Trimin1|143080|gw1.63.48.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|143080
Unique NameTrimin1|143080|gw1.63.48.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length70
Homology
BLAST of jgi.p|Trimin1|143080 vs. uniprot
Match: A0A836CJ24_9STRA (GIY-YIG domain-containing protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ24_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.900e-46
Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0
Query:    1 YCYALCNEHGRTYVGYTVCPARRIRQHNSAIKGGAKATRGRGPWRFIYVIDCIDYSASDALSLEWHIKHP 70
            YCYALCNE GRTYVGYTVCPARRIRQHNS IKGGAKATRGRGPWRFIYV+DCIDYSASDALSLEWHIKHP
Sbjct:    4 YCYALCNESGRTYVGYTVCPARRIRQHNSDIKGGAKATRGRGPWRFIYVVDCIDYSASDALSLEWHIKHP 73          
BLAST of jgi.p|Trimin1|143080 vs. uniprot
Match: A0A836CN45_9STRA (GIY-YIG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN45_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.560e-39
Identity = 57/70 (81.43%), Postives = 68/70 (97.14%), Query Frame = 0
Query:    1 YCYALCNEHGRTYVGYTVCPARRIRQHNSAIKGGAKATRGRGPWRFIYVIDCIDYSASDALSLEWHIKHP 70
            YCYALCN+ GRTY+GYTVCP+RR+RQHNS+IKGGAKATRGRGPWRFIYV++ I+++AS+ALSLEWHIKHP
Sbjct:    4 YCYALCNDSGRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTASEALSLEWHIKHP 73          
BLAST of jgi.p|Trimin1|143080 vs. uniprot
Match: A0A835ZCR8_9STRA (GIY-YIG domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCR8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 6.200e-25
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    2 CYALCNEHGRTYVGYTVCPARRIRQHNSAIKGGAKATRGRGPWRFIYVIDCIDYSASDALSLEWHIKHP 70
            CY + NE GRTYVGYTV P RR+RQHN  +KGGA+ T G+GPWR++ V+    +    ALS EWH+KHP
Sbjct:    2 CYVIVNEQGRTYVGYTVNPKRRLRQHNGCLKGGARNTAGKGPWRYVIVLTSEAFDNRKALSAEWHLKHP 70          
BLAST of jgi.p|Trimin1|143080 vs. uniprot
Match: A0A836CIF4_9STRA (GIY-YIG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF4_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 8.630e-24
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    1 YCYALCNEHGRTYVGYTVCPARRIRQHNSAIKGGAKATRGRGPWRFIYVIDCIDYSASDALSLEWHIKHP 70
            +CY + NE GRTYVGYTV P RR+RQHN  I GGA++T G+GPWRF +V+    + +   LS EWH+K P
Sbjct:    4 FCYTIVNEQGRTYVGYTVLPKRRLRQHNGVITGGARSTAGKGPWRFAFVLTSESFDSHKGLSCEWHLKRP 73          
BLAST of jgi.p|Trimin1|143080 vs. uniprot
Match: A0A6C0CV58_9ZZZZ (GIY-YIG domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CV58_9ZZZZ)

HSP 1 Score: 82.0 bits (201), Expect = 2.630e-18
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 0
Query:    1 YCYALCNEHGRTYVGYTVCPARRIRQHNSAIKGGAKATRGRGPWRFIYVI-----DCIDYSASDALSLEWHIKHP 70
            YCY + N + RTY GYTV   RR++QHN  I+GGAKATRGRGPW F+ ++     DCI    S A+  EW IK+P
Sbjct:    4 YCYVIGNANDRTYNGYTVNLTRRLKQHNGVIQGGAKATRGRGPWEFVLILTSECWDCI----SVAMQHEWSIKYP 74          
BLAST of jgi.p|Trimin1|143080 vs. uniprot
Match: A0A6C0F1Y7_9ZZZZ (GIY-YIG domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F1Y7_9ZZZZ)

HSP 1 Score: 78.6 bits (192), Expect = 1.120e-16
Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    1 YCYALCNEH------GRTYVGYTVCPARRIRQHNSAIKGGAKATRGRGPWRFIYVIDCIDYSASDALSLEWHIKHP 70
            YCY L          GRTY GYTV    R+RQHN  IKGGA AT+ +GPW FI V+ C+D+++  A+ +EW I++P
Sbjct:   35 YCYILGQTRHVRTGVGRTYNGYTVDLTHRLRQHNGEIKGGAFATKNKGPWEFIAVMTCLDWTSVRAMQVEWLIRYP 110          
BLAST of jgi.p|Trimin1|143080 vs. uniprot
Match: A0A3G4ZPN0_9VIRU (GIY-YIG nuclease n=1 Tax=Terrestrivirus sp. TaxID=2487775 RepID=A0A3G4ZPN0_9VIRU)

HSP 1 Score: 69.7 bits (169), Expect = 1.560e-13
Identity = 37/74 (50.00%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    1 YCYALCNEH----GRTYVGYTVCPARRIRQHNSAIKGGAKATRGRGPWRFIYVIDCIDYSASDALSLEWHIKHP 70
            YCY L + +      TYVG TV P RR+RQHN  + GGAKAT+ R P+    +I     +  DALS EWHIKHP
Sbjct:    4 YCYILRSVNPLYPNNTYVGMTVNPTRRLRQHNGELVGGAKATKTRQPYEMYCIISGFP-TLHDALSYEWHIKHP 76          
BLAST of jgi.p|Trimin1|143080 vs. uniprot
Match: A0A0F2S0S7_9PROT (GIY-YIG domain-containing protein n=1 Tax=Rhodospirillaceae bacterium BRH_c57 TaxID=1629718 RepID=A0A0F2S0S7_9PROT)

HSP 1 Score: 66.2 bits (160), Expect = 9.440e-13
Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 0
Query:    5 LCNEHGRTYVGYTVCPARRIRQHNSAIKGGAKATRGRGPWRFIYVIDCIDYSASDALSLEWHIK 68
            L NE G TYVG T   ARR+RQHN  + GGA+ATRGRG W  +YV D     A+ A S E+++K
Sbjct:    2 LANERGHTYVGITTDVARRVRQHNGEVVGGARATRGRGVWCVVYVEDGFPGRAA-AQSREYYLK 64          
BLAST of jgi.p|Trimin1|143080 vs. uniprot
Match: A0A7S2GS18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GS18_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 4.280e-12
Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 0
Query:   12 TYVGYTVCPARRIRQHNSAIKGGAKATRGRGPWRFIYVIDCIDYSASDALSLEWHIKHP 70
            TY+G+TV PARRIRQHN  I  GAK T    PW  + V+    +S + ALS EWH +HP
Sbjct:    4 TYIGFTVNPARRIRQHNGEISAGAKRTHKCRPWEIVAVVHGFPHSTA-ALSFEWHWQHP 61          
BLAST of jgi.p|Trimin1|143080 vs. uniprot
Match: A0A349LYJ1_9GAMM (GIY-YIG domain-containing protein n=1 Tax=Rheinheimera sp. TaxID=1869214 RepID=A0A349LYJ1_9GAMM)

HSP 1 Score: 65.1 bits (157), Expect = 4.770e-12
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 0
Query:    1 YCYALCNEHGRTYVGYTVCPARRIRQHNSAIKGGAKATRGRGPWRFIYVIDCIDYSASDALSLEWHIK 68
            Y Y L N+ G  Y G +  PARR+RQHN  ++GGAKA RG+GP+  ++ I C D S   AL LE+ +K
Sbjct:    5 YLYLLQNQPGLLYAGISTDPARRLRQHNGELQGGAKALRGKGPFVVLHQIACADKSM--ALRLEYQLK 70          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|143080 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJ24_9STRA2.900e-4695.71GIY-YIG domain-containing protein (Fragment) n=2 T... [more]
A0A836CN45_9STRA2.560e-3981.43GIY-YIG domain-containing protein n=1 Tax=Tribonem... [more]
A0A835ZCR8_9STRA6.200e-2557.97GIY-YIG domain-containing protein (Fragment) n=1 T... [more]
A0A836CIF4_9STRA8.630e-2455.71GIY-YIG domain-containing protein n=1 Tax=Tribonem... [more]
A0A6C0CV58_9ZZZZ2.630e-1853.33GIY-YIG domain-containing protein n=1 Tax=viral me... [more]
A0A6C0F1Y7_9ZZZZ1.120e-1648.68GIY-YIG domain-containing protein n=1 Tax=viral me... [more]
A0A3G4ZPN0_9VIRU1.560e-1350.00GIY-YIG nuclease n=1 Tax=Terrestrivirus sp. TaxID=... [more]
A0A0F2S0S7_9PROT9.440e-1353.13GIY-YIG domain-containing protein n=1 Tax=Rhodospi... [more]
A0A7S2GS18_9STRA4.280e-1252.54Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A349LYJ1_9GAMM4.770e-1248.53GIY-YIG domain-containing protein n=1 Tax=Rheinhei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035901GIY-YIG endonuclease superfamilyGENE3D3.40.1440.10coord: 1..70
e-value: 3.2E-20
score: 73.9
IPR035901GIY-YIG endonuclease superfamilySUPERFAMILY82771GIY-YIG endonucleasecoord: 1..69
IPR000305GIY-YIG endonucleasePFAMPF01541GIY-YIGcoord: 1..68
e-value: 9.9E-14
score: 51.4
IPR000305GIY-YIG endonucleasePROSITEPS50164GIY_YIGcoord: 1..70
score: 18.199015
NoneNo IPR availablePANTHERPTHR20208STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1coord: 2..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_63contigContig_63:24267..24476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|143080mRNA_10255Tribonema minus UTEX_B_3156 mRNAContig_63 24267..24476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|143080|gw1.63.48.1 ID=Trimin1|143080|gw1.63.48.1|Name=jgi.p|Trimin1|143080|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=70bp
YCYALCNEHGRTYVGYTVCPARRIRQHNSAIKGGAKATRGRGPWRFIYVI
DCIDYSASDALSLEWHIKHP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035901GIY-YIG_endonuc_sf
IPR000305GIY-YIG_endonuc