Trimin1|350429|estExt_Genemark1.C_Ctg_620075 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350429
Unique NameTrimin1|350429|estExt_Genemark1.C_Ctg_620075
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1073
Homology
BLAST of jgi.p|Trimin1|350429 vs. uniprot
Match: A0A835YR94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR94_9STRA)

HSP 1 Score: 1320 bits (3416), Expect = 0.000e+0
Identity = 1072/1072 (100.00%), Postives = 1072/1072 (100.00%), Query Frame = 0
Query:    1 MRRTLTTSAVALAIAQTGNSFHAPAGSCNTASRPSASRSVSTHAGYAARCVPLRMTSEGGDSEPEPKAKEDAPPAAVKVEEEVISAPKAAKAAAPXXXXXXXXXXXXXXXXKPDPQDYINSLNPFQYVEVVDTGDKPAAKAKXXXXXXXXTKAPAAEVPRPKPAAAATAVDSKAEEESGAEVEEDIVESVKEILDEAQELEQAAEKKVKEEAAXXXXXXXXXXXXXXXXXXXKLKPAVQPKEEALVEKVKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAVKPPAAAKPAKPAXXPXXXXXXXXXXXXXXXXXPKLSVXXXXXXXXXXXXSRVEKAGEAVAGAAGGISKLLGGLFDVKGPAAVRDPQTDPTARGMLSKAKGDYSGKNLPPVDKAVLDKAMEERGGVLNEVFWKEQWAELEEEAAKAAIAARDKVKEAPEPKAEAPTKTEXXXXXXXXXXXXXXPSTPSLDIGGIFGGXXXXXXXXXXXXXXXXXXXXXPAPPAPVAEKPKXXXXXXXAVEKSAPKAAAKAEEPAGGGLFGGLSGLFGGGDKAAAQPKEKPXXXXXXXXXXXXPPRAAPAPVKAAPPLVENPFANMFGKAVYDDEETTVPVRRAEPPAPAXXXXXXXXXXXXXXXXXXXXXXEGXXXXXXXXGGGSSSSKPAPKPAAAPKAAAPKPAAAAPXXXXXXXXXXXXATLRAPPAKKEAXXXXXXXXXXXXXXTTGGGIFGGFFGGGKPAAEPKPEAAPTKPVAAKPVAAAKPAPARSVRPLFGGSAAAPKKVEQAATPXXXXXXXXKPAAGGGGLGGFNLFGAKKPVEKAASAVSAAXXXXXXXXXXXXXXXXXXXXRTQKKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXXAGAVAKAADPFAFAQGKLSAANYDLFVARTKLFARGGINARNYYDTLETLFGKGPRGVGATIGNVVNALPASKARLVEDVYKGLNK 1072
            MRRTLTTSAVALAIAQTGNSFHAPAGSCNTASRPSASRSVSTHAGYAARCVPLRMTSEGGDSEPEPKAKEDAPPAAVKVEEEVISAPKAAKAAAPXXXXXXXXXXXXXXXXKPDPQDYINSLNPFQYVEVVDTGDKPAAKAKXXXXXXXXTKAPAAEVPRPKPAAAATAVDSKAEEESGAEVEEDIVESVKEILDEAQELEQAAEKKVKEEAAXXXXXXXXXXXXXXXXXXXKLKPAVQPKEEALVEKVKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAVKPPAAAKPAKPAXXPXXXXXXXXXXXXXXXXXPKLSVXXXXXXXXXXXXSRVEKAGEAVAGAAGGISKLLGGLFDVKGPAAVRDPQTDPTARGMLSKAKGDYSGKNLPPVDKAVLDKAMEERGGVLNEVFWKEQWAELEEEAAKAAIAARDKVKEAPEPKAEAPTKTEXXXXXXXXXXXXXXPSTPSLDIGGIFGGXXXXXXXXXXXXXXXXXXXXXPAPPAPVAEKPKXXXXXXXAVEKSAPKAAAKAEEPAGGGLFGGLSGLFGGGDKAAAQPKEKPXXXXXXXXXXXXPPRAAPAPVKAAPPLVENPFANMFGKAVYDDEETTVPVRRAEPPAPAXXXXXXXXXXXXXXXXXXXXXXEGXXXXXXXXGGGSSSSKPAPKPAAAPKAAAPKPAAAAPXXXXXXXXXXXXATLRAPPAKKEAXXXXXXXXXXXXXXTTGGGIFGGFFGGGKPAAEPKPEAAPTKPVAAKPVAAAKPAPARSVRPLFGGSAAAPKKVEQAATPXXXXXXXXKPAAGGGGLGGFNLFGAKKPVEKAASAVSAAXXXXXXXXXXXXXXXXXXXXRTQKKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXXAGAVAKAADPFAFAQGKLSAANYDLFVARTKLFARGGINARNYYDTLETLFGKGPRGVGATIGNVVNALPASKARLVEDVYKGLNK
Sbjct:    1 MRRTLTTSAVALAIAQTGNSFHAPAGSCNTASRPSASRSVSTHAGYAARCVPLRMTSEGGDSEPEPKAKEDAPPAAVKVEEEVISAPKAAKAAAPXXXXXXXXXXXXXXXXKPDPQDYINSLNPFQYVEVVDTGDKPAAKAKXXXXXXXXTKAPAAEVPRPKPAAAATAVDSKAEEESGAEVEEDIVESVKEILDEAQELEQAAEKKVKEEAAXXXXXXXXXXXXXXXXXXXKLKPAVQPKEEALVEKVKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAVKPPAAAKPAKPAXXPXXXXXXXXXXXXXXXXXPKLSVXXXXXXXXXXXXSRVEKAGEAVAGAAGGISKLLGGLFDVKGPAAVRDPQTDPTARGMLSKAKGDYSGKNLPPVDKAVLDKAMEERGGVLNEVFWKEQWAELEEEAAKAAIAARDKVKEAPEPKAEAPTKTEXXXXXXXXXXXXXXPSTPSLDIGGIFGGXXXXXXXXXXXXXXXXXXXXXPAPPAPVAEKPKXXXXXXXAVEKSAPKAAAKAEEPAGGGLFGGLSGLFGGGDKAAAQPKEKPXXXXXXXXXXXXPPRAAPAPVKAAPPLVENPFANMFGKAVYDDEETTVPVRRAEPPAPAXXXXXXXXXXXXXXXXXXXXXXEGXXXXXXXXGGGSSSSKPAPKPAAAPKAAAPKPAAAAPXXXXXXXXXXXXATLRAPPAKKEAXXXXXXXXXXXXXXTTGGGIFGGFFGGGKPAAEPKPEAAPTKPVAAKPVAAAKPAPARSVRPLFGGSAAAPKKVEQAATPXXXXXXXXKPAAGGGGLGGFNLFGAKKPVEKAASAVSAAXXXXXXXXXXXXXXXXXXXXRTQKKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXXAGAVAKAADPFAFAQGKLSAANYDLFVARTKLFARGGINARNYYDTLETLFGKGPRGVGATIGNVVNALPASKARLVEDVYKGLNK 1072          
BLAST of jgi.p|Trimin1|350429 vs. uniprot
Match: D7G5E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E7_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 3.630e-38
Identity = 102/234 (43.59%), Postives = 130/234 (55.56%), Query Frame = 0
Query:  860 KKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXXAGAVAKA---------------------ADPFAFAQGKLSAANYDLFVARTKLFARGGINARNYYDTLETLFGKGPRGVGATIGNVVNALPASKARLVEDVYKGLNK 1072
            K MDD+F+K VS +LRR+QSKIK+FQ +TDRFRGGL+ AP YY  VE LFG  NV +++ PLLA+LPE DKR+ L+    KA  AK                          LFG              A A A                     ADP+AFA  K+S  +Y+LF  RT L+ARGGINARNYYDTL T+FG   +GV A +  ++ ALP +K +L++DV  GL+K
Sbjct:  785 KTMDDSFLKKVSVMLRRNQSKIKKFQQLTDRFRGGLIKAPVYYAGVEELFGEDNVEEIIGPLLAALPENDKRKTLQAVYSKAQRAK-------------NGEGESDGGGIASLFGGWGGKSKADTAAKPAAAPAPAKKGXXXXXXXXXXXXXXXAADPYAFAAAKISGKDYELFKTRTTLYARGGINARNYYDTLATVFGA--KGVSAQLPALLKALPQNKRKLLQDVVDGLSK 1003          
BLAST of jgi.p|Trimin1|350429 vs. uniprot
Match: A0A6H5L7G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G1_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 6.330e-25
Identity = 103/178 (57.87%), Postives = 121/178 (67.98%), Query Frame = 0
Query:  860 KKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXXAGAVAKAA----------DPFAFAQGKLSAANYDLFVARTKLFARGGINAR 1027
            K MDD+F++ VS +LRR+QSKIK+FQ +TDRFRGGL+ AP YY  VE LFG  NV +++ PLLA+LPE DKR+ L+    KA  AK      XXXXXXXXXXXXXXXXXXXX    XXXXXXXX         AA          DP+AFA  KLS  +Y+LF ART L+ RGGINAR
Sbjct:  906 KTMDDSFLRKVSVMLRRNQSKIKKFQQLTDRFRGGLIKAPVYYAGVEELFGEDNVEEIIGPLLAALPENDKRKTLQAVYSKAQRAKNGEGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKGSMKKPAAGGKXXXXXXXDPYAFAAAKLSGKDYELFKARTTLYVRGGINAR 1083          
BLAST of jgi.p|Trimin1|350429 vs. uniprot
Match: K8YP81_NANGC (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YP81_NANGC)

HSP 1 Score: 72.0 bits (175), Expect = 5.380e-9
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 0
Query:  857 RTQKKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPAN-VSKVLQPLLASLPEQDKRRALED 936
            R  +KMDDAF++TVS  L+ ++ +I+ FQ  TDR+R  L++A AY  AV +LFG A    +VL PL   LPE  KRR L D
Sbjct:  555 RMPRKMDDAFLRTVSRKLQGNRLRIRSFQLQTDRYRNSLLSAGAYVDAVVSLFGSAKEAEEVLLPLTRWLPEASKRRGLSD 635          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350429 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YR94_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G5E7_ECTSI3.630e-3843.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7G1_9PHAE6.330e-2557.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K8YP81_NANGC5.380e-949.38Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 934..954
NoneNo IPR availableCOILSCoilCoilcoord: 180..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 608..811
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 503..524
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 679..708
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..591
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 629..649

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_62contigContig_62:583272..592005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350429mRNA_6550Tribonema minus UTEX_B_3156 mRNAContig_62 583238..592057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350429|estExt_Genemark1.C_Ctg_620075 ID=Trimin1|350429|estExt_Genemark1.C_Ctg_620075|Name=jgi.p|Trimin1|350429|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1073bp
MRRTLTTSAVALAIAQTGNSFHAPAGSCNTASRPSASRSVSTHAGYAARC
VPLRMTSEGGDSEPEPKAKEDAPPAAVKVEEEVISAPKAAKAAAPPKSAA
APKPAAKKAASKPDPQDYINSLNPFQYVEVVDTGDKPAAKAKPAAPAKPA
TKAPAAEVPRPKPAAAATAVDSKAEEESGAEVEEDIVESVKEILDEAQEL
EQAAEKKVKEEAAAAAEAVKEGVAGAKAAVEEKLKPAVQPKEEALVEKVK
AEKPKAEKLEAEKPKAEKPKAEKPRAEKPVAAAKSAPAKPAAAVKPPAAA
KPAKPAAAPKPAVAVPAKKPQAPAAPPKLSVAKTASPDAPPKASRVEKAG
EAVAGAAGGISKLLGGLFDVKGPAAVRDPQTDPTARGMLSKAKGDYSGKN
LPPVDKAVLDKAMEERGGVLNEVFWKEQWAELEEEAAKAAIAARDKVKEA
PEPKAEAPTKTEATTPPKPAAATEAQPSTPSLDIGGIFGGLFKQSEEPAK
KPAKAPPAAPKPAPPAPVAEKPKAPPAPVQAVEKSAPKAAAKAEEPAGGG
LFGGLSGLFGGGDKAAAQPKEKPAAAAKPAAKVVVPPRAAPAPVKAAPPL
VENPFANMFGKAVYDDEETTVPVRRAEPPAPAAKAPPAPPAPTPPAEAPK
APKSEGGGGFFGLFGGGSSSSKPAPKPAAAPKAAAPKPAAAAPPKPTAQA
PPKPAATLRAPPAKKEAPKEAAPPQKAAPAPTTGGGIFGGFFGGGKPAAE
PKPEAAPTKPVAAKPVAAAKPAPARSVRPLFGGSAAAPKKVEQAATPKAA
APAPEKPAAGGGGLGGFNLFGAKKPVEKAASAVSAATSSVKAAATSQAAT
AKAAAARTQKKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPA
YYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAKAAA
AAAAPKSAPTKSVASSGGGGGLFGFGAAKKAAPAPAAGAVAKAADPFAFA
QGKLSAANYDLFVARTKLFARGGINARNYYDTLETLFGKGPRGVGATIGN
VVNALPASKARLVEDVYKGLNK*
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