV+I SYRD E T+ +LL+ A P+R+ +G+ L + + +V +D EAAGPC AR A L++GE LQ DSHMRFR WD +L+ L +CPS +PILTTYP GY LPN + T + + T+LC F + GMLRQ ++ +A++ + +PL S+ WAAGF F S A++ + YD LR +FFGEE++MAARL+T+G+DF+ P +AV YHLWTRA+RP F+E E+ +T R R
Sbjct: 69 LSPSDLFALKHPDSPGIVVKESFLGRQSALAVRDALTELATSGTFHEAKVGAGQNLRNDRMVRGDKIHWIQTPNDLSAPTESVNPAILHLRRQVESLVYGLK--KVSPELDLRNVVSTQFAVFPGDGARFVKHVDTYLNAHRNEQEGVSKD---GLVRLITCVYYLNDRWEPEHGGHLRVHLKDSK-----LLPAYHWDVPPNLDTLLVFRSLDVEHEVMPTYRERKAVTIWYYGKPSQAAPASRTETSSVPCPLPST------------TGSNSDHAEQA------------SVFVAIPSYRDSECRHTVDNLLAQATFPERISIGICLQTDDEDDTQAYLESKYST------SQVRVHWVDYREAAGPCVARRQAQKLYQGEDLYLQIDSHMRFRPGWDCFLINELEKCPSAKPILTTYPLGYTLPNEIST---ECRPTLLCASSFDSLGMLRQTSKILAKK--------STKPLPSLFWAAGFAFS-SSAIIEEVPYDETLRFLFFGEESSMAARLWTSGWDFFTPSEAVVYHLWTRAYRPVFQELESDDTKRYR 574
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A8K1FD38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD38_PYTOL) HSP 1 Score: 308 bits (788), Expect = 7.270e-92 Identity = 219/571 (38.35%), Postives = 305/571 (53.42%), Query Frame = 1
Query: 13 LTPADLFVLGARSGPAAVVKDALMGGA-AARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGI-ADQPDGT-GPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSE-IFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVL 1713
L P++LFVL P +VKD +G + AAR+ + + ++ + + AG+G G + + RGD + W+ +PD T + +LR++ + ++++ EL L TS QLA +PG G +VKH D H SA+ +D+ R +T VYYLNPDW GG LR + + WDV PVLD + +FRS VEHEVLP+F R ALT+W+YG P AA A L P AP A + Q + P T E IFV+I SYRDPE T+ADLL+ A P R+ +G+ L E P R+ I AAGPC AR +A +LW+ E Y LQ DSHMRFR WD LLA L++CPS + ILTTYP GY LPN + + T+ +LC GF GMLRQ ++ + + A +P+ S+ WAAGF F S ++++ YD +LR +FFGEEA+M+ARL+T G+DF+AP + YHLWTRA+RP F+E E+ +T + R ++A+L
Sbjct: 91 LNPSELFVLKHPDSPGFIVKDRFLGHSDAARVRNALVQFAKSAEFHQ-AGVGYGDNKRHEQAARGDRIHWIQRPRDLTRPDATLDAAIVHLLRQVERLVVGVKSAI--PELDLRNVTSTQLAIFPGDGSRFVKHTDTYSSNHP-----SAKGSDNLVR-LITCVYYLNPDWIPAHGGSLRFFVDDKQ----------QWDVPPVLDTLAVFRSRDVEHEVLPTFHERMALTIWYYG--PASAANAPKIPQLHPA---------ISSFLAP-PAPPQVKPQAS-----TTPSSTQEMIFVAIPSYRDPECPHTVADLLAKATHPDRITIGICLQDEDDTMLEHLKETY-----PPTTVRIEWIHYS--HAAGPCVARAMAQSLWKNEQYYLQIDSHMRFRHGWDVELLAQLKQCPSEKAILTTYPLGYTLPNEISS---DTRPALLCASGFDDQGMLRQASKTLTR--------VADKPIPSLFWAAGFAFS-SADVIKEVLYDQSLRFLFFGEEASMSARLWTHGWDFFAPSEMFIYHLWTRAYRPVFQELESEDTKKSRLESLKSVKAML 606
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: W2QK95_PHYPN (Procollagen-lysine 5-dioxygenase n=9 Tax=Phytophthora TaxID=4783 RepID=W2QK95_PHYPN) HSP 1 Score: 306 bits (783), Expect = 3.220e-91 Identity = 208/575 (36.17%), Postives = 299/575 (52.00%), Query Frame = 1
Query: 13 LTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWV-TGGIADQP-DGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSE--IFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHS----GAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVL 1713
L P++LF P V+K+A +G A + G A +GAG D RGD + W+ T + P P + + R++ S+ LR + E+ L S Q A +PG G +VKH+D VH + ++D R +T VYYLN W GG LRVH+ +K L WDV P LD +VLFRS VEHEV+P++ R A+T+W+YG+P +A+ A A T + V P P G+ + T++ IFV+I SYRD E T+ +LL+ A P+R+ +G+ L + G +A + +V +D +AAGPC AR A LW+GE + LQ DSHMRFR WD +L++ L +CPS +PILTTYP GY LPN + T + + T+LC F + GMLRQ ++ ++ + + +PL S+ WAAGF F S ++ YD LR +FFGEE++M ARL+T+G+DF+ P + V YHLWTRA+RP F+E E+ ET R R ++ +L
Sbjct: 69 LNPSELFTFKHPDSPGFVIKEAFLGHREALEVRDALTELATSGTFHDAKVGAGQNLRNDRAVRGDRIHWIQTPSDLNAPAQSIHPAILHLRRQVESLVYGLR--KASPEMDLRNIVSTQFAIFPGDGARFVKHVDTYSNVHKDERGGISKD---GLVRLITCVYYLNDQWEIEHGGYLRVHVKDSK-----HLPACHWDVPPKLDTLVLFRSRDVEHEVMPTYRERKAVTIWYYGKP-SKASSALARTEVLSVPRPL------------------------PSITGNEANHTTQPSIFVAIPSYRDSECRHTVDNLLARATFPERISIGICLQTDENDGTSAYLKSKYST----------SKVCVQWVDYRQAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLISELGKCPSSKPILTTYPLGYTLPNEIST---ECRPTLLCASSFDSLGMLRQTSKILSTK--------STKPLPSLFWAAGFAFS-SSKVIEQVPYDATLRFLFFGEESSMTARLWTSGWDFFTPSETVVYHLWTRAYRPVFQELESGETQRYRSASAHYVKQIL 586 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10100 ID=mRNA_10100|Name=jgi.p|Trimin1|169463|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1989bp|location=Sequence derived from alignment at Contig_64:194462..199501- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TCGAAGCCCGTACTGACCCCTGCCGACTTGTTCGTGCTGGGAGCAAGAAGback to top protein sequence of jgi.p|Trimin1|169463 >Trimin1|169463|e_gw1.64.109.1 ID=Trimin1|169463|e_gw1.64.109.1|Name=jgi.p|Trimin1|169463|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=663bp SKPVLTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRback to top mRNA from alignment at Contig_64:194462..199501- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10100 ID=mRNA_10100|Name=jgi.p|Trimin1|169463|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5040bp|location=Sequence derived from alignment at Contig_64:194462..199501- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_64:194462..199501- >mRNA_10100 ID=mRNA_10100|Name=jgi.p|Trimin1|169463|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1989bp|location=Sequence derived from alignment at Contig_64:194462..199501- (Tribonema minus UTEX_B_3156 )back to top |