mRNA_6556 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350432
Unique NamemRNA_6556
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Match: A0A836CBJ0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBJ0_9STRA)

HSP 1 Score: 1443 bits (3735), Expect = 0.000e+0
Identity = 801/801 (100.00%), Postives = 801/801 (100.00%), Query Frame = 1
Query:    1 MNSVAAFSSLVRARRRHPPGDASQADGESSASPGLSTAAQSRQQEQPETPGDDVPGRRTVLWRGDRYGRAVGIASMCIASFLLESSLGPQNMPCLRPTLIEVADVAGEIGEALPYVDHVAKLLKAIAKVVQDNIEVMTACDETTCNLERLKITLNKRTDPRFKLQQDAQLVVDIMKQLDAEVRGRNTKGRVRKLISAGRLITTITDLNKKIDSAIGKLDLAVDVTTVEVAVETREIVGTALLREDPGPLRVEGQYGHRSLLPKEELSFSSGGPPRVIVIYGTGGMGKSTLARALYEERRLLPCFQSKHDAASVSVGADDGVKYVRKELLLQLSDNAMPPDVHKPEALLGALQTPKLLLLDNIWTQEQLTDVRGAKLVDGSLIIVTTRIGSFADGWHAGTVVTSLPMPGLEDADALALFREMSALSQPTPANLRQLEDEIVRSCAGMPLALAVAGGALLNTSAIGDWEAIQMALRSGETIGDDARMDQLLDLSLKGLKDYVKDMFLDACTVMYGRDPQHALCAWQAMHVGRDLRTSLKQLRDRSLLEIRKTEFEDLKYLWVHDVLKAVGGDMARETRVWQATQKAKIGVTAMRLTHKKQIDVAQHDDMRDLQVLLMDDLAGDSPDPVFSAASTQLKWLSLQHCATDHVADVAKFKSLGVLDLSRCSGITSLPDALGDLEELKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMQYCFGKVRSDRGARVLVVGHARGALLGVAVARHLGAPLVRWVDGTGVFGHHPAVRVEDRSGSIEPPVD 2403
            MNSVAAFSSLVRARRRHPPGDASQADGESSASPGLSTAAQSRQQEQPETPGDDVPGRRTVLWRGDRYGRAVGIASMCIASFLLESSLGPQNMPCLRPTLIEVADVAGEIGEALPYVDHVAKLLKAIAKVVQDNIEVMTACDETTCNLERLKITLNKRTDPRFKLQQDAQLVVDIMKQLDAEVRGRNTKGRVRKLISAGRLITTITDLNKKIDSAIGKLDLAVDVTTVEVAVETREIVGTALLREDPGPLRVEGQYGHRSLLPKEELSFSSGGPPRVIVIYGTGGMGKSTLARALYEERRLLPCFQSKHDAASVSVGADDGVKYVRKELLLQLSDNAMPPDVHKPEALLGALQTPKLLLLDNIWTQEQLTDVRGAKLVDGSLIIVTTRIGSFADGWHAGTVVTSLPMPGLEDADALALFREMSALSQPTPANLRQLEDEIVRSCAGMPLALAVAGGALLNTSAIGDWEAIQMALRSGETIGDDARMDQLLDLSLKGLKDYVKDMFLDACTVMYGRDPQHALCAWQAMHVGRDLRTSLKQLRDRSLLEIRKTEFEDLKYLWVHDVLKAVGGDMARETRVWQATQKAKIGVTAMRLTHKKQIDVAQHDDMRDLQVLLMDDLAGDSPDPVFSAASTQLKWLSLQHCATDHVADVAKFKSLGVLDLSRCSGITSLPDALGDLEELKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMQYCFGKVRSDRGARVLVVGHARGALLGVAVARHLGAPLVRWVDGTGVFGHHPAVRVEDRSGSIEPPVD
Sbjct:    1 MNSVAAFSSLVRARRRHPPGDASQADGESSASPGLSTAAQSRQQEQPETPGDDVPGRRTVLWRGDRYGRAVGIASMCIASFLLESSLGPQNMPCLRPTLIEVADVAGEIGEALPYVDHVAKLLKAIAKVVQDNIEVMTACDETTCNLERLKITLNKRTDPRFKLQQDAQLVVDIMKQLDAEVRGRNTKGRVRKLISAGRLITTITDLNKKIDSAIGKLDLAVDVTTVEVAVETREIVGTALLREDPGPLRVEGQYGHRSLLPKEELSFSSGGPPRVIVIYGTGGMGKSTLARALYEERRLLPCFQSKHDAASVSVGADDGVKYVRKELLLQLSDNAMPPDVHKPEALLGALQTPKLLLLDNIWTQEQLTDVRGAKLVDGSLIIVTTRIGSFADGWHAGTVVTSLPMPGLEDADALALFREMSALSQPTPANLRQLEDEIVRSCAGMPLALAVAGGALLNTSAIGDWEAIQMALRSGETIGDDARMDQLLDLSLKGLKDYVKDMFLDACTVMYGRDPQHALCAWQAMHVGRDLRTSLKQLRDRSLLEIRKTEFEDLKYLWVHDVLKAVGGDMARETRVWQATQKAKIGVTAMRLTHKKQIDVAQHDDMRDLQVLLMDDLAGDSPDPVFSAASTQLKWLSLQHCATDHVADVAKFKSLGVLDLSRCSGITSLPDALGDLEELKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMQYCFGKVRSDRGARVLVVGHARGALLGVAVARHLGAPLVRWVDGTGVFGHHPAVRVEDRSGSIEPPVD 801          
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Match: A0A836CFU9_9STRA (NB-ARC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFU9_9STRA)

HSP 1 Score: 376 bits (966), Expect = 2.620e-115
Identity = 251/546 (45.97%), Postives = 326/546 (59.71%), Query Frame = 1
Query:  385 VVQDNIEVMTACDETTCNLERLKITLNKRTDPRFKLQQDAQLVVDIMKQLDAEVRGRNTKGRVRKLISAGRLITTITDLNKKIDSAIGKLDLAVDVTTVEVAVETREIVGTALLREDPGPLRVEGQYGHRSLLPKEELSFSSGGPPRVIVIYGTGGMGKSTLARALYEERRLLPCFQSKHDAASVSVGADDGVKYVRKELLLQLSDNAMPPDVHKPEALLGALQTPKLLLLDNIWTQEQLTDVRGAKLVDGSLIIVTTRIGSFADGWHAGTVVTSLPMPGLEDADALALFREMSALSQPTPANLRQLEDEIVRSCAGMPLALAVAGGALLNTSAIGDWEAIQMALRSGETI-GD-DARMDQLLDLSLKGLKDYVKDMFLDACTVMYGRDPQHALCAWQAMHVGRDLRTSLKQLRDRSLLEIRKTEFEDLKYLWVHDVLKAVGGDMARE-TRVWQATQKAKIGVTAMRLTHKKQIDVAQHDDMRDLQVLLMDDLAGDSP-DPVFSAASTQLKWLSLQHCATDHVADVAKFKSLGVLDLSRCSGITSL 2010
            +V+DN +V TAC       ERLK TL++  +    L++  + V  ++ +L   +   + +G + + ISAG   +TI+DLN KIDSAI +L LAV   T++ A     ++ +A++R D  PL VEG +GH+SLL  EEL FS G   +V++I+G G                                 AD  V YV++ELL QLSD A+P        L   L TPKLLLLDNIWT  QL  +RG KLV GS +IVTTR     D WH   V    PMP LE  DALALFR  + L +P P +L++LE EIV  C GMPLALAVAGG L + +A+ DW+ +  ALRSG+ + GD D RM  LL LSLKGL+   K+MFLDACTVMYGR+P  A CAWQAM+  R L  S+ +L++RSLLEI K E    ++LWVHDVLKA+GG  A E TRVW+  Q+AK  V A+ L  + Q++  Q    RDLQVLLMD+L      D +   + TQLKWLSL   +T  + D A+FK L VLD S C+ +  L
Sbjct:    1 MVKDNQDVKTACLSCKEKCERLKGTLDELLELEPNLREHVEAVFSVLHRLAQSLLENDGRGSIVRFISAGATKSTISDLNGKIDSAIVELALAVGEATLKSA----HMIESAVIRPDREPLNVEGTFGHQSLLSSEELQFSPGEKAQVVMIHGRG---------------------------------ADKDVIYVQQELLKQLSDCAVPAHTAMAGELQKQLGTPKLLLLDNIWTAAQLGGLRG-KLVGGSFVIVTTRNTHVLD-WHTADV-KEFPMPELEHDDALALFRSSAGLEEPPPTSLQKLELEIVGLCGGMPLALAVAGGGLRHKTAMDDWKEVAAALRSGQGVAGDGDGRMRALLKLSLKGLEACEKEMFLDACTVMYGRNPDDARCAWQAMYSDRALAGSVIKLKNRSLLEIHKDERTGREHLWVHDVLKAIGGARAVEGTRVWKPEQEAKPNVRAIVLHEQAQLNDEQGG-ARDLQVLLMDELRSTVDLDHILRISGTQLKWLSLPP-STGTLPDFARFKGLVVLDCSMCNELADL 504          
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Match: A0A835ZFV0_9STRA (NB-ARC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFV0_9STRA)

HSP 1 Score: 285 bits (730), Expect = 1.370e-82
Identity = 191/410 (46.59%), Postives = 232/410 (56.59%), Query Frame = 1
Query:  853 MGKSTLARALYEERRLLPCFQSKHDAASVSVGADDGVKYVRKELLLQLSDNAMPPDVHKPEALLGALQTPKLLLLDNIWTQEQLTDVRGAKLVDGSLIIVTTRIGSFADGWHAGTVVTSLPMPGLEDADALALFREMSALSQPTPANLRQLEDEIVRSCAGMPLALAVAGGALLNTSAIGDWEAIQMALRSGETI-GD-DARMDQLLDLSLKGLKDYVKDMFLDACTVMYGRDPQHALCAWQAMHVGRDLRTSLKQLRDRSLLEIRKTEFEDLKYLWVHDVLKAVGGDMARETRVWQATQKAKIGVTAMRLTHKKQIDVAQHDDMRDLQVLLMD---DLAGDSPDPVFSAASTQLKWLSLQHCATDHVADVAKFKSLGVLDLSR---------CSGITSLPDALGDLEEL 2040
            MGKSTLARALY + RLLP F+ KH AA VS GA+  V YV++ELL QL+D   P        L   L+TPKLLLLD+IWT  QL  +RG ++V GS +IVTTR     D WH   V   L MPGLE  DA++LFR  + L +P   +L++LE EIV  C GMPLALAVAGG L + +A+ DW+ I+ AL SG  I GD D RM  LL+LSL GL+ Y K+MFLDACTVMYGR+P  ALCAW AMH GR+L  SL  LR+RSLLEI K              LK   G                                      +D+QVLLM    D+     D +F  A TQLKWLSL      H+ D+A FK L +LD S          C  ++SLP +LG+L  L
Sbjct:    1 MGKSTLARALYNKLRLLPQFEPKHSAAVVSAGAEKDVMYVQEELLKQLNDGEAPAHAAMAGELHKRLRTPKLLLLDDIWTAAQLIGLRG-EVVSGSFVIVTTRNTHVLD-WHTANVKAFL-MPGLEGYDAVSLFRFSAGLEEPPSPSLQELEQEIVNLCGGMPLALAVAGGGLRHKTAVNDWKVIKTALLSGLRITGDGDGRMRALLELSLSGLEFYEKEMFLDACTVMYGRNPDDALCAWGAMHGGRELSGSLDVLRNRSLLEIHK--------------LKEGRG-------------------------------------AKDVQVLLMGGLCDMVKVDLDAIFRMAGTQLKWLSLPSFTGPHLPDLAHFKELVILDCSSKMKTLRLRDCWRLSSLPKSLGNLTAL 356          
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Match: A0A836CD20_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD20_9STRA)

HSP 1 Score: 119 bits (297), Expect = 5.630e-25
Identity = 103/331 (31.12%), Postives = 147/331 (44.41%), Query Frame = 1
Query:  766 GHRSLLPKEELSFSSGGPP-RVIVIYGTGGMGKSTLARALYEERRLLPCFQSKHDAASVSVGADDGVKYVRKELL--LQLSDNAMPPDVHKPEALLGALQTPKLLLLDNIWTQEQLTDVRGAKLVDGSLIIVTTRIGSFADGWHA--GTVVTSLPMPGLEDADALALFRE-MSALSQPTPANLRQLEDEIVRSCAGMPLALAVAGGALLNTSAIGDWEAIQMALRSGETIGDDARMDQLLDLSLKGLKD-----YVKDMFLDACTVMYGRDPQHALCAWQ---AMHVGRDLRTSLKQLRDRSLLEIRKTEFEDLKYLWVHDVLKAVGGDMA 1716
            GH  LL ++EL   S     +V+VI+G GGMGKS LARAL+   +LL  F +   AA V    D     +R  LL  L+L +     D  +        Q    LL+DN+WT++QL+D+   +LV GS++++TTR      G  A     V    MPGL + +A++LFR  + A   P P  L  L+   V                                        DD R+D +L  SL  L       Y K MF++A T M+G +  +A   WQ   A H     R  L QL +RSL+ +     +    LWVHD ++ +   +A
Sbjct:  123 GHSELLSRQELQLQSTNEAVQVLVIHGAGGMGKSALARALFN--KLLERFSAHQTAAHVQSDVDTAAAALRTHLLKCLRLWNAKDTADDERDRVRQWLTQGQAKLLVDNLWTRQQLSDLLVERLVAGSVVVITTRNRGVTQGLSAQHDAQVRLFAMPGLGEKNAVSLFRRCLKATEPPFPDVLDDLKHGHV----------------------------------------DDDRLDNVLTASLDSLASNGKLQYRKLMFIEAATTMHGCNADNACIVWQDQHARHGANAARCGLTQLLERSLVRV-----DSNGNLWVHDFIRGLAAAIA 406          
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Match: A0A2G2X548_CAPBA (NB-ARC domain-containing protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2X548_CAPBA)

HSP 1 Score: 102 bits (253), Expect = 9.290e-20
Identity = 94/319 (29.47%), Postives = 155/319 (48.59%), Query Frame = 1
Query:  790 EELSFSSGGPPRVIVIYGTGGMGKSTLARALYEERRLLPCFQSKHDAASVSVGADDGVKYVRKELLLQLSDNAMPPD--VHK------PEALLGALQTPK-LLLLDNIWTQEQLTDVRGAKLVD---GSLIIVTTRIGSFADGWHAGTVVTSLPMPGLEDADALALFREMSALSQPTPANLRQLEDEIVRSCAGMPLALAVAGGALLNTSAIGDWEAIQMALRSGETIGDDARMDQLLDLSLKGLKDYVKDMFLDACTVMYGRDPQ-------HALCAWQA---MHVGRDLRTS----LKQLRDRSLLEIRKTEFEDLK 1668
            E+L+ S  G P++I I G GG+GK+TLA+ +Y  + +L CF  +   A+VS       K+ RKE+LL L  + +  D  V K       + L  +L+  + L++LD+IW+ E    +R     +   GS I++TTR    A   +AGT   S+ M  +   ++ +LF+  ++  +  P  L  +  +IV  C G+PL + V  G L +  AI DWE++   ++S  T   D R   +L LS   L   +K      C + +G  P+         + +W A   + +  DL       L++L DR L+ + K   +  K
Sbjct:   13 EDLTISYSGEPKIIPIVGMGGIGKTTLAKEVYNNKSVLRCFDVR-SWATVSP------KHNRKEILLGLLQSTIIMDDMVRKIGEAELADMLQKSLKRKRYLIVLDDIWSCEVWDGLRRCFPTEDNAGSRILLTTRDNEVAH--YAGTENLSVQMDLMSPDESWSLFKSEASSGEALPYGLEDVGKQIVDECHGLPLTIIVVAGLLKSKRAIEDWESVAKDVKSFVTNDPDERCSHVLGLSYNHLTSDLK-----TCLLHFGIFPEDNEIPAKRLVRSWMAEEFLKLENDLEGEAEKCLQELVDRCLVLVCKKSLDGTK 317          
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Match: A0A2K3PES9_TRIPR (Disease resistance protein (TIR-NBS-LRR class) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PES9_TRIPR)

HSP 1 Score: 104 bits (259), Expect = 3.720e-19
Identity = 125/471 (26.54%), Postives = 219/471 (46.50%), Query Frame = 1
Query:  700 REIVGTALLREDPGPLRVEG-QYGHRSLLPKEELSFSSGGPPR--VIVIYGTGGMGKSTLARALYEERRLLPCFQSKHDAASVSVGAD---DGVKYVRKELLLQLSDNAMPPDVHKPEALLGALQTPKLL----------LLDNIWTQEQLTDVRGAKLV--DGSLIIVTTRIGSFADGWHAGTVVTSLPMPGLEDADALALFREMSALSQPTPA-NLRQLEDEIVRSCAGMPLALAVAGGALLNTSAIGDWEAIQMALRSGETIGDDARMDQLLDLSLKGLKDYV-KDMFLDACTVMYGRDPQHALCAWQAMHVGRDLRTSLKQLRDRSLLEIRKTEFEDLKYLWVHDVLKAVGGDMARET---------RVW------------QATQKAKIGVTAMRLTHKKQIDVAQHDDMRDLQVLLMD--DLAGDSPDPVFSAASTQLKWLSLQHCATDHVADVAKFKSLGVLDL 1983
            ++IV   L + D   LR+     G  S + +E + F+S  P +  +I I+G GG GK+T+A+A+Y +  +   F ++    +V    +    G+ +++++L+  + +        K   L+  L T K+L          +LD++ T EQL  + G       GSLIIVTTR            V T   M  +++ ++L LF    A   P+P  +  +    +V  C G+PLAL V G  L   +   +W+++ + L   E I +D ++ ++L +S  GLKD + KD+FLD C    G+D  +         +  D+   +  L DRSLL++ K        L VHD+++ +G ++ RE+         R+W              T+  +  V  ++ T +     +   +M++L++L +D  DL GD     +   S +L+WL  Q    + + D     +L V+DL
Sbjct:  172 QQIVEDVLAKLDSAILRITNFPVGLESRV-QEVIDFTSTHPSKACMIGIWGMGGSGKTTIAKAIYNQ--IHRNFANRSFIENVRENCEMKNRGIIHLQQQLVSDIINR-------KDYILVTVLATSKILKRFRGKKVLVVLDDVTTFEQLQALYGNPKFFGPGSLIIVTTRDARLLKLARVDYVCT---MKEMDEKESLQLF-SWHAFRHPSPIEDFGEFSRNVVTYCGGLPLALEVIGSYLYERTEE-EWKSVLLKL---ERIPND-QVQEILRISYDGLKDNMEKDIFLDICCFFIGKDRAYVTKILNGCGLYADI--GIAVLIDRSLLKVEKNN-----KLGVHDLIRDMGREIVRESSEKRPGKRSRLWFHQDVHDVLTKNSGTENVEGLVLKLQRTSRVCFSASSFKEMKNLRLLQLDCVDLTGD-----YGCLSKELRWLHWQQTTFNSIPDDFYMGNLIVIDL 611          
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Match: UPI002016CB5E (disease resistance protein L6-like n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=UPI002016CB5E)

HSP 1 Score: 103 bits (256), Expect = 6.740e-19
Identity = 114/455 (25.05%), Postives = 205/455 (45.05%), Query Frame = 1
Query:  823 RVIVIYGTGGMGKSTLARALYEERRLLPCFQSKHD---AASVSVGADDGVKYVRKELLLQLSDNAMPPDVHKPEALLG----ALQTPKLLL-LDNIWTQEQLTDVRGA-KLVDGSLIIVTTRIGSFADGWHAGTVVTSLPMPGLEDADALALFREMSALSQPTPANLRQLEDEIVRSCAGMPLALAVAGGALLNTSAIGDWEAIQMALRSGETIGDDARMDQLLDLSLKGLKDYVKDMFLDACTVMYGRDPQHALCAWQAMHVGRDLRTSLKQLRDRSLLEIRKTEFEDLKYLWVHDVLKAVGGDMARE---------TRVWQATQKAKIGVTAMRLTHKKQIDVAQHDD-----------MRDLQVLLMDD--LAGDSPDPVFSAASTQLKWLS---------LQHCATDHVA----------------DVAKF-KSLGVLDLSRCSGITSLPD 2016
            R+I IYG GG+GK+T+A+ ++ E  L  CF ++         S+  +DG+  ++K LL  ++ +     V   E  +     AL+T K+L+ LD++  ++ +  + G   L  GS +I+TTR  +          +    MP ++   AL LF   ++       +  QL  EIV S  G+PL++ V G +L        WE   + ++         R+ + L  S   L +  K +FLD     + +   +A+  W +  +  +  + ++ L +RSL++I     +D K+ W+HD L A+G ++ RE         +R+W A +   I  T  +    K +D+   DD           +R+L+ L + +    GD     F+   + L+W+S          ++   DH+                 D+ K  ++L V+ L+ C GIT++PD
Sbjct:  215 RLIAIYGMGGIGKTTMAKVIFNE--LYSCFGNRCSFLKEVRESLSTEDGIVRLQKRLLSNIAGSRFAQQVENSEQGMKKIGEALRTEKVLVVLDDVAEEQHIESLIGNYSLCSGSRVIITTRDKTIPPNERFNGEIRRYEMPEMDAPVALQLFSWHASDRDSPLDDYHQLSSEIVSSMGGLPLSIEVIGSSLKRRGKP-VWEETLLNIKKVPK----KRILKKLKYSYDDLDENEKQIFLDIACFFHNKKKTNAIYMWTSCEL--NPLSGVEILTERSLIKI----LDDDKF-WMHDELIALGREIVREDSKYDLGKQSRLWIAEEALDILKTEEKKDKVKALDIDGLDDSIEITNQEFERLRNLRFLKLCNGTYVGD-----FAKCRSNLRWISWRCPRQRFRAKNLHLDHLVVFELGANGFTDDSKAWDLMKMGQNLRVISLTECDGITTIPD 650          
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Match: A0A6P5NJ54_ARADU (ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase n=3 Tax=Arachis duranensis TaxID=130453 RepID=A0A6P5NJ54_ARADU)

HSP 1 Score: 102 bits (254), Expect = 1.690e-18
Identity = 115/410 (28.05%), Postives = 189/410 (46.10%), Query Frame = 1
Query:  823 RVIVIYGTGGMGKSTLARALYEERRL---LPCFQSKHDAASVSVGADD-GVKYVRKELL--LQLSDNAMPPDVHKPEALLGALQTPKLLLL-DNIWTQEQLTDVRGAK--LVDGSLIIVTTRIGSFADGWHAGTVVTSLPMPGLEDADALALFREMSALSQPTPANLRQLEDEIVRSCAGMPLALAVAGGALLNTSAIGDW-EAIQMALRSGETIGDDARMDQLLDLSLKGLKDYVKDMFLDACTVMYGRDPQHALCAWQAMHVGRDLRTSLKQLRDRSLLEIRKTEFEDLKYLWVHDVLKAVG---------GDMARETRVW-------QATQKAKIGVTAMRLTHKK--QIDVAQHD----DMRDLQVLLMDDLAGDSPDPVFSAASTQLKWLSLQHCA------TDH 1938
            R I I+G GGMGK+T+ARA++E  R    + CF      A V    +   + +++K+LL  + +S NA+         +  +L   K+LL+ D++  ++QL D+ G +     GS II+TTR      G     V  +  + GL +++AL LF   +   Q        L +E+V+   G+PLAL V G  L     I  W  AI+   +S  +      +  +L +S +GL+D  KD+FLD      G +  H     +    G D    +  L +RSL+ I K +++   +L +HD+L+ +G          D+ + +R+W         TQK K   T   + HKK  + +V + D     M  L++L++D +      P+       LK    ++C       TDH
Sbjct:  213 RFIGIWGMGGMGKTTIARAVFETIRCRFEVTCF-----LADVRENCEKKDITHLQKQLLDQMNISSNAVHNKYDGRTVIQNSLHLKKVLLVVDDVNHEKQLEDLAGERDWFGPGSRIIITTRDVEVLKGPE---VHETYKVEGLVESEALNLFCLKAFKQQEPTEGFLDLSEEVVKYSGGLPLALKVLGPYLNGRPTIAVWYSAIERIKKSSHS-----EIIDVLKISYEGLEDTEKDIFLDIACFFKGWEKHHVTEILK--RCGHDAEIGIDILINRSLITIDKYDYD--YWLGMHDLLEEMGKRIVIQESQNDVCKRSRLWCLEDVEFVLTQKKKTKATHGIVLHKKYSETEVNRRDLSFSKMCQLKLLILDGVKA----PILCDIPCTLKVFRWRYCPLKTLPLTDH 601          
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Match: U5CPS8_AMBTC (TIR domain-containing protein n=3 Tax=Amborella trichopoda TaxID=13333 RepID=U5CPS8_AMBTC)

HSP 1 Score: 102 bits (253), Expect = 1.960e-18
Identity = 112/434 (25.81%), Postives = 198/434 (45.62%), Query Frame = 1
Query:  823 RVIVIYGTGGMGKSTLARALYEERRLLPCFQSKHDAASV--SVGADDGVKYVRKELLLQLSDNAMPP------DVHKPEALLGALQTPKLLLLDNIWTQEQLTDVRGAK--LVDGSLIIVTTR------IGSFADGWHAGTVVTSLPMPGLEDADALALFREMSALSQPTPANLRQLEDEIVRSCAGMPLALAVAGGALLNTSAIGDWEAIQMALRSGETIGDDARMDQLLDLSLKGLKDYVKDMFLDACTVMYGRDPQHALCAWQAMHVGRDLRTSLKQLRDRSLLEIR-KTEFEDLKYLWVHDVLKAVG---------GDMARETRVWQATQ-----KAKIGVTAMRLTHKKQIDVAQH---DDMRDLQVLLMDDLAGDSPDPVFSAASTQLKWLSLQHCATDHVADVAKFKSLGVLDLSRCSGITSLPDAL 2022
            R+I I+G GG+GK+TLA+A++   ++   F+ +   ++V  S   +DGV  ++K+LL +L +  +P        ++  +A +G+ +   L+++D++  ++QL  + G       GS II+TTR      +    D  H         +  L+D  +L LF   +           QL  ++     G+PLAL V G  L + ++I +WE    A+   + I +D  M +L  +S   L    K +FLD      G D  +A+  W+          S+++L  R+L++I  K E      LW+HD L+ +G          D  R +R+W         K  +G   +R    K  ++ +    +  + +  L +  ++G S    F + S +L WL LQ C   ++     ++ L VLDLS    I  + D +
Sbjct:  194 RMIAIHGMGGIGKTTLAKAVFN--KICSSFEGRCFLSNVRESSKTNDGVVSLQKQLLQELFNEGVPNIYSVDRGINVIKARIGSKKV--LVVIDDVDNEDQLEKLAGNCDWYSQGSRIIITTRDEHVLNVHKRVDSHHI------YELKVLDDTQSLELFSWCAFKRNQPMQEYVQLSKDVTSIAGGLPLALEVLGYYLCDLTSIEEWED---AITELKRIPEDKVMLKLR-ISFDDLSRETKQIFLDIACFFIGDDKDYAIDIWKGCRF--PAAGSIRKLLQRALIKINNKNE------LWMHDQLRDMGRRIVELENLDDPGRRSRLWSEEDVTTVLKYHMGTLEVRGLMLKGNELERSWELETFKPMTNLKLLSISGVSLIGSFKSISPKLVWLKLQGCPLHYLLGDLSYEELAVLDLSNNDCILEISDII 605          
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Match: UPI0020174FD0 (disease resistance protein L6-like n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=UPI0020174FD0)

HSP 1 Score: 101 bits (252), Expect = 2.850e-18
Identity = 109/409 (26.65%), Postives = 179/409 (43.77%), Query Frame = 1
Query:  823 RVIVIYGTGGMGKSTLARALYEERRLLPCFQSKHDAASVSVGADD-GVKYVRKELL---LQLSDNAMPP-DVHKPEALLGALQTPKLLLLDNIWTQEQLTD-VRGAKLVDGSLIIVTTRIGSFADGWHAGTVVTSLPMPGLEDADALALFREMSALSQPTPANLRQLEDEIVRSCAGMPLALAVAGGALLNTSAIGDWEAIQMALRSGETIGDDARMDQLLDLSLKGLKDYVKDMFLDACTVMYGRDPQHALCAWQAMHVGRDLRTSLKQLRDRSLLEIRKTEFEDLKYLWVHDVLKAVGGDMARE--------TRVWQAT-------QKAKIGVTAMRLTHKKQIDVAQHDDMRDLQVLLMDDLAGDSPDPVFSAASTQLKWLSLQHCATDHVADVAKFKSLGVLDLS 1986
            +V+ IYG GG+GK+TLA A+Y   +L   F+ +     V    D  G+ +V+ +L+   L+L D  +P  D+          Q   L+LLD++  Q+ L   + G   V GS II+T R  +     +         +  +   D+L LF   +   +  PA L  L  +IV +  G+PLAL V G  L        W  +   LR+      D  + + L +S   LK   K MFLD      G + + A   W+ +      R  L+ L +RSL+++     +D   L +HD L+ +G  +AR         +R+W          ++    + A+ L  +   +  Q +  + +  L   D++G   D  F+ + + L+WL  + C     A     + L VLDLS
Sbjct:  294 QVVGIYGIGGVGKTTLATAIYN--KLFDKFECRSFLKDVRETIDGKGIGHVQSQLISDILKLHDYRVPDSDIGINTIQSRCTQKKVLILLDDVDRQDHLDKLIGGCSFVSGSRIIITCRDKTLLKSKY------EYELKEMNAKDSLHLFSRFAFDGKEPPAELAALSSDIVATTGGLPLALMVIGSLLRGVKDRIVWREMLEKLRNAP----DETVQEKLRISYDTLKYKEKQMFLDIACFFIGTEKRIATYLWEDLKFFP--RIGLQILINRSLIKV-----DDNNELRMHDQLRDLGRAIARPEDMEPWRCSRLWDEEAIKVLRRKEENEKIEALHLDERGSREFMQRESFKRMPNLKFLDVSGVDFDTDFNDSLSVLRWLKWEGCPESFEATNVHLEKLVVLDLS 683          
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Match: A0A835YPS3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS3_9STRA)

HSP 1 Score: 650 bits (1677), Expect = 2.820e-228
Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 1
Query:    1 MHATLDIVAANEKQQQQQLNSPAIAELRRLAAQGATIPLAAHKALLSNFEAAAHAALQEAAATRTRVLGEMRGTFMEKYAELAQEVQAKGKAAQRVGELEQALEQALAAKAQLKEMAKAAVKETIAAERQGGLMRGRAKAAEAEAAALRRGISAASLRXXXTELAARLXXXXXXXXXXXXXXXXXXXXXXXXXGRVEASESEAAWLRKEADAQQAEISRIRSALRRAKSKAEAAQASVAEVTAFAERQLVAGHEAKLQALRALRVDMEGQMAAARAELEARLSNEQQRSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVNAELKRAFAALAEQSKQDLEVTSAMWRTQVSGLVHEVTLRDARIAELSAKIADRPTRDEDAHRQLMAATAEVASLRAELQLKDEVLEMYREEVVKLAREAAEPAQAKADARTNAPALPRAPRRDAATATASLQSS 1374
            MHATLDIVAANEKQQQQQLNSPAIAELRRLAAQGATIPLAAHKALLSNFEAAAHAALQEAAATRTRVLGEMRGTFMEKYAELAQEVQAKGKAAQRVGELEQALEQALAAKAQLKEMAKAAVKETIAAERQGGLMRGRAKAAEAEAAALRRGISAASLRXXXTELAARLXXXXXXXXXXXXXXXXXXXXXXXXXGRVEASESEAAWLRKEADAQQAEISRIRSALRRAKSKAEAAQASVAEVTAFAERQLVAGHEAKLQALRALRVDMEGQMAAARAELEARLSNEQQRSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVNAELKRAFAALAEQSKQDLEVTSAMWRTQVSGLVHEVTLRDARIAELSAKIADRPTRDEDAHRQLMAATAEVASLRAELQLKDEVLEMYREEVVKLAREAAEPAQAKADARTNAPALPRAPRRDAATATASLQSS
Sbjct:    1 MHATLDIVAANEKQQQQQLNSPAIAELRRLAAQGATIPLAAHKALLSNFEAAAHAALQEAAATRTRVLGEMRGTFMEKYAELAQEVQAKGKAAQRVGELEQALEQALAAKAQLKEMAKAAVKETIAAERQGGLMRGRAKAAEAEAAALRRGISAASLRXXXTELAARLXXXXXXXXXXXXXXXXXXXXXXXXXGRVEASESEAAWLRKEADAQQAEISRIRSALRRAKSKAEAAQASVAEVTAFAERQLVAGHEAKLQALRALRVDMEGQMAAARAELEARLSNEQQRSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVNAELKRAFAALAEQSKQDLEVTSAMWRTQVSGLVHEVTLRDARIAELSAKIADRPTRDEDAHRQLMAATAEVASLRAELQLKDEVLEMYREEVVKLAREAAEPAQAKADARTNAPALPRAPRRDAATATASLQSS 458          
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Match: A0A835YQV3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQV3_9STRA)

HSP 1 Score: 251 bits (642), Expect = 1.890e-77
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1
Query: 1582 MRSFARAPEAVLLAWLVWGHCVARRRAHAVHARRVQRRGASEAGLETPRTALHSGCETFHRTSISEFLRRSVASCRAAAAATALRVRHPHTIHTLHLDSHGASRYVWPIPVVAYMGALNGNVLCT 1956
            MRSFARAPEAVLLAWLVWGHCVARRRAHAVHARRVQRRGASEAGLETPRTALHSGCETFHRTSISEFLRRSVASCRAAAAATALRVRHPHTIHTLHLDSHGASRYVWPIPVVAYMGALNGNVLCT
Sbjct:    1 MRSFARAPEAVLLAWLVWGHCVARRRAHAVHARRVQRRGASEAGLETPRTALHSGCETFHRTSISEFLRRSVASCRAAAAATALRVRHPHTIHTLHLDSHGASRYVWPIPVVAYMGALNGNVLCT 125          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350432 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBJ0_9STRA0.000e+0100.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A836CFU9_9STRA2.620e-11545.97NB-ARC domain-containing protein n=1 Tax=Tribonema... [more]
A0A835ZFV0_9STRA1.370e-8246.59NB-ARC domain-containing protein n=1 Tax=Tribonema... [more]
A0A836CD20_9STRA5.630e-2531.12P-loop containing nucleoside triphosphate hydrolas... [more]
A0A2G2X548_CAPBA9.290e-2029.47NB-ARC domain-containing protein n=1 Tax=Capsicum ... [more]
A0A2K3PES9_TRIPR3.720e-1926.54Disease resistance protein (TIR-NBS-LRR class) n=1... [more]
UPI002016CB5E6.740e-1925.05disease resistance protein L6-like n=1 Tax=Rhodamn... [more]
A0A6P5NJ54_ARADU1.690e-1828.05ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase n=... [more]
U5CPS8_AMBTC1.960e-1825.81TIR domain-containing protein n=3 Tax=Amborella tr... [more]
UPI0020174FD02.850e-1826.65disease resistance protein L6-like n=1 Tax=Rhodamn... [more]

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BLAST of jgi.p|Trimin1|350432 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YPS3_9STRA2.820e-228100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQV3_9STRA1.890e-77100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_62contigContig_62:628272..635077 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350432|estExt_Genemark1.C_Ctg_620080
DescriptionTMV resistance protein N-like
COG categoryS
Max annot lvl35493|Streptophyta
EggNOG OGs28I92@1|root,2QQJE@2759|Eukaryota,37M5G@33090|Viridiplantae,3GG0S@35493|Streptophyta
Evalue3.21e-19
Seed ortholog13333.ERN15171
Hectar predicted targeting categoryother localisation
TranscriptId350754
TrackFilteredModels1
ProteinId350432
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350432gene_6556Tribonema minus UTEX_B_3156 geneContig_62 628272..635077 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350432Trimin1|350432|estExt_Genemark1.C_Ctg_620080Tribonema minus UTEX_B_3156 polypeptideContig_62 628272..635077 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6556_1exon_6556_1Tribonema minus UTEX_B_3156 exonContig_62 628272..628422 +
exon_6556_2exon_6556_2Tribonema minus UTEX_B_3156 exonContig_62 629993..630136 +
exon_6556_3exon_6556_3Tribonema minus UTEX_B_3156 exonContig_62 630287..630444 +
exon_6556_4exon_6556_4Tribonema minus UTEX_B_3156 exonContig_62 630529..630791 +
exon_6556_5exon_6556_5Tribonema minus UTEX_B_3156 exonContig_62 630880..631010 +
exon_6556_6exon_6556_6Tribonema minus UTEX_B_3156 exonContig_62 631100..631653 +
exon_6556_7exon_6556_7Tribonema minus UTEX_B_3156 exonContig_62 631749..632093 +
exon_6556_8exon_6556_8Tribonema minus UTEX_B_3156 exonContig_62 632189..632430 +
exon_6556_9exon_6556_9Tribonema minus UTEX_B_3156 exonContig_62 633041..633260 +
exon_6556_10exon_6556_10Tribonema minus UTEX_B_3156 exonContig_62 634004..634139 +
exon_6556_11exon_6556_11Tribonema minus UTEX_B_3156 exonContig_62 635016..635077 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6556CDS_6556Tribonema minus UTEX_B_3156 CDSContig_62 628272..628422 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6556 ID=mRNA_6556|Name=jgi.p|Trimin1|350432|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2406bp|location=Sequence derived from alignment at Contig_62:628272..635077+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAACAGCGTCGCTGCATTTTCTTCACTGGTCCGCGCACGGCGCCGCCA
CCCCCCCGGAGACGCATCGCAAGCAGACGGAGAGAGCAGCGCATCGCCGG
GCCTGAGCACAGCAGCGCAGTCTCGGCAGCAAGAGCAGCCGGAGACTCCA
GGGGATGACGTGCCGGGGCGCCGCACGGTGCTGTGGCGTGGCGATCGTTA
CGGGCGTGCTGTGGGCATAGCGAGCATGTGCATCGCTTCGTTTCTGCTCG
AGTCTTCGCTGGGCCCTCAGAACATGCCCTGCTTGCGGCCCACTCTGATA
GAGGTTGCTGACGTTGCCGGCGAGATCGGCGAAGCTCTGCCGTATGTCGA
TCACGTTGCCAAGCTGCTCAAAGCGATTGCGAAGGTGGTGCAGGACAACA
TTGAAGTCATGACAGCCTGCGACGAAACCACATGCAATCTTGAAAGGTTG
AAGATCACATTGAACAAGCGTACTGATCCAAGGTTCAAGCTACAGCAGGA
TGCACAGCTCGTCGTCGACATCATGAAGCAGTTGGATGCAGAGGTGCGGG
GTCGCAACACCAAGGGACGCGTCAGAAAGCTCATTTCTGCCGGCCGTCTG
ATAACGACCATCACCGACTTGAACAAAAAAATCGACTCAGCCATCGGCAA
ACTCGACCTGGCTGTGGACGTGACGACTGTGGAGGTCGCCGTGGAGACGA
GGGAGATCGTCGGAACTGCATTGTTACGCGAGGACCCAGGGCCCCTCCGC
GTCGAAGGACAGTACGGGCACCGGTCTCTCCTGCCCAAAGAAGAACTCAG
CTTCTCGTCTGGGGGCCCCCCGCGAGTTATTGTGATTTACGGCACAGGCG
GAATGGGCAAGAGCACGCTGGCGCGCGCGCTGTACGAAGAGCGGCGGCTG
CTCCCATGCTTTCAGAGCAAGCACGACGCTGCGAGCGTCTCAGTAGGCGC
AGACGATGGCGTCAAGTACGTGCGAAAGGAGCTGCTGCTGCAACTGAGCG
ACAACGCCATGCCTCCAGATGTCCACAAACCGGAAGCTCTGCTCGGAGCG
CTGCAGACGCCGAAGCTGCTCCTGCTCGACAACATCTGGACGCAGGAGCA
GTTGACGGATGTTCGTGGCGCTAAGCTTGTCGACGGGTCCTTGATCATCG
TCACCACTCGCATTGGCAGTTTCGCTGATGGGTGGCATGCCGGCACAGTT
GTCACGAGCTTACCGATGCCGGGGTTGGAGGACGCCGACGCACTGGCTCT
CTTTCGGGAGATGTCGGCGCTGTCACAGCCCACGCCGGCCAACCTCCGAC
AGCTGGAAGACGAGATTGTACGGTCGTGCGCGGGCATGCCGCTTGCGCTC
GCAGTCGCAGGAGGCGCTCTATTGAACACGAGTGCGATCGGAGACTGGGA
GGCGATCCAGATGGCGCTGCGATCTGGAGAGACAATCGGTGACGACGCCC
GGATGGACCAGCTCCTTGACCTGTCTCTCAAGGGTCTCAAAGACTATGTC
AAGGACATGTTCTTGGACGCTTGCACTGTCATGTACGGCCGCGACCCGCA
GCACGCCCTCTGTGCGTGGCAAGCAATGCACGTTGGCAGGGATCTTCGCA
CCAGCCTCAAGCAACTCAGAGACCGCTCACTGCTGGAAATTCGCAAGACG
GAATTTGAGGACCTGAAGTATTTGTGGGTGCACGACGTGCTCAAAGCAGT
CGGGGGCGACATGGCACGCGAAACCCGTGTGTGGCAGGCTACTCAGAAAG
CGAAGATCGGTGTCACGGCCATGCGGCTCACCCACAAGAAGCAAATCGAC
GTCGCACAACACGACGACATGCGAGATCTGCAGGTCCTCCTGATGGACGA
CCTAGCCGGAGACAGTCCCGATCCGGTCTTCAGCGCTGCGAGCACGCAGC
TGAAGTGGCTGAGCCTCCAGCACTGCGCCACTGATCATGTGGCAGACGTC
GCGAAGTTCAAGAGTCTGGGCGTCTTGGACTTAAGCCGGTGCTCCGGTAT
CACGTCTCTACCTGATGCGCTCGGCGACCTCGAGGAGCTGAAGGTGCTCA
TCTTCTGCGAGTGCAGAAGCCTCGGCAGCCTGGGCGAGTCATTCGGCAAC
CTGACAGCATTGACATTACTCGACTTGTCCAACTGCAGGCGACTCGCGAG
TCTGCCCGAGTCCTTCTGCAACCTGACAGCGTTGACTCAGCTGAGGATGC
AGTACTGCTTCGGCAAAGTGCGCAGCGACCGCGGTGCTCGGGTGCTCGTC
GTGGGGCATGCGCGTGGGGCTCTGCTGGGCGTGGCCGTGGCGCGGCACCT
CGGGGCTCCGCTGGTCCGGTGGGTGGACGGGACTGGCGTCTTCGGTCACC
ACCCCGCCGTGCGCGTGGAGGACCGTAGCGGGTCCATCGAACCTCCTGTC
GACTAA
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protein sequence of jgi.p|Trimin1|350432

>Trimin1|350432|estExt_Genemark1.C_Ctg_620080 ID=Trimin1|350432|estExt_Genemark1.C_Ctg_620080|Name=jgi.p|Trimin1|350432|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=802bp
MNSVAAFSSLVRARRRHPPGDASQADGESSASPGLSTAAQSRQQEQPETP
GDDVPGRRTVLWRGDRYGRAVGIASMCIASFLLESSLGPQNMPCLRPTLI
EVADVAGEIGEALPYVDHVAKLLKAIAKVVQDNIEVMTACDETTCNLERL
KITLNKRTDPRFKLQQDAQLVVDIMKQLDAEVRGRNTKGRVRKLISAGRL
ITTITDLNKKIDSAIGKLDLAVDVTTVEVAVETREIVGTALLREDPGPLR
VEGQYGHRSLLPKEELSFSSGGPPRVIVIYGTGGMGKSTLARALYEERRL
LPCFQSKHDAASVSVGADDGVKYVRKELLLQLSDNAMPPDVHKPEALLGA
LQTPKLLLLDNIWTQEQLTDVRGAKLVDGSLIIVTTRIGSFADGWHAGTV
VTSLPMPGLEDADALALFREMSALSQPTPANLRQLEDEIVRSCAGMPLAL
AVAGGALLNTSAIGDWEAIQMALRSGETIGDDARMDQLLDLSLKGLKDYV
KDMFLDACTVMYGRDPQHALCAWQAMHVGRDLRTSLKQLRDRSLLEIRKT
EFEDLKYLWVHDVLKAVGGDMARETRVWQATQKAKIGVTAMRLTHKKQID
VAQHDDMRDLQVLLMDDLAGDSPDPVFSAASTQLKWLSLQHCATDHVADV
AKFKSLGVLDLSRCSGITSLPDALGDLEELKVLIFCECRSLGSLGESFGN
LTALTLLDLSNCRRLASLPESFCNLTALTQLRMQYCFGKVRSDRGARVLV
VGHARGALLGVAVARHLGAPLVRWVDGTGVFGHHPAVRVEDRSGSIEPPV
D*
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mRNA from alignment at Contig_62:628272..635077+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6556 ID=mRNA_6556|Name=jgi.p|Trimin1|350432|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6806bp|location=Sequence derived from alignment at Contig_62:628272..635077+ (Tribonema minus UTEX_B_3156 )
ATGAACAGCGTCGCTGCATTTTCTTCACTGGTCCGCGCACGGCGCCGCCA CCCCCCCGGAGACGCATCGCAAGCAGACGGAGAGAGCAGCGCATCGCCGG GCCTGAGCACAGCAGCGCAGTCTCGGCAGCAAGAGCAGCCGGAGACTCCA GGTGAGCGCATGTGCGATGAATGTGAGGCCTCCTGCACCGTGATGCAGTA GGCGCCCGCATCTGCTGCTGCCGTCGCACAAATGAAGAAACTCGACCAGC ACCGCCTCCGTGCTTCATCGCTTCAGGTTTGACCATGACAAGTGACCATC TCCGCCGCCGTCGTCGAATCCTGCGCTTCCTGAAACAGAGTGAAACAGAG TGTCTCACGTCGCGTTTGGTTGGATGTATCCTGTGCAATTCATTTGATCG TATTCTGTGCAATGCAAAGACGCAACCCGCCCAGGGCTCTATGTCGTGAC ATATCTCTGCGCCGTCGGCAAAATCAGGACGACCTCGTTGATGGGCATAC ACGTTAGACCCTGCAATGTTATTTTAACGGAGATCCACAGTAGGTCTGTA TTGCAGCAAATACAATTCATTCATTCGTCTTCACCCTCCTGGTCCTTTGA ACTACATGTGAGACCATTGTTCATGTACAGCGACTAATCGGGTCCATTGT GTTGAAGTCCTCACCCTGGCTGAGTCTGCCATGTCATTGATGGCAATGAT GTGGACGAAGATGCCGATGATGCTGGCATGATGCTGGTGATGTCGAATCC CAGCAGTGGTAGACGACCTCGTTGGGCGTTCGCCTGTATAGGAAGAGCCC TGTATGGAACCTCTCTGGATTCACTAGGCTGCTCTCCTGCGTAGGCCGAA CCCTGTATAGAGCCTCTGCCACGTCCTGTATCGGCCACTCCTGCTCAGAG CCCTGTGTAGGACCTGGTGTGCTGATGCCGTATTGAGACGCTCGCAGGTG GATCCCTCCCTATTCCCGCTGCTCCTGTATAAGGACGCGCACGGTATTGT GCCTGCCGCTCCCGTATACGTGCTCTCAGCTCCCTTGCGCCAGGCGCACG CGATCACTGTTCTTAGACAGGTCGCACGATCACTGACACGTGCATCGTAT TTGGTGTCGCACTGATGCTGTGCGGATTTTCCTCGGCTGCGGCCTGCAAG CCGGACGCGCACTTGACTGTGGTATGCATTTTCTATTACAAGCACTTCCT TGGTGGCCGGTGACTAGCCTTATGACGCACGTCAACTATGACAATCTAGC AAGAAATACTCAACGCAATGCAATATCTGATGGTCTCAGGAACAACAGGC TGGGCACTTTGCCAGTTTCTTAGACCTCGAATGAATGCCTTTGCAGTTTT TGTGATTCAGGACAAAGTGCGCACTTTGTAAGATTGCCGTTGTGCACTCT GCATACGTGAATGCATCCCGCGGTCTCGTGCACGCATTTCTGCGACACCA CCGCGCCGTGCGTCGGACGTCGAGTGGGCGTGCGCTTGTTGTCAGTTGGC AGCGACCGCTGTGCCACCTTGTTTCACGAATGCGTCATTGCGGGTGCATT GTCCGTCCCGGTATTTCTGCATTAACGCCAGAACTCCAAATGGATGGCTG CTGTCTGCGCACCCGGCGTGCCCTGCCACATGAGGCATTGCTTTTTCGCC CGCTAGATTGCTGCCTGTTCGTTCGCCTCTGCCGGCCCGCTTGATTCCGC GTTTGCACGTGTCATCGACAGGGGATGACGTGCCGGGGCGCCGCACGGTG CTGTGGCGTGGCGATCGTTACGGGCGTGCTGTGGGCATAGCGAGCATGTG CATCGCTTCGTTTCTGCTCGAGTCTTCGCTGGGCCCTCAGAACATGCCCT GCTTGCGGCCCACTCGTACGCCTTCATTCCGTACACCCGCTGAAACGTGT TCCGCTGTTCTGCGTCATCACAGAATGGGTGCCTGCCGCTCAGTCCTGCA ATGTGGACACGGATTCGTGAAAGACCCGGCCGTCTGGGATGCGGTCACGG CCGCTGCGAACGCAGTGATAGAGGTTGCTGACGTTGCCGGCGAGATCGGC GAAGCTCTGCCGTATGTCGATCACGTTGCCAAGCTGCTCAAAGCGATTGC GAAGGTGGTGCAGGACAACATTGAAGTCATGACAGCCTGCGACGAAACCA CATGCAATCTTGAAAGGTTGAAGGTACGTACAACTGCGCTGAACATCGTG CAATGATACTTCTTTGGCTGCGCGCTGACCGGTGTTGTGTCTGTGCTGTT TCCGCAGATCACATTGAACAAGCGTACTGATCCAAGGTTCAAGCTACAGC AGGATGCACAGCTCGTCGTCGACATCATGAAGCAGTTGGATGCAGAGGTG CGGGGTCGCAACACCAAGGGACGCGTCAGAAAGCTCATTTCTGCCGGCCG TCTGATAACGACCATCACCGACTTGAACAAAAAAATCGACTCAGCCATCG GCAAACTCGACCTGGCTGTGGACGTGACGACTGTGGAGGTCGCCGTGGAG ACGAGGGAGATCGTCGGAACGTAAGTAGTCTTTCACTGTGTGCACCTGCC GCAGGTATTGTGCGTGTTGCCTCACACTTGCAACTGGTACCTCGTTCATT GTGTGCAGTGCATTGTTACGCGAGGACCCAGGGCCCCTCCGCGTCGAAGG ACAGTACGGGCACCGGTCTCTCCTGCCCAAAGAAGAACTCAGCTTCTCGT CTGGGGGCCCCCCGCGAGTTATTGTGATTTACGGCACAGGTGAGCCGCCT GCCGTTCCTGCGTTGCTGCATTTTCAGCAGGAGTGTTACTCACATGCACG TCGTCCGTGTGCTCTGGTGTCGCCACAGGCGGAATGGGCAAGAGCACGCT GGCGCGCGCGCTGTACGAAGAGCGGCGGCTGCTCCCATGCTTTCAGAGCA AGCACGACGCTGCGAGCGTCTCAGTAGGCGCAGACGATGGCGTCAAGTAC GTGCGAAAGGAGCTGCTGCTGCAACTGAGCGACAACGCCATGCCTCCAGA TGTCCACAAACCGGAAGCTCTGCTCGGAGCGCTGCAGACGCCGAAGCTGC TCCTGCTCGACAACATCTGGACGCAGGAGCAGTTGACGGATGTTCGTGGC GCTAAGCTTGTCGACGGGTCCTTGATCATCGTCACCACTCGCATTGGCAG TTTCGCTGATGGGTGGCATGCCGGCACAGTTGTCACGAGCTTACCGATGC CGGGGTTGGAGGACGCCGACGCACTGGCTCTCTTTCGGGAGATGTCGGCG CTGTCACAGCCCACGCCGGCCAACCTCCGACAGCTGGAAGACGAGATTGT ACGGTCGTGCGCGGGCATGCCGCTTGCGCTCGCAGTCGCAGGAGGCGCTC TATTGAACACGAGTGCGATCGGAGACTGGGAGGTGAGCAAGCAATTCACC AAAAGGTTTGCTACACAAGTGCCAAGTCTGGTTGTAGATTGATGTGCCTG CTTTTTGTCGTTTGCTATGCACTCCAGGCGATCCAGATGGCGCTGCGATC TGGAGAGACAATCGGTGACGACGCCCGGATGGACCAGCTCCTTGACCTGT CTCTCAAGGGTCTCAAAGACTATGTCAAGGACATGTTCTTGGACGCTTGC ACTGTCATGTACGGCCGCGACCCGCAGCACGCCCTCTGTGCGTGGCAAGC AATGCACGTTGGCAGGGATCTTCGCACCAGCCTCAAGCAACTCAGAGACC GCTCACTGCTGGAAATTCGCAAGACGGAATTTGAGGACCTGAAGTATTTG TGGGTGCACGACGTGCTCAAAGCAGTCGGGGGCGACATGGCACGCGAAAC CCGTGTGTGGCAGGCTACTCAGGTCAGTCGTTTGACTTCGGCAACACTGC GCAGGGTGCATATTTCATTGAATTCTGCCTTCTGACATTATACGTCCGTG ATCTTTGCGATTCACAGAAAGCGAAGATCGGTGTCACGGCCATGCGGCTC ACCCACAAGAAGCAAATCGACGTCGCACAACACGACGACATGCGAGATCT GCAGGTCCTCCTGATGGACGACCTAGCCGGAGACAGTCCCGATCCGGTCT TCAGCGCTGCGAGCACGCAGCTGAAGTGGCTGAGCCTCCAGCACTGCGCC ACTGATCATGTGGCAGACGTCGCGAAGTTCAAGAGTCTGGGCGTCTTGGA CTTAAGCCGGTGAGAATTAGGGGTTGCAATATTGTGTGTTTCCACGCAGC CTATCATGGATTTCATTATGTGTTTCCAATGATGTCAACTTAAGGCAAAG GTGTCAAATATGTAACTCAGCTTGCGGCAACGCACATTGGAATAAGCTCA CAATGCATCGTACTGTAAGGGTTGCAAGCTGGACAGGATTGTCAACAATG CATGAAAGAGCAGCGACAGCAATTCATCCGCTCAAATGAATACTTCAACA TGGTGTGATTTGCTATGGAAAATCCTTAAGTTGACGCCAAGGCACAAACG GTTGACGTGTCCCACGACCTGTGAGCATGGGTTTCTAACATCATCATGCT CCCCTTATGCGGCTGCCTCGAGAATTTCTGCATCTGTTGAACTGCCGCGA CGGACGCCCCGCACACCGGCGCGAGCTGCTCGCCGCGTGCTGACGGTAGA TGACTCGTGCATCATGATCTATTTCACATGTTTAGACCGTTGTCGTAGGT CTTGCCATAGTTGCAGGTGTGTCAAGAACTATGAAGTGGGTTTTCTCACA TTGTTTTCCGACCTCTGTGACAGCTGGAACACCTCGAATTCTGAAATGCG GTGACCTCGTGTGCCACAGGTGCTCCGGTATCACGTCTCTACCTGATGCG CTCGGCGACCTCGAGGAGCTGAAGGTGCTCATCTTCTGCGAGTGCAGAAG CCTCGGCAGCCTGGGCGAGTCATTCGGCAACCTGACAGCATTGACATTAC TCGACTTGTCCAACTGCAGGCGACTCGCGAGTCTGCCCGAGTCCTTCTGC AACCTGACAGCGTTGACTCAGCTGAGGATGCAGTACTGCGTACAGCTCAG CAGCTTGTCCGACTCATTCGGCAACCTGACAGCGTTGACTTCACTCGACT TGCGGTACTGCAAGTCACTTGTGAGCCTGCCCGAGTCCTTCGGCAACCTG ACAGCATTAACCTCTCTCAACTTGAAGTTCAGCGCAGTCGACGATGCCCT TTTGGTCTCCCTTGTCTTGCGCAAACATGGCGCAATGGCTGCTCGTTCGC TGAAGTTGCAGCGAAGTGCCAGATGGCTCTTGAAAACAAAAATCACGAGC CTCCGCGCCTTGCCGACTTCATTCGGCAACCTGACGGCGTTGACCACACT CGACTTGAGCGGATGCGATGTACTCAACCACTTGCCCGAGTCATTCGGCG ACCTGACAAAATTGACTGACCTCAAGTTGAGGAGGTGCCAGCAGCTGCAT ACTCTGCCGGAGTCATTCGGCAACCTGATAGCAATGACCAAGCTCAACCT TAGGCACTGCATTAGGCTCGTCAAGTTGCCTGACTCATTCGGCAACCTGA CAGCGTTGACTTTCCTGACGCTGGGGGATTGGCGGCGGGGGTGCACCTTG CTCAGCAGCCTGCCCGACTCATTCGGCAACCTGACAGCGTTGACTTCACT CGACTTGCGGTACTGCGAGTTACTCCGGAGTCTGCCTGAGGCCTTCGGCA ACCTGACAGAGATGTGTGCGCTGATGTTCACATTATCCTCTACGCACGCC TGCTGCACGAGCCCTTGCGCACCGCACTGGAGTTCGGCAAAGTGCGCAGC GACCGCGGTGCTCGGGTGCTCGTCGTGGGGCATGCGCGTGGGGCTCTGCT GGGCGTGGCCGTGGCGCGGCACCTCGGGGCTCCGCTGGTCCGGTGGGTGG ACGGGACTGGCGTCTTCGGTCGCCGGGCGCGGGCCGAGTCGTCATTCCTA AATGAGACGTGCCTACGCACGGCGTCGACGCGGCGGATGACGCTGCACGA GATATTTGCAATTTCGGGAGCGACATATTCTTTCGCAACGAGGATGACGA TGACATGATAGTCACACGGCATTGATGCGATGCGCTCATGCAGCTCTTCC TGCACGACTTATGGTGCACAGCGTGATCACTCCCGGGGCACTTCACGCTG CAGCACACATCAGCCACACGGCGGCCGCACATTGAGTGCGACCCCTGCGC GCCACATGGTTGATAGCGAGCAGGCCTTCATGTGGGCAAAGCAGATCAAG CACATGGAAATGACAAATAGGACAGGCCGCGAACACGTGTAGAGAAACCA GGGGCACTTGTATTCACAATCTATAATACAGACCGTACCGTATCCTGAGG CTGCAATCGCCCTTCACCTGTTATTTGCCCTGGCATGCCCTGCGCACTGA CCGACATCAACTCTGTCACAGCACGGCCTACACATGCCGTGTATTCACTT GGCACTAGGAGTGTTGCTGTTGCAACCCTTGCACACGGCGAAAGGACTGT TTTGGAGTGTTACAATACCTTCCTTCCGGCGCGCCCCATTCGCCGACACG TTGACACTCTTGCTGATCACCTGGTCGTTCGCCATCTTGAACGAAGTCGT GCTGCCATCTATCTTGTGCACTACGCCGAGCCCCGAGAGCTTGTCGTCCT TATAGTCGAAGCAAGTTACTGTGCCATCTGTGCAGGACTTCACTGCCTGC CCTATGGCCATCCACGTAAGTAAAGGTCGTCTCGCTTCCATCGAGCTGAC GTGAAGTGGCGGGGCCGTCCTGTTTGCCGTCCTTGAAAGTGCAGGTCACC ACCCCGCCGTGCGCGTGGAGGACCGTAGCGGGTCCATCGAACCTCCTGTC GACTAA
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Coding sequence (CDS) from alignment at Contig_62:628272..635077+

>mRNA_6556 ID=mRNA_6556|Name=jgi.p|Trimin1|350432|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2406bp|location=Sequence derived from alignment at Contig_62:628272..635077+ (Tribonema minus UTEX_B_3156 )
ATGAACAGCGTCGCTGCATTTTCTTCACTGGTCCGCGCACGGCGCCGCCA
CCCCCCCGGAGACGCATCGCAAGCAGACGGAGAGAGCAGCGCATCGCCGG
GCCTGAGCACAGCAGCGCAGTCTCGGCAGCAAGAGCAGCCGGAGACTCCA
GGGGATGACGTGCCGGGGCGCCGCACGGTGCTGTGGCGTGGCGATCGTTA
CGGGCGTGCTGTGGGCATAGCGAGCATGTGCATCGCTTCGTTTCTGCTCG
AGTCTTCGCTGGGCCCTCAGAACATGCCCTGCTTGCGGCCCACTCTGATA
GAGGTTGCTGACGTTGCCGGCGAGATCGGCGAAGCTCTGCCGTATGTCGA
TCACGTTGCCAAGCTGCTCAAAGCGATTGCGAAGGTGGTGCAGGACAACA
TTGAAGTCATGACAGCCTGCGACGAAACCACATGCAATCTTGAAAGGTTG
AAGATCACATTGAACAAGCGTACTGATCCAAGGTTCAAGCTACAGCAGGA
TGCACAGCTCGTCGTCGACATCATGAAGCAGTTGGATGCAGAGGTGCGGG
GTCGCAACACCAAGGGACGCGTCAGAAAGCTCATTTCTGCCGGCCGTCTG
ATAACGACCATCACCGACTTGAACAAAAAAATCGACTCAGCCATCGGCAA
ACTCGACCTGGCTGTGGACGTGACGACTGTGGAGGTCGCCGTGGAGACGA
GGGAGATCGTCGGAACTGCATTGTTACGCGAGGACCCAGGGCCCCTCCGC
GTCGAAGGACAGTACGGGCACCGGTCTCTCCTGCCCAAAGAAGAACTCAG
CTTCTCGTCTGGGGGCCCCCCGCGAGTTATTGTGATTTACGGCACAGGCG
GAATGGGCAAGAGCACGCTGGCGCGCGCGCTGTACGAAGAGCGGCGGCTG
CTCCCATGCTTTCAGAGCAAGCACGACGCTGCGAGCGTCTCAGTAGGCGC
AGACGATGGCGTCAAGTACGTGCGAAAGGAGCTGCTGCTGCAACTGAGCG
ACAACGCCATGCCTCCAGATGTCCACAAACCGGAAGCTCTGCTCGGAGCG
CTGCAGACGCCGAAGCTGCTCCTGCTCGACAACATCTGGACGCAGGAGCA
GTTGACGGATGTTCGTGGCGCTAAGCTTGTCGACGGGTCCTTGATCATCG
TCACCACTCGCATTGGCAGTTTCGCTGATGGGTGGCATGCCGGCACAGTT
GTCACGAGCTTACCGATGCCGGGGTTGGAGGACGCCGACGCACTGGCTCT
CTTTCGGGAGATGTCGGCGCTGTCACAGCCCACGCCGGCCAACCTCCGAC
AGCTGGAAGACGAGATTGTACGGTCGTGCGCGGGCATGCCGCTTGCGCTC
GCAGTCGCAGGAGGCGCTCTATTGAACACGAGTGCGATCGGAGACTGGGA
GGCGATCCAGATGGCGCTGCGATCTGGAGAGACAATCGGTGACGACGCCC
GGATGGACCAGCTCCTTGACCTGTCTCTCAAGGGTCTCAAAGACTATGTC
AAGGACATGTTCTTGGACGCTTGCACTGTCATGTACGGCCGCGACCCGCA
GCACGCCCTCTGTGCGTGGCAAGCAATGCACGTTGGCAGGGATCTTCGCA
CCAGCCTCAAGCAACTCAGAGACCGCTCACTGCTGGAAATTCGCAAGACG
GAATTTGAGGACCTGAAGTATTTGTGGGTGCACGACGTGCTCAAAGCAGT
CGGGGGCGACATGGCACGCGAAACCCGTGTGTGGCAGGCTACTCAGAAAG
CGAAGATCGGTGTCACGGCCATGCGGCTCACCCACAAGAAGCAAATCGAC
GTCGCACAACACGACGACATGCGAGATCTGCAGGTCCTCCTGATGGACGA
CCTAGCCGGAGACAGTCCCGATCCGGTCTTCAGCGCTGCGAGCACGCAGC
TGAAGTGGCTGAGCCTCCAGCACTGCGCCACTGATCATGTGGCAGACGTC
GCGAAGTTCAAGAGTCTGGGCGTCTTGGACTTAAGCCGGTGCTCCGGTAT
CACGTCTCTACCTGATGCGCTCGGCGACCTCGAGGAGCTGAAGGTGCTCA
TCTTCTGCGAGTGCAGAAGCCTCGGCAGCCTGGGCGAGTCATTCGGCAAC
CTGACAGCATTGACATTACTCGACTTGTCCAACTGCAGGCGACTCGCGAG
TCTGCCCGAGTCCTTCTGCAACCTGACAGCGTTGACTCAGCTGAGGATGC
AGTACTGCTTCGGCAAAGTGCGCAGCGACCGCGGTGCTCGGGTGCTCGTC
GTGGGGCATGCGCGTGGGGCTCTGCTGGGCGTGGCCGTGGCGCGGCACCT
CGGGGCTCCGCTGGTCCGGTGGGTGGACGGGACTGGCGTCTTCGGTCACC
ACCCCGCCGTGCGCGTGGAGGACCGTAGCGGGTCCATCGAACCTCCTGTC
GACTAA
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