Trimin1|350421|estExt_Genemark1.C_Ctg_620057 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350421
Unique NameTrimin1|350421|estExt_Genemark1.C_Ctg_620057
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length129
Homology
[Close]
BLAST of jgi.p|Trimin1|350421 vs. uniprot
Match: A0A835YMH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH4_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.160e-79
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 
Query:    1 MMRLASAIAVALAGAVIFALNELYWGRMPVLEFSTYMAVLLFSLLGLGAVLSEKGQLAVFPSEPEGPEPEVVQSDTADRVVLDLDADALGRLSPEDTSAPLTDEQLGEEISRERSHTLTERIIQGIHG 128
            MMRLASAIAVALAGAVIFALNELYWGRMPVLEFSTYMAVLLFSLLGLGAVLSEKGQLAVFPSEPEGPEPEVVQSDTADRVVLDLDADALGRLSPEDTSAPLTDEQLGEEISRERSHTLTERIIQGIHG
Sbjct:    1 MMRLASAIAVALAGAVIFALNELYWGRMPVLEFSTYMAVLLFSLLGLGAVLSEKGQLAVFPSEPEGPEPEVVQSDTADRVVLDLDADALGRLSPEDTSAPLTDEQLGEEISRERSHTLTERIIQGIHG 128
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350421 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YMH4_9STRA2.160e-79100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_62contigContig_62:457508..457894 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350421mRNA_6529Tribonema minus UTEX_B_3156 mRNAContig_62 457294..458662 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350421|estExt_Genemark1.C_Ctg_620057 ID=Trimin1|350421|estExt_Genemark1.C_Ctg_620057|Name=jgi.p|Trimin1|350421|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=129bp
MMRLASAIAVALAGAVIFALNELYWGRMPVLEFSTYMAVLLFSLLGLGAV
LSEKGQLAVFPSEPEGPEPEVVQSDTADRVVLDLDADALGRLSPEDTSAP
LTDEQLGEEISRERSHTLTERIIQGIHG*
back to top