mRNA_6471 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350397
Unique Name	mRNA_6471
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350397 vs. uniprot
Match: A0A835YR37_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR37_9STRA)

HSP 1 Score: 758 bits (1958), Expect = 2.060e-274
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 1

Query:    1 MVTALEEGGLREAADAVYADATARGALPDSVLDSDWEFDVSALPPAVARLKVRAVLRGVLAAARSXXXXXXAPAAEDLVFVCGTGVQRSVRGAHERRFDMRSYLSAVLATEYTPPLAAHTPPMQAGCIAVPRERVAAWIAAHIDGPHVGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGAKLEGTPRCVDARACVPRGQGTKGTTVPASAAALLLSNQLTAERALADEPDFETELPPLVTKALARYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMERDFYGPMRSLASALDDFGGEDLVAATVKLEAAMAALAVETAGRSQRGGGTTAAQEQRARQLWEDGRSALNSYASSLNRIWQQGGGRGDVLAAVAAEPAGDASSARRRYIAYKKELAKCQQGGLGVNVCQNLLERYTAGGGAP 1323
            MVTALEEGGLREAADAVYADATARGALPDSVLDSDWEFDVSALPPAVARLKVRAVLRGVLAAARSXXXXXXAPAAEDLVFVCGTGVQRSVRGAHERRFDMRSYLSAVLATEYTPPLAAHTPPMQAGCIAVPRERVAAWIAAHIDGPHVGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGAKLEGTPRCVDARACVPRGQGTKGTTVPASAAALLLSNQLTAERALADEPDFETELPPLVTKALARYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMERDFYGPMRSLASALDDFGGEDLVAATVKLEAAMAALAVETAGRSQRGGGTTAAQEQRARQLWEDGRSALNSYASSLNRIWQQGGGRGDVLAAVAAEPAGDASSARRRYIAYKKELAKCQQGGLGVNVCQNLLERYTAGGGAP
Sbjct:    1 MVTALEEGGLREAADAVYADATARGALPDSVLDSDWEFDVSALPPAVARLKVRAVLRGVLAAARSXXXXXXAPAAEDLVFVCGTGVQRSVRGAHERRFDMRSYLSAVLATEYTPPLAAHTPPMQAGCIAVPRERVAAWIAAHIDGPHVGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGAKLEGTPRCVDARACVPRGQGTKGTTVPASAAALLLSNQLTAERALADEPDFETELPPLVTKALARYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMERDFYGPMRSLASALDDFGGEDLVAATVKLEAAMAALAVETAGRSQRGGGTTAAQEQRARQLWEDGRSALNSYASSLNRIWQQGGGRGDVLAAVAAEPAGDASSARRRYIAYKKELAKCQQGGLGVNVCQNLLERYTAGGGAP 441

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BLAST of jgi.p|Trimin1|350397 vs. uniprot
Match: A0A0G4G2V7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G2V7_VITBC)

HSP 1 Score: 124 bits (310), Expect = 1.410e-28
Identity = 80/219 (36.53%), Postives = 121/219 (55.25%), Query Frame = 1

Query:  646 AAALLLSNQLTAERALADEPDFETELPPLVTKALARYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMERDFYGPMRSLASAL-DDFGGEDLVAATVKLEAAMAALAVETAGRSQRGGGTTAAQEQRARQLWEDGRSALNSYASSLNRIWQQGGGRGDVLAAVAAEPAGDASSARRRYIAYKKELAKCQQGGLGVNVCQNLLER 1299
            AAAL +SN L  + A+A EP   + +     K+  +Y P +  +GD+YLF++   +    NW  + +Q K+  + R  +VSRM+RDF+ PMR LA ++ +D GG DL   T + E++M  L     G    GG  T   ++ A+  WE GR  +N+Y    N++  +     +V        A D S  R +YI  KK LAKCQQGG+GVNVC ++L++
Sbjct:   72 AAALAVSNALLLDDAVAVEPPLPSSI-----KSFRQYAPQLQLSGDFYLFDLAEDIRT-SNWDDVLDQFKVSGSARFVSVSRMDRDFFSPMRLLAKSVPEDEGGSDLEQVTERFESSMRRLQSVAKGV---GGDVTKELKKEAQDAWESGRQDINTYMRLANQLIAE---PAEVAPFTLLPSASDDSPRRDKYIKIKKVLAKCQQGGVGVNVCGDVLKQ 278

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BLAST of jgi.p|Trimin1|350397 vs. uniprot
Match: A0A7S3BBV3_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BBV3_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 1.290e-8
Identity = 62/216 (28.70%), Postives = 100/216 (46.30%), Query Frame = 1

Query:  718 ELPPLVTKALARYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMERDFYGPMRSLASALD-DFGGEDLVAATVKLEAAMAALAVETAGRSQRGGGTTAAQEQRARQLWEDGRSALNSYASSLNRIWQQGGGRGDVLAAVAAEPAGDA-SSARRRYIAYKKELAKCQ-QGGLGV-NVCQNLLERYTAGGGAP*LGLRCMETY 1353
            ELPP    A  +  P++  A DY++FE++  V +P+ W ++   ++  + G   + S++ER F  PMR LA +   D GGE++  +    + A+  L  E   RS  GG  T      A   W+  R +LN +  ++N           +   V   P G     ++ RY   KK+ A CQ +GG  +  +  NL+    AG G    G+  + TY
Sbjct:   64 ELPPGAITAYNQNWPVIQLAADYFVFELRDQVADPQKWDLVGALMEGKSVGSAQSPSQIERRFILPMRVLALSFPPDAGGEEMQTSLNNFQKAVYRLGKEA--RSSPGGFETP-NPNAALGYWDAARQSLNEFLVAMNTAT-------GINRLVPIPPKGQGYPRSKARYTQLKKDSAICQNRGGEALAGIWGNLMVYGVAGTGVSPCGMS-LATY 268

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BLAST of jgi.p|Trimin1|350397 vs. uniprot
Match: A0A7S4QFH0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QFH0_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 5.140e-5
Identity = 39/143 (27.27%), Postives = 70/143 (48.95%), Query Frame = 1

Query:  703 PDFETELPPLVTKALARYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMERDFYGPMRSLASALDDFGGEDLVAATVKLEAAMAALAVETAG-RSQRGGGTTAAQEQRARQLWEDGRSALNSYASSLN 1128
            PDF +E      ++  +Y   +  + DYY++E++  + + + W  + +  ++         SR+ERDF  PMR L  ++D    + L  +    E AM+ ++  TAG R              A++ W++GR ALNS+  +LN
Sbjct:  110 PDFPSE----AVRSYLQYRGSLQISADYYIWELQEKMTDVDEWGEIGQLFRVNNNKGQGQPSRIERDFVNPMRILGLSMDPDVADSLRDSQFAFEKAMSKISKATAGYRRDLSVEIEPTAIPMAKEGWDEGRQALNSFFVTLN 248

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BLAST of jgi.p|Trimin1|350397 vs. uniprot
Match: D8LLG9_ECTSI (PPR_long domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG9_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 6.680e-5
Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 1

Query:    1 MVTALEEGGLREAADAVYADATARGALPDSVLDSDWEFDVSALPPAVARLKVRAVLRGVLAAARSXXXXXXAPAA-----EDLVFVCGTG 255
            ++++L + G  + A  V   A   GA+P S LDSD+E DVS LPPA+A++K R  L+ +L   R          A     EDLVFV GTG
Sbjct:  911 LISSLSDRGRWDDAQRVVEIAEKTGAIPASSLDSDFEVDVSQLPPAIAKVKARGTLQRILDVWRESSGNAEGGGATSSPLEDLVFVTGTG 1000

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350397 vs. uniprot

BLAST of jgi.p|Trimin1|350397 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A835YR37_9STRA	2.060e-274	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A0G4G2V7_VITBC	1.410e-28	36.53	Uncharacterized protein n=1 Tax=Vitrella brassicaf...	[more]
A0A7S3BBV3_9EUKA	1.290e-8	28.70	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]
A0A7S4QFH0_9STRA	5.140e-5	27.27	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]
D8LLG9_ECTSI	6.680e-5	41.11	PPR_long domain-containing protein n=2 Tax=Ectocar...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_62	contig	Contig_62:112971..116043 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350397\|estExt_Genemark1.C_Ctg_620019
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2ERQ7@1\|root,2SUFH@2759\|Eukaryota
Evalue	1.55e-12
Seed ortholog	2903.EOD33440
Hectar predicted targeting category	other localisation
TranscriptId	350719
Track	FilteredModels1
ProteinId	350397

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350397	gene_6471	Tribonema minus UTEX_B_3156	gene	Contig_62 112971..116043 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350397	Trimin1\|350397\|estExt_Genemark1.C_Ctg_620019	Tribonema minus UTEX_B_3156	polypeptide	Contig_62 113029..116043 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_6471_6	exon_6471_6	Tribonema minus UTEX_B_3156	exon	Contig_62 112971..113321 -
exon_6471_5	exon_6471_5	Tribonema minus UTEX_B_3156	exon	Contig_62 113830..114037 -
exon_6471_4	exon_6471_4	Tribonema minus UTEX_B_3156	exon	Contig_62 114306..114487 -
exon_6471_3	exon_6471_3	Tribonema minus UTEX_B_3156	exon	Contig_62 115058..115185 -
exon_6471_2	exon_6471_2	Tribonema minus UTEX_B_3156	exon	Contig_62 115323..115787 -
exon_6471_1	exon_6471_1	Tribonema minus UTEX_B_3156	exon	Contig_62 115994..116043 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_6471	UTR3_6471	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_62 112971..113028 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_6471	CDS_6471	Tribonema minus UTEX_B_3156	CDS	Contig_62 115994..116043 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_62:112971..116043-
coding sequence from alignment at Contig_62:112971..116043-

spliced messenger RNA

>mRNA_6471 ID=mRNA_6471|Name=jgi.p|Trimin1|350397|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1384bp|location=Sequence derived from alignment at Contig_62:112971..116043- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGACGGCGCTGGAGGAAGGCGGGCTGCGCGAGGCTGCGGACGCCGT
CTACGCCGACGCGACGGCGCGCGGCGCGCTGCCCGACAGCGTCCTCGACT
CGGACTGGGAGTTTGACGTCAGCGCGCTGCCGCCGGCGGTCGCGCGCCTC
AAGGTGCGCGCCGTGCTGCGCGGCGTGCTGGCGGCAGCGCGCAGCAGCGG
TGGTGGCGGCGCGGCGCCGGCGGCGGAGGACCTCGTCTTCGTGTGCGGCA
CGGGGGTGCAGCGCTCCGTGCGCGGCGCGCACGAGCGGCGCTTCGACATG
CGCTCGTACCTCTCTGCCGTGCTCGCGACGGAGTACACGCCGCCGCTCGC
CGCGCACACGCCGCCCATGCAGGCGGGCTGCATCGCCGTGCCGCGCGAGC
GCGTCGCCGCGTGGATCGCCGCGCACATCGACGGCCCGCACGTCGGCAGC
GGCGGCGCCGCCGCCGCCCCTGCTGCCGCTGCTGCGCCCAGCGGGCCCGC
CGCTACGGCGGCAGCGTCGCGTGCGGTCGTTCGCCTCTGCTGCGCTGCAG
CGGGGGCGAAGCTCGAAGGCACGCCGCGCTGCGTAGACGCGCGCGCGTGC
GTCCCGCGGGGTCAGGGCACAAAGGGCACCACGGTGCCCGCATCTGCTGC
AGCGCTGCTATTGAGTAACCAGCTGACCGCCGAGCGTGCTCTGGCGGATG
AGCCGGACTTCGAGACAGAACTGCCCCCTTTAGTCACGAAGGCCCTCGCA
AGATACGTGCCTCTCGTCTCTTTCGCTGGCGACTACTACCTGTTTGAGAT
GAAATCTGCTGTGGAAAACCCCGAGAACTGGTCGGTGCTGCAGGAGCAGG
TGAAGATGCCGGCGACGGGCCGCGTCGCCGCGGTGTCGCGCATGGAGCGC
GACTTCTACGGGCCGATGCGCTCCCTCGCGTCAGCGCTCGACGACTTTGG
CGGCGAGGACCTCGTGGCCGCCACCGTCAAGCTGGAGGCGGCCATGGCGG
CACTGGCGGTGGAGACCGCAGGCAGGTCTCAGCGCGGCGGCGGCACCACC
GCGGCCCAGGAGCAGCGCGCGCGGCAGCTCTGGGAGGACGGCCGCAGCGC
CCTCAACTCGTACGCGTCGAGCCTAAACCGCATCTGGCAGCAGGGCGGGG
GCAGGGGCGACGTGCTTGCGGCGGTGGCGGCGGAGCCTGCGGGCGATGCG
TCCAGCGCGAGGCGGCGCTACATTGCGTACAAGAAGGAGCTGGCCAAGTG
CCAGCAGGGGGGGCTGGGCGTGAATGTGTGCCAGAACTTGTTGGAGAGGT
ATACGGCGGGCGGCGGCGCACCGTGACTGGGGTTGCGTTGCATGGAGACT
TATGTCGGTCGGTTTGGGATTTATTACTCGTCGG

protein sequence of jgi.p|Trimin1|350397

>Trimin1|350397|estExt_Genemark1.C_Ctg_620019 ID=Trimin1|350397|estExt_Genemark1.C_Ctg_620019|Name=jgi.p|Trimin1|350397|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=442bp
MVTALEEGGLREAADAVYADATARGALPDSVLDSDWEFDVSALPPAVARL
KVRAVLRGVLAAARSSGGGGAAPAAEDLVFVCGTGVQRSVRGAHERRFDM
RSYLSAVLATEYTPPLAAHTPPMQAGCIAVPRERVAAWIAAHIDGPHVGS
GGAAAAPAAAAAPSGPAATAAASRAVVRLCCAAAGAKLEGTPRCVDARAC
VPRGQGTKGTTVPASAAALLLSNQLTAERALADEPDFETELPPLVTKALA
RYVPLVSFAGDYYLFEMKSAVENPENWSVLQEQVKMPATGRVAAVSRMER
DFYGPMRSLASALDDFGGEDLVAATVKLEAAMAALAVETAGRSQRGGGTT
AAQEQRARQLWEDGRSALNSYASSLNRIWQQGGGRGDVLAAVAAEPAGDA
SSARRRYIAYKKELAKCQQGGLGVNVCQNLLERYTAGGGAP*

mRNA from alignment at Contig_62:112971..116043-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6471 ID=mRNA_6471|Name=jgi.p|Trimin1|350397|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3073bp|location=Sequence derived from alignment at Contig_62:112971..116043- (Tribonema minus UTEX_B_3156 )
ATGGTGACGGCGCTGGAGGAAGGCGGGCTGCGCGAGGCTGCGGACGCCGT
GTGAGTAGCGCGCACACGCAGGCGTGGCGCAGCATTATGCAGATGGCCAT
CCATGTCACAAGCCCATTGTCTGTACGACCTTGTTGCCCGGGCCAGTCCG
TAGATGCGCGTCAACCTATAACTGATGGTAATGTCCTGTGACTCTGTGTC
AATTCAACATGGATCTGACGGAGTGCCTCTCCGACCGCATGCCGTCTGCA
CCGCAGCTACGCCGACGCGACGGCGCGCGGCGCGCTGCCCGACAGCGTCC
TCGACTCGGACTGGGAGTTTGACGTCAGCGCGCTGCCGCCGGCGGTCGCG
CGCCTCAAGGTGCGCGCCGTGCTGCGCGGCGTGCTGGCGGCAGCGCGCAG
CAGCGGTGGTGGCGGCGCGGCGCCGGCGGCGGAGGACCTCGTCTTCGTGT
GCGGCACGGGGGTGCAGCGCTCCGTGCGCGGCGCGCACGAGCGGCGCTTC
GACATGCGCTCGTACCTCTCTGCCGTGCTCGCGACGGAGTACACGCCGCC
GCTCGCCGCGCACACGCCGCCCATGCAGGCGGGCTGCATCGCCGTGCCGC
GCGAGCGCGTCGCCGCGTGGATCGCCGCGCACATCGACGGCCCGCACGTC
GGCAGCGGCGGCGCCGCCGCCGCCCCTGCTGCCGCTGCTGCGCCCAGCGG
GCCCGCCGCTACGGCGGCAGCGTAGTGCGCGGCGCATGCGCGGCGCGGCG
GCGTCGCAATGCGGGGGGGGGTCGCCCGCGCCCCGCCCGCGCCCCCCCCG
GCGGTTGCTCGATTGTACCGCGGCAAGCGTGGGCTTGCGCCTGTGCGCCT
GGGACGAGGTCGCGTGCGGTCGTTCGCCTCTGCTGCGCTGCAGCGGGGGC
GAAGCTCGAAGGCACGCCGCGCTGCGTAGACGCGCGCGCGTGCGTCCCGC
GGGGTCAGGGCACAAAGGGCACCACGGTGCCCGCATGTAGCTGGCACGGC
ATTGCATGGCGCAATGCGTAGAGCTGTTGACGTTTTCCGGCACAATGCCG
TTGGGCTCTGAGGGTGCTGGGCGCATCGGTCTGTGACCTCTTGGTGCCAC
ATGAGCCCGGCCCCTGTTGAGCTATGTAGCTGCAAGGGGGGAGTCGGGGG
GCGTCCGCCTGTCTAGGTGTCGGTTTAACACCTGCTGTTTGACAGACTGA
CTCTGATGATCACACATACAAAGGACACCTGGCTCATACTTAACCATCAT
AATAAAAAACACACAAGTTCGCGGTCTACGTTTTTTTTCTTTTGAAAAAT
TCTCTGGAACTTCCCAAGTTGAAGTTGTTGTGTTGAACCTTTTTTCTTGC
TCTTGCGCGCAACATGAGCAGGAGTGCTGTGCTGCTTCTTATAGCAGTGC
TACTGGCTCACAATGTGAATGCATTTACGCTGCCGCCAGCATCACGTGCT
GCTCGATGCAGAAGGCATGCCGCAACACCAAGTCAAGAAGGTGGCAGTGA
CAGCAAAGCCACAGTGGCAGTGTGCCGCAGACGAGTGCTCGCCTCTGCCG
CTTCAGCTGCTGCAGCGCTGCTATTGAGTAACCAGCTGACCGCCGAGCGT
GCTCTGGCGGATGAGCCGGACTTCGAGACAGAACTGCCCCCTTTAGTCAC
GAAGGCCCTCGCAAGATACGTGCCTCTCGTCTCTTTCGCTGGCGACTACT
ACCTGTTTGAGATGAAATCTGCTGTGGAAAACCCCGAGGTGAGTCCCATT
CAGAGAGTGCGGCAGTGGTCATCACGCAAGTGTGCCCGCAGCAGCAGGAA
CGTGAGCAAAAACCTAGCTTGCCCCACCCCACCTCTTTGCAGTTCTGCAT
GGCATGATGCAGCTACAGGCACTCACGTTGACATGCTCACGCCTACATAG
GCCTTCCCAAAACACCGCCGTGTCACTGCGGACGTGTGCCCGCACTCACA
AACCCAAACACACGACGCTCCACCACAACCTCATGCCTCGCGTGTGTGCG
TCGCAGAACTGGTCGGTGCTGCAGGAGCAGGTGAAGATGCCGGCGACGGG
CCGCGTCGCCGCGGTGTCGCGCATGGAGCGCGACTTCTACGGGCCGATGC
GCTCCCTCGCGTCAGCGCTCGACGACTTTGGCGGCGAGGACCTCGTGGCC
GCCACCGTCAAGCTGGAGGCGGCCATGGCGGCACTGGCGGTGGAGACCGC
AGGCAGGTCTCAGCGTCTATTGAGGCTGTTTGTGTTTACCTGTGTGTGCA
TGTAGCACGCGCATAGGCAGCAAGCTTGTCGGGACTACTAAGGCTTAATT
GTGTACATGGCGCACACGTTGTGCGTGCATGCGCTGGTGGGGGGGGCTTG
CAGTGCGCCATGCTGTTGGCGATGGTGTTGTGTCAGAAGCCAGCAGGGCC
GAGAAGATGGGACGTCTTTATTTTGGGAGGCCTCATTTGAGCTATTATGT
GTGTTCACGGAATGGAGCTGCAAGCTGCGTGCAAATACATCGATTCACAC
AACACCCAGCAGACCGAACCGAACGCAAGCAGACACACACACGTTCACAC
AGCGCAGCGCAACAACTAAATAGCAAATGTCGCACCCCTTTGCATACATA
ACGAGTGTTTACGACCACCTACGCGGGCAGTCCTGCAGAGTTCCACTCAC
GCCTCATGTCCTACTGCACACACCGCTGATGCCCTAACCCTAACCCTAAC
CCCAACTGTCTGCGGCGCGCAGGCGGCGGCGGCACCACCGCGGCCCAGGA
GCAGCGCGCGCGGCAGCTCTGGGAGGACGGCCGCAGCGCCCTCAACTCGT
ACGCGTCGAGCCTAAACCGCATCTGGCAGCAGGGCGGGGGCAGGGGCGAC
GTGCTTGCGGCGGTGGCGGCGGAGCCTGCGGGCGATGCGTCCAGCGCGAG
GCGGCGCTACATTGCGTACAAGAAGGAGCTGGCCAAGTGCCAGCAGGGGG
GGCTGGGCGTGAATGTGTGCCAGAACTTGTTGGAGAGGTATACGGCGGGC
GGCGGCGCACCGTGACTGGGGTTGCGTTGCATGGAGACTTATGTCGGTCG
GTTTGGGATTTATTACTCGTCGG

Coding sequence (CDS) from alignment at Contig_62:112971..116043-

>mRNA_6471 ID=mRNA_6471|Name=jgi.p|Trimin1|350397|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1326bp|location=Sequence derived from alignment at Contig_62:112971..116043- (Tribonema minus UTEX_B_3156 )
ATGGTGACGGCGCTGGAGGAAGGCGGGCTGCGCGAGGCTGCGGACGCCGT
CTACGCCGACGCGACGGCGCGCGGCGCGCTGCCCGACAGCGTCCTCGACT
CGGACTGGGAGTTTGACGTCAGCGCGCTGCCGCCGGCGGTCGCGCGCCTC
AAGGTGCGCGCCGTGCTGCGCGGCGTGCTGGCGGCAGCGCGCAGCAGCGG
TGGTGGCGGCGCGGCGCCGGCGGCGGAGGACCTCGTCTTCGTGTGCGGCA
CGGGGGTGCAGCGCTCCGTGCGCGGCGCGCACGAGCGGCGCTTCGACATG
CGCTCGTACCTCTCTGCCGTGCTCGCGACGGAGTACACGCCGCCGCTCGC
CGCGCACACGCCGCCCATGCAGGCGGGCTGCATCGCCGTGCCGCGCGAGC
GCGTCGCCGCGTGGATCGCCGCGCACATCGACGGCCCGCACGTCGGCAGC
GGCGGCGCCGCCGCCGCCCCTGCTGCCGCTGCTGCGCCCAGCGGGCCCGC
CGCTACGGCGGCAGCGTCGCGTGCGGTCGTTCGCCTCTGCTGCGCTGCAG
CGGGGGCGAAGCTCGAAGGCACGCCGCGCTGCGTAGACGCGCGCGCGTGC
GTCCCGCGGGGTCAGGGCACAAAGGGCACCACGGTGCCCGCATCTGCTGC
AGCGCTGCTATTGAGTAACCAGCTGACCGCCGAGCGTGCTCTGGCGGATG
AGCCGGACTTCGAGACAGAACTGCCCCCTTTAGTCACGAAGGCCCTCGCA
AGATACGTGCCTCTCGTCTCTTTCGCTGGCGACTACTACCTGTTTGAGAT
GAAATCTGCTGTGGAAAACCCCGAGAACTGGTCGGTGCTGCAGGAGCAGG
TGAAGATGCCGGCGACGGGCCGCGTCGCCGCGGTGTCGCGCATGGAGCGC
GACTTCTACGGGCCGATGCGCTCCCTCGCGTCAGCGCTCGACGACTTTGG
CGGCGAGGACCTCGTGGCCGCCACCGTCAAGCTGGAGGCGGCCATGGCGG
CACTGGCGGTGGAGACCGCAGGCAGGTCTCAGCGCGGCGGCGGCACCACC
GCGGCCCAGGAGCAGCGCGCGCGGCAGCTCTGGGAGGACGGCCGCAGCGC
CCTCAACTCGTACGCGTCGAGCCTAAACCGCATCTGGCAGCAGGGCGGGG
GCAGGGGCGACGTGCTTGCGGCGGTGGCGGCGGAGCCTGCGGGCGATGCG
TCCAGCGCGAGGCGGCGCTACATTGCGTACAAGAAGGAGCTGGCCAAGTG
CCAGCAGGGGGGGCTGGGCGTGAATGTGTGCCAGAACTTGTTGGAGAGGT
ATACGGCGGGCGGCGGCGCACCGTGA