Trimin1|350397|estExt_Genemark1.C_Ctg_620019 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350397
Unique NameTrimin1|350397|estExt_Genemark1.C_Ctg_620019
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length442
Homology
BLAST of jgi.p|Trimin1|350397 vs. uniprot
Match: A0A835YR37_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR37_9STRA)

HSP 1 Score: 759 bits (1961), Expect = 3.390e-275
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0
Query:    1 MVTALEEGGLREAADAVYADATARGALPDSVLDSDWEFDVSALPPAVARLKVRAVLRGVLAAARSXXXXXXAPAAEDLVFVCGTGVQRSVRGAHERRFDMRSYLSAVLATEYTPPLAAHTPPMQAGCIAVPRERVAAWIAAHIDGPHVGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGAKLEGTPRCVDARACVPRGQGTKGTTVPASAAALLLSNQLTAERALADEPDFETELPPLVTKALARYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMERDFYGPMRSLASALDDFGGEDLVAATVKLEAAMAALAVETAGRSQRGGGTTAAQEQRARQLWEDGRSALNSYASSLNRIWQQGGGRGDVLAAVAAEPAGDASSARRRYIAYKKELAKCQQGGLGVNVCQNLLERYTAGGGAP 441
            MVTALEEGGLREAADAVYADATARGALPDSVLDSDWEFDVSALPPAVARLKVRAVLRGVLAAARSXXXXXXAPAAEDLVFVCGTGVQRSVRGAHERRFDMRSYLSAVLATEYTPPLAAHTPPMQAGCIAVPRERVAAWIAAHIDGPHVGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGAKLEGTPRCVDARACVPRGQGTKGTTVPASAAALLLSNQLTAERALADEPDFETELPPLVTKALARYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMERDFYGPMRSLASALDDFGGEDLVAATVKLEAAMAALAVETAGRSQRGGGTTAAQEQRARQLWEDGRSALNSYASSLNRIWQQGGGRGDVLAAVAAEPAGDASSARRRYIAYKKELAKCQQGGLGVNVCQNLLERYTAGGGAP
Sbjct:    1 MVTALEEGGLREAADAVYADATARGALPDSVLDSDWEFDVSALPPAVARLKVRAVLRGVLAAARSXXXXXXAPAAEDLVFVCGTGVQRSVRGAHERRFDMRSYLSAVLATEYTPPLAAHTPPMQAGCIAVPRERVAAWIAAHIDGPHVGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGAKLEGTPRCVDARACVPRGQGTKGTTVPASAAALLLSNQLTAERALADEPDFETELPPLVTKALARYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMERDFYGPMRSLASALDDFGGEDLVAATVKLEAAMAALAVETAGRSQRGGGTTAAQEQRARQLWEDGRSALNSYASSLNRIWQQGGGRGDVLAAVAAEPAGDASSARRRYIAYKKELAKCQQGGLGVNVCQNLLERYTAGGGAP 441          
BLAST of jgi.p|Trimin1|350397 vs. uniprot
Match: A0A0G4G2V7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G2V7_VITBC)

HSP 1 Score: 125 bits (313), Expect = 4.040e-29
Identity = 80/219 (36.53%), Postives = 121/219 (55.25%), Query Frame = 0
Query:  216 AAALLLSNQLTAERALADEPDFETELPPLVTKALARYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMERDFYGPMRSLASAL-DDFGGEDLVAATVKLEAAMAALAVETAGRSQRGGGTTAAQEQRARQLWEDGRSALNSYASSLNRIWQQGGGRGDVLAAVAAEPAGDASSARRRYIAYKKELAKCQQGGLGVNVCQNLLER 433
            AAAL +SN L  + A+A EP   + +     K+  +Y P +  +GD+YLF++   +    NW  + +Q K+  + R  +VSRM+RDF+ PMR LA ++ +D GG DL   T + E++M  L     G    GG  T   ++ A+  WE GR  +N+Y    N++  +     +V        A D S  R +YI  KK LAKCQQGG+GVNVC ++L++
Sbjct:   72 AAALAVSNALLLDDAVAVEPPLPSSI-----KSFRQYAPQLQLSGDFYLFDLAEDIRT-SNWDDVLDQFKVSGSARFVSVSRMDRDFFSPMRLLAKSVPEDEGGSDLEQVTERFESSMRRLQSVAKGV---GGDVTKELKKEAQDAWESGRQDINTYMRLANQLIAE---PAEVAPFTLLPSASDDSPRRDKYIKIKKVLAKCQQGGVGVNVCGDVLKQ 278          
BLAST of jgi.p|Trimin1|350397 vs. uniprot
Match: A0A7S3BBV3_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BBV3_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 1.200e-8
Identity = 59/204 (28.92%), Postives = 95/204 (46.57%), Query Frame = 0
Query:  240 ELPPLVTKALARYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMERDFYGPMRSLASALD-DFGGEDLVAATVKLEAAMAALAVETAGRSQRGGGTTAAQEQRARQLWEDGRSALNSYASSLNRIWQQGGGRGDVLAAVAAEPAGDA-SSARRRYIAYKKELAKCQ-QGGLGV-NVCQNLLERYTAGGG 439
            ELPP    A  +  P++  A DY++FE++  V +P+ W ++   ++  + G   + S++ER F  PMR LA +   D GGE++  +    + A+  L  E   RS  GG  T      A   W+  R +LN +  ++N           +   V   P G     ++ RY   KK+ A CQ +GG  +  +  NL+    AG G
Sbjct:   64 ELPPGAITAYNQNWPVIQLAADYFVFELRDQVADPQKWDLVGALMEGKSVGSAQSPSQIERRFILPMRVLALSFPPDAGGEEMQTSLNNFQKAVYRLGKEA--RSSPGGFETP-NPNAALGYWDAARQSLNEFLVAMNTAT-------GINRLVPIPPKGQGYPRSKARYTQLKKDSAICQNRGGEALAGIWGNLMVYGVAGTG 257          
BLAST of jgi.p|Trimin1|350397 vs. uniprot
Match: A0A7S4QFH0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QFH0_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.790e-5
Identity = 39/143 (27.27%), Postives = 70/143 (48.95%), Query Frame = 0
Query:  235 PDFETELPPLVTKALARYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMERDFYGPMRSLASALDDFGGEDLVAATVKLEAAMAALAVETAG-RSQRGGGTTAAQEQRARQLWEDGRSALNSYASSLN 376
            PDF +E      ++  +Y   +  + DYY++E++  + + + W  + +  ++         SR+ERDF  PMR L  ++D    + L  +    E AM+ ++  TAG R              A++ W++GR ALNS+  +LN
Sbjct:  110 PDFPSE----AVRSYLQYRGSLQISADYYIWELQEKMTDVDEWGEIGQLFRVNNNKGQGQPSRIERDFVNPMRILGLSMDPDVADSLRDSQFAFEKAMSKISKATAGYRRDLSVEIEPTAIPMAKEGWDEGRQALNSFFVTLN 248          
BLAST of jgi.p|Trimin1|350397 vs. uniprot
Match: D8LLG9_ECTSI (PPR_long domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG9_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 6.140e-5
Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 0
Query:    1 MVTALEEGGLREAADAVYADATARGALPDSVLDSDWEFDVSALPPAVARLKVRAVLRGVLAAARSXXXXXXAPAA-----EDLVFVCGTG 85
            ++++L + G  + A  V   A   GA+P S LDSD+E DVS LPPA+A++K R  L+ +L   R          A     EDLVFV GTG
Sbjct:  911 LISSLSDRGRWDDAQRVVEIAEKTGAIPASSLDSDFEVDVSQLPPAIAKVKARGTLQRILDVWRESSGNAEGGGATSSPLEDLVFVTGTG 1000          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350397 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YR37_9STRA3.390e-275100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4G2V7_VITBC4.040e-2936.53Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S3BBV3_9EUKA1.200e-828.92Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S4QFH0_9STRA4.790e-527.27Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
D8LLG9_ECTSI6.140e-541.11PPR_long domain-containing protein n=2 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_62contigContig_62:113029..116043 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350397mRNA_6471Tribonema minus UTEX_B_3156 mRNAContig_62 112971..116043 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350397|estExt_Genemark1.C_Ctg_620019 ID=Trimin1|350397|estExt_Genemark1.C_Ctg_620019|Name=jgi.p|Trimin1|350397|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=442bp
MVTALEEGGLREAADAVYADATARGALPDSVLDSDWEFDVSALPPAVARL
KVRAVLRGVLAAARSSGGGGAAPAAEDLVFVCGTGVQRSVRGAHERRFDM
RSYLSAVLATEYTPPLAAHTPPMQAGCIAVPRERVAAWIAAHIDGPHVGS
GGAAAAPAAAAAPSGPAATAAASRAVVRLCCAAAGAKLEGTPRCVDARAC
VPRGQGTKGTTVPASAAALLLSNQLTAERALADEPDFETELPPLVTKALA
RYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMER
DFYGPMRSLASALDDFGGEDLVAATVKLEAAMAALAVETAGRSQRGGGTT
AAQEQRARQLWEDGRSALNSYASSLNRIWQQGGGRGDVLAAVAAEPAGDA
SSARRRYIAYKKELAKCQQGGLGVNVCQNLLERYTAGGGAP*
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