Trimin1|350454|estExt_Genemark1.C_Ctg_630051 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350454
Unique NameTrimin1|350454|estExt_Genemark1.C_Ctg_630051
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length254
Homology
BLAST of jgi.p|Trimin1|350454 vs. uniprot
Match: A0A835YMR0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR0_9STRA)

HSP 1 Score: 501 bits (1289), Expect = 4.200e-179
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query:    1 MSAKRAAAEAAAAENEGGVDVKRLKRTLTQESDVKIYETNIHETMKTFPTLRECRRQDYNRCITLFALADHARDRRNKVFAFFNSHVSQPNSFQTDEVFRVSEEVLSVLDESREQLELVTNWCDLCLPANETAFAEAHRLKLQDFQDYLSGGVTGIVNSINEVNSQLEKRAQTLQLLFTTKDVLPENRTGWIRAHRDLLVHSETNAYLQVAKIWEKVLEDYVLYYNYWKTNIKDGDLAFGNQGKSERGSDYFG 253
            MSAKRAAAEAAAAENEGGVDVKRLKRTLTQESDVKIYETNIHETMKTFPTLRECRRQDYNRCITLFALADHARDRRNKVFAFFNSHVSQPNSFQTDEVFRVSEEVLSVLDESREQLELVTNWCDLCLPANETAFAEAHRLKLQDFQDYLSGGVTGIVNSINEVNSQLEKRAQTLQLLFTTKDVLPENRTGWIRAHRDLLVHSETNAYLQVAKIWEKVLEDYVLYYNYWKTNIKDGDLAFGNQGKSERGSDYFG
Sbjct:    1 MSAKRAAAEAAAAENEGGVDVKRLKRTLTQESDVKIYETNIHETMKTFPTLRECRRQDYNRCITLFALADHARDRRNKVFAFFNSHVSQPNSFQTDEVFRVSEEVLSVLDESREQLELVTNWCDLCLPANETAFAEAHRLKLQDFQDYLSGGVTGIVNSINEVNSQLEKRAQTLQLLFTTKDVLPENRTGWIRAHRDLLVHSETNAYLQVAKIWEKVLEDYVLYYNYWKTNIKDGDLAFGNQGKSERGSDYFG 253          
BLAST of jgi.p|Trimin1|350454 vs. uniprot
Match: A0A836C7X8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X8_9STRA)

HSP 1 Score: 361 bits (926), Expect = 6.140e-124
Identity = 170/232 (73.28%), Postives = 203/232 (87.50%), Query Frame = 0
Query:   22 KRLKRTLTQESDVKIYETNIHETMKTFPTLRECRRQDYNRCITLFALADHARDRRNKVFAFFNSHVSQPNSFQTDEVFRVSEEVLSVLDESREQLELVTNWCDLCLPANETAFAEAHRLKLQDFQDYLSGGVTGIVNSINEVNSQLEKRAQTLQLLFTTKDVLPENRTGWIRAHRDLLVHSETNAYLQVAKIWEKVLEDYVLYYNYWKTNIKDGDLAFGNQGKSERGSDYFG 253
            K+L+R LT E+D+K+YE NIHETM+  P LR+   QDY +C+TLF+  D A+DRR KVFAFF++++++  S+QTD+VF++SEEVLSVLDE RE LEL+ NWCDLCLPANETAFAEA R+K+QDFQ+YLSGGVTG+ NS NEVN QLEKRA+TLQLLFTTKDVLPENR GWI+AHRDLLVH ETNAYL++AKIWEKVLEDYVLY+NYWKTN+KDGDLAF + GK ERG DYFG
Sbjct:   13 KKLRRQLTHEADIKVYERNIHETMQELPKLRDACEQDYTKCVTLFSTDDSAKDRRTKVFAFFDANITEATSYQTDQVFKLSEEVLSVLDECRELLELLMNWCDLCLPANETAFAEALRIKIQDFQEYLSGGVTGLANSTNEVNLQLEKRARTLQLLFTTKDVLPENRAGWIKAHRDLLVHCETNAYLRMAKIWEKVLEDYVLYFNYWKTNLKDGDLAFAHMGKGERGGDYFG 244          
BLAST of jgi.p|Trimin1|350454 vs. uniprot
Match: D7G572_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G572_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 1.940e-97
Identity = 142/232 (61.21%), Postives = 183/232 (78.88%), Query Frame = 0
Query:   22 KRLKRTLTQESDVKIYETNIHETMKTFPTLRECRRQDYNRCITLFALADHARDRRNKVFAFFNSHVSQPNSFQTDEVFRVSEEVLSVLDESREQLELVTNWCDLCLPANETAFAEAHRLKLQDFQDYLSGGVTGIVNSINEVNSQLEKRAQTLQLLFTTKDVLPENRTGWIRAHRDLLVHSETNAYLQVAKIWEKVLEDYVLYYNYWKTNIKDGDLAFGNQGKSERGSDYFG 253
            KRLKR LTQESD+K+YE NIH+ MK  P  RE R++D+ R +TLFA    A+DRRNKVF +F+  V++ N FQ  EV+ VS+++LSVLDE+RE LEL+ NWCDLCLPANE AFAEAHR+K+Q FQDYLS G++ +V+   ++N+QL+KRAQTL+ LF+TKDVLPEN+ GW R HR++LVH E NAYL  A  WEK+LEDY+LYYNY+K N+KD  + F ++GK   G+DYFG
Sbjct:   90 KRLKRLLTQESDLKVYEANIHDMMKQMPAQRERRKKDFERVLTLFASDSLAKDRRNKVFEYFDKAVTKANCFQVKEVYSVSQDLLSVLDEARETLELLVNWCDLCLPANEQAFAEAHRIKIQHFQDYLSAGLSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYRLHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEGKGG-GNDYFG 320          
BLAST of jgi.p|Trimin1|350454 vs. uniprot
Match: D8LE75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE75_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 2.380e-60
Identity = 104/229 (45.41%), Postives = 144/229 (62.88%), Query Frame = 0
Query:   24 LKRTLTQESDVKIYETNIHETMKTFPTLRECRRQDYNRCITLFALADHARDRRNKVFAFFNSHVSQPNSFQTDEVFRVSEEVLSVLDESREQLELVTNWCDLCLPANETAFAEAHRLKLQDFQDYLSGGVTGIVNSINEVNSQLEKRAQTLQLLFTTKDVLPENRTGWIRAHRDLLVHSETNAYLQVAKIWEKVLEDYVLYYNYWKTNIKDGDLAFGNQGKSERGSDYF 252
            L+R+L  E+D K+YE N+H+TM  FP LR+ R+ DY R   L    D+AR+RR KVF +FN  +S+ N+FQT E++ VS E+L ++DE RE L+ + +WCDLCLP N+ AFAE+HR K+Q FQ          V  + E+      R+Q         +V   N   W +AH DLL   E NAYLQ+ + WE++LE  +L YNYWK N+KD ++ FG+ GKS  G+DYF
Sbjct:    2 LQRSLGAETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQ----------VQIVQEMKRSNSARSQ---------EVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKST-GNDYF 210          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350454 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YMR0_9STRA4.200e-179100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7X8_9STRA6.140e-12473.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G572_ECTSI1.940e-9761.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LE75_ECTSI2.380e-6045.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_63contigContig_63:463889..470737 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350454mRNA_10304Tribonema minus UTEX_B_3156 mRNAContig_63 463859..470873 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350454|estExt_Genemark1.C_Ctg_630051 ID=Trimin1|350454|estExt_Genemark1.C_Ctg_630051|Name=jgi.p|Trimin1|350454|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=254bp
MSAKRAAAEAAAAENEGGVDVKRLKRTLTQESDVKIYETNIHETMKTFPT
LRECRRQDYNRCITLFALADHARDRRNKVFAFFNSHVSQPNSFQTDEVFR
VSEEVLSVLDESREQLELVTNWCDLCLPANETAFAEAHRLKLQDFQDYLS
GGVTGIVNSINEVNSQLEKRAQTLQLLFTTKDVLPENRTGWIRAHRDLLV
HSETNAYLQVAKIWEKVLEDYVLYYNYWKTNIKDGDLAFGNQGKSERGSD
YFG*
back to top