mRNA_10337 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350472 vs. uniprot
Match: A0A835YWW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWW7_9STRA) HSP 1 Score: 1022 bits (2643), Expect = 0.000e+0 Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 1
Query: 1 MRRYLNSTDAQIHILRLDPERGRRHIRCLLKDLRRLQLCIYSALQLLLVMLLYFVPGISQSSSEELGYWLDSNNVRKELDRFWQSKGVESSCVPSYLLLQYFEEGGLAWGISQWGGGQRVGQRLGVPVMPSRWAQAVNTTEVQALMANGHLSADSATTGPYGGAAGLVKHGTARFKSVRLQLLARDVRQRFVKPGSVLEGRPKVGYKPRNYWRDFTNLERQIFDFLRVYQPAIGQPMVWLPRRVEFERAGRADIAQAITRLGGPDMVAGRHALVPHSQWAYFDKHLSVLKDLQSYIEQFGVSGYMPPLKELDANGFSRLRDGIAWAGGAKLLAAKLDMQLTPRNHRPTEPPPKVKGLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQSYRRELGEASPAVRRGEAFPWWDSEITMPFRTDLLADRQTKLVLKIEEYGGFENVARRLQLVYEDRDLKELRRLHASAAIQYRAARARQLSIGMQQANGVSSSGSSNSSSSFRSS 1560
MRRYLNSTDAQIHILRLDPERGRRHIRCLLKDLRRLQLCIYSALQLLLVMLLYFVPGISQSSSEELGYWLDSNNVRKELDRFWQSKGVESSCVPSYLLLQYFEEGGLAWGISQWGGGQRVGQRLGVPVMPSRWAQAVNTTEVQALMANGHLSADSATTGPYGGAAGLVKHGTARFKSVRLQLLARDVRQRFVKPGSVLEGRPKVGYKPRNYWRDFTNLERQIFDFLRVYQPAIGQPMVWLPRRVEFERAGRADIAQAITRLGGPDMVAGRHALVPHSQWAYFDKHLSVLKDLQSYIEQFGVSGYMPPLKELDANGFSRLRDGIAWAGGAKLLAAKLDMQLTPRNHRPTEPPPKVKGLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQSYRRELGEASPAVRRGEAFPWWDSEITMPFRTDLLADRQTKLVLKIEEYGGFENVARRLQLVYEDRDLKELRRLHASAAIQYRAARARQLSIGMQQANGVSSSGSSNSSSSFRSS
Sbjct: 1 MRRYLNSTDAQIHILRLDPERGRRHIRCLLKDLRRLQLCIYSALQLLLVMLLYFVPGISQSSSEELGYWLDSNNVRKELDRFWQSKGVESSCVPSYLLLQYFEEGGLAWGISQWGGGQRVGQRLGVPVMPSRWAQAVNTTEVQALMANGHLSADSATTGPYGGAAGLVKHGTARFKSVRLQLLARDVRQRFVKPGSVLEGRPKVGYKPRNYWRDFTNLERQIFDFLRVYQPAIGQPMVWLPRRVEFERAGRADIAQAITRLGGPDMVAGRHALVPHSQWAYFDKHLSVLKDLQSYIEQFGVSGYMPPLKELDANGFSRLRDGIAWAGGAKLLAAKLDMQLTPRNHRPTEPPPKVKGLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQSYRRELGEASPAVRRGEAFPWWDSEITMPFRTDLLADRQTKLVLKIEEYGGFENVARRLQLVYEDRDLKELRRLHASAAIQYRAARARQLSIGMQQANGVSSSGSSNSSSSFRSS 520
BLAST of jgi.p|Trimin1|350472 vs. uniprot
Match: A0A4D9CZ74_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ74_9STRA) HSP 1 Score: 142 bits (359), Expect = 4.550e-33 Identity = 119/431 (27.61%), Postives = 190/431 (44.08%), Query Frame = 1
Query: 199 GYWLDSNNVRKELDRFWQSKGVESSCVPSYLLLQYFEEGGLAWGISQWGGGQRVGQRLGVPVMPSRWAQAVNTTEVQALM-------------------------ANGH-LSADSATTGPYGGAAGLVKHGTARFKSVRLQLLARDVRQRFVKPGSVLEGRPKVG-YKPRNYWRDFTNLERQIFDFLRVYQPAIGQPMVWLPRRVEFERAGRADIAQAITRLGGPDMVAGRHALVPHSQWAYFDKHLSVLKDLQSYI-EQFGVSGYMPPLKELDANGFSRLRDGIAWAGGAKLLAAKLDMQLTPRNHRPTEPPPKVKGLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQSYRRELGEASPAVRRGEAFPWWDSEITMPFRTDLLADRQTKLVLKIEEYGGFENVARRLQLVYE 1407
GYW D + ++ ++ FW V SS +P+ +LL+ ++ GL I + GG + + L +P + A+ EVQAL+ A H L GP GGA L R K+VR + KP +GRP Y+ R W L + + + ++ P+++ P+ + GRA++ I R GG + V +P SQW YF + ++KDL++Y+ E+ G S MP L+++ G+ RL +A GG KL+AA+L + L A + + G+ + +G FD DF V L+EY+ ++ + + E + A R E + +P +L+ D + L+ KI YGGFENVARRLQL ++
Sbjct: 105 GYWKDISQIKVSVEEFWTRLNVTSSAIPNEMLLRLYDAHGLRHAIYKQGGRETLAYLLETDYIPGDFRVAMKFPEVQALVEAGVVVPPASPENKVLLDSPSLPPSAQAHPLQERRLVIGPRGGAVIL----NERLKNVRFP-------PSYGKPDG--QGRPGGWKYQNRTVW-SIEKLAEECYTLAEEHSASLHVPLLFFPKLSDLVGWGRANMINTIRRYGGYEAVISSLGFIPFSQWNYFCRFYLLMKDLKTYLDEEEGGSRQMPTLRDVKRAGYHRLYSEVARNGGRKLVAARLGLPLK-------------------------------AGSGEKGKFATMISYGAFDFDFGVALLEYIMNKCWAQHPRERA-ARREKERV-----NLFLPTAEELVGDERQDLLEKIVRYGGFENVARRLQLGFK 484
BLAST of jgi.p|Trimin1|350472 vs. uniprot
Match: W7T9M4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9M4_9STRA) HSP 1 Score: 142 bits (358), Expect = 2.760e-32 Identity = 117/431 (27.15%), Postives = 191/431 (44.32%), Query Frame = 1
Query: 199 GYWLDSNNVRKELDRFWQSKGVESSCVPSYLLLQYFEEGGLAWGISQWGGGQRVGQRLGVPVMPSRWAQAVNTTEVQALMANGHLSADSA--------------------------TTGPYGGAAGLVKHGTARFKSVRLQLLARDVRQRFVKPGSVLEGRPKVG-YKPRNYWRDFTNLERQIFDFLRVYQPAIGQPMVWLPRRVEFERAGRADIAQAITRLGGPDMVAGRHALVPHSQWAYFDKHLSVLKDLQSYI-EQFGVSGYMPPLKELDANGFSRLRDGIAWAGGAKLLAAKLDMQLTPRNHRPTEPPPKVKGLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQSYRRELGEASPAVRRGEAFPWWDSEITMPFRTDLLADRQTKLVLKIEEYGGFENVARRLQLVYE 1407
GYW D + ++ ++ FW V SS +P+ +LL+ ++ GL I + GG + + L +P + A+ EVQAL+ G + ++ GP GGA L R K+VR + KP +GRP Y+ R W L + + + ++ P+++ P+ + GRA++ I R GG + V +P SQW YF + ++KDL++Y+ E+ G S MP L+++ G+ RL +A GG KL+AA+L + L A + + G+ + +G FD DF V L+EY+ ++ + + E + A R E + +P +L+ D + L+ KI YGGFENVARRLQL ++
Sbjct: 245 GYWKDISQIKVSVEEFWTRLNVTSSAIPNEMLLRLYDAHGLRHAIYKQGGRETLAYLLETDYIPGDFRVAMKFPEVQALVEAGVIVPPASPENKVLLDSPSLPPSAHAYPLQERRLVIGPRGGAVIL----NERLKNVRFP-------PSYGKPDG--QGRPGGWKYQNRTVW-SIEKLAEECYALAEEHSASLHVPLLFFPKLSDLVGWGRANMINTIRRYGGYEAVISSLGFIPFSQWNYFCRFYLLMKDLKTYLDEEEGGSRQMPTLRDVKRAGYHRLYSEVARNGGRKLVAARLGLPLK-------------------------------AGSGEKGKFATMISYGAFDFDFGVALLEYIMNKCWAQHPRERA-ARREKERV-----NLFLPTAEELVVDERQDLLEKIVRYGGFENVARRLQLGFK 624
BLAST of jgi.p|Trimin1|350472 vs. uniprot
Match: A0A6V1TD88_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TD88_HETAK) HSP 1 Score: 124 bits (310), Expect = 2.740e-28 Identity = 90/279 (32.26%), Postives = 132/279 (47.31%), Query Frame = 1
Query: 610 VGYKPRN-YWRDFTNLERQIFDFLRVYQPAIGQPMVWLPRRVEFERAGRADIAQAITRLGGPDMVAGRHALVPHSQWAYFDKHLSVLKDLQSYIEQFG-VSGYMPPLKELDANGFSR-LRDGIAWAGGAKLLAAKLDMQLTPRNHRPTEPPPKVKGLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQSYRRELGEASPAVRRGEAFPWWDSEITMPFRTDLLADRQTKLVLKIEEYGGFENVARRLQLVYEDRDLKELRRL 1437
VG K ++ YW ++ F Y A+GQP+ W+PR V+F RAGR D+ AI+R GG D R LVP+ +W YFD++ ++ DL +Y+ + G + MP L+ + R L ++ GG L+ +L + LT R AA D + +G F L+FAV+++EY+K + G + A P + +P DL A + L IE+YGG + VARRL LVYED L+E R L
Sbjct: 7 VGRKKKSLYWTSERAFRAEMHHFCAEYMGALGQPVSWMPRLVDFRRAGRDDLVAAISRYGGTDDACARFGLVPYREWGYFDRNRALASDLLAYLREKGWPTDTMPDRATLEGDARGRDLNRRLSRLGGRSLVGRRLGLALTGR----------------------------AAFYNDK------INYGPFSLEFAVEVLEYIKETHFAAAPGAWASADMLD---PETVGAVALPPPGDLRAHGRRDLADLIEDYGGPQQVARRLGLVYEDDFLEEEREL 248
BLAST of jgi.p|Trimin1|350472 vs. uniprot
Match: A0A7S1BRF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRF2_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.260e-23 Identity = 106/436 (24.31%), Postives = 167/436 (38.30%), Query Frame = 1
Query: 202 YWLDSNNVRKELDRFWQSKGV-------------ESSC-------------VPSYLLLQYFEEGGLAWGISQWGGGQRVGQRLG-VPVMPSRWAQAVN-TTEVQALMANGHLSADSATTGPYGGAAGLVKHGTA---RFKSVRLQLL-----------------------------------ARDVRQRFV---------------------KPGSVLEGRPKVGYKPRN------YWRDFTNLERQIFDFLRVYQPAIGQPMVWLPRRVEFERAGRADIAQAITRLGGPDMVAGRHALVPHSQWAYFDKHLSVLKDLQSYIEQFGVSGYMPPLKELDANGFSRLRDGIAWAGGAKLLAAKLDMQLT-----PRNHRPTEPPPKVKGLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQ 1215
YW + +NV +E FW++ GV E+ C +PS LL Y++ L W I+ GG + +RLG +PV+P RWA AV + EV+ L+ ++ + G + G + A R+K+ + LL RDV ++ K +E + +K R+ YW D T L +I++F+ Y G+P +W+PR +F GR DI +AI R GG D V R+ L+P +W YF+ + L + ++G P L E+ G L I GG K +A + D+++ PR+H + WG F L FA++LME+V+ +
Sbjct: 27 YWENLDNVEREFHEFWENIGVGKEHYATMQPKTQETDCDGATDAPKNPRPSIPSESLLNYYDRHDLRWAITTHGGRDALSERLGSLPVVPGRWADAVRWSPEVRCLL---DMAEAAGYEGNWVGLRWDLPPSNAYHERYKARKQNLLPGTERAYWNSRMFKKQATGTPSKLPAFSGLGSVPGVRDVPLDWMEEMMPENKRSSDRANILELPGKESETVEKTVRQRWKHRSNRKRYGYWNDDT-LRSEIYEFIARYMEYSGRPAIWMPRLADFAAHGRPDIQKAIVRFGGADAVCARYGLIPFQEWQYFESLYQLCVGLDGFARRYGSGEEFPSLAEVRGCGLLDLYHLIQKNGGKKAVARRFDLKVAKGEPGPRSHLSE------------------------------------INWGPFSLQFALELMEFVRGR 422
BLAST of jgi.p|Trimin1|350472 vs. uniprot
Match: A0A7S2KN41_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KN41_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.380e-20 Identity = 72/240 (30.00%), Postives = 112/240 (46.67%), Query Frame = 1
Query: 700 GQPMVWLPRRVEFERAGRADIAQAITRLGGPDMVAGRHALVPHSQWAYFDKHLSVLKDLQSYIEQF--GVSGYMPPLKELDANGFSRLRDGIAWAGGAKLLAAKLDMQL---TPRNHRPTEPPPKVKGLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQSYRRELGEASPAVRRGEAFPWWDSEITMPFRTDLL--ADRQTKLVLKIEEYGGFENVARRLQL 1398
G+P +++PR +F GR D+ AI R GGP+++ R ++ + +W YF+ S+ L++YI+ + G + PPLKE+ + G RL + I GG K++A + M+L TP N + P + WG F LDF++ LM +++SQ L + P I MP L+ ++ L KIEE+GG+EN ARRL L
Sbjct: 4 GRPSIFMPRLNDFSAHGRDDLRAAIVRSGGPEVLCERAGMISYREWEYFESLYSLYSGLKAYIDIYHEGNTEVFPPLKEIKSKGQRRLYNLIQKHGGRKIVAGRAGMKLSKATPTNSGNRQTPV--------------------------------MQWGPFSLDFSLLLMNFIRSQM----LKQIPPLAMT--------PTIKMPTEEILMRSGEQGRYLARKIEEFGGYENTARRLGL 199
BLAST of jgi.p|Trimin1|350472 vs. uniprot
Match: A0A7S0DXF9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DXF9_9CRYP) HSP 1 Score: 94.7 bits (234), Expect = 2.880e-17 Identity = 70/225 (31.11%), Postives = 102/225 (45.33%), Query Frame = 1
Query: 718 LPRRVEFERAGRADIAQAITRLGGPDMVAGRHALVPHSQWAYFDKHLSVLKDLQSYIEQFGVSGYMPPLKELDANGFSRLRDGIAWAGGAKLLAAKLDMQLTPRNHRPTEPPPKVKGLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQSYRRELGEASPAVRRGEAFPWWDSEITMPFRTDLLADRQTKLVLKIEEYGGFENVARRL 1392
LP + + +GR DI AI R GG +A + + S++ Y + +LK+L++Y ++ G G MPP K+L A+G L I GG +LAA+LD+Q+ R +P + WG F +DFA+DL+E G V +GE I MP T L A +T ++ KIE YGGF +VARR+
Sbjct: 205 LPSNADLKESGRTDIINAIYRYGGRKHIAKKFGFLLASEYNYLVEFYFLLKELRAYQQEKGQLGKMPPFKQLTADGRRDLMRMICKHGGQNVLAARLDLQMDVR-RKPY------------------------------------LYWGPFSIDFAIDLIEIA---------GRHCEEVGQGE-------RILMPNATTLQAINRTDMIEKIEYYGGFVDVARRV 376
BLAST of jgi.p|Trimin1|350472 vs. uniprot
Match: K0S9S6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S9S6_THAOC) HSP 1 Score: 94.7 bits (234), Expect = 8.070e-17 Identity = 120/457 (26.26%), Postives = 181/457 (39.61%), Query Frame = 1
Query: 202 YWLDSNNVRKELDRFWQSKGVESSC----VPSYLLLQYFEEGGLAWGISQWGGGQRVGQRLG-VPVMPSRWAQAVNTTEVQAL---MANGHLSADSATTGPYGGAAGLVKHGTARFKSVRLQLLARDVRQRFVKPGSVLEGRPKVGYKPR--NYWRDFTNLERQIFDFLRVYQPAIGQPMVWLPRRVEFERAGRADIAQAITRLGG-----------PDMVAGRHA--LVPHSQWAY---------------------FDKHLSVLKDLQSYIEQF-GVSGYMPPLKELDANGFSRLRDGIAWAGGAKLLAAK--LDMQLTPRNHRPTEPPPKVKGLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQSYRRELGEASPAVRRGEAFPWWDSEITMPFRTDLLADRQTKLVLKIEEYGGFENVARRLQLVYEDRDLKELR 1431
YW +NVR EL FW GV +P+ +L +F GL W I+Q GG + V ++LG V V+P +W +A EV+ L MAN + D + G R +D R+ + L R K G NY+ N ++++ +L Y+ +P VW+P+ E + G + A+ R + + RH LVP +W + F+ L L +L+ Y+E + G MP ++ D RL+D + GG LL+ K L +Q R+ T +TA GV +G F L++A++L+ +V+S ASP +R MP DL + L + E+GG ENVARRL L Y D + E R
Sbjct: 44 YWQSIDNVRLELASFWVECGVHVDQSLPPIPNEKILNFFGLNGLRWAIAQLGGRENVARQLGGVLVIPGKWEEAKELDEVKRLLPYMANYTTNDDK-------------EKGDKR----------KDARKTTSETIFELAPRMKCGSTAMKTNYFWSKENAIKELYRYLESYKVLRRRPSVWMPKVEEVKAEGFLRLFNALNRFNKLPSSGDYATIFSEEESVRHVAGLVPFQEWRWVEYSCLRGRIIAYIDVLLSRCFESQLQFLVELRRYLELYHGGDEIMP--EDCDNE---RLQDLMRMLGGKVLLSQKYSLPLQWETRSDDTTT-------ITA-----------------------SGVDFGLFSLEYAIELLCFVRSSYLDLSPPLASPQMR-------------MPSIEDLRRCGRNDLADQTIEFGGLENVARRLGLAYGDISVDEER 429
BLAST of jgi.p|Trimin1|350472 vs. uniprot
Match: L1JX09_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JX09_GUITC) HSP 1 Score: 82.8 bits (203), Expect = 1.850e-13 Identity = 72/243 (29.63%), Postives = 104/243 (42.80%), Query Frame = 1
Query: 718 LPRRVEFERAGRADIAQAITRLGGPDMVAGRHALVPHSQWAYFDKHLSVLKDLQSYIEQFGVSGYMPPLKELDANGFSRLRDGIAWAGGAKLLAAKLDMQLTPRNHRPTEPPPKVKGLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQSYRRELGEASPAVRRGEAFPWWDSE-ITMPFRTDLLADRQTKLV---------------LKIEEYGGFENVARRLQL 1398
LP + + GR D+ AI R GG +A + L+ +++ Y + +LK+L+SY E+ G MP K+L ANG L I GG +LAA+LD+QL RP +P +VWG F +DFA+DL+E L A + + +E I MP T L + + L+ L+IE YGGF +VARR+ L
Sbjct: 140 LPSNADLKENGRKDLINAIYRYGGRKHIAKKFGLLLTTEFNYLVEFYHLLKELRSYQEEKQQLGKMPSFKQLIANGRQDLARMICKHGGQNVLAARLDLQL----DRPRKPY---------------------------------LVWGQFSIDFAIDLIEIAGVSIMGTSLFLAKMHTLQQHSQDIGRTERILMPNATTLQSIHRADLIEKASIALEASFCDTPLQIEMYGGFVDVARRIGL 345
BLAST of jgi.p|Trimin1|350472 vs. uniprot
Match: UPI001F55A29E (DEAD/DEAH box helicase family protein n=6 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001F55A29E) HSP 1 Score: 82.8 bits (203), Expect = 1.050e-12 Identity = 76/277 (27.44%), Postives = 126/277 (45.49%), Query Frame = 1
Query: 619 KPRNYWRDFTNLERQIFDFLRVYQPAIGQPMVWLPRRVEFERAGRADIAQAITRLGGPDMVAGRHALV-PHSQWAYFDKHLSVLKDLQSYIEQFGVSGYMPPLKELDANGFSRLRDGIAWA-GGAKLLAAKLDMQLTPRNHRPTEPPPKVK----------GLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQSYRRELGEASPAVRRGEAFPWWDSEIT---MPFRTDLLADRQTKLVLKIEEYGGFENVARRLQLVY 1404
KP +YW + TNLER++ F+ + +G +PR +EF +AGR+D+A A+ + GG VA + L + Y+D+ +V ++L ++IE+ GV G MP +EL G+ L + I GG +A +L + R ++ VK G ++ T+ E A A + + GG +L+ R L + GE + + + T MP + +L ++T L I +GGF VA RL+L +
Sbjct: 6 KPNSYWDELTNLERELMAFINEHG-TLGL----MPRAIEFVKAGRSDLANAMRKHGGFQSVAEKLGLTYARKRPGYWDEFTNVKQNLFAFIEKNGVFGVMPTKQELQTAGYGDLANAIEGEYGGYAAVAKRLGLTCAKRQRGYSDDINNVKHEILAFVEKHGTPGVMPTEGELKKAGQGALLGAVKKHGGT-------HKVAELLGLACVNRQRGSLNDFECFA--GELLAFIEKQGTAGVMPTQKELAKAKKTSLASAIARHGGFPTVAERLKLKF 268 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350472 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10337 ID=mRNA_10337|Name=jgi.p|Trimin1|350472|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1784bp|location=Sequence derived from alignment at Contig_63:768142..781023- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGGAGATACCTCAACAGCACAGACGCCCAGATCCACATTCTGCGCTTback to top protein sequence of jgi.p|Trimin1|350472 >Trimin1|350472|estExt_Genemark1.C_Ctg_630095 ID=Trimin1|350472|estExt_Genemark1.C_Ctg_630095|Name=jgi.p|Trimin1|350472|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=521bp MRRYLNSTDAQIHILRLDPERGRRHIRCLLKDLRRLQLCIYSALQLLLVMback to top mRNA from alignment at Contig_63:768142..781023- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10337 ID=mRNA_10337|Name=jgi.p|Trimin1|350472|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=12882bp|location=Sequence derived from alignment at Contig_63:768142..781023- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_63:768142..781023- >mRNA_10337 ID=mRNA_10337|Name=jgi.p|Trimin1|350472|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1563bp|location=Sequence derived from alignment at Contig_63:768142..781023- (Tribonema minus UTEX_B_3156 )back to top |