Trimin1|350435|estExt_Genemark1.C_Ctg_630014 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350435
Unique NameTrimin1|350435|estExt_Genemark1.C_Ctg_630014
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length401
Homology
BLAST of jgi.p|Trimin1|350435 vs. uniprot
Match: A0A836CBB9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB9_9STRA)

HSP 1 Score: 694 bits (1791), Expect = 1.130e-250
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0
Query:    1 MEVVISDSADDGKRANGSGXXXXXXXXXXXXXXXXXXXXXXXXXSAAAARRTASSEKRTAVSSGVKKRAQPAPPVGIRTGKRRMQVSAKQVAKRIKEHPDVLAADAGRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKTRSRLLSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRGALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTRVLVTLLMTTLAVKADDVIQFQIDRWWSEFEVLMQVLTLEQQWEAASRGSAIAAFLQSAAVKLPKNDTVTKSLIPKWRITANQRAITFELVCLQAAAKPFVQATYLLEGDGPLAMITYDLIQGLDSARRDLLPNMLFPAVQQLAANATILCSG 400
            MEVVISDSADDGKRANGSGXXXXXXXXXXXXXXXXXXXXXXXXXSAAAARRTASSEKRTAVSSGVKKRAQPAPPVGIRTGKRRMQVSAKQVAKRIKEHPDVLAADAGRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKTRSRLLSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRGALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTRVLVTLLMTTLAVKADDVIQFQIDRWWSEFEVLMQVLTLEQQWEAASRGSAIAAFLQSAAVKLPKNDTVTKSLIPKWRITANQRAITFELVCLQAAAKPFVQATYLLEGDGPLAMITYDLIQGLDSARRDLLPNMLFPAVQQLAANATILCSG
Sbjct:    1 MEVVISDSADDGKRANGSGXXXXXXXXXXXXXXXXXXXXXXXXXSAAAARRTASSEKRTAVSSGVKKRAQPAPPVGIRTGKRRMQVSAKQVAKRIKEHPDVLAADAGRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKTRSRLLSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRGALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTRVLVTLLMTTLAVKADDVIQFQIDRWWSEFEVLMQVLTLEQQWEAASRGSAIAAFLQSAAVKLPKNDTVTKSLIPKWRITANQRAITFELVCLQAAAKPFVQATYLLEGDGPLAMITYDLIQGLDSARRDLLPNMLFPAVQQLAANATILCSG 400          
BLAST of jgi.p|Trimin1|350435 vs. uniprot
Match: A0A836CA16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA16_9STRA)

HSP 1 Score: 231 bits (588), Expect = 3.200e-65
Identity = 137/320 (42.81%), Postives = 191/320 (59.69%), Query Frame = 0
Query:   73 PPVGIRTGKRRMQVSAKQVAKRIKEHPDVLAADAGRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKTRSRLLSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRGALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTRVLVTLLMTTLAVKADDVIQFQIDRWWSEFEVLMQVLTLEQQWEAASRGSAIAAFLQSAAVKLPKNDTVTKSLIPKWRITANQRAITFELVCLQAAAKPFVQATYLLEGDGPLAMITYDLIQGLDSARRDLLPNMLFPAVQQLAA 392
            PP+G R+GKRR  V+   VA+RIKEHP     + GRL+C +C TE AE+KT+V+RH+  +KHI+       +    K R + L ++F  + AKG+SL+D + ++R++TLRML+IS IP+ KL+GPLR ALE   +SLT+SSHM EL+  V  EEM  L +E+AG+ ++VIFDGTT          LAV A         RWWSEFE+L  +LT+E+  ++ S+GS ++A L++  +                                        QATY LEGDGPL+M+ +D+I+ L S R DLLP+M FPAVQ LAA
Sbjct:   28 PPIGARSGKRRPTVNDSNVARRIKEHPGDFRKEEGRLFCIICVTECAEEKTAVNRHVKSSKHITRKAALEHRAIATKERIKTLRQHFNASQAKGSSLSDMESVYRLETLRMLMISGIPISKLDGPLRLALEHNNYSLTDSSHMRELIIVVAGEEMKALCEELAGQHIAVIFDGTTD-----HAEVLAVVA---------RWWSEFELLANILTVEETSQSDSKGSMLSALLRTEKL----------------------------------------QATYQLEGDGPLSMVAHDVIERLSSIRTDLLPDMDFPAVQMLAA 293          
BLAST of jgi.p|Trimin1|350435 vs. uniprot
Match: A0A6S7JYZ8_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JYZ8_PARCT)

HSP 1 Score: 112 bits (281), Expect = 1.980e-24
Identity = 92/312 (29.49%), Postives = 157/312 (50.32%), Query Frame = 0
Query:   91 VAKRIKEHPDVLAADA----GRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKTRSRLLSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRGALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTRVLVTLLMTTLAVKADDVIQFQIDRWWSEFEVLMQVLTLEQQWEAASRGSAIAAFLQSAAVKLPKNDT-----VTKSLIPKWRITANQRA-ITFELVCLQAAAKPFVQATYLLEGDGPLAMITYDLIQGLDSARRDLLPNMLFPAVQQLAA 392
            VA RI+E P     D     G  +C  C+ E++  ++++  HI   KH+S  EK   K    +  + +L  Y  E +  G +L+   ++FR+  +   + + I ++K+    R  LE   + LT+ ++MA+L+P V +EE     +E+ GR++S++FDGTTR+   L++         +++F +D  W   + L++ L L +    +  G  +A  + S    L + DT      T+ L+    I AN  A +  E+     A +PFV+ TY LEGDGPL +  YD I  L++  R     M  P V Q+++
Sbjct:   37 VAVRIQEFPQECFKDTAIGKGAFFCEACREEISVKRSTIINHINTHKHLSGKEKLHQKAKRERDLAEVLRAYDEENHPIGETLSMNTRVFRLKVVTAFMKAGIAINKINC-FRSILEESAYKLTDRTNMAQLIPVVHQEEKKNTLEELTGREISIVFDGTTRLGEALVI---------IVRF-LDSEWKIQQRLLRFLLLAK----SLAGEEVAREIISV---LAREDTGTAPATTRKLLD---IIANSEAKLKIEIAATVDAGEPFVKKTYSLEGDGPLVLEAYDAIIELENCVR----LMHMPNVTQISS 323          
BLAST of jgi.p|Trimin1|350435 vs. uniprot
Match: A0A2B4RQL6_STYPI (Protein sidekick-2 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RQL6_STYPI)

HSP 1 Score: 104 bits (259), Expect = 2.690e-20
Identity = 93/371 (25.07%), Postives = 156/371 (42.05%), Query Frame = 0
Query:  107 GRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKTRSRLLSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRGALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTRV-------------------LVTLLMTTLAVKADDV---------IQFQID----------------------------------------------------RWWSEFEVLMQVLTLEQQWEAASRGSAIAAFLQSAAVKLPKNDTVTKSLIPKWRITANQRAITFELVCLQAAAKPFVQATYLLEGDGPLAMITYDLIQGLDSARRDL-LPNMLFPAVQQLAANATI 396
            G+ +C  C  ++   KT ++ H+  +KH S  E+   K A  +  ++ L EY  +   KG SL+ A +++ V  +R  + + +PLHK++   R  LE    SLT+S H+++ +  + ++E   +++EI GR +S+IFDGTT V                   L+ LL+ T  +  +++         + F I                                                     RWWS++E+++QV  L     A  +G  I          +  +     SL  ++ IT +             A KPFVQ+TY LEGDG L +  Y +++ L++  R+L  PN    AV +  AN  I
Sbjct: 1731 GQAFCNACCEQIGLKKTLIENHVKSSKHASGKERLEKKEARERDIAKSLKEYDNQFLPKGESLSVALRVYTVKVVRSFMKAGVPLHKIDC-FRELLEEEAFSLTSSRHLSDFIDVIAKDERKKVKEEIEGRDVSIIFDGTTHVAKALNIILRFVTEWKVHQQLIRLLLVTKPMNGEELAHQLLSTLSVDFSIPPSSLLAAARDRASVKNEAKFMKSWVGLFAHSARSRNAFKETTGQFPNSYLETRWWSKYEMMVQVHDLFGDTIAFVKGDQIPEVTARKLQDILNDQQKLASLKVEFAITVD-------------AMKPFVQSTYQLEGDGSLCLQAYQIVRKLEAEMRNLHFPNCC--AVIRNIANGNI 2085          
BLAST of jgi.p|Trimin1|350435 vs. uniprot
Match: A0A6S7HVZ4_PARCT (RNA-directed DNA polymerase from transposon BS n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HVZ4_PARCT)

HSP 1 Score: 85.1 bits (209), Expect = 2.340e-14
Identity = 50/162 (30.86%), Postives = 88/162 (54.32%), Query Frame = 0
Query:   91 VAKRIKEHPDVLAADA----GRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKTRSRLLSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRGALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTR 248
            VA RI+E P     D     G  +C  C+ E++  ++++  HI   KH+S  EK   K    +  + +L  Y  E +  G +L+   ++FR+  +   + + I ++K+    R  LE   + LT+ ++MA+L+P V +EE     +E+ GR++S++FDGTTR
Sbjct:   20 VAVRIQEFPQECFKDTAIGKGAFFCEACREEISVKRSTIINHINTHKHLSGKEKLHQKAKRERDLAEVLRAYDEENHPIGETLSMNTRVFRLKVVTAFMKAGIAINKINC-FRSILEESAYKLTDRTNMAQLIPVVHQEEKKNTLEELTGREISIVFDGTTR 180          
BLAST of jgi.p|Trimin1|350435 vs. uniprot
Match: A0A6S7G7N1_PARCT (RNA-directed DNA polymerase from transposon BS n=6 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7G7N1_PARCT)

HSP 1 Score: 85.1 bits (209), Expect = 3.610e-14
Identity = 50/162 (30.86%), Postives = 88/162 (54.32%), Query Frame = 0
Query:   91 VAKRIKEHPDVLAADA----GRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKTRSRLLSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRGALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTR 248
            VA RI+E P     D     G  +C  C+ E++  ++++  HI   KH+S  EK   K    +  + +L  Y  E +  G +L+   ++FR+  +   + + I ++K+    R  LE   + LT+ ++MA+L+P V +EE     +E+ GR++S++FDGTTR
Sbjct:   37 VAVRIQEFPQECFKDTAIGKGAFFCEACREEISVKRSTIINHINTHKHLSGKEKLHQKAKRERDLAEVLRAYDEENHPIGETLSMNTRVFRLKVVTAFMKAGIAINKINC-FRSILEESAYKLTDRTNMAQLIPVVHQEEKKNTLEELTGREISIVFDGTTR 197          
BLAST of jgi.p|Trimin1|350435 vs. uniprot
Match: A0A1X7T065_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7T065_AMPQE)

HSP 1 Score: 77.8 bits (190), Expect = 7.410e-12
Identity = 48/158 (30.38%), Postives = 85/158 (53.80%), Query Frame = 0
Query:   93 KRIKEHPDV-LAADAGRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKTRSRLLSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRGALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTRV 249
            +R+KE P+  L    G+L+C  C+ EL    T V  H+   KH    EK   +       ++    Y  + +  G +L++  Q++R   ++  L + +PL+K++   R  LE  G  L     +++L+PF+ ++E+  + QEI  R++SVIF+GTTR+
Sbjct:    6 QRVKEFPNENLTVSGGKLFCNGCREELGLKATVVKLHVKSNKHKLGKEKLQGRNKEEIDIAQAFDTYNQKEHLAGETLSNDLQVYRTKVVKTFLKAGVPLNKVD-LFRDILEEHGLQLAGRRVLSDLVPFICKQEVIKISQEIEEREVSVIFNGTTRI 162          
BLAST of jgi.p|Trimin1|350435 vs. uniprot
Match: UPI00138FABF8 (uncharacterized protein LOC116604706 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FABF8)

HSP 1 Score: 66.6 bits (161), Expect = 2.480e-8
Identity = 79/290 (27.24%), Postives = 130/290 (44.83%), Query Frame = 0
Query:   85 QVSAKQVAKRIKEHPDVLAADAGRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKTRSRL---LSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRGALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTRVLVTLLMTTLAVKADDVIQFQIDRWWSEFEVLMQVLTLEQQWEAASRGSAIAAFLQSAAVKLPKNDTVTKSLIPKWRITANQRAITFELVCLQAAAKPFVQATYLLEGDGPLAMITYDLIQGL 371
            +VSAKQ  +  K   D++  +   ++C  CK E+   K S+     +  H+    K+  K  LGK    +   L +Y    + KG +L+ + ++FR+  ++  L S   L+++E   R   E  G SL++SS+M +L+PF+L EE  +    + GR++     G  RV+                ++   RWWS +E    VL   ++W   S  S    F +++  KL               +  N   +  E   L    K FV+ATY LEGDG L  I ++ +  L
Sbjct:   68 KVSAKQRVEEFKGE-DLIVRN-NEVYCAACK-EVVSVKMSI-----MKVHVKELNKEKLKK-LGKREEDIVQALHKYDQAHHPKGQTLSTSTRVFRIKVVQAFLKSGTSLNRVEF-FREIFEEAGMSLSSSSNMRQLIPFILEEEYKSTTS-MKGRRVWKNLTG--RVMP---------------RYNSTRWWSLWECAKVVL---EEWAHVS-ASHDEEFAKASWQKLSD------------ALLHNPVQLRVEFAALMELEK-FVKATYTLEGDGALVFIAFEKLDEL 312          
BLAST of jgi.p|Trimin1|350435 vs. uniprot
Match: A0A7S0LT69_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LT69_9EUKA)

HSP 1 Score: 58.5 bits (140), Expect = 2.160e-6
Identity = 50/173 (28.90%), Postives = 86/173 (49.71%), Query Frame = 0
Query:   80 GKRRMQVSAKQVAKRIKEHP--DVLAADAGRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKTRSRLLSEYFAETNAKGASLTDAQQ--LFRVDTLRMLLISAIPLHKLEGPLRGALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTR 248
            G+R+ + S   +++R++E P    + AD G+L+CR CK  +   K ++  H     H         K+         L E+F   N K    ++     L+R + L   L + +   K++  L G L++   ++T+S +M + +P V   E   L+ EI G+K++VIFDGTTR
Sbjct:   30 GERKTRESLVPLSQRLREFPGQSFIIAD-GKLFCRCCKETIRNHKGTIATHAKGQTHEGKLVAWEKKLGTQNDVKEFLFEHF-RANPKELFASEPMDTLLWRFNVLETFLAAGLEPTKIDD-LAGLLKQ---AVTDSGNMRQFIPKVEGFEFRRLKNEIEGQKVTVIFDGTTR 196          
BLAST of jgi.p|Trimin1|350435 vs. uniprot
Match: A0A6S7KMY7_PARCT (RNA-directed DNA polymerase from transposon BS (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KMY7_PARCT)

HSP 1 Score: 59.3 bits (142), Expect = 6.330e-6
Identity = 32/110 (29.09%), Postives = 63/110 (57.27%), Query Frame = 0
Query:  139 EKDAAKVALGKTRSRLLSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRGALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTR 248
            ++D  +    +  + +L  Y  E +  G +L+   ++FR+  +   + + I ++K+    R  LE   + LT+ ++MA+L+P V +EE     +E+ GR++S++FDGTTR
Sbjct:   23 DEDGEEAKRERDLAEVLRAYDEENHPIGETLSMNTRVFRLKVVTAFMKAGIAINKINC-FRSILEESAYKLTDRTNMAQLIPVVHQEEKKNTLEELTGREISIVFDGTTR 131          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350435 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A836CBB9_9STRA1.130e-250100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CA16_9STRA3.200e-6542.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S7JYZ8_PARCT1.980e-2429.49Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A2B4RQL6_STYPI2.690e-2025.07Protein sidekick-2 n=1 Tax=Stylophora pistillata T... [more]
A0A6S7HVZ4_PARCT2.340e-1430.86RNA-directed DNA polymerase from transposon BS n=1... [more]
A0A6S7G7N1_PARCT3.610e-1430.86RNA-directed DNA polymerase from transposon BS n=6... [more]
A0A1X7T065_AMPQE7.410e-1230.38Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
UPI00138FABF82.480e-827.24uncharacterized protein LOC116604706 n=1 Tax=Nemat... [more]
A0A7S0LT69_9EUKA2.160e-628.90Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A6S7KMY7_PARCT6.330e-629.09RNA-directed DNA polymerase from transposon BS (Fr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_63contigContig_63:124664..127641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350435mRNA_10270Tribonema minus UTEX_B_3156 mRNAContig_63 124395..127641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350435|estExt_Genemark1.C_Ctg_630014 ID=Trimin1|350435|estExt_Genemark1.C_Ctg_630014|Name=jgi.p|Trimin1|350435|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=401bp
MEVVISDSADDGKRANGSGSDGGGSDGGGSDGGGSDGGGSDDSGSAAAAR
RTASSEKRTAVSSGVKKRAQPAPPVGIRTGKRRMQVSAKQVAKRIKEHPD
VLAADAGRLWCRLCKTELAEDKTSVDRHIAITKHISAAEKDAAKVALGKT
RSRLLSEYFAETNAKGASLTDAQQLFRVDTLRMLLISAIPLHKLEGPLRG
ALERGGHSLTNSSHMAELLPFVLREEMATLRQEIAGRKLSVIFDGTTRVL
VTLLMTTLAVKADDVIQFQIDRWWSEFEVLMQVLTLEQQWEAASRGSAIA
AFLQSAAVKLPKNDTVTKSLIPKWRITANQRAITFELVCLQAAAKPFVQA
TYLLEGDGPLAMITYDLIQGLDSARRDLLPNMLFPAVQQLAANATILCSG
*
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