mRNA_10275 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Match: A0A835YM80_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM80_9STRA) HSP 1 Score: 2254 bits (5840), Expect = 0.000e+0 Identity = 1848/1848 (100.00%), Postives = 1848/1848 (100.00%), Query Frame = 1
Query: 1 MSSGRKRPHSALVAVDDDLEEGELPPTEDEAAERAERRKDADLRTPAERLAMIVVERLLKVKKMDSWTDADYRLKSVQGESAELLEVLGRSTIMDLLFSTTCELEGLMSRLSGGAAVIAAIAQAHKIVCGAAQFVKFGPGLSVRVCAPQLRAIIEALSEELEPDVGGLLEADTKVVGKAFTQLDAMLRVLEGWDQRQLEFRSVGKAKSGXXXXXXXXXXXXXXXXXGEEVPQTDLLRRLLNATHQKWKPITRATQVAAPTAXXXXXXXXXXXXXXXXXXPTWPXXXXXXXXXXXXXFMRVMSVPQAQPLHAASALQQTXXXXXXXXXXXXXXXXXXXXVSGPLAARSLLPGQLAPPPFMQLPMISAAAAAAAQQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKPEPKVEDTKMEPTAELIRMIEEQRAPLKYERFALHAPTPQAKQPLVTTAALQPKRESPTMQLPAQPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMQXXXXXXXXXXXXTPHAPAHKDLLPEPAHSPARSDRGDGDSAMEVDNDAKANGDGDDALSADARENGLEIVDDEGAPPSLXXXXXXXXXXXXXXXXXXXXXXXXXXGPPRFSARVVVAYIDANTKPHELVMAEKRLEELKLGSNELASAXXXXXXXXXXXXXXXXXXXXXAGKDWDISAEQRAAGACGEHRFRYRNASSPGCGLCERAHVPICGACSQCVRCYREGRFGPACRESSDDSGRWSPPAGAAXXXXXXXXXXXXXXXXXXILRKPKPEIAGDAWRPGRSKKDGGSXXXXXXXXXAGPKLHTLQGRVDRAIYEAFTSDGKEESFAALLSLLRYSGLHNYRRQTGETALHAAAYHGALRAARALLDGGAEAGASDSHGNTPLDLARQRMHADMMALLERRLSGGGXXXXXXXXXQAQAQQPLPQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIFDYSKLPPPRPLLPXXXXXXXXXXXLNFLASMGAPRPPAAPVGSAQQPTPQAATQKVPPAGGPGSYVQPQQXXXXXXXXXXXXXXXXXXRPQLPPQIPELVRRTSVEAAEWASSRASPPLDLQQRXXXXXXXXXXXXXXLVPVAQAVVQQPQPSNDRAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVPAAQTAGTXXXXXXXXXXXQQVRPRRSGTGIGSLAAFSSMPFQQPVQQXXXXRPYPHDVNSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQASSVGQLRGKDGFATDGGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDAVGGRGAGGSGVTLAGLKRSLSDADSSDGDFGAVSAXXXXXXXXXXXXGEKLRRSDYGLAQXXXXXXXXXXXXXXXXXXSSGGRRSLSPVAGGGDGDGGGSWRGGERGWLEHRGDAGKRRAAEMDMSGRGFASNSSSSRWLEDERDSGDRGGALGYPEDDWLTGGVGGMRSGATGGSGYGGSRSAVRSTADDPRRARXXXXXXXXXXXXXXAAASGLRGDPRVMERSRSSSARGAAFDPRDHDWDGRLGGSPGDGGSDGEYGYAVDERLWAERAVIDERLVAREGSSRMAVARGSXXXXXXXXXXXXXXXXXXARREFSQRDVAQHEFMRAEHGRGPWLERPAAREAFVDDAWDDRHSGGAGAYGAMGMDVERGALDWPEHNGGADGHSXXXXXXXXXXXXXXXXXPPQPKPVYGLRKNGKVRGSKSNPKARGCKAGKNRKNKGAAGWVVINNVG 5544
MSSGRKRPHSALVAVDDDLEEGELPPTEDEAAERAERRKDADLRTPAERLAMIVVERLLKVKKMDSWTDADYRLKSVQGESAELLEVLGRSTIMDLLFSTTCELEGLMSRLSGGAAVIAAIAQAHKIVCGAAQFVKFGPGLSVRVCAPQLRAIIEALSEELEPDVGGLLEADTKVVGKAFTQLDAMLRVLEGWDQRQLEFRSVGKAKSGXXXXXXXXXXXXXXXXXGEEVPQTDLLRRLLNATHQKWKPITRATQVAAPTAXXXXXXXXXXXXXXXXXXPTWPXXXXXXXXXXXXXFMRVMSVPQAQPLHAASALQQTXXXXXXXXXXXXXXXXXXXXVSGPLAARSLLPGQLAPPPFMQLPMISAAAAAAAQQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKPEPKVEDTKMEPTAELIRMIEEQRAPLKYERFALHAPTPQAKQPLVTTAALQPKRESPTMQLPAQPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMQXXXXXXXXXXXXTPHAPAHKDLLPEPAHSPARSDRGDGDSAMEVDNDAKANGDGDDALSADARENGLEIVDDEGAPPSLXXXXXXXXXXXXXXXXXXXXXXXXXXGPPRFSARVVVAYIDANTKPHELVMAEKRLEELKLGSNELASAXXXXXXXXXXXXXXXXXXXXXAGKDWDISAEQRAAGACGEHRFRYRNASSPGCGLCERAHVPICGACSQCVRCYREGRFGPACRESSDDSGRWSPPAGAAXXXXXXXXXXXXXXXXXXILRKPKPEIAGDAWRPGRSKKDGGSXXXXXXXXXAGPKLHTLQGRVDRAIYEAFTSDGKEESFAALLSLLRYSGLHNYRRQTGETALHAAAYHGALRAARALLDGGAEAGASDSHGNTPLDLARQRMHADMMALLERRLSGGGXXXXXXXXXQAQAQQPLPQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIFDYSKLPPPRPLLPXXXXXXXXXXXLNFLASMGAPRPPAAPVGSAQQPTPQAATQKVPPAGGPGSYVQPQQXXXXXXXXXXXXXXXXXXRPQLPPQIPELVRRTSVEAAEWASSRASPPLDLQQRXXXXXXXXXXXXXXLVPVAQAVVQQPQPSNDRAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVPAAQTAGTXXXXXXXXXXXQQVRPRRSGTGIGSLAAFSSMPFQQPVQQXXXXRPYPHDVNSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQASSVGQLRGKDGFATDGGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDAVGGRGAGGSGVTLAGLKRSLSDADSSDGDFGAVSAXXXXXXXXXXXXGEKLRRSDYGLAQXXXXXXXXXXXXXXXXXXSSGGRRSLSPVAGGGDGDGGGSWRGGERGWLEHRGDAGKRRAAEMDMSGRGFASNSSSSRWLEDERDSGDRGGALGYPEDDWLTGGVGGMRSGATGGSGYGGSRSAVRSTADDPRRARXXXXXXXXXXXXXXAAASGLRGDPRVMERSRSSSARGAAFDPRDHDWDGRLGGSPGDGGSDGEYGYAVDERLWAERAVIDERLVAREGSSRMAVARGSXXXXXXXXXXXXXXXXXXARREFSQRDVAQHEFMRAEHGRGPWLERPAAREAFVDDAWDDRHSGGAGAYGAMGMDVERGALDWPEHNGGADGHSXXXXXXXXXXXXXXXXXPPQPKPVYGLRKNGKVRGSKSNPKARGCKAGKNRKNKGAAGWVVINNVG
Sbjct: 1 MSSGRKRPHSALVAVDDDLEEGELPPTEDEAAERAERRKDADLRTPAERLAMIVVERLLKVKKMDSWTDADYRLKSVQGESAELLEVLGRSTIMDLLFSTTCELEGLMSRLSGGAAVIAAIAQAHKIVCGAAQFVKFGPGLSVRVCAPQLRAIIEALSEELEPDVGGLLEADTKVVGKAFTQLDAMLRVLEGWDQRQLEFRSVGKAKSGXXXXXXXXXXXXXXXXXGEEVPQTDLLRRLLNATHQKWKPITRATQVAAPTAXXXXXXXXXXXXXXXXXXPTWPXXXXXXXXXXXXXFMRVMSVPQAQPLHAASALQQTXXXXXXXXXXXXXXXXXXXXVSGPLAARSLLPGQLAPPPFMQLPMISAAAAAAAQQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKPEPKVEDTKMEPTAELIRMIEEQRAPLKYERFALHAPTPQAKQPLVTTAALQPKRESPTMQLPAQPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMQXXXXXXXXXXXXTPHAPAHKDLLPEPAHSPARSDRGDGDSAMEVDNDAKANGDGDDALSADARENGLEIVDDEGAPPSLXXXXXXXXXXXXXXXXXXXXXXXXXXGPPRFSARVVVAYIDANTKPHELVMAEKRLEELKLGSNELASAXXXXXXXXXXXXXXXXXXXXXAGKDWDISAEQRAAGACGEHRFRYRNASSPGCGLCERAHVPICGACSQCVRCYREGRFGPACRESSDDSGRWSPPAGAAXXXXXXXXXXXXXXXXXXILRKPKPEIAGDAWRPGRSKKDGGSXXXXXXXXXAGPKLHTLQGRVDRAIYEAFTSDGKEESFAALLSLLRYSGLHNYRRQTGETALHAAAYHGALRAARALLDGGAEAGASDSHGNTPLDLARQRMHADMMALLERRLSGGGXXXXXXXXXQAQAQQPLPQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIFDYSKLPPPRPLLPXXXXXXXXXXXLNFLASMGAPRPPAAPVGSAQQPTPQAATQKVPPAGGPGSYVQPQQXXXXXXXXXXXXXXXXXXRPQLPPQIPELVRRTSVEAAEWASSRASPPLDLQQRXXXXXXXXXXXXXXLVPVAQAVVQQPQPSNDRAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVPAAQTAGTXXXXXXXXXXXQQVRPRRSGTGIGSLAAFSSMPFQQPVQQXXXXRPYPHDVNSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQASSVGQLRGKDGFATDGGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDAVGGRGAGGSGVTLAGLKRSLSDADSSDGDFGAVSAXXXXXXXXXXXXGEKLRRSDYGLAQXXXXXXXXXXXXXXXXXXSSGGRRSLSPVAGGGDGDGGGSWRGGERGWLEHRGDAGKRRAAEMDMSGRGFASNSSSSRWLEDERDSGDRGGALGYPEDDWLTGGVGGMRSGATGGSGYGGSRSAVRSTADDPRRARXXXXXXXXXXXXXXAAASGLRGDPRVMERSRSSSARGAAFDPRDHDWDGRLGGSPGDGGSDGEYGYAVDERLWAERAVIDERLVAREGSSRMAVARGSXXXXXXXXXXXXXXXXXXARREFSQRDVAQHEFMRAEHGRGPWLERPAAREAFVDDAWDDRHSGGAGAYGAMGMDVERGALDWPEHNGGADGHSXXXXXXXXXXXXXXXXXPPQPKPVYGLRKNGKVRGSKSNPKARGCKAGKNRKNKGAAGWVVINNVG 1848
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Match: A0A836C7D4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7D4_9STRA) HSP 1 Score: 660 bits (1703), Expect = 6.860e-205 Identity = 578/1071 (53.97%), Postives = 623/1071 (58.17%), Query Frame = 1
Query: 1 MSSGRKRPHSALVAVDDDLEEGELPPTEDEAAERAERRKDADLRTPAERLAMIV-------------------------------------------------------------------------VERLLKVKKMDSWTDADYRLKSVQGESAELLEVLGRSTIMDLLFSTTCELEGLMSRLSGGAAVIAAIAQAHKIVCGAAQFVKFGPGLSVRVCAPQLRAIIEALSEELEPD------------VGGLLEADTKVVGKAFTQLDAMLRVLEGWDQRQLEFRSVGKAKSGXXXXXXXXXXXXXXXXXGEEVPQTDLLRRLLNATHQKWKPITRATQVAAPTAXXXXXXXXXXXXXXXXXXPTWPXXXXXXXXXXXXXFMRVMSVPQAQPLHAASALQQTXXXXXXXXXXXXXXXXXXXX----VSGPLAARSLLPGQLAPPPFMQLPMISAAAAAAAQQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKPEPKVEDTKMEPTAELIRMI----EEQRAPL-KYERFALHAPTPQAKQPLVTTAALQPKRESPTMQLPAQPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMQXXXXXXXXXXXXTPHAPAHKD-LLPEPAHSPARSDRGDGD------SAMEVDNDAKANGDGDDAL---SADARENGLEIVDDEGAPPSLXXXXXXXXXXXXXXXXXXXXXXXXXXGPPRFSARVVVAYIDANTKPHELVMAEKRLEELKLGSNELASAXXXXXXXXXXXXXXXXXXXXXAGKDWDISAEQRAAGACGEHRFRYRNASSPGCGLCERAHVPICGACSQCVRCYREGRFGPACRESS-DDSGRWSPPAGAAXXXXXXXXXXXXXXXXXX---------ILRKPKPEIAGDAWRPGRSKKDGGSXXXXXXXXXAGPKLHTLQGRVDRAIYEAFTSDGKEESFAALLSLLRYSGLHNYRRQTGETALHAAAYHGALRAARALLDGGAEAGASDSHGNTPLDLARQRMHADMMAL 2871
M SGRKRPHSAL + DDDLEEGELPPTE+EA+ERAERRKDADLRTPAERLAMIV VERLLK+KKM+SWTD DYRL+SVQGESAELLE+LGRSTIMDLLFSTTCELEGLMSRL+G AAVIAA+AQAH IVCGAAQFVKFG LSV VCAPQLRAIIEALSEELEP E DTKVVG+AFTQLD +LRVLEGWDQRQ EFRSV KS GE V TDLLRRLLNATHQKWKPI R QV PTAXXXXXXXXXXXXXXXXXX XXXXXXXXXXXF++V++VPQAQ XXXXXXXXX XXXXXXX VSGPLAAR LLPGQLAPPPF+QLP +A XXXXXXX KMEP AEL++ EE+ P+ K++ F LHAPTPQ PT +LP + A AH+D LLPEP +S S MEVD DAK D SADARENGLEIVD XXXXXXXXXXXXXXXXX PRF AR+ VA++DA+ P++L AEKRLEELKLG+NELAS+XXXXXXXXXXXXXXXXXX KDW+ISAEQR AGACGEHRFRYRN SSPGC LCERAHVPIC A YREG+FGPACR+++ D+SGRWSPP AA XXXXXX X ILRKPKPEIAGDAWRPG XXXXXXXX K H LQGRVDRAIY AFTSDGKEESFAALL+LLR+S LHNYRRQTGETALHAAAYHGALRAARA+LDGGA GA+DSHGNTPLDLARQRMHADM AL
Sbjct: 1 MVSGRKRPHSALASTDDDLEEGELPPTEEEASERAERRKDADLRTPAERLAMIVCSGLLLMTSRLDDDRHLVVSVDDITCHASAYQENVLTKLLQTDGGPTALLVGLPGGIMLSGRVLGIPIPLLLRVERLLKLKKMESWTDTDYRLRSVQGESAELLEMLGRSTIMDLLFSTTCELEGLMSRLTGAAAVIAAVAQAHTIVCGAAQFVKFGAALSVHVCAPQLRAIIEALSEELEPPGXXXXXXXXXXXXXXXXEEDTKVVGRAFTQLDEVLRVLEGWDQRQAEFRSVVTIKS------------------GETVTLTDLLRRLLNATHQKWKPIIRVMQVVVPTAXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXFIQVINVPQAQXXXXXXXXXXXXXXXXXXXXPAHLXXXXXXXXHIVVSGPLAARQLLPGQLAPPPFVQLPHAAAXXXXXXXXXXXXXXXXG-------------------------------------------------------------------VKMEPKAELVKAXXXXAEEEEQPMPKFKPFVLHAPTPQI----------------PTPELPRAAAA-------------------------------------------------------------AAAHEDHLLPEPVYSXXXXXXXXXXXXXXXXSDMEVDRDAKPADDXXXXXXXXSADARENGLEIVDXXXXXXXXXXXXXXXXXXXXXXXXXARRA-------PRFRARITVAFVDASATPNDLARAEKRLEELKLGANELASSXXXXXXXXXXXXXXXXXXAPA--KDWEISAEQREAGACGEHRFRYRNVSSPGCALCERAHVPICSAXXXXXXXYREGQFGPACRDAALDESGRWSPPTDAASSGXXXXXXAKGKAKADXXXXXGKARGILRKPKPEIAGDAWRPGGGXXXXXXXXXXXXXXG---KQHALQGRVDRAIYAAFTSDGKEESFAALLALLRHSALHNYRRQTGETALHAAAYHGALRAARAMLDGGAAPGAADSHGNTPLDLARQRMHADMPAL 891
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Match: A0A835YL10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL10_9STRA) HSP 1 Score: 644 bits (1662), Expect = 1.630e-199 Identity = 618/1049 (58.91%), Postives = 667/1049 (63.58%), Query Frame = 1
Query: 1 MSSGRKRPHSALVAVDDDLEEGELPPTEDEAAERAERRKDADLRTPAERLAMIV---------------------------------------------------------------------------VERLLKVKKMDSWTDADYRLKSVQGESAELLEVLGRSTIMDLLFSTTCELEGLMSRLSGGAAVIAAIAQAHKIVCGAAQFVKFGPGLSVRVCAPQLRAIIEALSEELEPDVGGLLEADTKVVGKAFTQLDAMLRVLEGWDQRQLEFRSVGKAKSGXXXXXXXXXXXXXXXXXGEEVPQTDLLRRLLNATHQKWKPITRATQVAAPTAXXXXXXXXXXXXXXXXXXP---TWPXXXXXXXXXXXXX--FMRVMSVPQAQPLHAASALQQTXXXXXXXXXXXXXXXXXXXXVSGPLAARSLLPGQLAPPPFMQLPMISAAAAAAAQQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKPEPKVEDTKMEPTAELIRMIEEQRAPLKYERFALHAPTPQAKQPLV--TTAALQPKRESPTMQLPAQPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMQXXXXXXXXXXXXTPHAPAHKDLLPEPAHSPARSDRGDGDSAMEVDNDAKANGDGDDALSADARENGLEIVDDEGAPPSLXXXXXXXXXXXXXXXXXXXXXXXXXXGPPRFSARVVVAYIDANTKPHELVMAEKRLEELKLGSNELASAXXXXXXXXXXXXXXXXXXXXX---AGKDWDISAEQRAAGACGEHRFRYRNASSPGCGLCERAHVPICGACSQCVRCYREGRFGPACRESSDDSGRWSPPAGAAXXXXXXXXXXXXXXXXXX----ILRKPKPEIAGDAWRPGRSKKDGGSXXXXXXXXX------------AGPKLHTLQGRVDRAIYEAFTSDGKEESFAALLSLLRYSGLHNYRRQTGETALHAAAYHGALRAARALLDGGAEAGASDSHGNTPLDLARQ 2844
M+ RKRPHSAL + DDDLEEGELPPTE+EA+ERAERRKD DL+TPAERLAMIV VERLLK+KKMDSWTD D RL+SVQGESAELLE+LGRSTIM+LLF+ TCE+EGLMSRL+GGAAVIA IAQAH IVCGAAQF+KFGPGL VR DTKVVGKAFTQLD MLRVLEGWDQR+ EFR V K KS GE++P T+LLRRLL+ THQKWKP+ R T V PTA XXXXXXXXXXXXXX TWPXXXXXX F++V++VPQAQP AA XXXXXXXXXXXXX VSG AR LLPGQLAPPPF+QLP+ AAA XXXXXXXXXXXXXXXX KPE K AEL++M EE+ P K++ F LHAPTPQ KQ V AALQPK ESP M P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX + DS M V DA + DD SAD+RENGLEIVDDEGAPPSL XXXXXXXXXXXXXXXXX PRF AR V I+AN P ++ +AEKRLEELKLGSNELAS XXXXXXXXXXXXXXXXXXX A KDW+IS QRAAGACGEHRFRYRN ++PGC LCE HV IC ACS+CV CYRE RFGPAC E+ D+SGRWSPP A+ XXXXXXXXXXXXXXXXX ILRKPKPEIAGDAWRPG + GG XXXX PKLHTLQGRVDRAIY AFTSDGKEE FAALL+LLR+SGLHNYRRQTGETALHAAAYHGALRAARA+LDGGA+A ASDSHGNTPLDLARQ
Sbjct: 1 MALRRKRPHSALASTDDDLEEGELPPTEEEASERAERRKDTDLQTPAERLAMIVCSGLLLMTGHLDDDERHLAVAVNAITSHASAYHENVLTKLLQADGGPVALVVGLPGGIKLSNGGVLGIPIPLLQRVERLLKLKKMDSWTDTDSRLRSVQGESAELLELLGRSTIMELLFNITCEVEGLMSRLTGGAAVIATIAQAHIIVCGAAQFLKFGPGLGVR--------------------------EDTKVVGKAFTQLDEMLRVLEGWDQRRREFRCVAKVKS------------------GEDIPLTELLRRLLDDTHQKWKPVIRVTTVVVPTAAPAAXXXXXXXXXXXXXXXXXHTWPXXXXXXLLCPPHLPLFIQVINVPQAQPRQAAXXXXXXXXXXXXXXXXXXXMLPPHIAVSGTFTARQLLPGQLAPPPFLQLPVNPPIHAAATXXXXXXXXXXXXXXXXXXX---------------------------------------------------KPESK---------AELVKMEEEKPMP-KFKPFVLHAPTPQVKQQQVPAAAAALQPKPESPLMAPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGS----------------------DSDMGVKRDANSADFADDDRSADSRENGLEIVDDEGAPPSLAATQSXXXXXXXXXXXXXXXXXRL----PRFRARTTVVLIEANGTPIDVKVAEKRLEELKLGSNELASCAAXXXXXXXXXXXXXXXXXXXXXGADKDWEISVAQRAAGACGEHRFRYRNVTAPGCTLCELTHVRICSACSRCVCCYREERFGPACCETGDESGRWSPPTDASSXXXXXXXXXXXXXXXXXXXXXILRKPKPEIAGDAWRPGGKRDAGGGGGGNDXXXXXXXXXXXXXXPAGAPKLHTLQGRVDRAIYAAFTSDGKEERFAALLALLRHSGLHNYRRQTGETALHAAAYHGALRAARAMLDGGADADASDSHGNTPLDLARQ 918
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Match: A0A835YVE6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE6_9STRA) HSP 1 Score: 536 bits (1380), Expect = 2.780e-159 Identity = 584/1070 (54.58%), Postives = 640/1070 (59.81%), Query Frame = 1
Query: 1 MSSGRKRPHSALVAVDDDLEEGELPPTEDEAAERAERRKDADLRTPAERLAMIV--------------------------------------------------------------------------VERLLKVKKMDSWTDADYRLKSVQGESAELLEVLGRSTIMDLLFSTTCELEGLMSR-------------LSGGAAVIAAIAQAH-------------------KIVCGAAQFVKFGP--GLSVRVCAPQLRAIIEALSEELEPD---------VGGLLEADTKVVGKAFTQLDAMLRVLEGWDQRQLEFRSVGKAKSGXXXXXXXXXXXXXXXXX-----GEEVPQTDLLRRLLNATHQKWKPITRATQVAAPTAXXXXXXXXXXXXXXXXXXP---TWPXXXXXXXXXXXXX-FMRVMSVPQAQPLHAASALQQTXXXXXXXXXXXXXXXXXXXXVSGPLAARSLLPGQLAPPPFMQLPMISAAAAAAAQQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKPEPKVEDTKMEPTAELIRMIEEQRAPLKYERFALHAPTPQAKQP--LVTTAALQPKRESPTMQLPAQPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMQXXXXXXXXXXXXTPHAPAHKDLLPEPAHSPARSDRGDGDSAMEVDNDAKANGDGDDALSADARENGLEIVDDEGAPPSLXXXXXXXXXXXXXXXXXXXXXXXXXXGPPRFSARVVVAYIDANTKPHELVMAEKRLEELKLGSNELASAXXXXXXXXXXXXXXXXXXXXXAGKDWDISAEQRAAGACGEHRFRYRNASSPGCGLCERAHVPICGACSQCVRCYREGRFGPACRESSDDSGRWSPP--AGAAXXXXXXXXXXXXXXXXXXILRKPKPEIAGDAWRPGRSKKDGGSXXXXXXXXX------------AGPKLHTLQGRVDRAIYEAFTSDGKEESFAALLSLLRYSGLHNYRRQTGETALHAAAYHGALRAARALLDG 2784
M+ RKRPHSAL + DDDLEEGELPPTE+EA+ERAERRKDADL+ PAERLAM+V VERLL +KKMDSWT D RL+SVQGESAELLE+LGRSTIM LLFSTTCELE + S + A++ + H + G+ V+ G VRVCAPQLRAIIEALSEELEP GLLE DTKVVGKAFTQLD M+RVLEGWDQR+ EFR V K KSG XXXXXXXX E++ T+LLRRLL+ THQKWKP+ R T V PTA XXXXXXXXXXXXXXXXX WPX F+RV++VPQAQP A XXXXXXXXXXXXXXXX VSG L AR LLPGQLAP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKPE K E K +EE+ LK++ F LHAPTPQ KQ L AALQPK ESP M P+Q XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SP R D D+ MEVD DAK+ D SAD+RENGLEIV+DEGAPPSL XXXXXXXXXXXXXXXXXXXX PRF AR + I+AN P+++V AEKRLEELKLGSNELAS XXXXXXXXXXX KDW+ISAEQRAAGACGEHRFRYRN ++PGC LCE H+ IC A Y E RFGP C + ++ GRWSPP A ++ XXXXXXXXXXXXX ILRKPKPEIAGDAWRPG + GG XXXX PKLH LQGRVDRAIY AFTSDGKEESFAALL+LLR+SGL+NYRRQTGETALHAAAYHGALRAARA+L+G
Sbjct: 1 MALRRKRPHSALASTDDDLEEGELPPTEEEASERAERRKDADLQMPAERLAMLVCSGLLLMTDHLDDDERHLVIAIDAITSHASAYHENVLTKLLQAGGGPMALVVGLPGGIELSGGRLGIPIPLLLRVERLLNLKKMDSWTATDNRLRSVQGESAELLELLGRSTIMGLLFSTTCELEPRLVHHDTPRTASDAHRPRSQDSQCPASVRRPHVAPDRRRRCRRGHRAGAQNPLRRGSVPQVRRGTRRARGVRVCAPQLRAIIEALSEELEPSGSGSSXXXXXXGLLEEDTKVVGKAFTQLDEMVRVLEGWDQRRREFRCVAKVKSGPNFSPCPNXXXXXXXXLPPYTCSEDIALTELLRRLLDDTHQKWKPVIRVTTVVVPTAAXXXXXXXXXXXXXXXXXXXXXAWPXTAPPLLTLPPLPPFIRVINVPQAQPSQAXXXXXXXXXXXXXXXXXXXXXXXPRIAVSGLLTARQLLPGQLAP----------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKPESKAEVVK----------VEEETPMLKFKPFVLHAPTPQVKQQQVLAAAAALQPKLESPFMAPPSQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------SPRRVGSSDSDNDMEVDRDAKSAHFADADRSADSRENGLEIVEDEGAPPSLAAXXXXXXXXXXXXXXXXXXXXRL----PRFRARTTIVLIEANGTPNDVVAAEKRLEELKLGSNELASCAAAXXXXXXXXXXXTD-------KDWEISAEQRAAGACGEHRFRYRNVTAPGCTLCELTHMRICSAXXXXXXXYHEERFGPVCDAACEEGGRWSPPTDASSSAAKXXXXXXXXXXXXXHGILRKPKPEIAGDAWRPGGKRDTGGGGGGNDXXXXXXXXXXXXXXAAGAPKLHMLQGRVDRAIYAAFTSDGKEESFAALLALLRHSGLYNYRRQTGETALHAAAYHGALRAARAMLNG 969
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Match: A0A836CAC6_9STRA (Nsp1-like C-terminal region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC6_9STRA) HSP 1 Score: 440 bits (1132), Expect = 2.790e-143 Identity = 629/632 (99.53%), Postives = 629/632 (99.53%), Query Frame = 3
Query: 75 MSFFGTPAPAASGAAPSTGFSXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAGGSLFGAXXXXXXXGGGXXXXXXXXXXXXXXXXXXGGLYGTASAPSXXXXXXXAAAPXXXXXXXXXXXXXSFGGAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGFXAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAALPAQAAPPVEYRNMTVEEXXXXXXXXXXXXXAIVSKWNEQLEEDASKFKNQAEKISQWDQRLRGNQKDIATLADQVQRLLQTQEDLDSSLSAVKSNQSELDTSLAQLEGENKXXXXXXXXXGEMDXXXXXXXXXXXXXXXXXXXXXGESNXXXXXXXXXXXXXXARELYERHRAQLDNADMNLGTECNAFLIATMQVQGLYERHRAQQLDDADVKEXXXXXXXXXXXXXXXXXERTHRTAQALNEELDAMLGSLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRHAEDKSTMTTVVETLNMHQHMLHRLEVXXXXXXXXXXXXXLESNSQKLDQDLASVGQQLKRVSIG 1970
MSFFGTPAPAASGAAPSTGF XXXXXXXXXXXXXXXXX XXXXXXXXXAPAGGSLFGAXXXXXXXGG XXXXXXXXXXXXXXXXXXGGLYGTASAPSXXXXXXXAAAPXXXXXXXXXXXXXSFGGAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGFXAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAALPAQAAPPVEYRNMTVEEXXXXXXXXXXXXXAIVSKWNEQLEEDASKFKNQAEKISQWDQRLRGNQKDIATLADQVQRLLQTQEDLDSSLSAVKSNQSELDTSLAQLEGENKXXXXXXXXXGEMDXXXXXXXXXXXXXXXXXXXXXGESNXXXXXXXXXXXXXXARELYERHRAQLDNADMNLGTECNAFLIATMQVQGLYERHRAQQLDDADVKEXXXXXXXXXXXXXXXXXERTHRTAQALNEELDAMLGSLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRHAEDKSTMTTVVETLNMHQHMLHRLEVXXXXXXXXXXXXXLESNSQKLDQDLASVGQQLKRVSIG
Sbjct: 1 MSFFGTPAPAASGAAPSTGFXXXXXXXXXXXXXXXXXXSXXXXXXXXXAPAGGSLFGAXXXXXXXGGXXXXXXXXXXXXXXXXXXXGGLYGTASAPSXXXXXXXAAAPXXXXXXXXXXXXXSFGGAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGFXAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAALPAQAAPPVEYRNMTVEEXXXXXXXXXXXXXAIVSKWNEQLEEDASKFKNQAEKISQWDQRLRGNQKDIATLADQVQRLLQTQEDLDSSLSAVKSNQSELDTSLAQLEGENKXXXXXXXXXGEMDXXXXXXXXXXXXXXXXXXXXXGESNXXXXXXXXXXXXXXARELYERHRAQLDNADMNLGTECNAFLIATMQVQGLYERHRAQQLDDADVKEXXXXXXXXXXXXXXXXXERTHRTAQALNEELDAMLGSLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRHAEDKSTMTTVVETLNMHQHMLHRLEVXXXXXXXXXXXXXLESNSQKLDQDLASVGQQLKRVSIG 632
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Match: D7FRT4_ECTSI (Nsp1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT4_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 1.140e-11 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 3
Query: 894 QAAPPVEYRNMTVEEXXXXXXXXXXXXXAIVSKWNEQLEEDASKFKNQAEKISQWDQRLRGNQKDIATLADQVQRLLQTQEDLDSSLSAVKSNQSELDTSLAQLEGE 1214
Q PP +Y NMTVEE IV+ WN +L++DA+ F N+A K+S WD LR Q ++ +LAD VQ+L+ Q+DL S+ A++ QS LD +L QLEG+
Sbjct: 154 QEQPPEQYMNMTVEE--------------IVNSWNVELDQDATTFTNEAVKVSDWDGVLRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSHLDKTLDQLEGQ 246
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Match: A0A485LLL1_9STRA (Aste57867_23017 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLL1_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.170e-8 Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 3
Query: 873 PAAALPA----QAAPPVEYRNMTVEEXXXXXXXXXXXXXAIVSKWNEQLEEDASKFKNQAEKISQWDQRLRGNQKDIATLADQVQRLLQTQEDLDSSLSAVKSNQSELDTSLAQLE 1208
PAA LP Q PP EY + TVE+ I++ W+EQLE A F N+A ++S WD L NQK + LA V+RL Q+DL+++L + S Q+EL+++L QLE
Sbjct: 301 PAATLPPATKEQDKPPAEYMDKTVED--------------IINMWSEQLESHAMAFTNEAVRVSHWDTELMENQKKLGELAIDVRRLQVAQKDLNANLDTITSYQTELESTLEQLE 402
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Match: A0A6H5JT70_9PHAE (Nsp1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT70_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 3.690e-8 Identity = 37/78 (47.44%), Postives = 55/78 (70.51%), Query Frame = 3
Query: 981 IVSKWNEQLEEDASKFKNQAEKISQWDQRLRGNQKDIATLADQVQRLLQTQEDLDSSLSAVKSNQSELDTSLAQLEGE 1214
IV+ WN +L++DA+ F N+A K+S WD LR Q ++ +LAD VQ+L+ Q+DL S+ A++ QS LD +L QLEG+
Sbjct: 325 IVNSWNVELDQDATTFTNEAVKVSDWDVVLRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSHLDKTLDQLEGQ 402
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Match: A0A397BL75_9STRA (Nsp1_C domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BL75_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 6.960e-8 Identity = 41/109 (37.61%), Postives = 63/109 (57.80%), Query Frame = 3
Query: 882 ALPAQAAPPVEYRNMTVEEXXXXXXXXXXXXXAIVSKWNEQLEEDASKFKNQAEKISQWDQRLRGNQKDIATLADQVQRLLQTQEDLDSSLSAVKSNQSELDTSLAQLE 1208
A+ Q PP EY + TVE+ I++ W+EQLE A+ F N+A ++S WD L NQ + LA V+RL Q++L+++L + S Q+EL+++L QLE
Sbjct: 6 AVTLQDKPPAEYMDKTVED--------------IINMWSEQLESHATAFTNEAVRVSHWDTELMQNQTKLGELAIDVRRLQVAQKELNANLDTITSYQTELESTLEQLE 100
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Match: W4GW85_9STRA (Nsp1_C domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GW85_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 5.660e-7 Identity = 41/109 (37.61%), Postives = 63/109 (57.80%), Query Frame = 3
Query: 882 ALPAQAAPPVEYRNMTVEEXXXXXXXXXXXXXAIVSKWNEQLEEDASKFKNQAEKISQWDQRLRGNQKDIATLADQVQRLLQTQEDLDSSLSAVKSNQSELDTSLAQLE 1208
A+ Q PP EY + TVE+ I++ W+EQLE A+ F N+A ++S WD L NQ + LA V+RL Q++L+++L + S Q+EL+++L QLE
Sbjct: 291 AVTLQDKPPAEYMDKTVED--------------IINMWSEQLESHATAFTNEAVRVSHWDTELMQNQTKLGELAIDVRRLQVAQKELNANLDTITSYQTELESTLEQLE 385
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Match: A0A024U9L2_9STRA (Nsp1_C domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9L2_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 9.520e-6 Identity = 38/102 (37.25%), Postives = 59/102 (57.84%), Query Frame = 3
Query: 903 PPVEYRNMTVEEXXXXXXXXXXXXXAIVSKWNEQLEEDASKFKNQAEKISQWDQRLRGNQKDIATLADQVQRLLQTQEDLDSSLSAVKSNQSELDTSLAQLE 1208
PP EY + VE+ I++ W+EQLE A+ F N+A ++S WD L NQ + LA V+RL Q++L+++L + S Q+EL+++L QLE
Sbjct: 319 PPAEYMDKKVED--------------IINMWSEQLESHATTFTNEAVRVSHWDTELMQNQTKLGELAIDVRRLQVAQKELNANLDTITSYQTELESTLEQLE 406 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
BLAST of jgi.p|Trimin1|350440 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10275 ID=mRNA_10275|Name=jgi.p|Trimin1|350440|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5547bp|location=Sequence derived from alignment at Contig_63:164606..176817- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGTCAGGGCGCAAGCGCCCTCACTCCGCACTCGTCGCTGTCGACGAback to top protein sequence of jgi.p|Trimin1|350440 >Trimin1|350440|estExt_Genemark1.C_Ctg_630020 ID=Trimin1|350440|estExt_Genemark1.C_Ctg_630020|Name=jgi.p|Trimin1|350440|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1849bp MSSGRKRPHSALVAVDDDLEEGELPPTEDEAAERAERRKDADLRTPAERLback to top mRNA from alignment at Contig_63:164606..176817- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10275 ID=mRNA_10275|Name=jgi.p|Trimin1|350440|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=12212bp|location=Sequence derived from alignment at Contig_63:164606..176817- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_63:164606..176817- >mRNA_10275 ID=mRNA_10275|Name=jgi.p|Trimin1|350440|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=5547bp|location=Sequence derived from alignment at Contig_63:164606..176817- (Tribonema minus UTEX_B_3156 )back to top |