Trimin1|142835|gw1.1.159.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|142835
Unique NameTrimin1|142835|gw1.1.159.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length137
Homology
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A835ZKV5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKV5_9STRA)

HSP 1 Score: 266 bits (680), Expect = 4.240e-90
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 137
            RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL
Sbjct:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 137          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A6H5KP27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP27_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 2.400e-55
Identity = 98/137 (71.53%), Postives = 120/137 (87.59%), Query Frame = 0
Query:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 137
            RRRS I ETA++L+ALVKQ V+TLAFCRTRKLTEL L+Y  +DLE +AP LV  V+GYRGGYTK +RR+IEG LF+ KLLGVTAT ALELG+D+G+LDVT+HLG+PGSVSSL QQAGRAGRGG++SLAI+++F  P+
Sbjct:  864 RRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQLVPLVQGYRGGYTKDERRKIEGSLFANKLLGVTATCALELGVDIGELDVTLHLGFPGSVSSLRQQAGRAGRGGKDSLAIMVLFQDPI 1000          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A7R9UET8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UET8_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.040e-54
Identity = 93/135 (68.89%), Postives = 112/135 (82.96%), Query Frame = 0
Query:    3 RSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 137
            RS+IVETA V +AL+KQ VRTLAFCR RKL ELVL+Y  +DL  +AP L   V+GYRGGY+K +RREIE +LF GKLLGVTA++ALELG+D+G LDVT+HLG+PGS+SSL QQ GRAGR G  SLAI+I+F SPL
Sbjct:  165 RSAIVETAMVFTALIKQRVRTLAFCRVRKLVELVLRYSLQDLAATAPRLARRVRGYRGGYSKAERREIEAQLFGGKLLGVTASNALELGVDIGSLDVTVHLGFPGSISSLRQQMGRAGRTGGQSLAIIILFPSPL 299          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: D8LLG5_ECTSI (DEAD/DEAH box helicase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG5_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 3.000e-54
Identity = 96/137 (70.07%), Postives = 119/137 (86.86%), Query Frame = 0
Query:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 137
            RRRS I ETA++L+ALVKQ V+TLAFCRTRKLTEL L+Y  +DL  +AP +V  V+GYRGGYTK +RR+IEG LF+ KLLGVTAT ALELG+D+G+LDVT+HLG+PGSVSSL QQAGRAGRGG++SLAI+++F  P+
Sbjct:  484 RRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLGKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKLLGVTATCALELGVDIGELDVTLHLGFPGSVSSLRQQAGRAGRGGKDSLAIMVLFQDPI 620          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A7S1UKF1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKF1_9STRA)

HSP 1 Score: 182 bits (462), Expect = 3.820e-51
Identity = 90/137 (65.69%), Postives = 112/137 (81.75%), Query Frame = 0
Query:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 137
            R RS+IVETA + +AL+KQ VRTLAFCR RKL ELVL+Y  +DL  +AP L + V+GYRGGY+K DRREIE +LF G LLGVTA+SALELG+D+G LD T+HLG+PGS+S L QQ GRAGR GR S+A++++F SPL
Sbjct:  160 RPRSAIVETAMLFTALIKQRVRTLAFCRVRKLVELVLRYSLQDLAATAPRLAQRVRGYRGGYSKKDRREIERRLFGGDLLGVTASSALELGVDIGSLDATLHLGFPGSISGLRQQMGRAGRSGRPSMAVVVLFQSPL 296          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A7S2AHE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AHE3_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.030e-49
Identity = 82/121 (67.77%), Postives = 99/121 (81.82%), Query Frame = 0
Query:   17 VKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 137
            VK+ VRT+AF RTRKLTELVL+Y  +DL  +AP LV+ VK YRGGYTK DRR IE +LF G+LLGV AT ALELG+D+G LD T+H+G+P  +SSLWQQAGRAGR GR SLA+++ FDSPL
Sbjct:    1 VKRRVRTIAFSRTRKLTELVLRYTLQDLTATAPGLVKFVKSYRGGYTKEDRRAIEAQLFQGQLLGVAATCALELGVDIGGLDATLHVGFPSPLSSLWQQAGRAGRSGRRSLAVVVAFDSPL 121          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: F2TYE6_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TYE6_SALR5)

HSP 1 Score: 174 bits (441), Expect = 8.250e-48
Identity = 87/134 (64.93%), Postives = 110/134 (82.09%), Query Frame = 0
Query:    4 SSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 137
            S+I++ A +LSALVKQHVRTLAF + RK+TELVLKY   DL+ +AP LV  VK YR GYTK +RR IE  LF+GK+LG TAT+ALELG+D+G LD TI LG+PGS++S+WQQAGR+GRG  ++L ILI+F+SPL
Sbjct:  694 SAILQAALILSALVKQHVRTLAFAKVRKVTELVLKYTRHDLKHTAPQLVARVKSYRAGYTKEERRAIERALFAGKILGTTATNALELGVDIGSLDATILLGFPGSIASMWQQAGRSGRGTHDALTILILFNSPL 827          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A7C9DFS4_OPUST (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DFS4_OPUST)

HSP 1 Score: 157 bits (397), Expect = 7.130e-47
Identity = 75/134 (55.97%), Postives = 104/134 (77.61%), Query Frame = 0
Query:    4 SSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 137
            S I+E + +L+ +V+  +R++AFC+TRKL ELVL Y  E L+ + PHL++++  YR GY   DRR IE + FSGKL G+ AT+ALELGID+G +DVT+HLG+PGSV+SLWQQAGR+GR G+ SLA+ + F+ PL
Sbjct:    4 SPILEVSLLLAEMVQHGLRSIAFCKTRKLCELVLSYTREILQDTTPHLMDSICAYRAGYVPEDRRRIESEFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSVASLWQQAGRSGRRGKPSLAVYVAFEGPL 137          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A0J8CFE5_BETVV (Uncharacterized protein n=3 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8CFE5_BETVV)

HSP 1 Score: 162 bits (410), Expect = 1.230e-43
Identity = 79/137 (57.66%), Postives = 107/137 (78.10%), Query Frame = 0
Query:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 137
            +R S I+E +R+L+ +V+  +R++AFC+TRKL ELVL Y  E L+ +APHLV ++  YR GY   DRR IE + FSGKL G+ ATSALELGID+G +DVT+HLG+PGS++SLWQQAGR+GR G+ SLA+ + F+ PL
Sbjct:  695 KRSSPILEVSRLLAEMVQHGLRSIAFCKTRKLCELVLSYTHEVLQDTAPHLVNSICAYRAGYIAEDRRRIESEFFSGKLRGIAATSALELGIDVGHVDVTLHLGFPGSIASLWQQAGRSGRRGKPSLAVYVAFEGPL 831          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: UPI000B76DBD5 (uncharacterized protein LOC110722235 n=4 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B76DBD5)

HSP 1 Score: 161 bits (408), Expect = 2.290e-43
Identity = 77/137 (56.20%), Postives = 106/137 (77.37%), Query Frame = 0
Query:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 137
            +R S I+E +++ + +V+  +R +AFC+TRKL E+VL Y  E L+ +APHL +++  YRGGY   DRR IE + FSGKL G+ AT+ALELGID+G +DVT+HLG+PGS+SSLWQQAGR+GR G+ SLA+ + FD PL
Sbjct:  693 KRSSPILEVSQLFAEMVQHGLRCIAFCKTRKLCEVVLSYTHEILQDTAPHLTDSICAYRGGYVAEDRRRIESEFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSISSLWQQAGRSGRRGKPSLAVYVAFDGPL 829          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZKV5_9STRA4.240e-90100.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5KP27_9PHAE2.400e-5571.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9UET8_9STRA1.040e-5468.89Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
D8LLG5_ECTSI3.000e-5470.07DEAD/DEAH box helicase domain-containing protein n... [more]
A0A7S1UKF1_9STRA3.820e-5165.69Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2AHE3_9STRA2.030e-4967.77Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
F2TYE6_SALR58.250e-4864.93Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A7C9DFS4_OPUST7.130e-4755.97Helicase C-terminal domain-containing protein (Fra... [more]
A0A0J8CFE5_BETVV1.230e-4357.66Uncharacterized protein n=3 Tax=Beta vulgaris subs... [more]
UPI000B76DBD52.290e-4356.20uncharacterized protein LOC110722235 n=4 Tax=Cheno... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 45..123
e-value: 1.1E-11
score: 54.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 15..123
e-value: 7.5E-13
score: 48.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 8..137
score: 12.943856
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..136
e-value: 2.7E-23
score: 84.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..134
NoneNo IPR availablePANTHERPTHR47957:SF3ATP-DEPENDENT HELICASE HRQ1coord: 1..137
NoneNo IPR availablePANTHERPTHR47957ATP-DEPENDENT HELICASE HRQ1coord: 1..137
NoneNo IPR availableCDDcd18797SF2_C_Hrqcoord: 2..131
e-value: 3.96445E-62
score: 185.153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:227518..229645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|142835mRNA_955Tribonema minus UTEX_B_3156 mRNAContig_1 227518..229645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|142835|gw1.1.159.1 ID=Trimin1|142835|gw1.1.159.1|Name=jgi.p|Trimin1|142835|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=137bp
RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPH
LVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVT
IHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase